IPC AT short_description Curator_summary Computational_description Ipc11G0004160 AT1G72240.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004170 AT2G02850.1 plantacyanin Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil. plantacyanin;(source:Araport11) Ipc11G0004180 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc11G0004190 AT4G40060.1 homeobox protein 16 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 16;(source:Araport11) Ipc11G0004200 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004240 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0004250 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0004260 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0004270 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc11G0004280 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc11G0004290 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc11G0004300 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0004310 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0004320 #N/A #N/A #N/A #N/A Ipc11G0004330 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0004340 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004350 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0004360 AT1G68310.1 Protein of unknown function (DUF59) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized. Required for both leaf adaxial–abaxial polarity formation and normal cell proliferation. It is part of a protein complex with CIA1, NAR1, and MET18, which are highly conserved in eukaryotes and are involved in the biogenesis of cytosolic and nuclear Fe-S proteins. MIP18 family protein (DUF59);(source:Araport11) Ipc11G0004370 AT4G02220.1 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein 0 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein;(source:Araport11) Ipc11G0004380 AT3G25210.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0004390 AT4G31630.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc11G0004400 AT1G53380.5 0 0 hypothetical protein (DUF641);(source:Araport11) Ipc11G0004410 AT2G19880.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes Glucosylceramide synthase (GCS) which catalyzes the final step in glucosylceramide (GlcCer) synthesis by transferring a glucosyl residue from UDP-Glc to the ceramide backbone. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc11G0004420 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004430 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0004440 AT1G68180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0004450 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0004460 #N/A #N/A #N/A #N/A Ipc11G0004470 AT5G44940.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc11G0004480 AT3G19950.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0004490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004500 AT5G17847.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004510 AT1G08750.3 Peptidase C13 family GPI8/PIG-K homolog involved in stomata development. Loss of function alleles do not transmit through the pollen. Peptidase C13 family;(source:Araport11) Ipc11G0004520 AT3G19950.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0004530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004540 AT4G33320.1 Plant protein of unknown function (DUF641) 0 myosin-4 protein (DUF641);(source:Araport11) Ipc11G0004550 AT1G35190.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc11G0004560 AT2G19930.3 0 0 RNA-dependent RNA polymerase family protein;(source:Araport11) Ipc11G0004570 AT1G66560.1 WRKY DNA-binding protein 64 member of WRKY Transcription Factor; Group III WRKY DNA-binding protein 64;(source:Araport11) Ipc11G0004580 AT2G19920.2 0 0 RNA-dependent RNA polymerase family protein;(source:Araport11) Ipc11G0004590 AT5G64500.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc11G0004600 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc11G0004610 AT2G16880.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0004620 AT3G25250.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Arabidopsis protein kinase The mRNA is cell-to-cell mobile. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc11G0004630 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0004640 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc11G0004650 AT2G19950.2 golgin candidate 1 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein. golgin Putative 1;(source:Araport11) Ipc11G0004660 AT4G29110.1 0 0 cotton fiber protein;(source:Araport11) Ipc11G0004670 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0004680 AT5G54750.2 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc11G0004690 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc11G0004700 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc11G0004710 AT2G31865.3 0 0 poly(ADP-ribose) glycohydrolase 2;(source:Araport11) Ipc11G0004720 AT3G02760.2 0 0 Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc11G0004730 AT4G13300.1 terpenoid synthase 13 Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding. terpenoid synthase 13;(source:Araport11) Ipc11G0004740 AT3G25820.4 0 Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc11G0004750 AT3G47910.2 Ubiquitin carboxyl-terminal hydrolase-related protein 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc11G0004760 AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein Encodes a sesterterpene synthase responsible for the biosynthesis of the tricyclic sesterterpene (+)-thalianatriene with a 11-6-5 fused ring system. Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc11G0004770 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004780 AT5G61330.3 0 0 rRNA processing protein-like protein;(source:Araport11) Ipc11G0004790 AT2G31840.2 0 0 Thioredoxin superfamily protein;(source:Araport11) Ipc11G0004800 AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc11G0004810 AT4G09060.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004820 AT4G09030.1 arabinogalactan protein 10 Encodes arabinogalactan protein (AGP10). The mRNA is cell-to-cell mobile. arabinogalactan protein 10;(source:Araport11) Ipc11G0004830 AT1G35220.6 0 0 FAM91 carboxy-terminus protein;(source:Araport11) Ipc11G0004840 AT1G35220.3 0 0 FAM91 carboxy-terminus protein;(source:Araport11) Ipc11G0004850 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0004860 AT5G02390.2 Protein of unknown function (DUF3741) Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc11G0004870 AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0004880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004910 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0004920 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc11G0004930 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0004940 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0004950 AT1G77340.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0004960 AT4G16740.1 terpene synthase 03 Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity. terpene synthase 03;(source:Araport11) Ipc11G0004970 AT1G31950.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc11G0004980 AT5G19740.1 Peptidase M28 family protein LAMP is an AMP paralog that overlaps in expression within the vascular system. Along with LAMP it suppresses meristem activity within the peripheral zone of the shoot apical meristem. LAMP is localized to the endoplasmic reticulum. Peptidase M28 family protein;(source:Araport11) Ipc11G0004990 AT5G56550.1 oxidative stress 3 Encodes OXIDATIVE STRESS 3 (OXS3), involved in tolerance to heavy metals and oxidative stress. oxidative stress 3;(source:Araport11) Ipc11G0005000 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0005010 AT4G32180.3 pantothenate kinase 2 Encodes a protein with pantothenate kinase activity. pantothenate kinase 2;(source:Araport11) Ipc11G0005020 AT3G05550.1 Hypoxia-responsive family protein 0 Hypoxia-responsive family protein;(source:Araport11) Ipc11G0005030 AT5G38920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0005040 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc11G0005050 AT3G56210.4 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc11G0005060 AT2G40430.1 0 Encodes a homolog of yeast NOP53 that is an important regulator of cell division during organ growth. Nop53 protein;(source:Araport11) Ipc11G0005070 AT2G40430.1 0 Encodes a homolog of yeast NOP53 that is an important regulator of cell division during organ growth. Nop53 protein;(source:Araport11) Ipc11G0005080 AT1G27170.2 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc11G0005090 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc11G0005100 AT5G18590.2 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc11G0005110 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005120 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0005130 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0005140 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc11G0005150 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0005160 AT3G12810.2 0 Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc11G0005170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005180 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0005190 AT2G20420.1 ATP citrate lyase (ACL) family protein 0 ATP citrate lyase (ACL) family protein;(source:Araport11) Ipc11G0005200 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0005210 AT1G04990.6 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc11G0005220 AT1G47710.1 Serine protease inhibitor (SERPIN) family protein 0 Serine protease inhibitor (SERPIN) family protein;(source:Araport11) Ipc11G0005230 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc11G0005240 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0005250 AT4G29140.1 MATE efflux family protein Encodes Activated Disease Susceptibility 1 (ADS1), a putative MATE (multidrug and toxic compound extrusion) transport protein that negatively regulates plant disease resistance. MATE efflux family protein;(source:Araport11) Ipc11G0005260 AT5G64830.1 programmed cell death 2 C-terminal domain-containing protein 0 programmed cell death 2 C-terminal domain-containing protein;(source:Araport11) Ipc11G0005270 AT3G20300.1 Protein of unknown function (DUF3537) 0 extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11) Ipc11G0005280 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc11G0005290 #N/A #N/A #N/A #N/A Ipc11G0005300 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0005310 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005320 AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc11G0005330 AT1G69870.1 nitrate transporter 1.7 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile. nitrate transporter 1.7;(source:Araport11) Ipc11G0005350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005360 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0004620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005370 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0005380 AT3G15359.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005390 #N/A #N/A #N/A #N/A Ipc11G0005400 AT1G53030.1 Cytochrome C oxidase copper chaperone (COX17) encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots. Cytochrome C oxidase copper chaperone (COX17);(source:Araport11) Ipc11G0005410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0005420 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0005430 AT4G26260.2 myo-inositol oxygenase 4 Encodes a myo-inositol oxygenase. myo-inositol oxygenase 4;(source:Araport11) Ipc11G0005440 #N/A #N/A #N/A #N/A Ipc11G0005450 AT2G34680.1 Outer arm dynein light chain 1 protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc11G0005460 AT1G01070.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0005470 AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc11G0005480 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc11G0005490 AT4G14050.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0005500 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005510 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0005520 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0005530 #N/A #N/A #N/A #N/A Ipc11G0005540 AT5G04370.3 0 A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid to yield methyl nicotinate. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0005550 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005560 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0005570 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc11G0005580 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005590 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005600 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005610 AT5G08650.2 0 0 Small GTP-binding protein;(source:Araport11) Ipc11G0005620 AT4G29230.2 0 0 NAC domain containing protein 75;(source:Araport11) Ipc03G0001280 AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. UVR8 interaction with COP1 is negatively regulated by RUP1 and RUP2. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc03G0001290 AT4G08180.4 0 0 OSBP(oxysterol binding protein)-related protein 1C;(source:Araport11) Ipc03G0001300 AT5G35370.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc03G0001310 AT1G71250.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc03G0001320 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc03G0001330 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001340 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000520 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001350 AT1G77810.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc03G0001360 AT3G47180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0001370 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc03G0001380 AT4G05360.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0001390 AT2G36720.2 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc03G0001400 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0001410 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc03G0001420 AT3G16270.3 0 0 ENTH/VHS family protein;(source:Araport11) Ipc03G0001430 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc03G0001440 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0001450 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001460 #N/A #N/A #N/A #N/A Ipc03G0001470 AT3G57180.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a chloroplast localized protein YL1/BPG2. Involved in seedling shoot response to salt stress through ABI4. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0001480 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc03G0001490 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc03G0001500 AT5G08630.3 0 0 DDT domain-containing protein;(source:Araport11) Ipc03G0001510 AT1G64180.1 intracellular protein transport protein USO1-related 0 intracellular protein transport protein USO1-like protein;(source:Araport11) Ipc03G0001520 AT5G63620.1 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes an oxidoreductase involved in transducing the perception of E-2-hexenal, which changes the redox status of the mitochondria. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc03G0001530 AT5G63640.2 0 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc03G0001540 AT5G43990.15 0 Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc03G0001550 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0001560 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001570 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0001580 AT4G00060.2 0 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc03G0001590 AT5G63660.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc03G0001600 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001610 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001620 AT5G63660.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc03G0001630 AT4G38620.1 myb domain protein 4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile. myb domain protein 4;(source:Araport11) Ipc03G0001640 AT1G47570.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0001650 AT5G50930.1 Histone superfamily protein Encodes a protein with similarity to mammalian MHF1 that acts in the same pathway as FANCM to restrain class II meiotic crossing over, and acts with FANCM during meiosis and to repair cross-links. It also assumes an opposing role from FANCM in homologous recombination and only FANCM is essential for replicative repair in the absence of the endonuclease MUS81. Histone superfamily protein;(source:Araport11) Ipc03G0001660 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc03G0001670 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001680 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc03G0001690 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc03G0001700 AT4G08990.1 DNA (cytosine-5-)-methyltransferase family protein 0 DNA (cytosine-5-)-methyltransferase family protein;(source:Araport11) Ipc03G0001710 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0001720 AT3G54360.2 0 Encodes a catalase chaperon that is essential for catalase activity. Required for multiple stress responses. zinc ion binding protein;(source:Araport11) Ipc03G0001730 AT4G38160.4 0 Encodes a member of the mitochondrial transcription termination factor family. MTERF6 is localized to both the mitochondria and chloroplast. It is required for ILE tRNA maturation during chloroplast development. Loss of function of MTERF6 results in plants with defective chloroplasts or reduced rate of photosynthesis when MTERF6 expression is low. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc03G0001740 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc03G0001750 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001760 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc03G0001770 AT2G32170.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0001780 AT4G24290.3 0 0 MAC/Perforin domain-containing protein;(source:Araport11) Ipc03G0001790 AT5G23630.1 phosphate deficiency response 2 A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots. phosphate deficiency response 2;(source:Araport11) Ipc03G0001800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001820 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001830 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc03G0001840 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001850 AT2G36650.1 0 0 CHUP1-like protein;(source:Araport11) Ipc03G0001860 AT5G45200.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc03G0001870 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0001880 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0001890 AT5G27220.3 0 0 Frigida-like protein;(source:Araport11) Ipc03G0001900 AT1G44020.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc03G0001910 AT1G48850.1 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative 0 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase;(source:Araport11) Ipc03G0001920 AT5G44150.1 0 0 phosphorelay protein;(source:Araport11) Ipc03G0001930 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0015100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001940 AT4G09570.1 calcium-dependent protein kinase 4 Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 4;(source:Araport11) Ipc03G0001950 AT1G32010.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc03G0001960 AT4G37110.1 Zinc-finger domain of monoamine-oxidase A repressor R1 0 Zinc-finger domain of monoamine-oxidase A repressor R1;(source:Araport11) Ipc03G0001970 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001980 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001990 AT5G23570.4 0 Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an Primeunknown Prime protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.The mRNA is cell-to-cell mobile. XS domain-containing protein / XS zinc finger domain-containing protein-like protein;(source:Araport11) Ipc03G0002000 AT5G23570.3 0 Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an Primeunknown Prime protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.The mRNA is cell-to-cell mobile. XS domain-containing protein / XS zinc finger domain-containing protein-like protein;(source:Araport11) Ipc03G0002020 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc03G0002010 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc03G0002030 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc03G0002040 AT1G67260.3 0 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc03G0002050 AT5G58760.2 0 Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity. damaged DNA binding 2;(source:Araport11) Ipc03G0002060 AT3G13222.1 GBF-interacting protein 1 Encodes a protein that binds to G-box binding transcription factors and enhances their binding affinities to G-box in vitro. This protein localizes to the nucleus and is expressed predominantly in the root. GBF-interacting protein 1;(source:Araport11) Ipc03G0002070 AT5G08500.1 Transmembrane CLPTM1 family protein 0 Transmembrane CLPTM1 family protein;(source:Araport11) Ipc03G0002080 AT1G10180.1 0 0 LOW protein: exocyst complex component-like protein;(source:Araport11) Ipc03G0002090 AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0002100 AT1G14440.2 homeobox protein 31 0 homeobox protein 31;(source:Araport11) Ipc03G0002110 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc03G0002120 AT1G01550.2 Protein of unknown function (DUF793) Encodes a protein with no functionally characterized domains that to prevent the synthesis of a novel substance that moves from the root to the shoot, where it modifies shoot growth by interfering with auxin signaling. Synthesis and delivery of this substance requires neither phloem nor endodermis. BPS1-like protein (DUF793);(source:Araport11) Ipc03G0002130 AT1G12710.1 phloem protein 2-A12 This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities. phloem protein 2-A12;(source:Araport11) Ipc03G0002140 AT5G18420.1 0 0 CCR4-NOT transcription complex subunit;(source:Araport11) Ipc03G0002150 AT5G16690.1 origin recognition complex subunit 3 Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b. origin recognition complex subunit 3;(source:Araport11) Ipc03G0002160 AT5G09970.1 cytochrome P450, family 78, subfamily A, polypeptide 7 member of CYP78A cytochrome P450, family 78, subfamily A, polypeptide 7;(source:Araport11) Ipc03G0002170 AT3G09110.1 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc03G0002180 AT5G23530.1 carboxyesterase 18 0 carboxyesterase 18;(source:Araport11) Ipc03G0002190 AT5G58100.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0002200 AT5G49160.1 methyltransferase 1 Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation. The mRNA is cell-to-cell mobile. methyltransferase 1;(source:Araport11) Ipc03G0002210 AT2G07200.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc03G0002220 AT5G23520.2 0 0 smr (Small MutS Related) domain-containing protein;(source:Araport11) Ipc03G0002230 AT4G11830.4 0 Encodes one of three phospholipase D enzymes of the gamma class. phospholipase D gamma 2;(source:Araport11) Ipc03G0002240 AT5G35970.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0002250 AT5G17560.1 BolA-like family protein 0 BolA-like family protein;(source:Araport11) Ipc03G0002260 AT1G02660.1 alpha/beta-Hydrolases superfamily protein PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0002270 AT1G64860.1 sigma factor A Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme sigma factor A;(source:Araport11) Ipc03G0001270 AT4G09680.4 0 Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance. conserved telomere maintenance component 1;(source:Araport11) Ipc03G0001260 AT5G63840.2 0 radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme. Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc03G0001250 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0001240 AT1G16825.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc03G0001230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001220 AT3G52430.1 alpha/beta-Hydrolases superfamily protein Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. Required for the ssi2-dependent heightened resistance to GPA. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0001210 AT2G01170.1 bidirectional amino acid transporter 1 Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys, GABA but not pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue. bidirectional amino acid transporter 1;(source:Araport11) Ipc03G0001200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001190 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0001180 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0001170 AT3G21650.2 0 Encodes protein phosphatase 2A (PP2A) B Primezeta subunit. Targeted to mitochondria. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc03G0001160 ATMG00830.1 cytochrome C biogenesis 382 cytochrome c biogenesis orf382 cytochrome C biogenesis 382;(source:Araport11) Ipc03G0001150 AT1G33320.2 0 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc03G0001140 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0001130 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc03G0001120 AT3G10730.1 SAD1/UNC-84 domain protein 2 Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo. SAD1/UNC-84 domain protein 2;(source:Araport11) Ipc03G0001110 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0001100 AT5G61380.1 CCT motif -containing response regulator protein Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. The mRNA is cell-to-cell mobile. CCT motif -containing response regulator protein;(source:Araport11) Ipc03G0001090 AT2G13680.1 callose synthase 5 Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5;(source:Araport11) Ipc03G0001080 AT2G13680.1 callose synthase 5 Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5;(source:Araport11) Ipc03G0001070 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc03G0001060 AT2G42800.1 receptor like protein 29 0 receptor like protein 29;(source:Araport11) Ipc03G0001050 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0001040 AT5G09250.1 ssDNA-binding transcriptional regulator putative transcriptional co-activator (KIWI) mRNA, complete ssDNA-binding transcriptional regulator;(source:Araport11) Ipc03G0001030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0001010 AT2G01710.2 0 SDJ2 functions partially redundantly with SDJ1 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc03G0001000 AT3G54970.4 0 0 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc03G0000990 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000980 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000970 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000940 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000920 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000910 AT1G15790.4 0 0 mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11) Ipc03G0000900 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc03G0000890 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0000880 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0000870 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000860 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000850 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000840 AT4G06676.2 0 0 etoposide-induced protein;(source:Araport11) Ipc03G0000830 #N/A #N/A #N/A #N/A Ipc03G0000820 AT5G23390.1 Plant protein of unknown function (DUF639) 0 polygalacturonase inhibitor (DUF639);(source:Araport11) Ipc03G0000810 AT3G52950.2 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11) Ipc03G0000800 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000790 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc03G0000780 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000770 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc03G0000760 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) IpcGene00550 AT5G56660.1 IAA-leucine resistant (ILR)-like 2 encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested. IAA-leucine resistant (ILR)-like 2;(source:Araport11) IpcGene00551 AT2G35740.1 nositol transporter 3 0 nositol transporter 3;(source:Araport11) IpcGene00552 #N/A #N/A #N/A #N/A IpcGene00553 AT3G21140.1 Pyridoxamine 5'-phosphate oxidase family protein 0 Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11) IpcGene00554 AT3G44550.1 fatty acid reductase 5 Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue. The mRNA is cell-to-cell mobile. fatty acid reductase 5;(source:Araport11) IpcGene00555 AT2G36530.1 Enolase Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. Enolase;(source:Araport11) IpcGene00556 AT4G02120.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) IpcGene00557 AT1G22450.1 cytochrome C oxidase 6B subunit 6b of cytochrome c oxidase cytochrome C oxidase 6B;(source:Araport11) IpcGene00558 AT1G54130.1 RELA/SPOT homolog 3 This gene appears to be at least partially redundant with RSH2 (At3g14050). Guanosine tetraphosphate synthesized by RSH2/RSH3 (and CRSH At3g17470) to an unknown extent can repress chloroplast gene expression, and also reduce chloroplast size. RELA/SPOT homolog 3;(source:Araport11) IpcGene00559 AT3G21300.1 RNA methyltransferase family protein 0 RNA methyltransferase family protein;(source:Araport11) IpcGene00560 AT1G27320.1 histidine kinase 3 Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2. The mRNA is cell-to-cell mobile. histidine kinase 3;(source:Araport11) IpcGene00562 AT5G39270.1 expansin A22 expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A22;(source:Araport11) IpcGene00563 AT3G49500.5 0 Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.Loss of function mutants produce ectopic megaspore mother cell and supernumary female gametophytes. RNA-dependent RNA polymerase 6;(source:Araport11) IpcGene00564 AT2G38060.1 phosphate transporter 4;2 Encodes an inorganic phosphate transporter (PHT4;2). phosphate transporter 4;(source:Araport11) IpcGene00566 AT1G56345.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) IpcGene00569 AT1G05610.2 0 Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS2 is a minor small subunit isoform present in all plant tissues tested. ADP-glucose pyrophosphorylase small subunit 2;(source:Araport11) IpcGene00570 AT4G35190.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) IpcGene00571 AT3G52050.5 5'-3' exonuclease family protein 0 5-3 exonuclease family protein;(source:Araport11) IpcGene00575 AT2G34470.1 urease accessory protein G Encodes a urease accessory protein which is essential for the activation of plant urease. urease accessory protein G;(source:Araport11) IpcGene00577 AT2G09970.1 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) IpcGene00578 AT5G10710.2 0 0 centromere protein O;(source:Araport11) IpcGene00579 AT2G36990.1 RNApolymerase sigma-subunit F Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation. RNApolymerase sigma-subunit F;(source:Araport11) IpcGene00587 AT1G01120.1 3-ketoacyl-CoA synthase 1 Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis. 3-ketoacyl-CoA synthase 1;(source:Araport11) IpcGene00588 AT1G67500.7 0 Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). recovery protein 3;(source:Araport11) IpcGene00592 #N/A #N/A #N/A #N/A IpcGene00593 AT4G26020.3 0 0 4/1 protein short form protein;(source:Araport11) IpcGene00594 AT5G01160.2 0 Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. RING/U-box superfamily protein;(source:Araport11) IpcGene00596 AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) IpcGene00597 AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) IpcGene00598 AT4G31150.2 endonuclease V family protein 0 endonuclease V family protein;(source:Araport11) IpcGene00599 AT5G30510.1 ribosomal protein S1 0 ribosomal protein S1;(source:Araport11) IpcGene00601 AT1G05960.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) IpcGene00602 AT1G02520.3 0 Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.The mRNA is cell-to-cell mobile. P-glycoprotein 11;(source:Araport11) IpcGene00604 AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) IpcGene00606 AT3G18000.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a N-methyltransferase-like protein. Double mutants of NMT1 and NMT3 are defective in leaf, root, flower, seed, and pollen development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene00607 AT4G02710.1 Kinase interacting (KIP1-like) family protein 0 Kinase interacting (KIP1-like) family protein;(source:Araport11) IpcGene00608 AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein 0 ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11) IpcGene00610 AT2G31350.3 0 Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II). glyoxalase 2-5;(source:Araport11) IpcGene00611 AT5G19550.1 aspartate aminotransferase 2 Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. The mRNA is cell-to-cell mobile. aspartate aminotransferase 2;(source:Araport11) IpcGene00613 AT4G17300.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11) IpcGene00615 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) IpcGene00616 AT1G65410.1 non-intrinsic ABC protein 11 Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11;(source:Araport11) IpcGene00620 AT5G23300.1 pyrimidine d dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis pyrimidine d;(source:Araport11) IpcGene00621 AT1G30910.1 Molybdenum cofactor sulfurase family protein 0 Molybdenum cofactor sulfurase family protein;(source:Araport11) IpcGene00622 AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene00625 AT3G15150.1 RING/U-box superfamily protein Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance. RING/U-box superfamily protein;(source:Araport11) IpcGene00627 AT1G49980.9 0 0 DNA/RNA polymerases superfamily protein;(source:Araport11) IpcGene00628 AT2G18500.1 ovate family protein 7 0 ovate family protein 7;(source:Araport11) IpcGene00629 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) IpcGene00630 AT5G16940.2 carbon-sulfur lyases 0 carbon-sulfur lyase;(source:Araport11) IpcGene00632 AT1G79010.1 Alpha-helical ferredoxin 0 Alpha-helical ferredoxin;(source:Araport11) IpcGene00636 AT1G77670.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) IpcGene00637 AT1G67940.1 non-intrinsic ABC protein 3 member of NAP subfamily The mRNA is cell-to-cell mobile. non-intrinsic ABC protein 3;(source:Araport11) IpcGene00638 AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. transcriptional corepressor LEUNIG;(source:Araport11) IpcGene00639 AT3G48000.1 aldehyde dehydrogenase 2B4 Encodes a putative (NAD+) aldehyde dehydrogenase. aldehyde dehydrogenase 2B4;(source:Araport11) IpcGene00641 #N/A #N/A #N/A #N/A Ipc11G0005630 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0005640 AT5G56610.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT1 in root. For PTPMT2.1, lower expression levels were detected in leaf and stem as compared to the other tissues. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc11G0005650 AT1G20135.1 GDSL-like Lipase/Acylhydrolase family protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase family protein;(source:Araport11) Ipc11G0005660 AT4G35560.1 Transducin/WD40 repeat-like superfamily protein Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0005670 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc11G0005680 AT4G29240.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc11G0005690 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0005700 AT1G21480.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc11G0005710 AT3G10310.2 0 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc11G0005720 AT4G29330.1 DERLIN-1 0 DERLIN-1;(source:Araport11) Ipc11G0005730 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005750 AT2G19760.1 profilin 1 first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues. profilin 1;(source:Araport11) Ipc11G0005760 AT4G20210.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc11G0005770 AT2G19760.1 profilin 1 first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues. profilin 1;(source:Araport11) Ipc11G0005780 AT5G56590.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc11G0005790 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0005800 AT4G13340.1 Leucine-rich repeat (LRR) family protein Leucine rich extensin protein involved in cell wall biogenesis and organization. Interacts with several members of the RALF family of ligand peptides. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc11G0005810 AT5G26742.1 DEAD box RNA helicase (RH3) 0 DEAD box RNA helicase (RH3);(source:Araport11) Ipc11G0005820 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0005830 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0005840 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005850 AT2G19680.2 Mitochondrial ATP synthase subunit G protein 0 Mitochondrial ATP synthase subunit G protein;(source:Araport11) Ipc11G0005860 AT1G60650.4 0 Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b), AT5G04280 (AtRZ-1c). It also, along with AtRZ-1c, plays important roles in plant development, pre- mRNA splicing, and general gene expression. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0005870 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0005340 AT5G57920.3 0 0 early nodulin-like protein 10;(source:Araport11) Ipc11G0005880 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc11G0005890 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0005900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005920 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005930 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0005940 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0005950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0005960 AT5G46280.2 0 0 Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc11G0005970 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0005980 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc11G0005990 AT2G22480.1 phosphofructokinase 5 0 phosphofructokinase 5;(source:Araport11) Ipc11G0006000 AT5G66675.4 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc11G0006010 AT5G52660.1 Homeodomain-like superfamily protein Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Homeodomain-like superfamily protein;(source:Araport11) Ipc11G0006020 AT5G08230.1 Tudor/PWWP/MBT domain-containing protein HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions. tudor/PWWP/MBT domain protein;(source:Araport11) Ipc11G0006030 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc11G0006040 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0006050 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0006060 AT3G16090.1 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc11G0006070 AT2G15690.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes an atypical PPR-DYW protein containing five predicted PPR domains and a C-terminal DYW domain separated by an amino acid sequence that do not clearly correspond to an E domain. It is expressed in both the mitochondrion and chloroplast and is also involved in RNA editing in the mitochondrion and chloroplast as a core member of E+-type PPR editosomes. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0006080 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006090 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc11G0006100 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006110 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006120 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0006130 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006140 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0006150 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc11G0006160 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0006170 AT4G19020.1 chromomethylase 2 Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance. chromomethylase 2;(source:Araport11) Ipc11G0006180 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc11G0006190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006230 AT4G33970.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc11G0006240 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0006250 AT5G56760.1 serine acetyltransferase 1;1 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. serine acetyltransferase 1;(source:Araport11) Ipc11G0006260 AT1G48360.6 0 Encodes a FAN1 homolog that is involved in interstrand crosslink repair. FAN1 appears to act in in a different pathway from MUS81 but in similar pathway with RECQ4A, RAD5A and MFH1. zinc ion binding/nucleic acid binding/hydrolase;(source:Araport11) Ipc11G0006270 AT4G29560.1 0 0 fanconi anemia group E protein FANCE protein;(source:Araport11) Ipc11G0006280 AT2G19590.1 ACC oxidase 1 encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase ACC oxidase 1;(source:Araport11) Ipc11G0006290 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006300 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006310 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0002230 AT5G64960.1 cyclin dependent kinase group C2 Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components. cyclin dependent kinase group C2;(source:Araport11) Ipc02G0002470 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0002260 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0002480 AT1G69770.1 chromomethylase 3 Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3;(source:Araport11) Ipc02G0002490 AT1G29010.1 0 0 verprolin;(source:Araport11) Ipc02G0002300 AT4G26483.1 nicotianamine synthases 0 nicotianamine synthase;(source:Araport11) Ipc02G0002500 AT1G68320.1 myb domain protein 62 putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. myb domain protein 62;(source:Araport11) Ipc02G0002510 AT4G17640.1 casein kinase II beta chain 2 Encodes casein kinase II beta (regulatory) subunit. casein kinase II beta chain 2;(source:Araport11) Ipc02G0002320 AT1G61415.1 0 0 CAP-gly domain linker;(source:Araport11) Ipc02G0002520 AT1G18410.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0002530 AT5G16110.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0002370 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002540 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0002550 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0002560 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0002410 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc02G0002570 AT3G16650.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0002580 AT2G44440.1 Emsy N Terminus (ENT) domain-containing protein 0 Emsy N Terminus (ENT) domain-containing protein;(source:Araport11) Ipc02G0002450 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002590 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) IpcGene00819 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) IpcGene00821 AT4G34260.1 1,2-alpha-L-fucosidases 0 1,2-alpha-L-fucosidase;(source:Araport11) IpcGene00822 AT4G17220.1 microtubule-associated proteins 70-5 Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues. microtubule-associated proteins 70-5;(source:Araport11) IpcGene00823 AT4G16380.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc07G0002120 #N/A #N/A #N/A #N/A Ipc07G0002130 AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein 0 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein;(source:Araport11) Ipc07G0002140 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0002150 AT5G35695.1 0 0 nuclease HARBI1-like protein;(source:Araport11) Ipc07G0002160 AT5G11730.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0002170 AT4G16370.1 oligopeptide transporter Encodes a phloem-specific iron transporter that is essential for systemic iron signaling and redistribution of iron and cadmium. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues. oligopeptide transporter;(source:Araport11) Ipc07G0002180 AT4G16360.1 5'-AMP-activated protein kinase beta-2 subunit protein Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. SNF1-related protein kinase regulatory subunit beta-2;(source:Araport11) Ipc07G0002190 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0002200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0002210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0002220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0002230 AT2G40113.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc07G0002240 AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0002250 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc07G0002260 AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein Ortholog of maize IPE1 gene which is involved in pollen exine development. Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc07G0002270 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0002280 AT4G27490.7 0 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc07G0002290 AT5G62570.2 Calmodulin binding protein-like 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc07G0002300 AT5G47690.1 binding One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. binding protein;(source:Araport11) Ipc07G0002310 AT2G22260.5 0 Encodes a homolog of the E. coli AlkB gene, whose protein product is a DNA repair enzyme important in reversing methylation damage. oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) Ipc07G0002320 AT5G55860.1 Plant protein of unknown function (DUF827) WEB1/PMI2 related protein involved in mecahnotransduction.TREPH1 is phosphorylated at position S625 in response to touch, and this is required for mechanosensitive growth response. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc07G0002330 AT1G55840.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc07G0002340 AT3G14960.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc07G0002350 AT1G53470.1 mechanosensitive channel of small conductance-like 4 0 mechanosensitive channel of small conductance-like 4;(source:Araport11) Ipc07G0002360 AT5G47750.1 D6 protein kinase like 2 D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism. D6 protein kinase like 2;(source:Araport11) Ipc07G0002370 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc07G0002380 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc07G0002390 AT4G11390.2 0 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc07G0002400 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0002410 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc07G0002420 AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc07G0002430 AT5G47790.1 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc07G0002440 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc07G0002450 AT4G15950.1 RNA polymerase II, Rpb4, core protein Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V; homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation. RNA polymerase II, Rpb4, core protein;(source:Araport11) Ipc07G0002460 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0002470 AT3G01650.2 0 Encodes RGLG1 (RING domain ligase 1), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. ABA inhibits myristoylation and induces shuttling of the RGLG1 to promote nuclear degradation of PP2CA. RING domain ligase1;(source:Araport11) Ipc07G0002480 AT4G17180.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc07G0002490 AT4G12870.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein 0 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein;(source:Araport11) Ipc07G0002500 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc07G0002510 AT1G64800.1 DNA binding;sequence-specific DNA binding transcription factors 0 DNA binding / transcription factor;(source:Araport11) Ipc07G0002520 AT5G47780.1 galacturonosyltransferase 4 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase 4;(source:Araport11) Ipc07G0002530 AT4G17150.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0002540 AT3G52155.3 0 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc07G0002550 AT2G44200.1 CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor 0 pre-mRNA splicing factor domain-containing protein;(source:Araport11) Ipc07G0002560 AT4G38090.2 Ribosomal protein S5 domain 2-like superfamily protein 0 ribosomal protein S5 domain protein;(source:Araport11) Ipc07G0002570 AT4G31880.1 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. transcriptional regulator;(source:Araport11) Ipc07G0002580 AT1G55620.2 chloride channel F Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. chloride channel F;(source:Araport11) Ipc07G0002590 AT2G25140.1 casein lytic proteinase B4 Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress. casein lytic proteinase B4;(source:Araport11) Ipc07G0002600 AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein 0 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein;(source:Araport11) Ipc07G0002610 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0002620 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc07G0002630 AT5G25610.1 BURP domain-containing protein responsive to dehydration 22 (RD22) mediated by ABA BURP domain-containing protein;(source:Araport11) Ipc07G0002640 AT1G60390.1 polygalacturonase 1 0 polygalacturonase 1;(source:Araport11) Ipc07G0002650 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0002660 AT5G25610.1 BURP domain-containing protein responsive to dehydration 22 (RD22) mediated by ABA BURP domain-containing protein;(source:Araport11) Ipc07G0002670 AT2G25170.2 0 Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.The mRNA is cell-to-cell mobile. chromatin remodeling factor CHD3 (PICKLE);(source:Araport11) Ipc07G0002680 AT2G25180.1 response regulator 12 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 12;(source:Araport11) Ipc07G0002690 AT1G15880.1 golgi snare 11 Golgi SNARE 11 protein (GOS11) golgi snare 11;(source:Araport11) Ipc07G0002700 AT1G80730.1 zinc-finger protein 1 Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation. zinc-finger protein 1;(source:Araport11) Ipc07G0002710 AT4G31930.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc07G0002720 #N/A #N/A #N/A #N/A Ipc07G0002730 AT5G25170.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc07G0002740 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0002750 AT5G11000.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc07G0002760 #N/A #N/A #N/A #N/A Ipc07G0002770 AT5G52510.1 SCARECROW-like 8 0 SCARECROW-like 8;(source:Araport11) Ipc07G0002780 AT4G31990.2 aspartate aminotransferase 5 Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate. aspartate aminotransferase 5;(source:Araport11) Ipc07G0002790 AT2G25220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0002800 AT1G31870.2 0 0 pre-mRNA-splicing factor of RES complex protein;(source:Araport11) Ipc07G0002810 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0002820 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0002830 AT5G54280.1 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc07G0002840 AT2G25250.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc07G0002850 AT4G39235.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0002860 AT5G35160.4 0 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc07G0002870 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0002880 AT4G32030.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0002890 AT5G11030.6 0 alf4-1 prevents initiation of lateral roots. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus. aberrant root formation protein;(source:Araport11) Ipc07G0002900 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0002910 AT2G47500.2 0 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc07G0002920 AT5G51770.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0002930 AT5G25220.2 KNOTTED1-like homeobox gene 3 A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia homeobox protein knotted-1-like 3;(source:Araport11) Ipc07G0002940 #N/A #N/A #N/A #N/A Ipc07G0002950 AT4G32050.1 neurochondrin family protein 0 neurochondrin family protein;(source:Araport11) Ipc07G0002960 AT5G25265.1 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc07G0002970 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc07G0002980 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc07G0002990 AT5G25250.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family Encodes a protein that is involved in a membrane microdomain-dependent, but clathrin-independent, endocytic pathway required for optimal seedling development. The mRNA is cell-to-cell mobile. SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc07G0003000 AT5G23740.1 ribosomal protein S11-beta Encodes a putative ribosomal protein S11 (RPS11-beta). ribosomal protein S11-beta;(source:Araport11) Ipc07G0003010 AT5G25270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc07G0003020 AT5G20220.4 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0003030 AT5G04440.1 Protein of unknown function (DUF1997) 0 RAP release 2, galactose-binding-like domain protein, putative (DUF1997);(source:Araport11) Ipc07G0003040 AT5G25270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc07G0003050 AT2G12400.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc07G0003060 AT5G25280.3 0 0 serine-rich protein-like protein;(source:Araport11) Ipc07G0003070 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc07G0003080 AT4G32060.1 calcium-binding EF hand family protein Encodes an EF-hand protein with homology to constituents of the mitochondrial Ca2+ uniporter machinery in mammals. MICU binds Ca2+ and localizes to the mitochondria in Arabidopsis. It is a negative regulator of mitochondrial calcium uptake. Mutants display elevated matrix calcium at steady state and modified calcium transient kinetics in vivo. calcium-binding EF hand family protein;(source:Araport11) Ipc07G0003090 AT2G25290.4 0 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc07G0003100 AT3G47580.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0003110 AT1G80110.1 phloem protein 2-B11 0 phloem protein 2-B11;(source:Araport11) Ipc07G0003120 AT1G70180.3 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc07G0003130 AT5G64420.1 DNA polymerase V family 0 DNA polymerase V family;(source:Araport11) Ipc07G0003140 AT3G44560.1 fatty acid reductase 8 0 fatty acid reductase 8;(source:Araport11) Ipc07G0003150 AT5G37470.2 0 0 hypothetical protein (DUF577);(source:Araport11) Ipc07G0003170 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0003160 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0003180 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0003190 AT1G09230.2 0 Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0003200 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc07G0003210 AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0003220 AT5G10120.1 Ethylene insensitive 3 family protein 0 Ethylene insensitive 3 family protein;(source:Araport11) Ipc07G0003230 AT4G38240.3 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis. alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase;(source:Araport11) Ipc07G0003240 AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein 0 Beta-1,3-N-Acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0003250 AT2G31170.1 Cysteinyl-tRNA synthetase, class Ia family protein Encodes the cysteinyl t-RNA synthetase SYCO ARATH (SYCO), which is expressed and required in the central cell but not in the antipodals. SYCO, localized to the mitochondria, is necessary for mitochondrial cristae integrity. Mutation of this gene affects the lifespan of adjacent accessory cells. Cysteinyl-tRNA synthetase, class Ia family protein;(source:Araport11) Ipc07G0003260 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc07G0003270 AT4G32140.1 EamA-like transporter family 0 EamA-like transporter family;(source:Araport11) Ipc07G0003280 AT5G11100.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc07G0003290 AT4G28360.1 Ribosomal protein L22p/L17e family protein 0 Ribosomal protein L22p/L17e family protein;(source:Araport11) Ipc07G0003300 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0003310 AT1G21500.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0003320 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0003330 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0003340 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0003350 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0003360 #N/A #N/A #N/A #N/A Ipc07G0003370 AT3G55270.1 mitogen-activated protein kinase phosphatase 1 Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation. mitogen-activated protein kinase phosphatase 1;(source:Araport11) Ipc07G0003380 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0003390 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0003400 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc07G0003410 AT5G25310.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0003420 AT5G25320.1 ACT-like superfamily protein 0 ACT-like superfamily protein;(source:Araport11) Ipc07G0003430 AT5G11150.2 0 Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. vesicle-associated membrane protein 713;(source:Araport11) Ipc07G0003440 AT3G19050.1 phragmoplast orienting kinesin 2 PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2;(source:Araport11) Ipc07G0003460 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc07G0003450 AT5G04020.2 0 0 calmodulin binding protein;(source:Araport11) Ipc07G0003470 AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0003480 AT2G42070.1 nudix hydrolase homolog 23 Encodes a plastid-localized Nudix hydrolase that has FAD pyrophosphohydrolase activity. Negative feedback regulation of the metabolism of flavins through the hydrolysis of FAD by AtNUDX23 in plastids is involved in the flavin homeostasis in plant cells. nudix hydrolase homolog 23;(source:Araport11) Ipc07G0003490 AT3G46730.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0003500 AT4G32160.1 Phox (PX) domain-containing protein 0 Phox (PX) domain-containing protein;(source:Araport11) Ipc07G0003510 AT4G32260.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0 ATPase, F0 complex, subunit B/B, bacterial/chloroplast;(source:Araport11) Ipc07G0003520 AT4G32270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc07G0003530 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0003540 AT4G32272.1 Nucleotide/sugar transporter family protein Golgi-localized nucleotide sugar (UDP-GlcNAc) transporter that delivers an essential substrate for the maturation of N-glycans and the GIPC class of sphingolipids. Nucleotide/sugar transporter family protein;(source:Araport11) Ipc07G0003550 AT5G40830.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0003560 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc07G0003570 AT4G19690.2 iron-regulated transporter 1 The gene encodes Fe2+ transporter protein. It is a member of the Zrt/Irt-like protein (ZIP) family of transporters. AtIRT1 has broad specificity for divalent heavy metals, mediating the transport of zinc, manganese, cobalt and cadmium under Fe-deficient conditions. IRT1 is monoubiquitinated to promote endocytic trafficking. The mRNA is cell-to-cell mobile. iron-regulated transporter 1;(source:Araport11) Ipc07G0003580 AT4G32280.1 indole-3-acetic acid inducible 29 0 indole-3-acetic acid inducible 29;(source:Araport11) Ipc07G0003590 AT2G45750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0003600 AT1G04240.2 0 SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro. AUX/IAA transcriptional regulator family protein;(source:Araport11) Ipc07G0003610 AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related AP180 N-terminal homology domain, TPLATE complex protein involved in clathrin-mediated endocytosis. epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein;(source:Araport11) Ipc07G0003620 AT1G76220.1 Arabidopsis protein of unknown function (DUF241) 0 hypothetical protein (DUF241);(source:Araport11) Ipc07G0003630 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0003640 AT4G32290.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0003660 AT5G11350.3 0 Deadenylase. DNAse I-like superfamily protein;(source:Araport11) Ipc07G0003650 AT5G58130.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0003670 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc07G0003680 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc07G0003690 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc07G0003700 AT4G32295.1 0 0 histone acetyltransferase;(source:Araport11) Ipc07G0003710 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0003720 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0003730 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0003740 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0003750 AT2G25460.2 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc07G0003760 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc07G0003770 AT4G32320.1 ascorbate peroxidase 6 Encodes a cytosolic ascorbate peroxidase APX6. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. ascorbate peroxidase 6;(source:Araport11) Ipc07G0003780 AT1G04940.1 translocon at the inner envelope membrane of chloroplasts 20 Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V). translocon at the inner envelope membrane of chloroplasts 20;(source:Araport11) Ipc07G0003790 AT2G30630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0003800 AT4G32330.4 0 WDL5 is an target of EIN3 that co-localizes with cortical microtubles. It its thought to function to stabilize microtubles during ethylene induced hypocotyl elongation. TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc07G0003810 AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0011260 AT5G53150.6 0 0 DnaJ heat shock amino-terminal domain protein;(source:Araport11) Ipc06G0017080 AT1G34360.1 translation initiation factor 3 (IF-3) family protein 0 translation initiation factor 3 (IF-3) family protein;(source:Araport11) Ipc09G0011250 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0011240 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0011220 AT5G24070.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc09G0011210 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0011200 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0011190 AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein;(source:Araport11) Ipc09G0011180 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0011170 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc09G0011160 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc09G0011150 AT1G77340.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0011140 AT3G27010.2 0 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20;(source:Araport11) Ipc09G0011130 AT5G50710.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0011120 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0011110 AT5G63960.2 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases Encodes the catalytic subunits of DNA polymerase δ, which is involved in the deposition of epigenetic marks. DNA polymerase delta subunit 1;(source:Araport11) Ipc09G0011100 AT4G19130.2 0 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc09G0011090 AT4G22610.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0011080 AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc09G0011070 AT5G13090.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0011060 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc09G0011050 AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains 0 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain;(source:Araport11) Ipc09G0011040 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc09G0011030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0011020 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0011010 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc09G0011000 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010990 AT2G33880.1 homeobox-3 Encodes a protein with similarity to WUS type homeodomain protein. Required for meristem growth and development and acts through positive regulation of WUS. Loss of function phenotypes include embryo lethality, hyponastic cotyledons, reduced root development and smaller meristems. Phenotypes can be rescued by addition of sucrose in the growth media. Overexpression can partially rescue the triple mutant cytokinin receptor phenotype suggesting HB-3 is a downstream effector of cytokinin signaling. homeobox-3;(source:Araport11) Ipc09G0010980 AT1G27320.1 histidine kinase 3 Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2. The mRNA is cell-to-cell mobile. histidine kinase 3;(source:Araport11) Ipc09G0010970 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010960 AT1G04860.1 ubiquitin-specific protease 2 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 2;(source:Araport11) Ipc09G0010950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001480 AT5G05470.1 eukaryotic translation initiation factor 2 alpha subunit Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. eukaryotic translation initiation factor 2 alpha subunit;(source:Araport11) Ipc09G0010940 AT3G55850.6 0 Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids. Amidohydrolase family;(source:Araport11) Ipc09G0010930 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010920 AT5G50760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc09G0010910 AT5G22640.1 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis. The mRNA is cell-to-cell mobile. MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein;(source:Araport11) Ipc09G0010900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010890 AT5G50780.2 0 MORC4 is a member of a family of GHKL ATPases. It is localized in the nuceloplasm and adjacent to chromocenters. Along with MORC7, it appears to repress the expression Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc09G0010880 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0010870 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc09G0010860 AT5G14070.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen. Thioredoxin superfamily protein;(source:Araport11) Ipc09G0010850 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc09G0010840 AT3G27070.2 translocase outer membrane 20-1 Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins translocase outer membrane 20-1;(source:Araport11) Ipc09G0010830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010820 AT5G62760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0010810 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0010800 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0010790 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015040 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010770 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc09G0010760 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010750 AT5G43230.1 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc09G0010740 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010730 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc09G0010720 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010710 AT5G45930.1 magnesium chelatase i2 encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Has ATPase activity, regulated by TRX-f. Involved in the assembly of the Mg chelatase complex. magnesium chelatase i2;(source:Araport11) Ipc09G0010700 AT1G60360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0010690 AT1G44835.1 YbaK/aminoacyl-tRNA synthetase-associated domain 0 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein;(source:Araport11) Ipc09G0010680 AT1G05960.4 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc09G0010670 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010650 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0010640 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0010630 AT5G13170.1 senescence-associated gene 29 Encodes a member of the SWEET sucrose efflux transporter family proteins. senescence-associated gene 29;(source:Araport11) Ipc09G0010620 AT1G17120.1 cationic amino acid transporter 8 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. cationic amino acid transporter 8;(source:Araport11) Ipc09G0010610 AT1G68370.1 Chaperone DnaJ-domain superfamily protein DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0000080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010600 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010590 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0010580 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc09G0010570 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010560 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010550 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010540 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc09G0010530 #N/A #N/A #N/A #N/A Ipc09G0010520 AT5G59660.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0010510 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0010500 AT1G68390.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc09G0010490 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010480 AT2G37340.6 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc09G0010470 AT5G42740.2 0 0 Sugar isomerase (SIS) family protein;(source:Araport11) Ipc09G0010460 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc09G0010450 AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-V;(source:Araport11) Ipc09G0010440 AT1G19640.1 jasmonic acid carboxyl methyltransferase Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. jasmonic acid carboxyl methyltransferase;(source:Araport11) Ipc09G0010430 AT4G11050.1 glycosyl hydrolase 9C3 0 glycosyl hydrolase 9C3;(source:Araport11) Ipc15G0016320 AT2G39310.2 jacalin-related lectin 22 0 jacalin-related lectin 22;(source:Araport11) Ipc15G0016330 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0016340 AT1G15460.2 0 Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions. HCO3- transporter family;(source:Araport11) Ipc15G0016350 AT2G26650.1 K+ transporter 1 Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). K+ transporter 1;(source:Araport11) Ipc15G0016360 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc15G0016370 AT5G25450.1 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0 Cytochrome bd ubiquinol oxidase, 14kDa subunit;(source:Araport11) Ipc15G0016380 AT4G32440.3 Plant Tudor-like RNA-binding protein 0 Plant Tudor-like RNA-binding protein;(source:Araport11) Ipc15G0016390 AT4G32420.4 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc15G0016400 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0016410 AT2G25270.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0016420 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0016430 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0016440 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0016450 AT4G27240.2 0 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc15G0016460 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc15G0016470 AT1G28490.1 syntaxin of plants 61 Encodes SYP61, one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability. syntaxin of plants 61;(source:Araport11) Ipc15G0016480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0016490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0016500 AT2G43080.1 P4H isoform 1 Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides. P4H isoform 1;(source:Araport11) Ipc15G0016510 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0016520 #N/A #N/A #N/A #N/A Ipc15G0016530 AT1G05230.3 homeodomain GLABROUS 2 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number. homeodomain GLABROUS 2;(source:Araport11) Ipc15G0016540 AT4G27190.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0016550 AT1G29740.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0016560 #N/A #N/A #N/A #N/A Ipc15G0016570 AT2G34190.1 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc15G0016580 AT2G34680.1 Outer arm dynein light chain 1 protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc15G0016590 AT3G04580.2 Signal transduction histidine kinase, hybrid-type, ethylene sensor Ethylene receptor, subfamily 2. Has serine kinase activity. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc15G0016600 AT4G14770.2 0 Regulates fate transition and cell Divisions in the stomatal lineage. TESMIN/TSO1-like CXC 2;(source:Araport11) Ipc15G0016610 AT5G20060.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0016620 AT3G46510.1 plant U-box 13 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13;(source:Araport11) Ipc15G0016630 AT4G32140.1 EamA-like transporter family 0 EamA-like transporter family;(source:Araport11) Ipc15G0016650 AT3G57920.1 squamosa promoter binding protein-like 15 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. squamosa promoter binding protein-like 15;(source:Araport11) Ipc15G0016640 AT1G13880.2 0 0 ELM2 domain-containing protein;(source:Araport11) Ipc15G0016660 AT5G37950.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0016670 AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0016680 AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0016690 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0016700 AT5G20240.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc15G0016710 AT2G20990.3 synaptotagmin A Encodes a protein specifically localized to the ER-PM boundary with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance and mechanical stress response. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. SYT1 may have a role in membrane repair such as membrane resealing after freezing induced damage. SYT1 binds to phosphatidylinositol phosphates in vitro. It is distributed to immobile tubules and likely plays an important role in the formation of the tubular ER network as well as in cellular ER-PM tethering. synaptotagmin A;(source:Araport11) Ipc15G0016720 AT2G45700.1 sterile alpha motif (SAM) domain-containing protein 0 sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc15G0016730 AT3G16250.1 NDH-dependent cyclic electron flow 1 encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster. NDH-dependent cyclic electron flow 1;(source:Araport11) Ipc15G0016740 AT1G74930.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. The mRNA is cell-to-cell mobile. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0016750 AT1G66660.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc15G0016760 AT2G26250.1 3-ketoacyl-CoA synthase 10 epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle. 3-ketoacyl-CoA synthase 10;(source:Araport11) Ipc15G0016770 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc15G0016780 AT3G19920.2 0 0 BTB/POZ domain protein;(source:Araport11) Ipc15G0016790 AT4G27190.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0016800 AT4G27190.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0016810 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0016820 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc15G0016830 AT4G27190.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0016840 AT4G31780.1 monogalactosyl diacylglycerol synthase 1 Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. monogalactosyl diacylglycerol synthase 1;(source:Araport11) Ipc15G0016850 AT2G43160.4 ENTH/VHS family protein 0 ENTH/VHS family protein;(source:Araport11) Ipc15G0016860 AT2G15260.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0016870 AT5G18410.3 transcription activators distorted trichomes and exhibits a diffuse actin cytoskeleton transcription activator;(source:Araport11) Ipc15G0016880 AT4G17140.2 pleckstrin homology (PH) domain-containing protein 0 pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc15G0016890 AT3G23940.1 dehydratase family Encodes a member of the dihydroxyacid dehydrates family of proteins that encode enzymes involved in branched chain amino acid biosynthesis. Loss of function mutations have significantly reduced transmission and fertility due to defects in male and female gametophyte development and embryo lethality. Mutants have increased sensitivity to abiotic stressors which may be partially compensated by addition of amino acids to the growth medium. dehydratase family;(source:Araport11) Ipc15G0016900 AT5G21280.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0016910 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc15G0016920 AT5G55131.1 Protein of unknown function (PD694200) Encodes a defensin-like (DEFL) family protein. Protein of unknown function (PD694200);(source:Araport11) Ipc15G0016930 AT4G33160.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc15G0016940 AT5G25110.1 CBL-interacting protein kinase 25 member of AtCIPKs CBL-interacting protein kinase 25;(source:Araport11) Ipc15G0016950 #N/A #N/A #N/A #N/A Ipc15G0016960 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0016970 AT5G65530.1 Protein kinase superfamily protein Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_ Protein kinase superfamily protein;(source:Araport11) Ipc15G0016980 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0016990 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc15G0017000 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0017010 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc15G0017020 AT3G63530.2 RING/U-box superfamily protein Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation. RING/U-box superfamily protein;(source:Araport11) Ipc15G0017030 AT1G17610.2 0 TN-type protein that controls temperature-dependent growth and defense responses .Mutant accumulates steryl-esters at low temperatures and shows temperature dependent activation of defense responses.. Disease resistance protein (TIR-NBS class);(source:Araport11) Ipc15G0017040 AT3G15380.1 Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport, localizes to the trans-Golgi network, and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile, defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein;(source:Araport11) Ipc15G0017050 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc15G0017060 #N/A #N/A #N/A #N/A Ipc15G0017070 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc15G0017080 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc15G0017090 AT1G44030.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc15G0017100 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc15G0017110 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0017120 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc15G0017130 AT1G52155.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0017140 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc15G0017150 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0017160 AT1G80840.1 WRKY DNA-binding protein 40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 40;(source:Araport11) Ipc15G0017170 AT3G32400.2 0 0 Actin-binding FH2/DRF autoregulatory protein;(source:Araport11) Ipc15G0017180 #N/A #N/A #N/A #N/A Ipc15G0017190 AT3G63110.1 isopentenyltransferase 3 Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast. isopentenyltransferase 3;(source:Araport11) Ipc15G0017200 AT3G23780.2 nuclear RNA polymerase D2A This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. nuclear RNA polymerase D2A;(source:Araport11) Ipc15G0017210 AT5G10870.1 chorismate mutase 2 Encodes chorismate mutase AtCM2. chorismate mutase 2;(source:Araport11) Ipc15G0017220 AT1G19720.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc15G0017230 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc15G0017240 AT4G31805.1 WRKY family transcription factor Encodes POLAR, a scaffold protein associated with cellular asymmetry of meristemoids. Its transcript levels change after inducing MUTE expression in a mute background. WRKY family transcription factor;(source:Araport11) Ipc15G0017250 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc15G0017260 AT5G23960.1 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc15G0017270 AT1G73370.2 sucrose synthase 6 Encodes a protein with sucrose synthase activity (SUS6). sucrose synthase 6;(source:Araport11) Ipc15G0017280 AT3G19280.1 fucosyltransferase 11 Encodes a protein with core α1,3-fucosyltransferase activity. fucosyltransferase 11;(source:Araport11) Ipc15G0017290 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0017300 AT4G31820.1 Phototropic-responsive NPH3 family protein A member of the NPY family genes (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Encodes a protein with similarity to NHP3. Contains BTB/POZ domain. Promoter region has canonical auxin response element binding site and Wus binding site. Co-localizes to the late endosome with PID. Regulates cotyledon development through control of PIN1 polarity in concert with PID. Also involved in sepal and gynoecia development. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc15G0017310 AT5G67170.2 SEC-C motif-containing protein / OTU-like cysteine protease family protein 0 SEC-C motif-containing protein / OTU-like cysteine protease family protein;(source:Araport11) Ipc15G0017320 AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity. Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc15G0017330 AT3G61650.1 gamma-tubulin Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. gamma-tubulin;(source:Araport11) Ipc15G0017340 AT4G31830.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0017350 AT4G31830.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0017360 AT5G25090.1 early nodulin-like protein 13 0 early nodulin-like protein 13;(source:Araport11) Ipc15G0017370 AT2G24020.1 Uncharacterised BCR, YbaB family COG0718 STIC2 was identifided in a screen for suppressors of chloroplast protein import defect in tic40. Putative BCR, YbaB family COG0718;(source:Araport11) Ipc15G0017380 AT5G25080.1 Sas10/Utp3/C1D family 0 Sas10/Utp3/C1D family;(source:Araport11) Ipc15G0017390 AT2G39020.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound. The mRNA is cell-to-cell mobile. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc15G0017400 AT5G57910.1 0 0 ribosomal RNA small subunit methyltransferase G;(source:Araport11) Ipc15G0017410 AT3G45610.1 Dof-type zinc finger DNA-binding family protein PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc15G0017420 AT3G30200.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc15G0017430 AT3G45610.1 Dof-type zinc finger DNA-binding family protein PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc15G0017440 AT5G03555.1 permease, cytosine/purines, uracil, thiamine, allantoin family protein Encodes PLUTO (plastidic nucleobase transporter), a member of the Nucleobase:Cation-Symporter1 protein family, capable of transporting purine and pyrimidine nucleobases. permease, cytosine/purines, uracil, thiamine, allantoin family protein;(source:Araport11) Ipc15G0017450 AT3G59410.3 0 Encodes an eIF2alpha kinase that can bind uncharged tRNA via its C-terminus and can phosphorylate both eIF2alpha homologues in Arabidopsis. protein kinase family protein;(source:Araport11) Ipc15G0017460 AT1G64900.1 cytochrome P450, family 89, subfamily A, polypeptide 2 Encodes cytochrome P450 (CYP89A2). The mRNA is cell-to-cell mobile. cytochrome P450, family 89, subfamily A, polypeptide 2;(source:Araport11) Ipc15G0017470 AT3G53140.1 O-methyltransferase family protein Nicotinate N-methyltransferase involved in N-methylnicotinate formation. O-methyltransferase family protein;(source:Araport11) Ipc15G0017480 #N/A #N/A #N/A #N/A Ipc15G0017490 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc15G0017500 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc15G0017510 AT2G36750.1 UDP-glucosyl transferase 73C1 0 UDP-glucosyl transferase 73C1;(source:Araport11) Ipc15G0017520 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0017530 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0017540 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc15G0017550 AT1G68790.1 little nuclei3 Member of small gene family in Arabidopsis containing 4 members (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei3;(source:Araport11) Ipc15G0017560 AT3G43670.1 Copper amine oxidase family protein 0 Copper amine oxidase family protein;(source:Araport11) Ipc15G0017570 AT5G51060.1 NADPH/respiratory burst oxidase protein D RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx. NADPH/respiratory burst oxidase protein D;(source:Araport11) Ipc15G0017580 AT3G54440.3 glycoside hydrolase family 2 protein 0 glycoside hydrolase family 2 protein;(source:Araport11) Ipc15G0017590 AT2G36750.1 UDP-glucosyl transferase 73C1 0 UDP-glucosyl transferase 73C1;(source:Araport11) Ipc15G0017600 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0017610 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0017620 AT2G36810.2 0 Specifically involved in gravity perception and/or gravity signal transduction for the shoot gravitropic response. Effects gravitropism only in inflorescence stems but normal in both hypocotyls and roots. ARM repeat superfamily protein;(source:Araport11) Ipc15G0017630 AT5G03530.2 0 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes. RAB GTPase homolog C2A;(source:Araport11) Ipc15G0017640 AT5G47010.1 RNA helicase, putative Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. The mRNA is cell-to-cell mobile. RNA helicase;(source:Araport11) Ipc15G0017650 AT1G72050.3 0 Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm. transcription factor IIIA;(source:Araport11) Ipc15G0017660 AT3G25460.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc15G0017670 AT5G04950.1 nicotianamine synthase 1 Encodes a nicotianamide synthase. nicotianamine synthase 1;(source:Araport11) Ipc15G0017680 AT3G44400.5 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0017690 AT2G28200.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc15G0017700 AT5G62800.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc15G0017710 AT2G28210.1 alpha carbonic anhydrase 2 0 alpha carbonic anhydrase 2;(source:Araport11) Ipc15G0017720 AT3G53200.1 myb domain protein 27 Member of the R2R3 factor gene family. myb domain protein 27;(source:Araport11) Ipc15G0017730 AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'beta). Functions redundantly with the alpha subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc15G0017740 AT2G15590.1 Protein of unknown function (DUF1685) 0 spire, putative (DUF1685);(source:Araport11) Ipc15G0017750 AT3G66654.5 0 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc15G0017760 #N/A #N/A #N/A #N/A Ipc15G0017770 AT5G27730.1 Protein of unknown function (DUF1624) 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc15G0017780 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc15G0017790 AT5G03450.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0017800 AT5G03430.1 phosphoadenosine phosphosulfate (PAPS) reductase family protein 0 phosphoadenosine phosphosulfate (PAPS) reductase family protein;(source:Araport11) Ipc15G0017810 AT4G09150.2 T-complex protein 11 0 T-complex protein 11;(source:Araport11) Ipc15G0017820 AT3G53220.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc15G0017830 AT2G36880.2 methionine adenosyltransferase 3 0 methionine adenosyltransferase 3;(source:Araport11) Ipc15G0017840 AT2G27360.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0017850 #N/A #N/A #N/A #N/A Ipc15G0017860 AT3G60040.5 0 0 F-box family protein;(source:Araport11) Ipc15G0017870 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0017880 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc15G0017890 #N/A #N/A #N/A #N/A Ipc15G0017900 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc15G0017910 AT5G66250.4 kinectin-related 0 kinectin-like protein;(source:Araport11) Ipc15G0017920 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc15G0017930 AT1G64480.3 0 calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs calcineurin B-like protein 8;(source:Araport11) Ipc15G0017940 AT5G62570.2 Calmodulin binding protein-like 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc15G0017950 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0017960 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0017970 #N/A #N/A #N/A #N/A Ipc15G0017980 AT5G03380.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc15G0017990 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc15G0018000 AT5G03370.1 acylphosphatase family 0 acylphosphatase family;(source:Araport11) Ipc15G0018010 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0018020 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0018030 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0018040 #N/A #N/A #N/A #N/A Ipc15G0018050 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0018060 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0018070 AT5G52970.2 0 0 thylakoid lumen 15.0 kDa protein;(source:Araport11) Ipc15G0018080 AT3G09860.1 0 0 actin T1-like protein;(source:Araport11) Ipc15G0018090 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0018100 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc15G0018110 AT2G28085.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0018120 AT5G03345.1 0 0 membrane magnesium transporter-like protein;(source:Araport11) Ipc15G0018130 AT1G77310.1 0 0 wound-responsive family protein;(source:Araport11) Ipc15G0018140 AT2G36970.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0018150 AT5G40080.1 Mitochondrial ribosomal protein L27 0 Mitochondrial ribosomal protein L27;(source:Araport11) Ipc15G0018160 AT5G03340.1 ATPase, AAA-type, CDC48 protein 0 ATPase, AAA-type, CDC48 protein;(source:Araport11) Ipc15G0018170 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc15G0018180 AT3G09830.3 0 Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae. Protein kinase superfamily protein;(source:Araport11) Ipc15G0018190 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc15G0018200 AT2G37025.3 0 0 TRF-like 8;(source:Araport11) Ipc15G0018210 AT2G37035.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0018220 AT5G03300.1 adenosine kinase 2 Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion. The mRNA is cell-to-cell mobile. adenosine kinase 2;(source:Araport11) Ipc15G0018230 AT5G03290.1 isocitrate dehydrogenase V Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. The mRNA is cell-to-cell mobile. isocitrate dehydrogenase V;(source:Araport11) Ipc15G0018240 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc15G0018250 AT5G51200.3 0 0 nuclear pore complex protein (DUF3414);(source:Araport11) Ipc15G0018260 AT1G65110.1 Ubiquitin carboxyl-terminal hydrolase-related protein 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc15G0018270 AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0018280 AT2G28260.1 cyclic nucleotide-gated channel 15 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 15;(source:Araport11) Ipc15G0018290 AT4G05320.4 polyubiquitin 10 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc15G0018300 AT2G37195.1 0 0 acyl-CoA-binding domain protein;(source:Araport11) Ipc15G0018310 AT4G16860.2 0 Confers resistance to Peronospora parasitica. RPP4 is coordinately regulated by transcriptional activation and RNA silencing. Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0018320 AT5G50870.1 ubiquitin-conjugating enzyme 27 0 ubiquitin-conjugating enzyme 27;(source:Araport11) Ipc15G0018330 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc15G0018340 AT4G34920.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc15G0018350 AT2G25970.1 KH domain-containing protein 0 KH domain-containing protein;(source:Araport11) Ipc15G0018360 AT2G03800.1 D-aminoacyl-tRNA deacylases encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. D-aminoacyl-tRNA deacylase;(source:Araport11) Ipc15G0018370 AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0018380 AT5G61580.2 phosphofructokinase 4 0 phosphofructokinase 4;(source:Araport11) Ipc15G0018390 AT2G25970.1 KH domain-containing protein 0 KH domain-containing protein;(source:Araport11) Ipc15G0018400 AT3G11810.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0018410 AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0018420 AT3G09770.1 RING/U-box superfamily protein Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion. RING/U-box superfamily protein;(source:Araport11) Ipc15G0018430 AT5G60580.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0018440 AT5G62950.7 0 0 RNA polymerase II, Rpb4, core protein;(source:Araport11) Ipc15G0018450 AT3G53390.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0018460 AT1G61080.5 0 0 Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0018470 AT4G07515.1 Protein of unknown function (DUF784) 0 ECA1 gametogenesis family protein (DUF784);(source:Araport11) Ipc15G0018480 AT2G30900.1 TRICHOME BIREFRINGENCE-LIKE 43 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 43;(source:Araport11) Ipc15G0018490 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0018500 AT1G29800.1 RING/FYVE/PHD-type zinc finger family protein 0 RING/FYVE/PHD-type zinc finger family protein;(source:Araport11) Ipc15G0018510 AT1G78700.1 BES1/BZR1 homolog 4 0 BES1/BZR1 homolog 4;(source:Araport11) Ipc15G0018520 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0018530 AT1G53460.1 0 0 craniofacial development protein;(source:Araport11) Ipc15G0018540 AT1G78650.1 DNA-directed DNA polymerases Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication. DNA-directed DNA polymerase;(source:Araport11) Ipc15G0018550 AT3G23020.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0018560 AT1G53380.5 0 0 hypothetical protein (DUF641);(source:Araport11) Ipc15G0018570 AT3G18240.2 Ribosomal protein S24/S35, mitochondrial 0 Ribosomal protein S24/S35;(source:Araport11) Ipc15G0018580 #N/A #N/A #N/A #N/A Ipc15G0018590 AT3G14910.1 0 0 Rab3 GTPase-activating protein non-catalytic subunit;(source:Araport11) Ipc15G0018600 AT3G14930.2 Uroporphyrinogen decarboxylase 0 Uroporphyrinogen decarboxylase;(source:Araport11) Ipc15G0018610 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc12G0003320 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0000510 AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0000490 AT3G23760.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc12G0003330 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0003340 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003350 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc12G0003360 AT3G27150.2 0 Target gene of MIR2111-5p. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0003370 AT1G18550.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc12G0003380 AT5G50970.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc12G0003390 AT5G61890.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0003400 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc12G0003410 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc12G0003420 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0003430 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc12G0003440 AT3G59280.1 Protein Transporter, Pam16 Encodes the ortholog of yeast PAM16, part of the mitochondrial inner membrane protein import motor. Single mutant plants exhibit a smaller size and enhanced resistance against virulent pathogens. They also display elevated reactive oxygen species (ROS) accumulation. Protein Transporter, Pam16;(source:Araport11) Ipc12G0003450 AT4G20020.1 0 Encodes a protein involved in RNA editing in mitochondria. Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. multiple organellar RNA editing factor;(source:Araport11) Ipc12G0003460 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0003470 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc12G0003480 AT5G20165.1 0 0 kish-A-like protein;(source:Araport11) Ipc12G0003490 AT5G61840.1 Exostosin family protein Encodes a UDP-Xyl:beta-(1,4)-xylosyl transferase. Exostosin family protein;(source:Araport11) Ipc12G0003500 AT5G51010.1 Rubredoxin-like superfamily protein 0 Rubredoxin-like superfamily protein;(source:Araport11) Ipc12G0003510 AT5G51020.1 crumpled leaf Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division. crumpled leaf;(source:Araport11) Ipc12G0003520 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0003530 AT3G23760.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc12G0003540 AT4G31570.6 0 0 nucleoporin;(source:Araport11) Ipc12G0003550 AT5G13980.3 Glycosyl hydrolase family 38 protein 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc12G0003570 AT5G13980.2 Glycosyl hydrolase family 38 protein 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc12G0003560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0003580 AT5G22545.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003590 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0003600 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0003610 AT5G50990.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0003620 AT5G13980.3 Glycosyl hydrolase family 38 protein 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc12G0003630 AT5G13980.2 Glycosyl hydrolase family 38 protein 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc12G0003640 AT5G13300.1 ARF GTPase-activating protein Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. ARF GTPase-activating protein;(source:Araport11) Ipc12G0003650 AT5G62000.5 0 Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.Phosphorylation of ARF2 relieves repression of transcription of HAK5 and thereby promotes potassium uptake. The mRNA is cell-to-cell mobile. auxin response factor 2;(source:Araport11) Ipc12G0003660 AT3G26744.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. It also binds to and inhibits the expression of ABI3. Mutants are defective in cold-regulated gene expression and ABA signaling druing seed germination.. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. Together with ZOU, ICE1 determines primary seed dormancy depth independently of their joint role in endosperm development.ICE1 interacts with ABI5. Also members of the DELLA family, which repress ICE1 function. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0003670 AT1G24290.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc12G0003680 AT5G50920.1 CLPC homologue 1 Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. Association of Hsp93 with the inner envelope membrane through its N domain is important for the functions of Hsp93 in vivo. CLPC homologue 1;(source:Araport11) Ipc12G0003690 AT5G23720.1 dual specificity protein phosphatase family protein Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling. dual specificity protein phosphatase family protein;(source:Araport11) Ipc12G0003700 AT1G28110.2 serine carboxypeptidase-like 45 0 serine carboxypeptidase-like 45;(source:Araport11) Ipc12G0003710 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc12G0003720 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0003730 AT3G48860.2 0 0 coiled-coil protein;(source:Araport11) Ipc12G0003740 AT4G25050.1 acyl carrier protein 4 encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light. acyl carrier protein 4;(source:Araport11) Ipc12G0003750 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc12G0003760 #N/A #N/A #N/A #N/A Ipc12G0003770 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0003780 AT4G35335.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc12G0003790 AT5G03050.2 0 0 knotted 1-binding protein;(source:Araport11) Ipc12G0003800 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0003810 AT1G18300.1 nudix hydrolase homolog 4 0 nudix hydrolase homolog 4;(source:Araport11) Ipc12G0003820 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc12G0003830 AT5G01290.1 mRNA capping enzyme family protein 0 mRNA capping enzyme family protein;(source:Araport11) Ipc12G0003840 AT5G34870.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0003850 AT4G37110.4 0 0 Zinc-finger domain of monoamine-oxidase A repressor R1;(source:Araport11) Ipc12G0003860 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0003870 AT5G34870.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0003880 AT4G37110.4 0 0 Zinc-finger domain of monoamine-oxidase A repressor R1;(source:Araport11) Ipc12G0003890 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc12G0003900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0003910 AT1G48480.1 receptor-like kinase 1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene receptor-like kinase 1;(source:Araport11) Ipc12G0003920 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0003930 AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc12G0003940 AT5G62410.1 structural maintenance of chromosomes 2 SMC2-1 (SMC2) structural maintenance of chromosomes 2;(source:Araport11) Ipc12G0003950 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0003960 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0003970 AT3G17850.1 Protein kinase superfamily protein Protein kinase which together with IRE3 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc12G0003980 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc12G0003990 AT3G07520.1 glutamate receptor 1.4 member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis. glutamate receptor 1.4;(source:Araport11) Ipc12G0004000 AT1G30473.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0004010 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc12G0004020 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc12G0004030 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc12G0004040 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004050 AT1G48540.1 Outer arm dynein light chain 1 protein 0 Outer arm dynein light chain 1 protein;(source:Araport11) Ipc12G0004060 AT1G25300.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc12G0004070 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc12G0004080 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc12G0004090 AT2G37340.6 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc12G0004100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004110 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004120 AT1G09040.1 0 0 arginine-glutamic acid dipeptide repeat protein;(source:Araport11) Ipc12G0004130 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0004140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004150 AT4G20060.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0004160 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0004170 AT3G18010.1 WUSCHEL related homeobox 1 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages. WUSCHEL related homeobox 1;(source:Araport11) Ipc12G0004180 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc12G0004190 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc12G0004200 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0004210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004220 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0004230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004240 AT5G08390.1 Transducin/WD40 repeat-like superfamily protein One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0004250 AT2G28120.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc12G0004260 #N/A #N/A #N/A #N/A Ipc12G0004270 AT3G18000.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a N-methyltransferase-like protein. Double mutants of NMT1 and NMT3 are defective in leaf, root, flower, seed, and pollen development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0004280 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc12G0004290 AT2G03890.1 phosphoinositide 4-kinase gamma 7 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. The mRNA is cell-to-cell mobile. phosphoinositide 4-kinase gamma 7;(source:Araport11) Ipc12G0004300 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc12G0004310 AT2G04480.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0004330 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004340 AT2G43410.6 0 FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing. RNA binding protein;(source:Araport11) Ipc12G0004350 AT1G07000.1 exocyst subunit exo70 family protein B2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein B2;(source:Araport11) Ipc12G0004360 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004370 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0004380 AT3G55320.1 P-glycoprotein 20 0 P-glycoprotein 20;(source:Araport11) Ipc12G0004390 #N/A #N/A #N/A #N/A Ipc12G0004400 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc04G0000870 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc04G0000860 AT1G12220.3 0 Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc04G0000850 AT4G24640.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Encodes AppB protein (AppB1). Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0000840 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0000830 AT4G24640.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Encodes AppB protein (AppB1). Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0000820 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0000810 AT4G16370.1 oligopeptide transporter Encodes a phloem-specific iron transporter that is essential for systemic iron signaling and redistribution of iron and cadmium. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues. oligopeptide transporter;(source:Araport11) Ipc04G0000800 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc04G0000790 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000780 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0000770 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc04G0000760 AT5G10870.1 chorismate mutase 2 Encodes chorismate mutase AtCM2. chorismate mutase 2;(source:Araport11) Ipc04G0000750 AT3G12460.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0000740 AT2G25870.1 haloacid dehalogenase-like hydrolase family protein Encodes an endoribonuclease that is required for chloroplast rRNA processing. haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc04G0000730 AT3G32400.2 0 0 Actin-binding FH2/DRF autoregulatory protein;(source:Araport11) Ipc04G0000720 AT2G46630.1 0 0 serine/arginine repetitive matrix protein;(source:Araport11) Ipc04G0000710 AT2G35530.1 basic region/leucine zipper transcription factor 16 Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members. basic region/leucine zipper transcription factor 16;(source:Araport11) Ipc04G0000640 AT2G27460.1 sec23/sec24 transport family protein Sec23 homolog , forms a distinct clade with SEC23A.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation. sec23/sec24 transport family protein;(source:Araport11) Ipc04G0000700 AT1G72250.1 Di-glucose binding protein with Kinesin motor domain 0 Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11) Ipc04G0000660 AT4G08840.1 pumilio 11 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 11;(source:Araport11) Ipc04G0000690 AT3G44740.5 0 0 Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc04G0000680 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc04G0000670 AT4G08840.1 pumilio 11 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 11;(source:Araport11) Ipc04G0000650 AT2G27460.1 sec23/sec24 transport family protein Sec23 homolog , forms a distinct clade with SEC23A.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation. sec23/sec24 transport family protein;(source:Araport11) Ipc04G0000630 AT5G20910.1 RING/U-box superfamily protein Encodes an E3 ligase that can interact with and polyubiquitinate ABI3 in vitro. AIP2 likely negatively regulates ABA signaling by targeting ABI3 for post-translational destruction. RING/U-box superfamily protein;(source:Araport11) Ipc04G0000620 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc04G0000610 AT1G80840.1 WRKY DNA-binding protein 40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 40;(source:Araport11) Ipc04G0000600 AT3G20380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc04G0000590 AT2G17265.1 homoserine kinase Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutation of this gene results in higher level of the amino acid homoserine and resistance to downy mildew pathogen Hyaloperonospora arabidopsidis. homoserine kinase;(source:Araport11) Ipc04G0000580 AT3G54980.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0000570 AT5G21280.2 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0000560 AT2G20620.1 Protein of unknown function (DUF626) 0 hypothetical protein (DUF626);(source:Araport11) Ipc04G0000550 #N/A #N/A #N/A #N/A Ipc04G0000540 AT2G26250.1 3-ketoacyl-CoA synthase 10 epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle. 3-ketoacyl-CoA synthase 10;(source:Araport11) Ipc04G0000530 AT1G58260.1 cytochrome p450 79c2 member of CYP79C subfamily of cytochrome p450s. Encodes a putative xylan endohydrolase. similar to some closely linked pseudogenes. cytochrome p450 79c2;(source:Araport11) Ipc04G0000520 AT1G26160.2 0 0 Metal-dependent phosphohydrolase;(source:Araport11) Ipc04G0000510 AT1G22240.1 pumilio 8 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 8;(source:Araport11) Ipc04G0000500 AT1G72250.3 0 0 Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11) Ipc04G0000490 AT1G19210.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0000480 AT5G20180.4 0 0 Ribosomal protein L36;(source:Araport11) Ipc04G0000470 AT2G26270.1 0 0 BRCT domain DNA repair protein;(source:Araport11) Ipc04G0000460 AT3G15680.2 0 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc04G0000450 AT4G32420.6 0 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc04G0000440 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc04G0000430 AT5G25480.1 DNA methyltransferase-2 Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro. DNA methyltransferase-2;(source:Araport11) Ipc04G0000420 AT1G16260.2 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc04G0000410 AT5G25480.1 DNA methyltransferase-2 Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro. DNA methyltransferase-2;(source:Araport11) Ipc04G0000400 AT3G54980.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0000390 AT4G32440.1 Plant Tudor-like RNA-binding protein 0 Plant Tudor-like RNA-binding protein;(source:Araport11) Ipc04G0000380 AT5G55190.1 RAN GTPase 3 A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3;(source:Araport11) Ipc04G0000370 AT1G15440.1 periodic tryptophan protein 2 Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development. periodic tryptophan protein 2;(source:Araport11) Ipc04G0000360 AT5G11420.1 Protein of unknown function, DUF642 0 transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc04G0000350 AT1G41920.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc04G0000340 AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc04G0000330 AT2G26650.1 K+ transporter 1 Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). K+ transporter 1;(source:Araport11) Ipc04G0000320 AT3G07700.3 Protein kinase superfamily protein ABC1K7 is a member of an atypical protein kinase family that is induced by salt stress. Loss of function mutations affect the metabolic profile of chloroplast lipids. It appears to function along with ABC1K8 in mediating lipid membrane changes in response to stress. Protein kinase superfamily protein;(source:Araport11) Ipc04G0000310 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc04G0000300 AT5G25430.1 HCO3- transporter family 0 HCO3- transporter family;(source:Araport11) Ipc04G0000290 AT5G42200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0000280 AT2G26640.1 3-ketoacyl-CoA synthase 11 Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 11;(source:Araport11) Ipc04G0000270 AT1G16680.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0000260 AT4G01200.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc04G0000250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0000240 AT2G38540.1 lipid transfer protein 1 Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 1;(source:Araport11) Ipc04G0000230 AT3G08770.1 lipid transfer protein 6 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 6;(source:Araport11) Ipc04G0000220 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0000210 AT5G59310.1 lipid transfer protein 4 Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 4;(source:Araport11) Ipc04G0000200 AT1G34160.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0000190 AT3G02360.2 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc04G0000180 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000170 AT3G08770.1 lipid transfer protein 6 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 6;(source:Araport11) Ipc04G0000160 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0000150 AT5G17230.3 PHYTOENE SYNTHASE Encodes phytoene synthase that is the rate-limiting enzyme in the carotenoid biosynthetic pathway and that interacts with the ORANGE (OR) protein. PSY's expression is posttransciptionally regulated by OR. PHYTOENE SYNTHASE;(source:Araport11) Ipc04G0000140 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0000130 #N/A #N/A #N/A #N/A Ipc04G0000120 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0000110 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0000100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0000090 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000070 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0000060 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000050 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0000040 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000030 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0000020 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0000010 AT5G59320.1 lipid transfer protein 3 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 3;(source:Araport11) IpcGene01973 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc02G0025120 AT5G37600.1 glutamine synthase clone R1 encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium hypothetical protein;(source:Araport11) Ipc02G0025130 AT2G01670.1 nudix hydrolase homolog 17 0 nudix hydrolase homolog 17;(source:Araport11) Ipc02G0025140 AT5G17190.1 0 0 B-cell receptor-associated-like protein;(source:Araport11) Ipc02G0025150 AT1G70700.2 TIFY domain/Divergent CCT motif family protein JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. The mRNA is cell-to-cell mobile. TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc02G0025160 AT5G37690.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc02G0025170 AT1G74670.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc02G0025180 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025190 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025200 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025210 AT2G22620.3 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025220 AT5G27970.5 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0025230 AT2G22620.3 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025240 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025250 AT2G22620.2 Rhamnogalacturonate lyase family protein 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc02G0025260 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc02G0025270 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc02G0025280 AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0025290 AT5G65590.1 Dof-type zinc finger DNA-binding family protein Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc02G0025300 AT4G39950.1 cytochrome P450, family 79, subfamily B, polypeptide 2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. The mRNA is cell-to-cell mobile. cytochrome P450, family 79, subfamily B, polypeptide 2;(source:Araport11) Ipc02G0025310 AT4G38040.2 0 0 Exostosin family protein;(source:Araport11) Ipc02G0025320 AT1G15960.1 NRAMP metal ion transporter 6 member of Nramp2 family NRAMP metal ion transporter 6;(source:Araport11) Ipc02G0025330 AT2G22590.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0025340 AT3G13230.2 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc02G0025350 AT5G10520.1 ROP binding protein kinases 1 0 ROP binding protein kinases 1;(source:Araport11) Ipc02G0025360 AT5G65500.1 U-box domain-containing protein kinase family protein 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc02G0025370 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0025380 AT5G65495.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0025390 AT2G22570.1 nicotinamidase 1 encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway. nicotinamidase 1;(source:Araport11) Ipc02G0025400 AT2G22560.1 Kinase interacting (KIP1-like) family protein 0 Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc02G0025410 AT4G38060.4 0 0 hypothetical protein;(source:Araport11) Ipc02G0025420 AT5G10490.1 MSCS-like 2 A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSCS-like 2;(source:Araport11) Ipc02G0025430 AT4G24530.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0025440 AT5G65460.4 0 Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1 kinesin like protein for actin based chloroplast movement 2;(source:Araport11) Ipc02G0025450 AT2G22530.1 Alkaline-phosphatase-like family protein 0 Alkaline-phosphatase-like family protein;(source:Araport11) Ipc02G0025460 AT2G01710.1 Chaperone DnaJ-domain superfamily protein SDJ2 functions partially redundantly with SDJ1 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0025480 AT4G38090.1 Ribosomal protein S5 domain 2-like superfamily protein 0 ribosomal protein S5 domain protein;(source:Araport11) Ipc02G0025470 AT1G21740.1 Protein of unknown function (DUF630 and DUF632) 0 DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11) Ipc02G0025490 AT4G24610.1 0 0 pesticidal crystal cry8Ba protein;(source:Araport11) Ipc02G0025500 AT3G02910.1 AIG2-like (avirulence induced gene) family protein 0 AIG2-like (avirulence induced gene) family protein;(source:Araport11) Ipc02G0025510 AT5G65420.1 CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. CYCLIN D4;(source:Araport11) Ipc02G0025520 AT1G35230.1 arabinogalactan protein 5 Encodes arabinogalactan-protein (AGP5). The mRNA is cell-to-cell mobile. arabinogalactan protein 5;(source:Araport11) Ipc02G0025530 AT4G40080.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc02G0025540 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0025550 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0025560 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0025570 AT5G64300.1 GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively The mRNA is cell-to-cell mobile. GTP cyclohydrolase II;(source:Araport11) Ipc02G0025580 AT4G40060.1 homeobox protein 16 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 16;(source:Araport11) Ipc02G0025590 AT2G38100.3 0 Encodes a nitrate transporter that is involved in nitrogen accumulation in embryos. proton-dependent oligopeptide transport (POT) family protein;(source:Araport11) Ipc02G0025600 AT1G07030.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc02G0025610 AT1G28690.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0025620 AT1G03180.5 0 0 non-structural protein;(source:Araport11) Ipc02G0025630 AT2G17500.4 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc02G0025640 AT2G17510.1 ribonuclease II family protein 0 ribonuclease II family protein;(source:Araport11) Ipc02G0025650 AT3G51480.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.6;(source:Araport11) Ipc02G0025660 AT3G51470.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0025670 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0025680 AT4G38250.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc02G0025690 AT1G21630.1 Calcium-binding EF hand family protein TPLATE Adaptor complex subunit. Calcium-binding EF hand family protein;(source:Araport11) Ipc02G0025700 AT4G35500.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0025710 AT2G46110.1 ketopantoate hydroxymethyltransferase 1 Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. ketopantoate hydroxymethyltransferase 1;(source:Araport11) Ipc02G0025720 AT4G35550.1 WUSCHEL related homeobox 13 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WUSCHEL related homeobox 13;(source:Araport11) Ipc02G0025730 AT4G39920.1 C-CAP/cofactor C-like domain-containing protein Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers. C-CAP/cofactor C-like domain-containing protein;(source:Araport11) Ipc02G0025740 AT4G39910.1 ubiquitin-specific protease 3 Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3;(source:Araport11) Ipc02G0025750 AT2G22300.2 signal responsive 1 Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes. signal responsive 1;(source:Araport11) Ipc02G0025760 AT5G10270.1 cyclin-dependent kinase C;1 Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. cyclin-dependent kinase C;(source:Araport11) Ipc02G0025770 AT4G39900.1 0 0 adenine deaminase;(source:Araport11) Ipc02G0025780 AT5G10260.1 RAB GTPase homolog H1E 0 RAB GTPase homolog H1E;(source:Araport11) Ipc02G0025790 AT5G10250.2 0 Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0025800 AT2G45570.1 cytochrome P450, family 76, subfamily C, polypeptide 2 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 2;(source:Araport11) Ipc02G0025810 AT3G22220.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc02G0025820 AT4G39840.1 0 0 cell wall integrity/stress response component-like protein;(source:Araport11) Ipc02G0025830 AT5G10190.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0025840 AT2G30670.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0025850 AT2G29290.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0025860 #N/A #N/A #N/A #N/A Ipc02G0025870 AT1G78080.1 related to AP2 4 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. The mRNA is cell-to-cell mobile. related to AP2 4;(source:Araport11) Ipc02G0025880 AT5G10110.1 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc02G0025890 AT1G55850.1 cellulose synthase like E1 encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase like E1;(source:Araport11) Ipc02G0025900 AT1G55850.1 cellulose synthase like E1 encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase like E1;(source:Araport11) Ipc02G0025910 AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein Encodes a protein, expressed in leaves, with similarity to pollen allergens. The mRNA is cell-to-cell mobile. Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc02G0025920 AT5G10180.1 slufate transporter 2;1 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. slufate transporter 2;(source:Araport11) Ipc02G0025930 AT2G22125.1 binding Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment. The mRNA is cell-to-cell mobile. binding protein;(source:Araport11) Ipc02G0025940 AT4G39690.1 0 Encodes a homolog of the yeast mic60 protein that is localized in the inner membrane of the mitochondrion, interacts with Tom40 as part of a large lipid-enriched complex called the mitochondrial transmembrane lipoprotein complex (MTL) and is involved in mitochondrial lipid trafficking. MICOS complex subunit;(source:Araport11) Ipc02G0025950 AT5G65180.1 ENTH/VHS family protein 0 ENTH/VHS family protein;(source:Araport11) Ipc02G0025960 AT5G65207.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0025970 AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc02G0025980 #N/A #N/A #N/A #N/A Ipc02G0025990 AT5G65210.7 0 Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated. bZIP transcription factor family protein;(source:Araport11) Ipc02G0026000 AT4G39660.1 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate aminotransferase 2 homolog (AGT2). The mRNA is cell-to-cell mobile. alanine:glyoxylate aminotransferase 2;(source:Araport11) Ipc02G0026010 AT5G10010.1 0 0 myosin-H heavy protein;(source:Araport11) Ipc02G0026020 AT5G22730.2 0 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc02G0026030 AT5G64930.1 CPR5 protein, putative Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR). CPR5 protein;(source:Araport11) Ipc02G0026040 AT4G14540.1 nuclear factor Y, subunit B3 0 nuclear factor Y, subunit B3;(source:Araport11) Ipc02G0026050 AT5G09995.2 0 0 transmembrane protein;(source:Araport11) Ipc02G0026060 AT5G64860.1 disproportionating enzyme Encodes a maltotriose-metabolizing enzyme with chloroplastic α-1,4-glucanotransferase activity. Mutant has altered starch degradation. disproportionating enzyme;(source:Araport11) Ipc02G0026070 AT1G56200.1 embryo defective 1303 Encodes a chloroplast localized protein that is essential for chloroplast development. embryo defective 1303;(source:Araport11) Ipc02G0026080 AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc02G0026090 AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc02G0026100 #N/A #N/A #N/A #N/A Ipc02G0026110 AT5G64790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc02G0026120 AT5G64813.3 0 The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.The mRNA is cell-to-cell mobile. Ras-related small GTP-binding family protein;(source:Araport11) Ipc02G0026130 AT1G28690.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0026140 AT1G16850.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0026150 AT4G39460.3 0 Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway. S-adenosylmethionine carrier 1;(source:Araport11) Ipc02G0026160 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc02G0026170 AT4G09830.1 Uncharacterised conserved protein UCP009193 0 nuclear receptor family 2 group C protein;(source:Araport11) Ipc02G0026180 AT4G39380.4 0 0 TSL-kinase interacting-like protein;(source:Araport11) Ipc02G0026190 AT1G54610.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0026200 AT2G22140.1 essential meiotic endonuclease 1B Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes. essential meiotic endonuclease 1B;(source:Araport11) Ipc02G0026210 AT2G17905.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc02G0026220 AT5G50420.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0026230 AT1G60500.1 Dynamin related protein 4C 0 Dynamin related protein 4C;(source:Araport11) Ipc02G0026240 AT5G61890.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc02G0026250 AT2G21790.1 ribonucleotide reductase 1 encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair ribonucleotide reductase 1;(source:Araport11) Ipc02G0026260 AT5G64740.1 cellulose synthase 6 Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The mRNA is cell-to-cell mobile. cellulose synthase 6;(source:Araport11) Ipc02G0026270 AT5G64730.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0026280 AT1G76750.1 Protein of unknown function (DUF1278) Encodes a small cysteine-rich protein that is secreted by the egg cell during gamete interactions. The regulated secretion of EC1 by the egg cell upon sperm-egg interaction is proposed to ensure the appropriate localization of the cell-fusion machinery in distinct sperm membrane domains to accomplish gamete fusion. egg cell-secreted-like protein (DUF1278);(source:Araport11) Ipc02G0026290 AT1G15190.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc02G0026300 AT3G48780.2 0 Encodes one of the two LCB2 subunits (LCB2a and LCB2b) of serine palmitoyltransferase, an enzyme involved in sphingolipid biosynthesis. LCB2a and LCB2b are functional redundant. Double mutants are gametophytic lethal.The mRNA is cell-to-cell mobile. serine palmitoyltransferase 1;(source:Araport11) Ipc02G0026310 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc02G0026320 AT5G09840.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc02G0026330 AT5G64700.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc02G0026340 AT1G67220.1 histone acetyltransferase of the CBP family 2 0 histone acetyltransferase of the CBP family 2;(source:Araport11) Ipc02G0026350 AT4G39320.1 microtubule-associated protein-related 0 microtubule-associated protein-like protein;(source:Araport11) Ipc02G0026360 AT1G76880.1 Duplicated homeodomain-like superfamily protein DF1 is a putative transcription factor required for the synthesis of seed mucilage polysaccharides. The df1 seeds produce almost 50% less mucilage than wild-type, but show less severe defects than the myb5 and ttg2 mutants. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc02G0026370 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0026380 AT5G09820.2 Plastid-lipid associated protein PAP / fibrillin family protein Encodes fibrillin 5 (FBN5). Located in chloroplast stroma. Essential for plastoquinone-9 biosynthesis. Stimulates enzymatic activity of solanesyl diphosphate synthases (SPS) 1 and 2 through binding to solanesyl moiety. Two splicing variants, named FBN5-A shorter one and FBN5-B longer one. FBN5-B is the protein detected in chloroplast stroma. Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc02G0026390 AT3G18790.1 0 0 pre-mRNA-splicing factor ISY1-like protein;(source:Araport11) Ipc02G0026400 AT5G09810.1 actin 7 Member of Actin gene family.Mutants are defective in germination and root growth. The mRNA is cell-to-cell mobile. actin 7;(source:Araport11) Ipc02G0026410 AT1G49230.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0026420 AT4G08250.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc02G0026430 AT3G57560.1 N-acetyl-l-glutamate kinase encodes a N-acetylglutamate kinase, involved in arginine biosynthesis N-acetyl-l-glutamate kinase;(source:Araport11) Ipc02G0026440 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc02G0026450 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc02G0026460 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc02G0026470 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc02G0026480 AT1G49170.1 Protein of unknown function (DUF167) 0 hypothetical protein;(source:Araport11) Ipc02G0026490 AT3G18680.1 Amino acid kinase family protein Encodes a functional UMP Kinase located in the plastid that binds to group II intron plastid transcription products. Mutants show decreased accumulation of target transcripts/proteins. Amino acid kinase family protein;(source:Araport11) Ipc02G0026500 AT3G18690.1 MAP kinase substrate 1 Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators. MAP kinase substrate 1;(source:Araport11) Ipc02G0026510 AT3G18660.2 plant glycogenin-like starch initiation protein 1 Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 1;(source:Araport11) Ipc02G0026520 AT1G48880.1 TRICHOME BIREFRINGENCE-LIKE 7 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 7;(source:Araport11) Ipc02G0026530 AT4G27610.9 0 0 intracellular protein transporter;(source:Araport11) Ipc02G0026540 AT5G64600.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0026550 AT1G48910.1 Flavin-containing monooxygenase family protein A paternally expressed imprinted gene. Flavin-containing monooxygenase family protein;(source:Araport11) Ipc02G0026560 AT5G64070.1 phosphatidylinositol 4-OH kinase beta1 Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs. phosphatidylinositol 4-OH kinase beta1;(source:Araport11) Ipc02G0026570 AT5G64060.1 NAC domain containing protein 103 0 NAC domain containing protein 103;(source:Araport11) Ipc02G0026580 AT2G13690.1 PRLI-interacting factor, putative 0 PRLI-interacting factor;(source:Araport11) Ipc02G0026590 AT1G53570.4 mitogen-activated protein kinase kinase kinase 3 Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens. mitogen-activated protein kinase kinase kinase 3;(source:Araport11) Ipc02G0026600 AT4G19950.1 0 0 polyadenylate-binding protein 1-B-binding protein;(source:Araport11) Ipc02G0026610 AT4G33470.1 histone deacetylase 14 Encodes HDA14, a member of the histone deacetylase family proteins that can deacetylate a-tubulin, associates with a/b-tubulin and is retained on GTP/taxol-stabilized microtubules, at least in part, by direct association with the PP2A-A2 subunit. The association of a histone deacetylase with PP2A suggests a direct link between protein phosphorylation and acetylation. histone deacetylase 14;(source:Araport11) Ipc02G0026620 AT1G77510.1 PDI-like 1-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner. PDI-like 1-2;(source:Araport11) Ipc02G0026630 AT2G34480.2 0 Encodes a nuclear localized member of the ribosomal L18ae/LX protein family. Loss of function mutations show reduced transmission through the gametophytes and embryo lethality. Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc02G0026640 AT2G03200.1 Eukaryotic aspartyl protease family protein Atypical aspartic protease which modulates lateral root development. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0026650 #N/A #N/A #N/A #N/A Ipc02G0026660 AT5G63710.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0026670 AT5G64030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0026680 AT2G13570.1 nuclear factor Y, subunit B7 0 nuclear factor Y, subunit B7;(source:Araport11) Ipc02G0026690 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0026700 AT1G15780.1 0 0 mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11) Ipc02G0026710 AT5G09230.5 sirtuin 2 Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230). sirtuin 2;(source:Araport11) Ipc02G0026720 AT4G33490.2 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0026730 AT1G01720.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. The mRNA is cell-to-cell mobile. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc02G0026740 AT2G28605.1 Photosystem II reaction center PsbP family protein Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side). Photosystem II reaction center PsbP family protein;(source:Araport11) Ipc02G0026750 AT5G08650.1 Small GTP-binding protein 0 Small GTP-binding protein;(source:Araport11) Ipc02G0026760 AT1G75280.1 NmrA-like negative transcriptional regulator family protein isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress. The mRNA is cell-to-cell mobile. NmrA-like negative transcriptional regulator family protein;(source:Araport11) Ipc02G0026770 AT5G63910.1 farnesylcysteine lyase Encodes a farnesylcysteine lyase (EC 1.8.3.5) involved in a salvage /detoxification pathway of farnesylcysteine (FC) residues that are liberated during the degradation of prenylated proteins. Because FC is a competitive inhibitor of prenylcysteine methyltransferases involved in the down-regulation of ABA signaling, fcly mutants with elevated FC levels are hypersensitive to ABA. The protein also appears to be glycosylated when translated in vitro in the presence of microsomal membranes and it likely requires FAD for enzymatic activity. farnesylcysteine lyase;(source:Araport11) Ipc02G0026780 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc02G0026790 AT4G21660.2 proline-rich spliceosome-associated (PSP) family protein 0 proline-rich spliceosome-associated (PSP) family protein;(source:Araport11) Ipc02G0026800 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc02G0026810 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc02G0026820 AT1G34320.2 0 0 Ikzf5 (DUF668);(source:Araport11) Ipc02G0026830 AT5G08630.3 0 0 DDT domain-containing protein;(source:Araport11) Ipc02G0026840 AT5G25060.1 RNA recognition motif (RRM)-containing protein 0 RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc02G0026850 AT2G40980.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0026860 AT5G39100.1 germin-like protein 6 germin-like protein (GLP6) germin-like protein 6;(source:Araport11) Ipc02G0026870 AT5G39100.1 germin-like protein 6 germin-like protein (GLP6) germin-like protein 6;(source:Araport11) Ipc02G0026880 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0026890 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc09G0010420 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0010410 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc09G0010400 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010390 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0010380 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0010370 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0010360 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010340 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc09G0010330 AT1G12220.3 0 Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc09G0010320 AT4G39170.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc09G0010310 AT3G51980.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc09G0010290 AT3G19040.1 histone acetyltransferase of the TAFII250 family 2 Encodes a protein similar to TATA-binding protein-associated factor TAF1 (a.k.a. TAFII250) with histone acetyltransferase activity. It is required in integrating light signals to regulate gene expression and growth. histone acetyltransferase of the TAFII250 family 2;(source:Araport11) Ipc09G0010300 AT1G36180.2 acetyl-CoA carboxylase 2 acetyl-CoA carboxylase 2 (ACC2) The mRNA is cell-to-cell mobile. acetyl-CoA carboxylase 2;(source:Araport11) Ipc05G0025280 AT4G38730.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc05G0025290 AT1G74280.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0025300 AT5G35930.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0025310 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0025320 AT4G03000.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0025330 AT4G08480.1 mitogen-activated protein kinase kinase kinase 9 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. mitogen-activated protein kinase kinase kinase 9;(source:Araport11) Ipc05G0025340 AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1 Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. phosphorylethanolamine cytidylyltransferase 1;(source:Araport11) Ipc05G0025350 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc05G0025360 AT5G60920.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc05G0025370 AT2G37340.6 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc05G0025380 AT5G01015.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0002020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002030 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc04G0002040 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002050 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc04G0002060 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0002070 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002080 AT5G28540.1 heat shock protein 70 (Hsp 70) family protein Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei. heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc04G0002090 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0002100 AT5G02390.3 0 Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc04G0002110 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0002120 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0002130 AT3G06130.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc14G0000770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002150 AT3G06120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) protein that controls meristemoid differentiation during stomatal development. In the absence of MUTE, meristemoids abort after excessive asymmetric divisions and fail to differentiate stomata. MUTE expression in the meristemoid is required for SLGCs differentiation as pavement cells. Epidermal cells lose their competence to respond to MUTE overexpression during cotyledon development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0002160 #N/A #N/A #N/A #N/A Ipc04G0002000 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0002010 AT4G04210.1 plant UBX domain containing protein 4 Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) plant UBX domain containing protein 4;(source:Araport11) Ipc06G0003870 AT4G34110.1 poly(A) binding protein 2 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. The mRNA is cell-to-cell mobile. poly(A) binding protein 2;(source:Araport11) Ipc06G0003860 AT3G14630.1 cytochrome P450, family 72, subfamily A, polypeptide 9 putative cytochrome P450 cytochrome P450, family 72, subfamily A, polypeptide 9;(source:Araport11) Ipc06G0003850 AT5G61220.3 0 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc06G0003840 AT2G16220.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc06G0003830 AT2G45110.1 expansin B4 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B4;(source:Araport11) Ipc06G0003820 AT4G34110.1 poly(A) binding protein 2 Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. The mRNA is cell-to-cell mobile. poly(A) binding protein 2;(source:Araport11) Ipc06G0003810 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc06G0003800 AT5G08520.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc06G0003790 AT1G73710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0003780 AT1G58210.1 kinase interacting family protein Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the plasma membrane. EMBRYO DEFECTIVE protein;(source:Araport11) Ipc06G0003770 AT4G32915.1 0 0 glutamyl-tRNA(Gln) amidotransferase subunit C;(source:Araport11) Ipc06G0003760 AT1G31480.1 shoot gravitropism 2 (SGR2) encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole. shoot gravitropism 2 (SGR2);(source:Araport11) Ipc06G0003750 AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1 0 RAB geranylgeranyl transferase beta subunit 1;(source:Araport11) Ipc06G0003740 AT1G74040.1 2-isopropylmalate synthase 1 Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500). 2-isopropylmalate synthase 1;(source:Araport11) Ipc06G0003730 AT5G08580.2 0 0 Calcium-binding EF hand family protein;(source:Araport11) Ipc06G0003720 AT2G28960.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0003710 AT4G24370.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0003700 #N/A #N/A #N/A #N/A Ipc06G0003690 AT4G04190.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0003680 AT3G20020.1 protein arginine methyltransferase 6 0 protein arginine methyltransferase 6;(source:Araport11) Ipc06G0003670 AT1G27920.1 microtubule-associated protein 65-8 0 microtubule-associated protein 65-8;(source:Araport11) Ipc06G0003660 AT1G09645.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0003650 AT1G09640.1 Translation elongation factor EF1B, gamma chain 0 Translation elongation factor EF1B, gamma chain;(source:Araport11) Ipc06G0003640 AT1G54790.3 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0003630 AT5G24010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0003620 AT1G76680.2 12-oxophytodienoate reductase 1 Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1;(source:Araport11) Ipc06G0003610 AT1G61330.1 FBD, F-box and Leucine Rich Repeat domains containing protein 0 FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc06G0003600 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc06G0003590 AT1G71691.2 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0003580 AT1G33811.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0003570 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0003560 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0003550 AT2G41490.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase UDP-glcnac-adolichol phosphate glcnac-1-p-transferase;(source:Araport11) Ipc06G0003540 AT4G09990.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc06G0003530 AT1G59610.1 dynamin-like 3 A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. The mRNA is cell-to-cell mobile. dynamin-like 3;(source:Araport11) Ipc06G0003520 AT1G09620.1 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases 0 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase;(source:Araport11) Ipc06G0003510 AT1G71520.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0003500 AT3G11940.2 ribosomal protein 5A One of two genes encoding the ribosomal protein S5. Mutants have semi-dominant developmental phenotypes. Most cell-division processes are delayed or disturbed in the heterozygous mutant, and development is completely arrested at an early embryonic stage in the homozygous mutant. ribosomal protein 5A;(source:Araport11) Ipc06G0003490 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0003480 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0003470 AT5G10625.1 0 0 flowering-promoting factor-like protein;(source:Araport11) Ipc06G0003460 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc06G0003450 AT1G22850.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc06G0003440 AT2G21195.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0003430 AT1G12790.1 0 0 DNA ligase-like protein;(source:Araport11) Ipc06G0003420 AT4G10080.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0003410 AT1G60500.1 Dynamin related protein 4C 0 Dynamin related protein 4C;(source:Araport11) Ipc06G0003400 AT1G05160.2 0 Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family. cytochrome P450, family 88, subfamily A, polypeptide 3;(source:Araport11) Ipc06G0003390 AT4G25420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0003380 AT1G02310.2 0 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc06G0003370 AT2G42710.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc06G0003360 AT1G60500.1 Dynamin related protein 4C 0 Dynamin related protein 4C;(source:Araport11) Ipc06G0003350 AT5G51810.1 gibberellin 20 oxidase 2 Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock. gibberellin 20 oxidase 2;(source:Araport11) Ipc06G0003340 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0003330 AT3G10890.1 Glycosyl hydrolase superfamily protein Encodes an endo beta mannanase that is localized to the apoplast and involved in glutathione mediated cadmium tolerance. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc06G0003320 AT5G45510.2 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0003310 AT5G66460.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc06G0003300 AT5G59440.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0003290 AT3G08750.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc06G0003280 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0003270 AT2G22650.1 FAD-dependent oxidoreductase family protein 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc06G0003260 AT1G60500.1 Dynamin related protein 4C 0 Dynamin related protein 4C;(source:Araport11) Ipc06G0003250 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0003240 AT4G10110.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0003230 AT1G71360.1 Galactose-binding protein Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. Galactose-binding protein;(source:Araport11) Ipc06G0003220 AT5G30490.3 0 0 craniofacial development-like protein;(source:Araport11) Ipc06G0003210 AT1G71270.1 Vps52 / Sac2 family Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network. Vps52 / Sac2 family;(source:Araport11) Ipc06G0003200 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc06G0003190 AT5G57900.1 SKP1 interacting partner 1 F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner SKP1 interacting partner 1;(source:Araport11) Ipc06G0003180 AT2G32080.2 purin-rich alpha 1 similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication purin-rich alpha 1;(source:Araport11) Ipc06G0003170 AT3G23480.3 0 0 Cyclopropane-fatty-acyl-phospholipid synthase;(source:Araport11) Ipc06G0003160 AT2G22440.1 0 0 non-LTR retroelement reverse transcriptase;(source:Araport11) Ipc06G0003150 AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0003140 AT1G55550.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0003130 AT3G13410.1 0 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;(source:Araport11) Ipc06G0003120 AT1G72930.2 toll/interleukin-1 receptor-like Toll/interleukin-1 receptor-like protein (TIR) mRNA, toll/interleukin-1 receptor-like protein;(source:Araport11) Ipc06G0003110 AT3G04040.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0003100 AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0003090 AT1G55535.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0003080 AT1G55530.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0003070 AT5G56350.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc06G0003060 AT5G56360.1 calmodulin-binding protein Encodes PSL4, beta-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2. The mRNA is cell-to-cell mobile. calmodulin-binding protein;(source:Araport11) Ipc06G0003050 AT4G10390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0003040 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0003030 AT5G64790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc06G0003020 AT3G13480.2 0 0 nuclear polyadenylated RNA-binding protein;(source:Araport11) Ipc06G0003010 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc06G0003000 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0002990 AT3G13490.1 Lysyl-tRNA synthetase, class II Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. Lysyl-tRNA synthetase, class II;(source:Araport11) Ipc06G0002980 AT5G56520.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0002970 AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0002960 AT5G56530.2 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase (DUF239);(source:Araport11) Ipc06G0002950 AT1G55350.6 0 Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm. calpain-type cysteine protease family;(source:Araport11) Ipc06G0002940 AT3G21250.5 0 member of MRP subfamily multidrug resistance-associated protein 6;(source:Araport11) Ipc06G0002930 AT5G39990.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14A, a beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan. The protein was localized to the Golgi apparatus when transiently expressed in Nicotiana benthamiana. Plays a role in cell elongation during seedling growth. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc06G0002920 AT3G03860.1 APR-like 5 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. The mRNA is cell-to-cell mobile. APR-like 5;(source:Araport11) Ipc06G0002910 AT4G26310.1 elongation factor P (EF-P) family protein 0 elongation factor P (EF-P) family protein;(source:Araport11) Ipc06G0002900 AT5G19760.1 Mitochondrial substrate carrier family protein Encodes a novel mitochondrial carrier capable of transporting both dicarboxylates (such as malate, oxaloacetate, oxoglutarate, and maleate) and tricarboxylates (such as citrate, isocitrate, cis-aconitate, and trans-aconitate). Mitochondrial substrate carrier family protein;(source:Araport11) Ipc06G0002890 AT5G19780.1 tubulin alpha-5 Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication. The mRNA is cell-to-cell mobile. tubulin alpha-5;(source:Araport11) Ipc06G0002880 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0002870 AT3G10250.5 0 0 histidine-tRNA ligase;(source:Araport11) Ipc06G0002860 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0002850 #N/A #N/A #N/A #N/A Ipc06G0002840 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc06G0002830 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc06G0002820 AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc06G0002810 AT3G09150.3 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2) Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2);(source:Araport11) Ipc06G0002800 AT2G18740.2 Small nuclear ribonucleoprotein family protein Putative temperature-specific splice regulator of development. Only the first splice form (PCP-alpha) has this function as result of C-terminal addition. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc06G0002790 AT4G08810.1 calcium ion binding Calcium binding protein involved in cryptochrome and phytochrome coaction calcium ion binding protein;(source:Araport11) Ipc06G0002780 AT4G25650.1 ACD1-like Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment. ACD1-like protein;(source:Araport11) Ipc06G0002770 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc06G0002760 AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein 0 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein;(source:Araport11) Ipc06G0002750 AT1G58250.1 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots. HYPERSENSITIVE TO PI STARVATION 4;(source:Araport11) Ipc06G0002740 AT1G29890.3 0 Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis. O-acetyltransferase family protein;(source:Araport11) Ipc06G0002720 AT5G63690.2 0 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0002730 AT1G58037.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc06G0002710 AT3G13600.2 0 0 calmodulin-binding family protein;(source:Araport11) Ipc06G0002700 AT5G01430.2 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc06G0002690 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0002660 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0002680 AT3G11910.4 0 0 ubiquitin-specific protease 13;(source:Araport11) Ipc06G0002670 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0002650 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0002640 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0002630 AT5G15400.1 U-box domain-containing protein Single copy gene encoding a putative ubiquitin conjugating E4 factor. Contains Ub elongating factor core domain and C-terminal U-box. Involved in ubiquitination of NLRs. U-box domain-containing protein;(source:Araport11) Ipc06G0002620 AT3G13620.1 Amino acid permease family protein Encodes POLYAMINE UPTAKE TRANSPORTER 4, an amino acid permease family protein. Amino acid permease family protein;(source:Araport11) Ipc06G0002610 AT1G55280.1 Lipase/lipooxygenase, PLAT/LH2 family protein 0 Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11) Ipc06G0002590 AT5G17230.4 0 Encodes phytoene synthase that is the rate-limiting enzyme in the carotenoid biosynthetic pathway and that interacts with the ORANGE (OR) protein. PSY Primes expression is posttransciptionally regulated by OR. PHYTOENE SYNTHASE;(source:Araport11) Ipc06G0002600 AT4G02310.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0002580 AT3G58500.1 protein phosphatase 2A-4 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. protein phosphatase 2A-4;(source:Araport11) Ipc06G0002570 AT2G42520.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0002560 AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein SAGL1 is a member of a small family of KELCH domain containing proteins. Loss of function mutants show increased lignin and anthocyanin production suggesting a role in regulation of phenylpropanoid biosynthesis. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0002550 AT2G31600.5 0 0 INO80 complex subunit D-like protein;(source:Araport11) Ipc06G0002540 AT4G20780.1 calmodulin like 42 Calcium sensor involved in trichome branching. calmodulin like 42;(source:Araport11) Ipc06G0002530 AT5G47920.1 0 0 transcription elongation factor;(source:Araport11) Ipc06G0002520 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc06G0002510 AT3G20630.1 ubiquitin-specific protease 14 Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency. ubiquitin-specific protease 14;(source:Araport11) Ipc06G0002500 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc06G0002490 AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc06G0002480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0002470 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0002450 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc06G0002460 AT1G55900.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein component of a translocase in the mitochondrial inner membrane Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc06G0002440 AT3G32940.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc06G0002430 AT1G55250.5 0 Gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. histone mono-ubiquitination 2;(source:Araport11) Ipc06G0002420 AT5G06430.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc06G0002410 AT1G55230.1 Family of unknown function (DUF716) 0 proteinase inhibitor I4, serpin (DUF716);(source:Araport11) Ipc06G0002400 AT1G55230.1 Family of unknown function (DUF716) 0 proteinase inhibitor I4, serpin (DUF716);(source:Araport11) Ipc06G0002390 AT1G55240.1 Family of unknown function (DUF716) 0 proteinase inhibitor I4, serpin (DUF716);(source:Araport11) Ipc06G0002380 #N/A #N/A #N/A #N/A Ipc06G0002370 AT2G40830.4 0 Encodes an E3 ubiquitin ligase for the GA-receptor GID1 that functions as a negative regulator of GA signaling in seedlings and seeds by inducing ubiquitin-dependent proteolysis of GID1s. Tyr321 phosphorylation of GARU by TAGK2 inactivates GARU. RING-H2 finger C1A;(source:Araport11) Ipc06G0002360 AT1G57790.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0002350 AT3G58060.2 0 TP8 is a tonoplast localized member of CDF family of cation transporters. It functions in roots as an Mn transporter.MTP8 transports manganese into root vacuoles of iron-deficient plants and thereby prevents inhibition of iron deficiency-induced ferric chelate reductase by manganese. In seed embryos, MTP8 is responsible for manganese and iron enrichment in the subepidermal cell layer (particularly in vit1 mutant background.) Cation efflux family protein;(source:Araport11) Ipc06G0002340 AT1G55210.2 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc06G0002330 AT5G44660.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0002320 AT4G12020.8 0 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002,7(7):301. protein kinase family protein;(source:Araport11) Ipc06G0002310 AT5G13690.2 0 Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development. alpha-N-acetylglucosaminidase family / NAGLU family;(source:Araport11) Ipc06G0002300 AT5G46550.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc06G0002290 AT3G56150.2 eukaryotic translation initiation factor 3C member of eIF3c - eukaryotic initiation factor 3c eukaryotic translation initiation factor 3C;(source:Araport11) Ipc06G0002280 AT3G60320.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11) Ipc06G0002270 AT1G51110.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc06G0002260 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc06G0002250 #N/A #N/A #N/A #N/A Ipc06G0002240 AT5G19900.5 0 0 PRLI-interacting factor;(source:Araport11) Ipc06G0002230 AT5G19640.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc06G0002220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0002210 AT3G57530.2 0 Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro calcium-dependent protein kinase 32;(source:Araport11) Ipc06G0002200 AT2G05990.2 NAD(P)-binding Rossmann-fold superfamily protein Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0002190 AT3G20760.1 Nse4, component of Smc5/6 DNA repair complex 0 Nse4, component of Smc5/6 DNA repair complex;(source:Araport11) Ipc06G0002180 AT1G51130.1 Nse4, component of Smc5/6 DNA repair complex 0 Nse4, component of Smc5/6 DNA repair complex;(source:Araport11) Ipc06G0002170 AT3G11940.2 ribosomal protein 5A One of two genes encoding the ribosomal protein S5. Mutants have semi-dominant developmental phenotypes. Most cell-division processes are delayed or disturbed in the heterozygous mutant, and development is completely arrested at an early embryonic stage in the homozygous mutant. ribosomal protein 5A;(source:Araport11) Ipc06G0002160 AT5G51970.2 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc06G0002150 AT5G66390.1 Peroxidase superfamily protein Encodes a peroxidase that is involved in lignin biosynthesis. Peroxidase superfamily protein;(source:Araport11) Ipc06G0002140 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc06G0002130 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc06G0002120 AT3G20780.1 topoisomerase 6 subunit B Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation. The hlq (harlequin) dwarf mutant has fewer root hair and leaf trichome. It has abnormal epidermal cell and accumulates callose. topoisomerase 6 subunit B;(source:Araport11) Ipc06G0002110 AT1G20480.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc06G0002100 AT3G51690.1 PIF1 helicase DNA helicase homolog PIF1. PIF1 helicase;(source:Araport11) Ipc06G0002090 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0002080 AT3G57880.4 0 Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region. Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc06G0002070 AT4G14320.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc06G0002060 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc06G0002050 AT1G49990.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0002040 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0002030 AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc06G0002020 AT5G03740.1 histone deacetylase 2C HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression histone deacetylase 2C;(source:Araport11) Ipc06G0002010 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc06G0002000 AT1G73730.2 0 Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro. ETHYLENE-INSENSITIVE3-like 3;(source:Araport11) Ipc06G0001990 AT3G20810.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. jmjd5 mutant plants have a short-period circadian phenotype. JMJD5 has histone demethylase activity and interacts with EFM to repress FT. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0001980 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0001970 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0001960 AT5G12920.4 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0001950 AT1G48430.2 0 0 Dihydroxyacetone kinase;(source:Araport11) Ipc06G0001940 AT5G12920.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0001930 AT3G12900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein S8H hydroxylates scopoletin to generate fraxetin (8-hydroxyscopoletin). Fraxetin and its oxidized analog sideretin (5-hydroxyfraxetin) are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.S8H hydroxylates scopoletin to generate fraxetin (8-hydroxyscopoletin). Fraxetin and its oxidized analog sideretin (5-hydroxyfraxetin) are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0001920 AT1G31320.1 LOB domain-containing protein 4 0 LOB domain-containing protein 4;(source:Araport11) Ipc06G0001910 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc06G0001900 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc06G0001890 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0001880 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0001870 AT5G40330.1 myb domain protein 23 Encodes a MYB gene that, when overexpressed ectopically, can induce ectopic trichome formation. It is a member of subgroup 15, together with WER and GL1. Members of this subgroup share a conserved motif of 19 amino acids in the putative transcription activation domain at the C-terminal end. The gene is expressed in leaves, stems, flowers, seeds and roots and quite strongly in trichomes. There is partial functional redundancy between ATMYB23 and GL1. The two proteins are functionally equivalent with respect to the regulation of trichome initiation but not with respect to trichome branching - which is controlled by MYB23 and not GL1. myb domain protein 23;(source:Araport11) Ipc06G0001860 AT4G12070.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0001850 AT3G49030.2 FBD, F-box and Leucine Rich Repeat domains containing protein 0 FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc06G0001840 AT5G12930.1 0 0 inactive rhomboid protein;(source:Araport11) Ipc06G0001830 AT3G63530.2 RING/U-box superfamily protein Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation. RING/U-box superfamily protein;(source:Araport11) Ipc06G0001820 AT2G23140.4 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc06G0001810 #N/A #N/A #N/A #N/A Ipc06G0001800 AT5G13490.2 ADP/ATP carrier 2 Encodes mitochondrial ADP/ATP carrier ADP/ATP carrier 2;(source:Araport11) Ipc06G0001790 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0001780 AT1G21200.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc06G0001770 AT2G28290.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0001760 AT4G28500.1 NAC domain containing protein 73 0 NAC domain containing protein 73;(source:Araport11) Ipc06G0001750 AT3G20840.1 Integrase-type DNA-binding superfamily protein Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0001740 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc06G0001730 AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc06G0001720 AT5G12950.1 Putative glycosyl hydrolase of unknown function (DUF1680) 0 proline-tRNA ligase (DUF1680);(source:Araport11) Ipc06G0001710 AT1G13190.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0001700 AT1G11950.3 0 0 Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc06G0001690 AT5G12950.1 Putative glycosyl hydrolase of unknown function (DUF1680) 0 proline-tRNA ligase (DUF1680);(source:Araport11) Ipc06G0001680 AT5G44370.1 phosphate transporter 4;6 Encodes an inorganic phosphate transporter (PHT4;6). phosphate transporter 4;(source:Araport11) Ipc06G0001670 AT3G20820.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0001660 AT5G55820.10 0 Encodes a plant ortholog of the inner centromere protein (INCENP), which is implicated in the control of chromosome segregation and cytokinesis in yeast and animals. Required for female gametophytic cell specification and seed development. inner centromere protein, ARK-binding region protein;(source:Araport11) Ipc06G0001650 AT4G15980.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0001640 AT1G74150.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0001630 AT1G27870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0001620 AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0001610 AT5G61190.10 0 0 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein;(source:Araport11) Ipc06G0001600 AT2G47310.1 flowering time control protein-related / FCA gamma-related 0 flowering time control protein-related / FCA gamma-like protein;(source:Araport11) Ipc06G0001590 AT2G36560.1 AT hook motif DNA-binding family protein A paternally expressed imprinted gene. AT hook motif DNA-binding family protein;(source:Araport11) Ipc06G0001580 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc06G0001570 AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein Regulates DNA replication via interaction with BICE1 and MCM7. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc06G0001560 AT4G34890.1 xanthine dehydrogenase 1 Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance. xanthine dehydrogenase 1;(source:Araport11) Ipc06G0001550 AT3G12080.1 GTP-binding family protein Encodes a putative plastid-targeted GTP-binding protein that is essential for embryogenesis and chloroplast development. GTP-binding family protein;(source:Araport11) Ipc06G0001540 AT3G08500.1 myb domain protein 83 Encodes a putative R2R3-type MYB transcription factor (MYB83). myb domain protein 83;(source:Araport11) Ipc06G0001530 AT3G48770.2 0 0 ATP/DNA binding protein;(source:Araport11) Ipc06G0001520 #N/A #N/A #N/A #N/A Ipc06G0001510 AT5G12860.1 dicarboxylate transporter 1 AtpOMT1 encodes dicarboxylate transporter functions both as as an oxaloacetate/malate transporter and as a 2-oxoglutarate/malate transporter. dicarboxylate transporter 1;(source:Araport11) Ipc06G0001500 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc06G0001490 AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0001480 AT5G19855.1 Chaperonin-like RbcX protein Encodes a chloroplast stromal localized RbcX protein that acts as a chaperone in the folding of Rubisco. Chaperonin-like RbcX protein;(source:Araport11) Ipc06G0001470 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0001460 AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0001450 AT3G20920.2 translocation protein-related 0 translocation protein-like protein;(source:Araport11) Ipc06G0001440 AT1G19620.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0001430 AT5G12480.1 calmodulin-domain protein kinase 7 calmodulin-domain protein kinase CDPK isoform 7 (CPK7) calmodulin-domain protein kinase 7;(source:Araport11) Ipc06G0001420 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc06G0001410 AT5G54670.2 0 Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. kinesin 3;(source:Araport11) Ipc06G0001400 AT5G04590.1 sulfite reductase A.thaliana gene encoding sulfite reductase. sulfite reductase;(source:Araport11) Ipc06G0001390 AT5G17240.2 0 0 SET domain group 40;(source:Araport11) Ipc06G0001380 AT1G80880.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0001370 AT1G51405.1 myosin-related 0 myosin-like protein;(source:Araport11) Ipc06G0001360 AT1G51410.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0001350 AT1G79560.2 0 Encodes an FtsH protease that is localized to the chloroplast and is part of a membrane localized translocation motor complex .Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). Mutations in this locus result in embryo lethality. FTSH protease 12;(source:Araport11) Ipc06G0001340 AT5G52660.2 Homeodomain-like superfamily protein Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0001330 AT3G52750.3 0 Nuclear gene that encodes a plastidial division protein (FtsZ2-2). FtsZ2-2 is involved in chloroplast morphology and internal organisation in addition to participating in chloroplast partition Tubulin/FtsZ family protein;(source:Araport11) Ipc06G0001320 AT3G51950.4 0 0 Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc06G0001310 AT4G32450.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0001300 AT4G10800.1 0 0 BTB/POZ domain protein;(source:Araport11) Ipc06G0001290 AT3G60500.3 3'-5'-exoribonuclease family protein Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis. 3-5-exoribonuclease family protein;(source:Araport11) Ipc06G0001280 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc06G0001270 AT4G08310.1 0 0 DNA ligase;(source:Araport11) Ipc06G0001260 AT2G44190.1 Family of unknown function (DUF566) Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo. ENDOSPERM DEFECTIVE protein (DUF566);(source:Araport11) Ipc06G0001250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0001240 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0001230 AT3G21070.2 NAD kinase 1 Encodes a protein with NAD(H) kinase activity. NAD kinase 1;(source:Araport11) Ipc06G0001220 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc06G0001210 AT5G12470.1 Protein of unknown function (DUF3411) 0 UvrABC system C protein, putative (DUF3411);(source:Araport11) Ipc06G0001200 AT5G09950.3 0 Encodes a DYW-class PPR protein required for RNA editing at four sites in mitochondria of A. thaliana. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0001190 AT2G34680.1 Outer arm dynein light chain 1 protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc05G0000600 AT3G08860.1 PYRIMIDINE 4 Encodes a protein that is predicted to have beta-alanine aminotransferase activity. PYRIMIDINE 4;(source:Araport11) Ipc05G0000610 AT3G28150.1 TRICHOME BIREFRINGENCE-LIKE 22 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 22;(source:Araport11) Ipc05G0000620 AT4G29810.1 MAP kinase kinase 2 encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2;(source:Araport11) Ipc05G0000630 AT2G14560.3 0 Encodes LURP1, a member of the LURP cluster (late upregulated in response to Hyaloperonospora parasitica) which exhibits a pronounced upregulation after recognition of the pathogenic oomycte H. parasitica. LURP1 is required for full basal defense to H. parasitica and resistance to this pathogen mediated by the R-proteins RPP4 and RPP5.The mRNA is cell-to-cell mobile. LURP-one-like protein (DUF567);(source:Araport11) Ipc05G0000640 AT4G34140.3 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc05G0000650 AT1G55860.1 ubiquitin-protein ligase 1 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. LOW protein: E3 ubiquitin ligase-like protein;(source:Araport11) Ipc05G0000660 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc05G0000670 AT1G61340.2 F-box family protein Encodes a F-box protein induced by various biotic or abiotic stress. F-box family protein;(source:Araport11) Ipc05G0000680 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc05G0000690 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc05G0000700 AT3G08840.2 D-alanine--D-alanine ligase family 0 D-alanine-D-alanine ligase family;(source:Araport11) Ipc05G0000710 AT2G38440.1 SCAR homolog 2 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype. The mRNA is cell-to-cell mobile. SCAR homolog 2;(source:Araport11) Ipc05G0000720 AT3G43210.5 0 Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. ATP binding microtubule motor family protein;(source:Araport11) Ipc05G0000730 AT5G36250.1 Protein phosphatase 2C family protein Encodes a myristoylated 2C-type protein phosphatase that interacts with the catalytic subunit of SnRK1. The mRNA is cell-to-cell mobile. Protein phosphatase 2C family protein;(source:Araport11) Ipc05G0000740 AT3G10300.6 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0000750 AT2G38360.1 prenylated RAB acceptor 1.B4 0 prenylated RAB acceptor 1.B4;(source:Araport11) Ipc05G0000760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000770 AT2G38310.1 PYR1-like 4 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. The mRNA is cell-to-cell mobile. PYR1-like 4;(source:Araport11) Ipc05G0000780 AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein 0 Ribosomal protein S4 (RPS4A) family protein;(source:Araport11) Ipc05G0000790 AT5G01580.1 gamma interferon responsive lysosomal thiol (GILT) reductase family protein thiol reductase in OAS metabolism gamma interferon responsive lysosomal thiol (GILT) reductase family protein;(source:Araport11) Ipc05G0000800 AT3G03450.1 RGA-like 2 Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. RGA-like 2;(source:Araport11) Ipc05G0000810 AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. MYC2 interacts with EIN3 and EIL1 to repress hook curvature and resistance to Botrytis cinera.Its transcription is induced by dehydration stress, ABA treatment and blue light via CRY1. Negative regulator of blue light-mediated photomorphogenic growth and blue and far-red-light-regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. For example it binds to and regulates the expression of NST1. Its stability is modulated by PUB10 through polyubiquitination. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc05G0000820 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc05G0000830 AT5G01300.1 PEBP (phosphatidylethanolamine-binding protein) family protein 0 PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc05G0000840 AT5G01305.1 0 Encodes a bHLH protein that modulates axillary meristem formation in conjunction with RAX1 and LAS. transcription factor bHLH140-like protein;(source:Araport11) Ipc05G0000850 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc05G0000860 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc05G0000870 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0000890 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0000900 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000910 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0000920 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0000930 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001070 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000980 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001080 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000990 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0000880 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001000 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000940 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001010 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000950 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001020 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000960 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001090 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0001030 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0001040 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0001050 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0001060 #N/A #N/A #N/A #N/A Ipc05G0001100 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0000970 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0001110 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0001120 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0001130 AT1G45191.3 0 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc05G0001140 AT3G45140.1 lipoxygenase 2 Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection. The mRNA is cell-to-cell mobile. lipoxygenase 2;(source:Araport11) Ipc05G0001150 AT3G03810.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc05G0001160 AT4G19130.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc05G0001170 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc05G0001180 AT3G51810.2 0 Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip. Stress induced protein;(source:Araport11) Ipc05G0001190 AT3G51820.1 UbiA prenyltransferase family protein Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP. UbiA prenyltransferase family protein;(source:Araport11) Ipc05G0001200 AT3G08950.1 electron transport SCO1/SenC family protein Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage. electron transport SCO1/SenC family protein;(source:Araport11) Ipc05G0001210 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0001220 AT5G01360.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).The dwarf phenotype can only be seen in tbl3 tbl31 esk1 triple mutant. tbl3 and tbl31 are specifically involved in 3-O-monoacetylation of xylan. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc05G0001230 AT3G47300.1 SELT-like protein precursor 0 SELT-like protein precursor;(source:Araport11) Ipc05G0001240 AT3G49670.1 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc05G0001250 AT5G05570.2 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc05G0001260 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc05G0001270 AT5G05570.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc05G0001280 AT5G09900.1 26S proteasome regulatory subunit, putative (RPN5) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects. 26S proteasome regulatory subunit, putative (RPN5);(source:Araport11) Ipc05G0001290 AT5G05600.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a protein with similarity to flavonol synthases that is involved in the detoxifcation polycyclic aromatic hydrocarbons.One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0001300 AT3G57990.1 0 Encodes a ß-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose. hypothetical protein;(source:Araport11) Ipc05G0001310 AT4G13430.1 isopropyl malate isomerase large subunit 1 Encodes a methylthioalkylmalate isomerase involved in glucosinolate biosynthesis. isopropyl malate isomerase large subunit 1;(source:Araport11) Ipc05G0001320 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0001330 AT1G18260.1 HCP-like superfamily protein Encodes an Arabidopsis homolog of the yeast Hrd3/mammlian Sel1L protein. Involved in ERAD (Endoplasmic reticulum-associated degradation). HCP-like superfamily protein;(source:Araport11) Ipc05G0001340 AT3G11210.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc05G0001350 #N/A #N/A #N/A #N/A Ipc05G0001360 AT3G51870.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc05G0001370 AT5G58770.1 Undecaprenyl pyrophosphate synthetase family protein AtCPT7 synthesizes medium-chain polyprenols of approximately 55 carbons in length. The enzyme utlizes geranylgeranyl pyrophosphate (GGPP) and isopentenyl pyrophosphate (IPP) as substrates. The enzymatic product accumulates into plastdial membranes (DOI:10.1105/tpc.16.00796). Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc05G0001380 AT3G51880.2 high mobility group B1 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated. high mobility group B1;(source:Araport11) Ipc05G0001390 AT5G01530.1 light harvesting complex photosystem II 0 light harvesting complex photosystem II;(source:Araport11) Ipc05G0001400 AT3G08980.4 0 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc05G0001410 AT2G40070.1 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc05G0001420 AT3G09010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0001430 AT5G01270.1 carboxyl-terminal domain (ctd) phosphatase-like 2 Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. carboxyl-terminal domain (ctd) phosphatase-like 2;(source:Araport11) Ipc05G0001440 AT5G01260.2 Carbohydrate-binding-like fold 0 Carbohydrate-binding-like fold;(source:Araport11) Ipc05G0001450 AT2G34150.3 0 Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments. SCAR family protein;(source:Araport11) Ipc05G0001460 AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein 0 mitochondrial ribosomal protein L51/S25/CI-B8 family protein;(source:Araport11) Ipc05G0001470 AT2G38120.1 Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc05G0001480 AT5G49140.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0001490 AT3G07500.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc05G0001500 AT2G38110.1 glycerol-3-phosphate acyltransferase 6 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly. glycerol-3-phosphate acyltransferase 6;(source:Araport11) Ipc05G0001510 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0001520 AT1G52570.3 0 member of C2-PLD subfamily phospholipase D alpha 2;(source:Araport11) Ipc05G0001530 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) Ipc05G0001550 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc05G0001560 AT3G22110.1 20S proteasome alpha subunit C1 Encodes the alpha-3 subunit of 20s proteasome. 20S proteasome alpha subunit C1;(source:Araport11) Ipc05G0001570 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc05G0001540 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) Ipc05G0001580 AT3G09070.1 Protein of unknown function (DUF740) Encodes a polarly localised membrane-associated protein that regulates phloem differentiation entry. LOW protein: UPF0503-like protein, putative (DUF740);(source:Araport11) Ipc05G0001590 AT2G38070.1 Protein of unknown function (DUF740) OPL2 is a homolog of OPS and also shares overlapping expression and functions. opl2/ops double mutants have more severe delay in protophloem development and additionally defects in metaphloem sieve tube development. OPL2 can functionally compensate for lack of OPS when its expression is driven by the OPS promoter. LOW protein: UPF0503-like protein, putative (DUF740);(source:Araport11) Ipc05G0001600 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc05G0001610 AT2G30170.3 0 Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation. Protein phosphatase 2C family protein;(source:Araport11) Ipc05G0001620 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc05G0001630 #N/A #N/A #N/A #N/A Ipc05G0001640 AT5G01160.2 0 Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. RING/U-box superfamily protein;(source:Araport11) Ipc05G0001650 AT1G29010.1 0 0 verprolin;(source:Araport11) Ipc05G0001660 AT2G38025.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc05G0001670 AT5G18770.1 F-box/FBD-like domains containing protein 0 F-box/FBD-like domains containing protein;(source:Araport11) Ipc05G0001680 AT2G38040.2 acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit;(source:Araport11) Ipc05G0001690 AT3G09085.1 Protein of unknown function (DUF962) 0 transmembrane protein (DUF962);(source:Araport11) Ipc05G0001700 AT4G24630.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0001710 AT4G15020.2 hAT transposon superfamily 0 hAT transposon superfamily;(source:Araport11) Ipc05G0001720 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0001730 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0001740 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc05G0001750 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0001760 AT1G11260.1 sugar transporter 1 Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile. sugar transporter 1;(source:Araport11) Ipc05G0001770 AT3G54090.1 fructokinase-like 1 Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription. fructokinase-like 1;(source:Araport11) Ipc05G0001780 AT2G37970.1 SOUL heme-binding family protein 0 SOUL heme-binding family protein;(source:Araport11) Ipc05G0001790 AT5G01090.1 Concanavalin A-like lectin family protein 0 Concanavalin A-like lectin family protein;(source:Araport11) Ipc05G0001800 AT5G26210.1 alfin-like 4 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 4;(source:Araport11) Ipc05G0001810 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc05G0001820 AT5G38390.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc05G0001830 AT1G59640.1 BIG PETAL P A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. transcription factor BIG PETAL P (BPE);(source:Araport11) Ipc05G0001840 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc05G0001850 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc05G0001860 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0001870 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc05G0001880 #N/A #N/A #N/A #N/A Ipc05G0001890 AT3G09230.1 myb domain protein 1 member of MYB3R- and R2R3- type MYB- encoding genes myb domain protein 1;(source:Araport11) Ipc05G0001900 AT3G26100.6 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc05G0001910 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc05G0001920 AT2G29530.2 Tim10/DDP family zinc finger protein Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM9, AtTIM10 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei. Tim10/DDP family zinc finger protein;(source:Araport11) Ipc05G0001930 AT5G59010.1 Protein kinase protein with tetratricopeptide repeat domain 0 kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc05G0001940 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0001950 AT3G54020.1 Arabidopsis Inositol phosphorylceramide synthase 1 Inositol phosphorylceramide synthase Inositol phosphorylceramide synthase 1;(source:Araport11) Ipc05G0001960 AT1G07400.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc05G0001970 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc05G0001980 AT3G09270.1 glutathione S-transferase TAU 8 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 8;(source:Araport11) Ipc05G0001990 AT3G53970.1 proteasome inhibitor-related PTRE1 was identified as homologous to human PI31. It has a conserved proline-rich domain at the C-terminus and a highly conserved FP (Fbxo7/PI31) dimerization domain at the N-terminus as well as some novel, conserved domains found only in plants. It regulates auxin signaling possibly via its proteosome suppressing activity. proteasome inhibitor-like protein;(source:Araport11) Ipc05G0002000 AT4G00750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0002010 AT3G09280.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0002020 AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc05G0002030 AT5G45700.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0002040 AT3G01170.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc05G0002050 AT3G46220.1 0 0 E3 UFM1-protein ligase-like protein;(source:Araport11) Ipc05G0002060 AT3G46220.4 0 0 E3 UFM1-protein ligase-like protein;(source:Araport11) Ipc05G0002070 AT3G01170.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc05G0002080 AT2G37900.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0002090 AT1G53790.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc05G0002100 AT3G53930.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0002110 AT3G53900.2 uracil phosphoribosyltransferase Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders. uracil phosphoribosyltransferase;(source:Araport11) Ipc05G0002120 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0002130 AT4G16215.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0002140 AT1G45249.5 0 Leucine zipper transcription factor that binds to the abscisic acid (ABA)?responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It Primes phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment. abscisic acid responsive elements-binding factor 2;(source:Araport11) Ipc05G0002150 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0002160 AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc05G0002170 AT3G08770.1 lipid transfer protein 6 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 6;(source:Araport11) Ipc05G0002180 AT5G02070.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc05G0002190 #N/A #N/A #N/A #N/A Ipc05G0002200 AT2G19860.1 hexokinase 2 Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses. hexokinase 2;(source:Araport11) Ipc05G0002210 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0002230 AT3G53830.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc05G0002220 AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein TCF1 encodes a member of the RCC1 gene family and is required for chromatin based gene regulation of cold responsive genes in a CBF-independent manner. It is expressed in response to cold but not ABA. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc05G0002240 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0002250 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc05G0002260 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0002270 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0002280 AT3G01580.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0002290 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0002300 AT3G05650.1 receptor like protein 32 0 receptor like protein 32;(source:Araport11) Ipc05G0002310 AT2G39730.1 rubisco activase Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. Involved in jasmonate-induced leaf senescence. rubisco activase;(source:Araport11) Ipc05G0002320 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002330 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0002340 AT2G15180.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0002350 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002360 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002370 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002380 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002390 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002400 AT1G09620.1 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases 0 ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase;(source:Araport11) Ipc05G0002410 #N/A #N/A #N/A #N/A Ipc05G0002420 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002430 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002440 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002450 AT4G05360.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0002460 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002470 AT5G49555.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc05G0002480 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0001570 AT2G23970.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc07G0001560 AT3G14580.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0001550 AT1G17880.1 basic transcription factor 3 0 basic transcription factor 3;(source:Araport11) Ipc07G0001540 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0001530 AT1G67070.2 0 Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene Primes expression pattern is responding to the level of sugar in the cell. Mannose-6-phosphate isomerase, type I;(source:Araport11) Ipc07G0001520 AT3G14580.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0001510 AT5G16800.3 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc07G0001500 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc07G0001490 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc14G0018290 AT4G16260.2 0 Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc14G0018280 AT4G16190.1 Papain family cysteine protease 0 Papain family cysteine protease;(source:Araport11) Ipc14G0018270 AT4G17360.1 Formyl transferase encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle. Formyl transferase;(source:Araport11) Ipc14G0018260 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc01G0026590 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0018250 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0018240 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0018230 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0018220 AT4G17370.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc14G0018210 AT4G17380.1 MUTS-like protein 4 Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination. MUTS-like protein 4;(source:Araport11) Ipc14G0018200 AT2G43090.1 Aconitase/3-isopropylmalate dehydratase protein One of three genes encoding the small subunit of isopropylmalate isomerase, a heterodimer consisting of a large and a small subunit. A function in both leucine biosynthesis and the first cycle of Met chain elongation has been demonstrated for this subunit. The mRNA is cell-to-cell mobile. Aconitase/3-isopropylmalate dehydratase protein;(source:Araport11) Ipc14G0018190 AT5G47430.1 DWNN domain, a CCHC-type zinc finger 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc14G0018180 AT2G33490.3 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0018170 AT5G02350.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc14G0018160 AT4G17420.1 Tryptophan RNA-binding attenuator protein-like 0 Tryptophan RNA-binding attenuator protein-like protein;(source:Araport11) Ipc14G0018150 AT4G16745.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc14G0018140 AT4G15233.5 0 0 ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) Ipc14G0018130 AT5G14750.1 myb domain protein 66 Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). myb domain protein 66;(source:Araport11) Ipc14G0018120 AT5G47400.1 0 0 sphingomyelin phosphodiesterase;(source:Araport11) Ipc14G0018110 AT2G33060.1 receptor like protein 27 0 receptor like protein 27;(source:Araport11) Ipc14G0018100 AT1G03350.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc14G0018090 AT1G60080.1 3'-5'-exoribonuclease family protein 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc14G0018080 AT5G37350.1 Serine/threonine-protein kinase Rio1 0 Serine/threonine-protein kinase Rio1;(source:Araport11) Ipc14G0018070 AT5G47390.1 myb-like transcription factor family protein Encodes a circadian-regulated transcription factor which specifically controls cell expansion during leaf development by controlling ROS homeostasis. The mRNA is cell-to-cell mobile. myb-like transcription factor family protein;(source:Araport11) Ipc14G0018060 AT2G39810.1 ubiquitin-protein ligases A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress. The mRNA is cell-to-cell mobile. ubiquitin-protein ligase;(source:Araport11) Ipc14G0018040 AT4G17440.2 Protein of unknown function (DUF1639) 0 chromogranin (DUF1639);(source:Araport11) Ipc14G0018050 AT3G10280.1 3-ketoacyl-CoA synthase 14 Encodes KCS14, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 14;(source:Araport11) Ipc14G0018030 AT4G02710.1 Kinase interacting (KIP1-like) family protein 0 Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc14G0018020 #N/A #N/A #N/A #N/A Ipc14G0018010 AT3G47790.2 0 0 ABC2 homolog 7;(source:Araport11) Ipc14G0018000 #N/A #N/A #N/A #N/A Ipc14G0017990 AT5G16780.3 0 Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. SART-1 family;(source:Araport11) Ipc14G0017980 AT5G21326.1 Ca2+regulated serine-threonine protein kinase family protein 0 Ca2+regulated serine-threonine protein kinase family protein;(source:Araport11) Ipc14G0017970 AT4G16780.1 homeobox protein 2 Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. The mRNA is cell-to-cell mobile. homeobox protein 2;(source:Araport11) Ipc14G0017960 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0017950 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0017940 AT3G60380.1 0 0 cotton fiber protein;(source:Araport11) Ipc14G0017930 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0017920 AT1G60220.1 UB-like protease 1D Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner. UB-like protease 1D;(source:Araport11) Ipc14G0017910 AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc14G0017900 AT1G55803.1 0 0 ferredoxin-fold anticodon-binding domain protein;(source:Araport11) Ipc14G0017890 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc14G0017880 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0017870 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc14G0017860 AT2G25410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0017850 AT5G47310.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc14G0017840 AT3G02280.3 0 0 Flavodoxin family protein;(source:Araport11) Ipc14G0017830 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0017820 AT5G47240.1 nudix hydrolase homolog 8 0 nudix hydrolase homolog 8;(source:Araport11) Ipc14G0017810 AT5G62670.1 H(+)-ATPase 11 0 H[+]-ATPase 11;(source:Araport11) Ipc14G0017800 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0017790 AT1G15020.3 0 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain. quiescin-sulfhydryl oxidase 1;(source:Araport11) Ipc14G0017780 AT1G65280.2 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc14G0017770 AT1G65280.2 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc14G0017760 AT5G47230.1 ethylene responsive element binding factor 5 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene responsive element binding factor 5;(source:Araport11) Ipc14G0017750 AT1G30490.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Dominant PHV mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Has overlapping functions with PHABULOSA, REVOLUTA and CORONA/ATHB15 in patterning the apical portion of the embryo. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc14G0017740 AT4G12620.1 origin of replication complex 1B Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime. origin of replication complex 1B;(source:Araport11) Ipc14G0017730 AT1G26460.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0017720 AT4G17500.1 ethylene responsive element binding factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene responsive element binding factor 1;(source:Araport11) Ipc14G0017710 AT5G47220.1 ethylene responsive element binding factor 2 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2;(source:Araport11) Ipc14G0017700 AT5G47220.1 ethylene responsive element binding factor 2 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2;(source:Araport11) Ipc14G0017690 AT1G55010.1 plant defensin 1.5 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. plant defensin 1.5;(source:Araport11) Ipc14G0017680 AT4G25140.1 oleosin 1 Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds. oleosin 1;(source:Araport11) Ipc14G0017670 AT4G17510.1 ubiquitin C-terminal hydrolase 3 0 ubiquitin C-terminal hydrolase 3;(source:Araport11) Ipc14G0017660 AT4G16807.1 0 0 ATP-dependent caseinolytic protease/crotonase family protein;(source:Araport11) Ipc14G0017650 AT1G53705.1 aminoacyl-tRNA ligases;nucleotide binding;ATP binding 0 putative aminoacyl-tRNA ligase;(source:Araport11) Ipc14G0017640 AT5G03850.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0017630 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0017620 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc14G0017610 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc14G0017600 AT5G25940.1 early nodulin-related 0 early nodulin-like protein;(source:Araport11) Ipc14G0017590 AT1G79180.1 myb domain protein 63 Member of the R2R3 factor gene family. myb domain protein 63;(source:Araport11) Ipc14G0017580 AT4G17570.3 GATA transcription factor 26 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 26;(source:Araport11) Ipc14G0017570 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0017560 AT2G31960.5 0 encodes a protein similar to callose synthase glucan synthase-like 3;(source:Araport11) Ipc14G0017550 AT4G17010.1 0 0 transcription factor IIIB;(source:Araport11) Ipc14G0017540 AT4G16970.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0017530 AT4G17560.1 Ribosomal protein L19 family protein 0 Ribosomal protein L19 family protein;(source:Araport11) Ipc14G0017520 #N/A #N/A #N/A #N/A Ipc14G0017510 AT4G17550.1 Major facilitator superfamily protein Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Major facilitator superfamily protein;(source:Araport11) Ipc14G0017500 AT5G02890.1 HXXXD-type acyl-transferase family protein. Overexpression causes a glossy phenotype and defects in cuticular wax deposition. OE plants are blocked in very long chain fatty acid elongation (C28 and higher). Encodes a protein with similarity to transferases in plants and fungi. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc14G0017490 AT4G19510.8 0 0 Disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc14G0017480 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0017470 AT5G07490.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0017460 AT4G17530.1 RAB GTPase homolog 1C AtRabD2c encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation. RAB GTPase homolog 1C;(source:Araport11) Ipc14G0017450 AT4G16835.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0017440 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc14G0017430 #N/A #N/A #N/A #N/A Ipc14G0017420 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc14G0017410 AT2G25760.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Protein kinase family protein;(source:Araport11) Ipc14G0017400 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc14G0017390 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc14G0017380 AT1G10240.2 0 0 FAR1-related sequence 11;(source:Araport11) Ipc14G0017370 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0017360 AT3G59470.3 0 Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. FRF1 has been shown to bind the RB-box in vitro. The RB-box contributes to restricting SHOOTMERISTEMLESS expression to the shoot apical meristem. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc14G0017350 AT1G61360.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc14G0017340 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0017330 AT4G16820.1 alpha/beta-Hydrolases superfamily protein Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0017320 AT1G76060.1 LYR family of Fe/S cluster biogenesis protein mutant has Embryo defect LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc14G0017310 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0017300 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0017290 AT2G17870.1 cold shock domain protein 3 Encodes COLD SHOCK DOMAIN PROTEIN 3 (CSP3), involved in the acquisition of freezing tolerance. cold shock domain protein 3;(source:Araport11) IpcGene03171 AT4G21110.2 0 0 G10 family protein;(source:Araport11) IpcGene03173 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) IpcGene03174 AT4G17600.1 Chlorophyll A-B binding family protein Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. The mRNA is cell-to-cell mobile. Chlorophyll A-B binding family protein;(source:Araport11) IpcGene03175 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) IpcGene03177 AT4G30020.4 0 0 PA-domain containing subtilase family protein;(source:Araport11) IpcGene03178 AT4G17610.2 0 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) IpcGene03179 AT3G52900.1 Family of unknown function (DUF662) 0 RAB6-interacting golgin (DUF662);(source:Araport11) IpcGene03180 AT1G10940.1 Protein kinase superfamily protein Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute. Protein kinase superfamily protein;(source:Araport11) IpcGene03181 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) IpcGene03182 AT1G31650.1 RHO guanyl-nucleotide exchange factor 14 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 14;(source:Araport11) IpcGene03183 AT3G20430.1 0 0 phosphorylated adapter RNA export-like protein;(source:Araport11) Ipc06G0000340 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc06G0000330 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc06G0000320 AT5G14860.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0000310 AT2G27040.2 Argonaute family protein AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens including Tobacco rattle virus. Argonaute family protein;(source:Araport11) Ipc06G0000300 AT2G34780.4 0 Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway. maternal effect embryo arrest 22;(source:Araport11) Ipc06G0000290 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0000280 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0000270 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000260 AT4G18820.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc06G0000250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0000240 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc06G0000230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0000220 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0000210 AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia and forms a complex with both AtCBC (cap binding complex) proteins to control alternative splicing. C2H2 zinc-finger protein SERRATE (SE);(source:Araport11) Ipc06G0000200 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000190 AT2G27080.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc06G0000180 AT2G27090.2 0 0 bZIP transcription factor (DUF630 and DUF632);(source:Araport11) Ipc06G0000170 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0000160 AT5G27220.3 0 0 Frigida-like protein;(source:Araport11) Ipc06G0000150 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0000140 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0029540 AT3G48980.2 0 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc13G0021580 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0021600 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0021590 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0021570 #N/A #N/A #N/A #N/A Ipc13G0021560 AT5G04910.1 0 0 DNA repair REX1-B protein;(source:Araport11) Ipc13G0021550 AT5G04930.1 aminophospholipid ATPase 1 Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 1;(source:Araport11) Ipc13G0021540 AT3G03770.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0021530 AT5G04900.1 NYC1-like Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II). NYC1-like protein;(source:Araport11) Ipc13G0021520 AT3G21060.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex that is also involved in the timing of the floral transition. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0021510 AT5G04890.1 HSP20-like chaperones superfamily protein Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0021500 AT2G27140.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0021490 AT5G04890.1 HSP20-like chaperones superfamily protein Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0021480 AT5G04920.1 EAP30/Vps36 family protein 0 EAP30/Vps36 family protein;(source:Araport11) Ipc13G0021470 AT3G04610.4 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc13G0021460 AT5G15020.2 SIN3-like 2 Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). SIN3-like 2;(source:Araport11) Ipc13G0021450 AT1G08800.4 0 0 myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc13G0021440 AT3G04620.1 Alba DNA/RNA-binding protein Target promoter of the male germline-specific transcription factor DUO1. Alba DNA/RNA-binding protein;(source:Araport11) Ipc13G0021430 AT1G30135.1 jasmonate-zim-domain protein 8 0 jasmonate-zim-domain protein 8;(source:Araport11) Ipc13G0021420 AT5G18070.1 phosphoglucosamine mutase-related encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). phosphoglucosamine mutase-like protein;(source:Araport11) Ipc13G0021410 AT3G09080.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0021400 AT1G54460.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc13G0021390 AT3G04720.1 pathogenesis-related 4 Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. The mRNA is cell-to-cell mobile. pathogenesis-related 4;(source:Araport11) Ipc13G0021380 AT5G03120.2 0 0 transmembrane protein;(source:Araport11) Ipc13G0021370 AT3G04720.1 pathogenesis-related 4 Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. The mRNA is cell-to-cell mobile. pathogenesis-related 4;(source:Araport11) Ipc13G0021360 AT3G04720.1 pathogenesis-related 4 Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. The mRNA is cell-to-cell mobile. pathogenesis-related 4;(source:Araport11) Ipc13G0021350 AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli. Xyloglucan endotransglucosylase/hydrolase family protein;(source:Araport11) Ipc13G0021340 AT1G05380.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc13G0021330 AT5G28770.2 bZIP transcription factor family protein BASIC LEUCINE ZIPPER protein which regulates the circadian oscillator gene PSEUDO RESPONSE REGULATOR7 (PRR7) to change the circadian phase in response to sugars. It upregulates PRR7 in response to low energy. bZIP63 and PRR7 are required for correct oscillator phase under light/dark cycles. bZIP protein BZO2H3 mRNA, partial cds bZIP transcription factor family protein;(source:Araport11) Ipc13G0021320 AT3G04740.1 RNA polymerase II transcription mediators encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes. RNA polymerase II transcription mediator;(source:Araport11) Ipc13G0021310 AT5G25150.1 TBP-associated factor 5 Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID). TBP-associated factor 5;(source:Araport11) Ipc13G0021300 AT2G07050.1 cycloartenol synthase 1 Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol. cycloartenol synthase 1;(source:Araport11) Ipc13G0021290 AT2G07050.2 0 Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol. cycloartenol synthase 1;(source:Araport11) Ipc13G0021280 AT5G66770.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc13G0021270 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0021260 AT3G04730.1 indoleacetic acid-induced protein 16 early auxin-induced (IAA16) indoleacetic acid-induced protein 16;(source:Araport11) Ipc13G0021250 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0021240 AT1G05380.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc13G0021230 AT1G55550.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0021220 AT5G28840.2 GDP-D-mannose 3',5'-epimerase Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose. GDP-D-mannose 3,5-epimerase;(source:Araport11) Ipc13G0021210 AT3G06220.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0021200 AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0021190 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0021180 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0021170 AT1G52510.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0021160 AT1G52530.2 0 0 Hus1-like protein;(source:Araport11) Ipc13G0021150 AT1G60690.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc13G0021140 AT5G39775.1 0 0 Gag-Pol polyprotein/retrotransposon;(source:Araport11) Ipc13G0021130 AT5G49570.1 peptide-N-glycanase 1 Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants). peptide-N-glycanase 1;(source:Araport11) Ipc13G0021120 AT4G30290.1 xyloglucan endotransglucosylase/hydrolase 19 Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems. xyloglucan endotransglucosylase/hydrolase 19;(source:Araport11) Ipc13G0021110 AT5G49570.1 peptide-N-glycanase 1 Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants). peptide-N-glycanase 1;(source:Araport11) Ipc13G0021100 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0021090 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc13G0021080 AT3G04780.1 Protein of unknown function (DUF1000) Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein. PITH domain protein (DUF1000);(source:Araport11) Ipc13G0021070 AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0021060 AT3G04790.1 Ribose 5-phosphate isomerase, type A protein 0 Ribose 5-phosphate isomerase, type A protein;(source:Araport11) Ipc13G0021050 AT4G14746.2 0 0 neurogenic locus notch-like protein;(source:Araport11) Ipc13G0021040 AT5G02280.1 SNARE-like superfamily protein Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. SNARE-like superfamily protein;(source:Araport11) Ipc13G0021030 AT1G05600.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0021020 AT5G50280.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0021010 AT5G26710.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0 Glutamyl/glutaminyl-tRNA synthetase, class Ic;(source:Araport11) Ipc13G0021000 AT1G10490.2 0 0 GNAT acetyltransferase (DUF699);(source:Araport11) Ipc13G0020990 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0020970 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc13G0020980 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc13G0020960 AT5G28300.1 Duplicated homeodomain-like superfamily protein Encodes a Ca(2+)-dependent CaM-binding protein. AtGT2L specifically targets the nucleus and possesses both transcriptional activation and DNA-binding abilities, implicating its function as a nuclear transcription factor. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc13G0020950 AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain Member of the Oxa1 super family protein insertases. Involved in biogenesis of mitochondrial respiratory chain complex IV, specifically via membrane insertion of COX2. Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc13G0020940 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0020930 AT3G47090.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0020920 AT3G04830.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc13G0020910 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc13G0020900 AT5G01630.1 BRCA2-like B Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex. BRCA2-like B;(source:Araport11) Ipc13G0020890 AT5G25770.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0020880 AT5G28150.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc13G0020870 AT3G12340.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc13G0020860 AT1G31630.1 AGAMOUS-like 86 0 AGAMOUS-like 86;(source:Araport11) Ipc13G0020850 AT3G07930.4 0 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc13G0020840 AT5G23670.2 long chain base2 Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2;(source:Araport11) Ipc13G0020830 AT5G23670.2 long chain base2 Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2;(source:Araport11) Ipc13G0020820 AT3G50130.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc13G0020810 AT2G46915.2 0 0 DUF3754 family protein, putative (DUF3754);(source:Araport11) Ipc13G0020800 AT2G46915.1 Protein of unknown function (DUF3754) 0 DUF3754 family protein, putative (DUF3754);(source:Araport11) Ipc13G0020790 AT2G46850.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0020780 AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein Encodes a subunit of RNA polymerase III involved in maintaining global RNA homeostasis, not just that of genes transcribed by RNA pol III. RNA polymerase Rpb7 N-terminal domain-containing protein;(source:Araport11) Ipc13G0020770 AT2G46640.2 0 Encodes TAC1 (Tiller Angle Control 1). Influences axillary branch growth angle. Inflorescence stems of TAC1 mutants are vertically oriented and have axillary shoots with narrow branch angles. NAD-dependent protein deacetylase HST1-like protein;(source:Araport11) Ipc13G0020760 AT4G00910.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc13G0020750 AT4G01000.2 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc13G0020740 AT5G42080.4 0 Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. dynamin-like protein;(source:Araport11) Ipc13G0020730 AT3G61770.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc13G0020720 AT1G28710.4 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc13G0020710 AT2G44690.1 Arabidopsis RAC-like 9 A member of ROP GTPase gene family. RAC-like 9;(source:Araport11) Ipc13G0020700 AT1G16120.1 wall associated kinase-like 1 Encodes a WAK-like receptor-like kinase with a cytoplasmic Ser/Thr protein kinase domain and an extracellular domain with EGF-like repeats. wall associated kinase-like 1;(source:Araport11) Ipc13G0020690 AT2G46370.4 Auxin-responsive GH3 family protein Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses. Auxin-responsive GH3 family protein;(source:Araport11) Ipc13G0020680 AT2G46500.2 phosphoinositide 4-kinase gamma 4 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. phosphoinositide 4-kinase gamma 4;(source:Araport11) Ipc13G0020660 AT1G70720.2 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc13G0020670 AT4G22030.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein with a domain protein;(source:Araport11) Ipc13G0020650 AT1G73177.1 bonsai The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development. bonsai;(source:Araport11) Ipc13G0020640 AT3G16710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0020630 AT3G60380.1 0 0 cotton fiber protein;(source:Araport11) Ipc13G0020620 AT1G05940.1 cationic amino acid transporter 9 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. cationic amino acid transporter 9;(source:Araport11) Ipc13G0020610 AT5G62670.1 H(+)-ATPase 11 0 H[+]-ATPase 11;(source:Araport11) Ipc13G0020600 AT1G02090.1 Proteasome component (PCI) domain protein encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype. Proteasome component (PCI) domain protein;(source:Araport11) Ipc13G0020590 AT3G60320.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11) Ipc13G0020580 AT2G44830.3 0 AGCVIII kinase involved in the pulse-induced first positive phototropism. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with BRX, thereby timing PPSE differentiation. Activates PIN-mediated auxin efflux. Protein kinase superfamily protein;(source:Araport11) Ipc13G0020570 AT2G44810.1 alpha/beta-Hydrolases superfamily protein Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0020560 AT1G63490.1 transcription factor jumonji (jmjC) domain-containing protein Histone demethylase belonging to the KDM5/JARID1 family which plays crucial roles in response to dehydration stress and abscisic acid (ABA). Directly binds the chromatin of OPEN STOMATA 1 (OST1) and demethylated H3K4me3 for the regulation of OST1 mRNA abundance, thereby modulating the dehydration stress response. transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc13G0020550 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc13G0020540 AT1G68030.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc13G0020530 AT4G17250.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0020520 AT2G43740.2 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc13G0020510 AT3G60300.1 RWD domain-containing protein 0 RWD domain-containing protein;(source:Araport11) Ipc13G0020500 AT2G24645.2 0 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc13G0020490 AT3G48110.1 glycine-tRNA ligases glycine-tRNA ligase glycine-tRNA ligase;(source:Araport11) Ipc13G0020480 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc13G0020470 AT3G60280.1 uclacyanin 3 Encodes blue copper-binding protein III. uclacyanin 3;(source:Araport11) Ipc13G0020460 AT2G44770.1 ELMO/CED-12 family protein 0 ELMO/CED-12 family protein;(source:Araport11) Ipc13G0020450 AT2G44730.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 0 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11) Ipc13G0020440 AT3G60410.3 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc13G0020430 AT3G60460.1 myb-like HTH transcriptional regulator family protein Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline. myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc13G0020420 AT3G60450.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc13G0020410 AT2G44970.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0020400 AT1G02050.1 Chalcone and stilbene synthase family protein 0 Chalcone and stilbene synthase family protein;(source:Araport11) Ipc13G0020390 AT3G60520.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc13G0020380 AT2G45060.1 Uncharacterised conserved protein UCP022280 0 alanine-tRNA ligase;(source:Araport11) Ipc13G0020370 AT1G02080.2 transcription regulators Acts as scaffold protein in the CCR4-NOT complex, by interacting with various NOT proteins and CAF1. transcription regulator;(source:Araport11) Ipc13G0020360 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc13G0020350 AT2G45080.1 cyclin p3;1 0 cyclin p3;(source:Araport11) Ipc13G0020340 AT3G61520.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0020330 AT1G04300.4 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc13G0020320 AT5G59180.1 DNA-directed RNA polymerase II Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7 DNA-directed RNA polymerase II;(source:Araport11) Ipc13G0020310 AT3G60580.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc13G0020300 AT5G09850.5 0 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc13G0020290 AT2G45140.1 plant VAP homolog 12 Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. The mRNA is cell-to-cell mobile. plant VAP homolog 12;(source:Araport11) Ipc13G0020280 AT1G73440.1 calmodulin-related 0 calmodulin-like protein;(source:Araport11) Ipc13G0020270 AT2G36560.1 AT hook motif DNA-binding family protein A paternally expressed imprinted gene. AT hook motif DNA-binding family protein;(source:Araport11) Ipc13G0020260 AT5G59180.1 DNA-directed RNA polymerase II Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7 DNA-directed RNA polymerase II;(source:Araport11) Ipc13G0020250 AT5G23535.2 0 0 KOW domain-containing protein;(source:Araport11) Ipc13G0020240 AT3G60680.1 Plant protein of unknown function (DUF641) 0 DUF641 family protein (DUF641);(source:Araport11) Ipc13G0020230 AT3G60720.1 plasmodesmata-located protein 8 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. plasmodesmata-located protein 8;(source:Araport11) Ipc13G0020220 AT1G54560.2 0 Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc13G0020210 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc13G0020200 AT3G61220.1 NAD(P)-binding Rossmann-fold superfamily protein CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0020190 AT3G61220.1 NAD(P)-binding Rossmann-fold superfamily protein CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0020180 AT4G00155.1 0 0 retrotransposon Gag;(source:Araport11) Ipc13G0020170 #N/A #N/A #N/A #N/A Ipc13G0020160 AT2G45510.1 cytochrome P450, family 704, subfamily A, polypeptide 2 member of CYP704A cytochrome P450, family 704, subfamily A, polypeptide 2;(source:Araport11) Ipc13G0020150 AT2G45520.1 0 0 coiled-coil protein;(source:Araport11) Ipc13G0020140 AT2G45540.6 0 0 WD-40 repeat family protein / beige-like protein;(source:Araport11) Ipc13G0020130 AT1G08500.1 early nodulin-like protein 18 0 early nodulin-like protein 18;(source:Araport11) Ipc13G0020120 AT3G61050.2 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0020110 AT2G45610.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0020100 AT3G02280.3 0 0 Flavodoxin family protein;(source:Araport11) Ipc13G0020090 AT3G61130.1 galacturonosyltransferase 1 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase 1;(source:Araport11) Ipc13G0020080 AT1G01920.2 SET domain-containing protein 0 SET domain-containing protein;(source:Araport11) Ipc13G0020070 AT3G13770.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0020060 AT5G07250.1 RHOMBOID-like protein 3 0 RHOMBOID-like protein 3;(source:Araport11) Ipc13G0020050 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0020040 AT5G05670.2 signal recognition particle binding 0 signal recognition particle binding protein;(source:Araport11) Ipc13G0020030 AT4G30440.1 UDP-D-glucuronate 4-epimerase 1 Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. UDP-D-glucuronate 4-epimerase 1;(source:Araport11) Ipc13G0020020 AT1G34220.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc13G0020010 AT2G29040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc13G0020000 AT3G57785.1 0 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein;(source:Araport11) Ipc13G0019990 AT2G01770.1 vacuolar iron transporter 1 Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane. vacuolar iron transporter 1;(source:Araport11) Ipc13G0019980 AT1G12600.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc13G0019970 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0019960 AT1G33010.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0019950 AT1G01880.3 0 Encodes one of two GEN1 homologs in Arabidopsis. It is a member of the class IV Rad2/XPG family of nucleases that processes Holliday junctions in a manner analogous to the HJ resolvases of phages, archaea, and bacteria. 5-3 exonuclease family protein;(source:Araport11) Ipc13G0019940 AT4G01890.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0019930 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc13G0019920 AT2G04420.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0019910 AT2G45720.5 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0019900 AT3G61060.1 phloem protein 2-A13 0 phloem protein 2-A13;(source:Araport11) Ipc13G0019890 AT1G20225.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc13G0019880 AT5G61790.1 calnexin 1 0 calnexin 1;(source:Araport11) Ipc13G0019870 AT3G23290.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc13G0019860 AT4G00740.2 0 Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0019850 AT1G24267.1 Protein of unknown function (DUF1664) 0 bZIP transcription factor, putative (DUF1664);(source:Araport11) Ipc13G0019840 AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development. Loss of function mutants have increased cell wall polysaccharide content. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc13G0019830 AT4G17240.2 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc13G0019820 AT4G02260.2 RELA/SPOT homolog 1 Displays guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity but not guanosine-3',5'-bis(diphosphate) 3'-diphosphate synthase activity. RELA/SPOT homolog 1;(source:Araport11) Ipc13G0019810 AT4G00720.1 shaggy-like protein kinase 32 Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway. shaggy-like protein kinase 32;(source:Araport11) Ipc13G0019800 AT2G07678.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0019790 AT2G45770.1 signal recognition particle receptor protein, chloroplast (FTSY) chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. signal recognition particle receptor protein, chloroplast (FTSY);(source:Araport11) Ipc13G0019780 AT3G61200.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc13G0019770 AT1G01950.1 armadillo repeat kinesin 2 Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules. armadillo repeat kinesin 2;(source:Araport11) Ipc13G0019760 AT1G67330.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc13G0019750 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc13G0019740 AT3G60860.1 SEC7-like guanine nucleotide exchange family protein Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. The mRNA is cell-to-cell mobile. SEC7-like guanine nucleotide exchange family protein;(source:Araport11) Ipc13G0019730 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0019720 AT3G55270.1 mitogen-activated protein kinase phosphatase 1 Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation. mitogen-activated protein kinase phosphatase 1;(source:Araport11) Ipc13G0019710 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0019700 AT4G00210.1 LOB domain-containing protein 31 0 LOB domain-containing protein 31;(source:Araport11) Ipc13G0019690 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc13G0019680 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0019670 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0019660 AT2G45400.1 NAD(P)-binding Rossmann-fold superfamily protein involved in the regulation of brassinosteroid metabolic pathway NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0019650 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc13G0019640 AT2G45380.3 0 0 myeloid leukemia factor;(source:Araport11) Ipc13G0019630 AT2G45340.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0019620 AT2G45330.2 RNA 2'-phosphotransferase, Tpt1 / KptA family 0 RNA 2-phosphotransferase, Tpt1 / KptA family;(source:Araport11) Ipc13G0019610 AT4G00110.1 UDP-D-glucuronate 4-epimerase 3 Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. UDP-D-glucuronate 4-epimerase 3;(source:Araport11) Ipc13G0019600 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc13G0019590 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0019580 AT1G02020.1 nitroreductase family protein 0 nitroreductase family protein;(source:Araport11) Ipc13G0019570 AT1G04520.1 plasmodesmata-located protein 2 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. plasmodesmata-located protein 2;(source:Araport11) Ipc13G0019560 AT3G61230.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc13G0019550 AT1G01770.1 0 0 propionyl-CoA carboxylase;(source:Araport11) Ipc13G0019540 #N/A #N/A #N/A #N/A Ipc13G0019530 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0019520 AT4G00660.2 RNAhelicase-like 8 0 RNAhelicase-like 8;(source:Araport11) Ipc13G0019510 AT4G00270.1 DNA-binding storekeeper protein-related transcriptional regulator GeBP is a non canonical, nuclear localized leucine zipper transcription factor that binds G-elements.It is strongly expressed in the vegetative meristem and leaf primordium. It regulates genes down stream of a number of signaling pathways including hormone and defense responses. DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc13G0019500 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0019480 AT3G24650.1 AP2/B3-like transcriptional factor family protein Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230). AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0019490 AT4G36420.1 Ribosomal protein L12 family protein 0 Ribosomal protein L12 family protein;(source:Araport11) Ipc13G0019470 AT3G61250.1 myb domain protein 17 LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family. myb domain protein 17;(source:Araport11) Ipc13G0019460 AT1G01750.1 actin depolymerizing factor 11 0 actin depolymerizing factor 11;(source:Araport11) Ipc13G0019450 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc13G0019440 AT4G30380.1 Barwin-related endoglucanase Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. Barwin-related endoglucanase;(source:Araport11) Ipc13G0019430 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0019420 AT4G30380.2 0 Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. Barwin-related endoglucanase;(source:Araport11) Ipc13G0019410 AT5G16680.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc13G0019400 AT1G01730.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0019390 AT5G44500.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc13G0019380 AT3G49050.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0019370 AT4G23340.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc13G0019360 AT3G24315.1 Sec20 family protein 0 Sec20 family protein;(source:Araport11) Ipc13G0019350 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0019340 AT1G10180.1 0 0 LOW protein: exocyst complex component-like protein;(source:Araport11) Ipc13G0019330 AT1G54940.1 plant glycogenin-like starch initiation protein 4 Encodes a xylan glucuronosyltransferase. plant glycogenin-like starch initiation protein 4;(source:Araport11) Ipc13G0019320 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc13G0019310 AT1G77140.1 vacuolar protein sorting 45 A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face. vacuolar protein sorting 45;(source:Araport11) Ipc13G0019300 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0019290 AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein involved in mitochondrial RNA editing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0019280 AT4G00440.5 0 0 GPI-anchored adhesin-like protein, putative (DUF3741);(source:Araport11) Ipc13G0019270 #N/A #N/A #N/A #N/A Ipc13G0019260 AT1G01690.3 0 Encodes a novel plant-specific protein that is involved in meiotic double strand break formation. putative recombination initiation defects 3;(source:Araport11) Ipc13G0019250 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0019240 AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 0 SIGNAL PEPTIDE PEPTIDASE-LIKE 4;(source:Araport11) Ipc13G0019230 AT1G01610.1 glycerol-3-phosphate acyltransferase 4 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly and is functionally redundant with GPAT8. glycerol-3-phosphate acyltransferase 4;(source:Araport11) Ipc13G0019220 AT2G45990.2 0 0 ribosomal RNA small subunit methyltransferase G;(source:Araport11) Ipc13G0019210 AT2G46000.1 0 0 LDL receptor wingless signaling/trafficking chaperone;(source:Araport11) Ipc13G0019200 AT3G61440.1 cysteine synthase C1 Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. The mRNA is cell-to-cell mobile. cysteine synthase C1;(source:Araport11) Ipc13G0019190 AT2G46020.4 0 Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. transcription regulatory protein SNF2;(source:Araport11) Ipc13G0019180 AT4G00350.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc13G0019170 AT4G00340.1 receptor-like protein kinase 4 Encodes a receptor-like protein kinase that is expressed in roots. receptor-like protein kinase 4;(source:Araport11) Ipc13G0019160 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc13G0019150 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc13G0019140 AT2G46050.1 Pentatricopeptide repeat (PPR-like) superfamily protein E-PPR protein involved in mitochondrial RNA editing.It is involved in editing of the mitochondrial tatC transcript at site 581. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0019130 AT4G00330.2 0 high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2;(source:Araport11) Ipc13G0019120 AT5G28350.1 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 0 Quinoprotein amine dehydrogenase, beta chain-like;(source:Araport11) Ipc13G0019110 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0019100 AT1G48380.1 root hair initiation protein root hairless 1 (RHL1) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A. root hair initiation protein root hairless 1 (RHL1);(source:Araport11) Ipc13G0019090 AT5G19750.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc13G0019080 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc13G0019070 AT1G01580.1 ferric reduction oxidase 2 Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. ferric reduction oxidase 2;(source:Araport11) Ipc13G0019060 #N/A #N/A #N/A #N/A Ipc13G0019050 AT2G27800.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0019040 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc13G0019030 AT3G17300.3 0 0 COMPLEX 1 LYR-like protein;(source:Araport11) Ipc13G0019020 AT1G01580.1 ferric reduction oxidase 2 Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. ferric reduction oxidase 2;(source:Araport11) Ipc13G0019010 AT2G46080.1 0 Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal. BPS1-like protein;(source:Araport11) Ipc13G0019000 AT4G29440.2 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc13G0018990 AT3G61490.3 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0018980 AT1G01500.1 Erythronate-4-phosphate dehydrogenase family protein 0 Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11) Ipc13G0018970 AT3G04480.1 endoribonucleases 0 endoribonuclease;(source:Araport11) Ipc13G0018960 AT1G01490.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc13G0018950 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc13G0018940 AT5G47020.1 0 0 MraZ;(source:Araport11) Ipc13G0018930 AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0018920 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0018910 AT3G61510.1 ACC synthase 1 Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity. ACC synthase 1;(source:Araport11) Ipc13G0018900 AT4G01270.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0018890 AT1G79220.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc13G0018880 AT4G01250.1 WRKY family transcription factor AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence. WRKY family transcription factor;(source:Araport11) Ipc13G0018870 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc13G0018860 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0018850 AT1G49350.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc13G0018840 AT3G18840.3 0 0 LOW protein: PPR containing-like protein;(source:Araport11) Ipc13G0018830 AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0018820 AT2G46160.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0018810 AT5G06350.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0018800 AT4G11220.1 VIRB2-interacting protein 2 0 VIRB2-interacting protein 2;(source:Araport11) Ipc13G0018790 AT2G46170.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc13G0018780 AT5G52900.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc13G0018770 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc13G0018760 AT2G46225.1 ABI-1-like 1 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins. ABI-1-like 1;(source:Araport11) Ipc13G0018750 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0018740 AT3G03530.1 non-specific phospholipase C4 PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. non-specific phospholipase C4;(source:Araport11) Ipc13G0018730 AT4G01210.1 glycosyl transferase family 1 protein 0 glycosyl transferase family 1 protein;(source:Araport11) Ipc13G0018720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0018710 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc13G0018700 AT2G35490.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc13G0018690 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc13G0018680 AT2G46170.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc13G0018670 AT4G01240.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0018660 AT3G61550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0018650 AT5G11920.2 6-&1-fructan exohydrolase Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. 6-%261-fructan exohydrolase;(source:Araport11) Ipc13G0018640 AT3G07960.3 0 Encodes phosphatidylinositol-4-phosphate 5-kinase 6 (PIP5K6). Regulates clathrin-dependent endocytosis in pollen tubes. Phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc13G0018630 AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0018620 AT4G04320.1 malonyl-CoA decarboxylase family protein 0 malonyl-CoA decarboxylase family protein;(source:Araport11) Ipc13G0018610 AT3G61520.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0018600 AT4G01150.1 0 0 CURVATURE THYLAKOID 1A-like protein;(source:Araport11) Ipc13G0018590 AT4G01140.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc13G0018580 AT4G27230.2 histone H2A 2 Encodes HTA2, a histone H2A protein. histone H2A 2;(source:Araport11) Ipc13G0018570 AT1G27210.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0018560 AT5G27220.3 0 0 Frigida-like protein;(source:Araport11) Ipc13G0018550 AT5G02740.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc13G0018540 AT5G62760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0018530 AT2G46270.3 0 encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3??s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. G-box binding factor 3;(source:Araport11) Ipc13G0018520 AT3G61610.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc13G0018510 AT2G46300.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0018500 AT1G64230.5 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc13G0018490 AT1G50470.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc13G0018480 AT4G01100.1 adenine nucleotide transporter 1 Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration. adenine nucleotide transporter 1;(source:Araport11) Ipc13G0018470 AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc13G0018460 AT3G10950.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc13G0018450 AT2G18360.2 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0009340 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc09G0009330 AT3G60190.1 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E;(source:Araport11) Ipc09G0009320 AT5G26667.4 0 encodes a uridine 5 Prime-monophosphate (UMP)/cytidine 5 Prime-monophosphate (CMP) kinase.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0009310 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0009300 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0009280 AT5G17640.1 Protein of unknown function (DUF1005) Expression of this gene is induced by abscisic acid and salt stress. nuclear factor 1 A-type protein (DUF1005);(source:Araport11) Ipc09G0009290 #N/A #N/A #N/A #N/A Ipc09G0009270 AT5G17640.1 Protein of unknown function (DUF1005) Expression of this gene is induced by abscisic acid and salt stress. nuclear factor 1 A-type protein (DUF1005);(source:Araport11) Ipc09G0009260 #N/A #N/A #N/A #N/A Ipc09G0009250 AT5G17610.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009240 AT1G49245.1 Prefoldin chaperone subunit family protein 0 Prefoldin chaperone subunit family protein;(source:Araport11) Ipc09G0009230 AT1G79910.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc09G0009220 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc09G0009210 AT3G16840.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0009200 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0009190 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0009180 AT5G56160.2 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc09G0009170 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc09G0009160 AT5G23035.1 Putative membrane lipoprotein Encodes a defensin-like (DEFL) family protein. Putative membrane lipoprotein;(source:Araport11) Ipc09G0009150 AT3G58140.1 phenylalanyl-tRNA synthetase class IIc family protein 0 phenylalanyl-tRNA synthetase class IIc family protein;(source:Araport11) Ipc09G0009140 AT5G58900.1 Homeodomain-like transcriptional regulator R-R-type MYB protein Homeodomain-like transcriptional regulator;(source:Araport11) Ipc09G0009130 AT5G25290.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein (DUF295);(source:Araport11) Ipc09G0009120 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc09G0009110 AT1G42700.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009100 AT5G22780.2 0 0 Adaptor protein complex AP-2, alpha subunit;(source:Araport11) Ipc09G0009090 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc09G0009080 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc09G0009070 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc09G0009060 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009050 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc09G0009040 AT1G09230.2 0 Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc09G0009030 #N/A #N/A #N/A #N/A Ipc09G0009020 AT2G45500.5 0 0 AAA-type ATPase family protein;(source:Araport11) Ipc09G0009010 AT4G25160.1 U-box domain-containing protein kinase family protein Encodes a U-box domain-containing E3 ubiquitin ligase with central Ser/Thr protein kinase domain whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. U-box domain-containing protein kinase family protein;(source:Araport11) Ipc09G0009000 AT2G32540.1 cellulose synthase-like B4 encodes a gene similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase-like B4;(source:Araport11) Ipc09G0008990 AT1G23760.1 BURP domain-containing protein Encodes aromatic rich glycoprotein JP630. BURP domain-containing protein;(source:Araport11) Ipc09G0008980 AT1G23760.1 BURP domain-containing protein Encodes aromatic rich glycoprotein JP630. BURP domain-containing protein;(source:Araport11) Ipc09G0008970 AT1G60390.1 polygalacturonase 1 0 polygalacturonase 1;(source:Araport11) Ipc09G0008960 AT1G54560.1 Myosin family protein with Dil domain Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc09G0008950 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc09G0008940 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc09G0008930 AT5G59150.1 RAB GTPase homolog A2D 0 RAB GTPase homolog A2D;(source:Araport11) Ipc09G0008920 AT1G60390.1 polygalacturonase 1 0 polygalacturonase 1;(source:Araport11) Ipc09G0008910 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0008900 AT3G09570.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc09G0008890 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc09G0008880 AT2G43540.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0008870 AT5G34870.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0008860 AT4G37650.1 GRAS family transcription factor Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT-ROOT forms a network in combination with JACKDAW, BLUEJAY AND SCARECROW to regulate tissue patterning through asymmetric cell division. The ground tissue lineage remains in shortroot mutant, while it is progressively lost in the triple mutant bluejay jackdaw scarecrow and double mutant jackdaw scarecrow. In addition, ground tissue basal identity remains in shortroot mutant while it is defective in the quadruple mutant bluejay jackdaw magpie nutcracker. GRAS family transcription factor;(source:Araport11) Ipc09G0008660 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc09G0008850 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008840 AT3G59390.2 0 0 glycosyltransferase family protein;(source:Araport11) Ipc09G0008830 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0008820 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008810 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc09G0008800 AT2G31510.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc09G0008790 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008770 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) IpcGene03807 AT2G04940.1 scramblase-related 0 scramblase-like protein;(source:Araport11) IpcGene03808 #N/A #N/A #N/A #N/A IpcGene03810 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) IpcGene03811 #N/A #N/A #N/A #N/A IpcGene03812 AT3G24670.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) IpcGene03814 AT3G18750.4 0 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 6;(source:Araport11) IpcGene03815 AT1G63120.1 RHOMBOID-like 2 AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2;(source:Araport11) IpcGene03820 AT5G62100.2 BCL-2-associated athanogene 2 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 2;(source:Araport11) Ipc09G0008440 AT4G22890.3 PGR5-LIKE A Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). The mRNA is cell-to-cell mobile. PGR5-LIKE A;(source:Araport11) Ipc09G0008450 AT1G12560.1 expansin A7 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell and involved in root hair elongation. expansin A7;(source:Araport11) Ipc09G0008460 AT4G22920.2 0 Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves. Acts antagonistically with SGR2 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells. non-yellowing 1;(source:Araport11) Ipc09G0008470 AT2G45660.1 AGAMOUS-like 20 Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA. AGAMOUS-like 20;(source:Araport11) Ipc09G0008480 #N/A #N/A #N/A #N/A Ipc09G0008490 AT4G11860.1 Protein of unknown function (DUF544) 0 FAM63A-like protein (DUF544);(source:Araport11) Ipc09G0008500 AT1G62990.1 KNOTTED-like homeobox of Arabidopsis thaliana 7 Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46. homeobox knotted-like protein;(source:Araport11) Ipc09G0008510 AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase 0 nucleotide-rhamnose synthase/epimerase-reductase;(source:Araport11) Ipc09G0008520 AT2G21790.1 ribonucleotide reductase 1 encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair ribonucleotide reductase 1;(source:Araport11) Ipc09G0008530 #N/A #N/A #N/A #N/A Ipc09G0008540 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0008550 AT1G12600.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc09G0008560 AT3G13850.1 LOB domain-containing protein 22 0 LOB domain-containing protein 22;(source:Araport11) Ipc09G0008570 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc09G0008580 AT1G12520.1 copper chaperone for SOD1 Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. copper chaperone for SOD1;(source:Araport11) Ipc09G0008590 AT1G73970.1 0 0 obscurin-like protein;(source:Araport11) Ipc09G0008600 AT5G10560.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc09G0008610 AT2G03330.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0008620 AT1G62960.1 ACC synthase 10 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. ACC synthase 10;(source:Araport11) Ipc09G0008630 AT1G12460.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0008640 AT4G22830.1 0 0 YCF49-like protein;(source:Araport11) Ipc09G0008650 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc10G0016980 AT1G52990.2 0 0 thioredoxin family protein;(source:Araport11) Ipc10G0016990 AT3G10860.2 0 0 Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11) Ipc10G0017000 AT1G06840.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0017020 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc10G0016700 AT5G58290.1 regulatory particle triple-A ATPase 3 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, regulatory particle triple-A ATPase 3;(source:Araport11) Ipc10G0017030 AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0017040 AT1G11200.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc10G0017050 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017060 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0017070 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0017080 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc10G0016750 AT1G56320.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016770 AT5G37360.1 0 0 LOW protein: ammonium transporter 1-like protein;(source:Araport11) Ipc10G0016790 AT2G30490.1 cinnamate-4-hydroxylase Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development. cinnamate-4-hydroxylase;(source:Araport11) Ipc10G0017100 AT2G30470.1 high-level expression of sugar-inducible gene 2 HSI2 is a member of the ABI3 family of B3 domain proteins and functions as an active repressor of the Spo minimal promoter through the EAR motif. It contains a plant-specific B3 DNA-binding domain. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain. HSI2 is also an epigenetic repressor as it also contains functional plant homeodomain-like (PHD-L) and zinc-finger Cys- and Trp-containing (CW) domains associated with epigenetic regulation. The PHD-L domain of HSI2 is connected to promoting trimethylation of Lys-27 on histone 3 (H3K27me3), while the CW domain can bind directly to H3K4me3. Through these domains, HSI2 represses the seed maturation program during seed germination by repressing transcription of the core LAFL (LEC1, ABI3, FUS3, and LEC2) seed developmental transcriptional regulators. In developing A. thaliana embryos, HSI2 suppresses expression of a large number of genes, many identified as targets of FUS3. However, the absence of HSI2 had no effect on transcript levels of the LAFL regulators and the levels of measured metabolites and phytohormones (ABA, auxin, and JA derivatives) in developing Arabidopsis embryos. HSI2 likely fine-tunes seed maturation by repressing genes involved in early embryogenesis that are not required later for seed maturation and desiccation. B3 domain-containing transcription repressor VAL1;(source:Araport11) Ipc10G0017110 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc10G0017130 AT5G58340.2 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc10G0017140 AT1G06900.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc10G0016850 AT1G06890.2 nodulin MtN21 /EamA-like transporter family protein UXT3 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc10G0017150 AT4G13320.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016880 AT3G51620.2 PAP/OAS1 substrate-binding domain superfamily 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc10G0017160 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc10G0017170 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc10G0017190 AT1G16520.1 0 NAI1 interacting protein, involved in ER body and vesicle formation. interactor of constitutive active ROPs protein;(source:Araport11) Ipc10G0017200 AT5G01840.1 ovate family protein 1 Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. ovate family protein 1;(source:Araport11) Ipc10G0017210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017220 AT2G30370.3 0 Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2. allergen-like protein;(source:Araport11) Ipc10G0017240 AT1G60680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc10G0017260 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0017270 AT2G30350.2 Excinuclease ABC, C subunit, N-terminal 0 Excinuclease ABC, C subunit, N-terminal;(source:Araport11) Ipc10G0017280 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc10G0017290 AT5G59940.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc10G0017300 AT1G75640.1 Leucine-rich receptor-like protein kinase family protein Encodes a Leucine-Rich Repeat Receptor-Like Kinase MUSTACHES (MUS). Regulates stomatal bilateral symmetry. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc10G0017310 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0017320 AT2G40470.1 LOB domain-containing protein 15 LOB-domain containing protein. Involved in regulation of xylem differentiation- acts as a regulator of VND7 which is a master regulator of xylem cell differentiation. LOB domain-containing protein 15;(source:Araport11) Ipc10G0017330 AT3G62360.2 0 0 Carbohydrate-binding-like fold;(source:Araport11) Ipc10G0017340 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc10G0017350 #N/A #N/A #N/A #N/A Ipc10G0017360 AT1G09040.1 0 0 arginine-glutamic acid dipeptide repeat protein;(source:Araport11) Ipc10G0017370 AT2G30020.1 Protein phosphatase 2C family protein Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6. Protein phosphatase 2C family protein;(source:Araport11) Ipc10G0017380 AT5G42540.1 exoribonuclease 2 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. exoribonuclease 2;(source:Araport11) Ipc10G0017390 AT5G58590.1 RAN binding protein 1 Encodes a Ran-binding protein 1 homolog (RanBP1). RAN binding protein 1;(source:Araport11) Ipc10G0017400 AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc10G0017410 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc10G0017420 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0017430 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc10G0017440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017450 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0017460 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc10G0017470 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017500 AT2G30090.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc10G0017510 #N/A #N/A #N/A #N/A Ipc10G0017520 AT3G51780.1 BCL-2-associated athanogene 4 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 4;(source:Araport11) Ipc10G0017530 AT5G58530.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc10G0017540 AT2G30110.1 ubiquitin-activating enzyme 1 Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. ubiquitin-activating enzyme 1;(source:Araport11) Ipc10G0017550 AT5G12020.1 17.6 kDa class II heat shock protein 0 17.6 kDa class II heat shock protein;(source:Araport11) Ipc10G0017560 AT4G27090.1 Ribosomal protein L14 0 Ribosomal protein L14;(source:Araport11) Ipc10G0017570 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017580 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0017590 AT3G42960.1 TAPETUM 1 Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells. TAPETUM 1;(source:Araport11) Ipc03G0000960 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017600 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0017610 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc10G0017620 AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 0 zinc finger CCCH domain-containing protein 44;(source:Araport11) Ipc10G0017630 AT1G07090.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc10G0017640 AT1G07080.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc10G0017650 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc10G0017660 AT5G58470.2 TBP-associated factor 15B 0 TBP-associated factor 15B;(source:Araport11) Ipc10G0017670 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017680 AT4G37310.1 cytochrome P450, family 81, subfamily H, polypeptide 1 member of CYP81H cytochrome P450, family 81, subfamily H, polypeptide 1;(source:Araport11) Ipc10G0017690 AT1G14580.2 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc10G0017700 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0017710 AT2G30120.4 0 0 protein FLC EXPRESSOR;(source:Araport11) Ipc10G0017720 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0017740 AT5G02740.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc10G0017750 AT1G07050.1 CCT motif family protein FITNESS encodes a protein with a single CCT domain and belongs to the CCT motif family genes (CMF). FITNESS acts upstream JUB1 thereby controlling H2O2 levels. FITNESS has a role in cellular redox homeostasis controlling H2O2 levels, due to changes in enzymes, metabolites and transcripts related to ROS detoxification. CCT motif family protein;(source:Araport11) Ipc10G0017760 AT1G07030.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc10G0017770 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0017780 AT5G01200.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc10G0017800 #N/A #N/A #N/A #N/A Ipc10G0017810 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0017820 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc10G0017830 AT5G07120.2 0 Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole. sorting nexin 2B;(source:Araport11) Ipc10G0017840 AT2G38360.1 prenylated RAB acceptor 1.B4 0 prenylated RAB acceptor 1.B4;(source:Araport11) Ipc10G0017850 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc10G0017860 AT5G58430.1 exocyst subunit exo70 family protein B1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein B1;(source:Araport11) Ipc10G0017870 AT2G31960.4 0 encodes a protein similar to callose synthase glucan synthase-like 3;(source:Araport11) Ipc10G0017880 #N/A #N/A #N/A #N/A Ipc10G0017890 AT2G30230.1 0 0 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc10G0017900 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017910 AT2G30260.1 U2 small nuclear ribonucleoprotein B encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus. U2 small nuclear ribonucleoprotein B;(source:Araport11) Ipc10G0017920 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0017930 AT1G60680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc10G0017940 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0017950 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc10G0017960 AT2G36240.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc10G0017970 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0017980 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0017990 AT5G38210.3 0 0 Protein kinase family protein;(source:Araport11) Ipc10G0018000 #N/A #N/A #N/A #N/A Ipc10G0018010 ATMG00520.1 Intron maturase, type II family protein 0 Intron maturase, type II family protein;(source:Araport11) Ipc10G0018020 AT3G47340.1 glutamine-dependent asparagine synthase 1 encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. glutamine-dependent asparagine synthase 1;(source:Araport11) Ipc10G0018030 AT1G44414.1 0 0 zinc-ribbon domain protein;(source:Araport11) Ipc10G0018040 AT5G58600.1 Plant protein of unknown function (DUF828) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein (DUF828);(source:Araport11) Ipc10G0018050 AT5G58610.4 0 0 PHD finger transcription factor;(source:Araport11) Ipc10G0018060 AT1G78810.3 0 0 hypothetical protein;(source:Araport11) Ipc10G0018070 AT2G30000.1 PHF5-like protein 0 PHF5-like protein;(source:Araport11) Ipc10G0018080 AT2G40116.1 Phosphoinositide-specific phospholipase C family protein 0 Phosphoinositide-specific phospholipase C family protein;(source:Araport11) Ipc10G0018090 AT2G35120.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc10G0018100 AT2G47430.1 Signal transduction histidine kinase Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte. Signal transduction histidine kinase;(source:Araport11) Ipc10G0018110 AT2G35120.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc10G0018120 AT2G35130.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018130 AT2G35130.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018140 AT5G41940.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc10G0018150 AT1G23310.2 glutamate:glyoxylate aminotransferase Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. glutamate:glyoxylate aminotransferase;(source:Araport11) Ipc10G0000140 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc01G0026330 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc01G0026320 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc01G0026310 AT5G48385.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc01G0026300 AT4G05040.7 0 0 ankyrin repeat family protein;(source:Araport11) Ipc01G0026290 AT5G05560.1 E3 ubiquitin ligase, putative Encodes a subunit of the Arabidopsis thaliana E3 ubiquitin ligase complex that plays a synergistic role with APC4 both in female gametogenesis and in embryogenesis. E3 ubiquitin ligase;(source:Araport11) Ipc01G0026280 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0026270 AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc01G0026260 AT3G25040.1 endoplasmic reticulum retention defective 2B Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling. The mRNA is cell-to-cell mobile. endoplasmic reticulum retention defective 2B;(source:Araport11) Ipc01G0026250 AT5G55160.1 small ubiquitin-like modifier 2 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. small ubiquitin-like modifier 2;(source:Araport11) Ipc01G0026240 AT2G32760.1 0 Homolog of yeast VPS38P. Interacts with PI3K.Mutants have defects in late endosome morphology and retromer function. UV radiation resistance-associated protein;(source:Araport11) Ipc01G0026230 AT5G26749.2 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc01G0026220 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0026210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026200 AT2G32730.1 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 0 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit;(source:Araport11) Ipc01G0026190 AT3G55600.2 0 0 Membrane fusion protein Use1;(source:Araport11) Ipc01G0026180 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0026170 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0026160 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc01G0026150 AT1G64940.1 cytochrome P450, family 87, subfamily A, polypeptide 6 member of CYP89A cytochrome P450, family 87, subfamily A, polypeptide 6;(source:Araport11) Ipc01G0026140 AT5G57190.1 phosphatidylserine decarboxylase 2 Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast. phosphatidylserine decarboxylase 2;(source:Araport11) Ipc01G0026130 AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein 0 ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11) Ipc01G0026120 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0026110 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0026100 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0026090 #N/A #N/A #N/A #N/A Ipc01G0026080 AT4G15610.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc01G0026070 AT5G18660.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0026060 AT2G39080.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0026050 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0026040 AT1G69910.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0026030 AT1G54610.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0026020 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0026010 AT2G21420.1 IBR domain containing protein 0 IBR domain containing protein;(source:Araport11) Ipc01G0026000 AT5G18670.1 beta-amylase 3 putative beta-amylase BMY3 (BMY3) beta-amylase 3;(source:Araport11) Ipc01G0025990 AT2G47900.3 tubby like protein 3 Member of plant TLP family which differs in having an F box domain. Plasma membrane tethering is mediated by PIP2 binding domain. Under abiotic stress TLP3 detaches from the PM and translocates to the nucleus. Mutants are insensitive to ABA. tubby like protein 3;(source:Araport11) Ipc01G0025980 AT4G00750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0025970 AT1G71040.1 Cupredoxin superfamily protein Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability. Cupredoxin superfamily protein;(source:Araport11) Ipc01G0025960 AT2G15000.3 0 0 caspase-6 protein;(source:Araport11) Ipc01G0025950 AT4G34270.1 TIP41-like family protein TOR signaling pathway protein. TIP41-like family protein;(source:Araport11) Ipc01G0025940 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0025930 AT2G43210.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc01G0025920 AT1G30140.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc01G0025910 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025900 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025890 AT3G05030.4 0 Encodes a vacuolar K+/H+ exchanger essential for active K+ uptake at the tonoplast and involved in regulating stomatal closure. sodium hydrogen exchanger 2;(source:Araport11) Ipc01G0025880 AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc01G0025870 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0025860 AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain 0 Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein;(source:Araport11) Ipc01G0025850 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0025840 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0025830 AT3G29180.3 0 0 DUF1336 family protein (DUF1336);(source:Araport11) Ipc01G0025820 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025810 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025800 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0025790 AT3G06868.1 0 0 vitellogenin-like protein;(source:Araport11) Ipc01G0025780 AT1G14830.1 DYNAMIN-like 1C Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts. DYNAMIN-like 1C;(source:Araport11) Ipc01G0025770 AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc01G0025760 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025750 AT3G15920.1 Phox (PX) domain-containing protein 0 Phox (PX) domain-containing protein;(source:Araport11) Ipc01G0025740 AT3G04950.1 0 0 SEC-C motif protein;(source:Araport11) Ipc01G0025730 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc01G0025720 AT4G00900.2 0 Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm. ER-type Ca2+-ATPase 2;(source:Araport11) Ipc01G0025710 AT3G60320.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11) Ipc01G0025700 AT4G15920.1 Nodulin MtN3 family protein Encodes a vacuolar fructose transporter expressed in parenchyma and xylem that controls leaf fructose content. When its expression is reduced, fructose accumulates in leaves. Nodulin MtN3 family protein;(source:Araport11) Ipc01G0025690 AT3G06860.1 multifunctional protein 2 Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes. The mRNA is cell-to-cell mobile. multifunctional protein 2;(source:Araport11) Ipc01G0025680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025670 AT4G15930.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc01G0025660 AT5G07270.1 XB3 ortholog 3 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc01G0025650 ATCG00490.1 ribulose-bisphosphate carboxylases large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ribulose-bisphosphate carboxylase;(source:Araport11) Ipc04G0002720 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0002700 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0002710 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc04G0002690 AT3G24160.1 putative type 1 membrane protein Encodes a putative Type 1 membrane protein (PMP). putative type 1 membrane protein;(source:Araport11) Ipc04G0002680 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0003090 AT3G06330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0002670 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc04G0002660 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0002650 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002640 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0002620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0012500 AT1G28240.1 Protein of unknown function (DUF616) 0 strawberry notch protein (DUF616);(source:Araport11) Ipc12G0012510 AT3G15354.3 0 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. SPA1-related 3;(source:Araport11) Ipc12G0012520 AT4G27480.3 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc12G0012530 AT1G28280.2 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc12G0012540 AT5G53870.1 early nodulin-like protein 1 0 early nodulin-like protein 1;(source:Araport11) Ipc12G0012550 AT3G15290.1 3-hydroxyacyl-CoA dehydrogenase family protein 0 3-hydroxyacyl-CoA dehydrogenase family protein;(source:Araport11) Ipc12G0012560 AT1G53160.2 squamosa promoter binding protein-like 4 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. squamosa promoter binding protein-like 4;(source:Araport11) Ipc12G0012570 AT3G15250.1 0 0 TPRXL;(source:Araport11) Ipc12G0012580 AT5G53900.2 Serine/threonine-protein kinase WNK (With No Lysine)-related 0 Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11) Ipc12G0012590 AT3G15220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0012600 AT5G53930.1 0 0 transcriptional regulator ATRX-like protein;(source:Araport11) Ipc12G0012610 AT5G53940.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc12G0012620 AT1G53170.1 ethylene response factor 8 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene response factor 8;(source:Araport11) Ipc12G0012630 AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc12G0012640 AT5G53970.1 Tyrosine transaminase family protein Encodes a cytosolic tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment. AtTAT1 prefers Tyr as an amino donor but can also use Phe, Trp, His, Met, and Leu. The mRNA is cell-to-cell mobile. Tyrosine transaminase family protein;(source:Araport11) Ipc12G0012650 AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a PPR (pentatricopeptide repeat) protein PDM1/SEL1. Involved in RNA editing and splicing of plastid genes. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0012660 AT5G57850.2 0 ADCL encodes a protein that acts as a 4-amino-4-deoxychorismate lyase. It catalyzes the production 4-aminobenzoate (pABA) production which is required for folate biosynthesis. The enzyme localizes to chloroplasts based on an import assay and GFP localization experiments. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc12G0012670 AT3G15120.2 0 Encodes BRP1, an ATPase domain-containing protein that interacts with BRAT1 to negatively regulate transcriptional silencing at methylated genomic regions. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0012680 AT3G15095.1 0 Encodes HCF243 (high chlorophyll fluorescence), a chloroplast-localized protein involved in the D1 protein stability of the photosystem II complex1. Serine/Threonine-kinase pakA-like protein;(source:Araport11) Ipc12G0012690 AT3G15095.3 0 Encodes HCF243 (high chlorophyll fluorescence), a chloroplast-localized protein involved in the D1 protein stability of the photosystem II complex1. Serine/Threonine-kinase pakA-like protein;(source:Araport11) Ipc12G0012700 AT3G15090.1 GroES-like zinc-binding alcohol dehydrogenase family protein 0 GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc12G0012710 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0012720 AT1G53190.2 RING/U-box superfamily protein Encodes a RING-type E3 ligase that positively regulates CIN-like TCP activity to promote leaf development by mediating the degradation of the TCP repressor TIE1. RING/U-box superfamily protein;(source:Araport11) Ipc12G0012730 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc12G0012740 AT3G58120.1 Basic-leucine zipper (bZIP) transcription factor family protein Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc12G0012750 AT2G24720.1 glutamate receptor 2.2 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.2;(source:Araport11) Ipc12G0012760 AT5G11180.2 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.6;(source:Araport11) Ipc12G0012770 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc12G0012780 AT4G27330.1 sporocyteless (SPL) Encodes a putative transcription factor that is required for the initiation of both micro- and megagametogenesis and is expressed in the sporogenous tissue of the anther and the ovule. SPL is a chalaza identity gene that share overlapping functions in establishing the prospective chalaza of the ovule. It also plays a central role in patterning both the proximal-distal and the adaxial-abaxial axes in the ovule and generally interacts with YABBY proteins in vitro. Mutant is defective in the differentiation of primary sporogenous cells into microsporocytes, and does not properly form the anther wall. Regulator of anther cell differenctiation. Interacts with TPL and TCP proteins. sporocyteless (SPL);(source:Araport11) Ipc12G0012790 AT1G06230.4 0 This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4;(source:Araport11) Ipc12G0012800 AT1G73160.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0012810 AT1G06230.4 0 This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4;(source:Araport11) Ipc12G0012820 AT1G53240.1 Lactate/malate dehydrogenase family protein mMDH1 encodes a mitochrondrial malate dehydrogenase. It is expressed at higher levels than the other mitochrondrial isoform mMDH2 (At3G15020) according to transcript and proteomic analyses. Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc12G0012830 AT5G20040.1 isopentenyltransferase 9 Encodes tRNA isopentenyltransferase AtIPT9. isopentenyltransferase 9;(source:Araport11) Ipc12G0012840 AT1G02370.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0012850 AT2G31130.6 0 0 hypothetical protein;(source:Araport11) Ipc12G0012860 AT3G15000.1 cobalt ion binding Encodes RIP1 (RNA-editing factor interacting protein 1). Involved in chloroplast and mitochondrial RNA editing. The mRNA is cell-to-cell mobile. cobalt ion binding protein;(source:Araport11) Ipc12G0012870 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0012880 AT1G16670.1 Protein kinase superfamily protein Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress. Protein kinase superfamily protein;(source:Araport11) Ipc12G0012890 AT1G53280.1 Class I glutamine amidotransferase-like superfamily protein Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal. Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc12G0012910 AT3G14980.3 0 IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc12G0012900 AT5G22130.3 0 member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc12G0012920 AT1G53290.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc12G0012930 AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile. tetratricopetide-repeat thioredoxin-like 1;(source:Araport11) Ipc12G0012940 AT1G78870.2 ubiquitin-conjugating enzyme 35 UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. The mRNA is cell-to-cell mobile. ubiquitin-conjugating enzyme 35;(source:Araport11) Ipc12G0012950 AT2G45300.4 0 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisThe mRNA is cell-to-cell mobile. RNA 3-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta;(source:Araport11) Ipc12G0012960 AT3G50930.1 cytochrome BC1 synthesis Encodes a protein that is present in a homo-multimeric protein complex on the outer mitochondrial membrane and plays a role in cell death and amplifying salicylic acid signalling. The mRNA is cell-to-cell mobile. cytochrome BC1 synthesi;(source:Araport11) Ipc12G0012970 AT3G50940.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0012980 AT1G16900.1 Alg9-like mannosyltransferase family Encodes the Arabidopsis ortholog of the yeast/human ALG9 catalyzing the luminal addition of two alpha-1,2 Man residues in assembling Glc3Man9GlcNAc2. Alg9-like mannosyltransferase family;(source:Araport11) Ipc12G0012990 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc12G0013000 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc12G0013010 AT1G78810.3 0 0 hypothetical protein;(source:Araport11) Ipc12G0013020 AT3G58680.1 multiprotein bridging factor 1B One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. The mRNA is cell-to-cell mobile. multiprotein bridging factor 1B;(source:Araport11) Ipc12G0013030 AT1G53320.1 tubby like protein 7 Member of plant TLP family. TLP7 is tethered to the PM but detaches upon stimulus and translocates to the nucleus. Has DNA binding activity but lacks conservation of the transcription activation domain. tubby like protein 7;(source:Araport11) Ipc12G0013040 AT4G18690.1 0 0 delay of germination protein;(source:Araport11) Ipc12G0013050 AT1G16916.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0013060 AT1G78780.5 0 0 pathogenesis-related family protein;(source:Araport11) Ipc12G0013070 AT5G17020.1 exportin 1A Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes. exportin 1A;(source:Araport11) Ipc12G0013080 AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0013090 AT3G14870.3 Plant protein of unknown function (DUF641) 0 hypothetical protein (DUF641);(source:Araport11) Ipc12G0013100 AT1G78680.1 gamma-glutamyl hydrolase 2 The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole. gamma-glutamyl hydrolase 2;(source:Araport11) Ipc12G0013110 AT5G12970.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein 0 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc12G0013120 AT5G62380.2 0 Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. NAC-domain protein 101;(source:Araport11) Ipc12G0013130 AT1G53430.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0013140 AT1G53440.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0013150 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0013160 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0013170 AT3G14850.2 TRICHOME BIREFRINGENCE-LIKE 41 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 41;(source:Araport11) Ipc12G0013180 AT2G30900.2 0 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 43;(source:Araport11) Ipc12G0013190 AT1G78710.1 TRICHOME BIREFRINGENCE-LIKE 42 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 42;(source:Araport11) Ipc12G0013200 AT1G33260.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0013210 AT1G78600.1 light-regulated zinc finger protein 1 0 light-regulated zinc finger protein 1;(source:Araport11) Ipc12G0013220 AT1G53490.1 RING/U-box superfamily protein Encodes HEI10, a RING finger-containing protein. HEI10 belongs to a group of proteins well conserved among species known as ZMM. Required for class I crossover formation. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc12G0013230 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0013240 AT1G78580.4 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. trehalose-6-phosphate synthase;(source:Araport11) Ipc12G0013250 AT1G78570.1 rhamnose biosynthesis 1 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. rhamnose biosynthesis 1;(source:Araport11) Ipc12G0013260 AT1G78560.1 Sodium Bile acid symporter family Chloroplast inner membrane, pantothenate transporter. Sodium Bile acid symporter family;(source:Araport11) Ipc12G0013270 AT1G17030.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0013280 AT1G17160.1 pfkB-like carbohydrate kinase family protein RBSK is a plastid localized ribokinase involved in nucleoside metabolism. It is the only member of this gene family in Arabidopsis. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc12G0013290 AT1G53670.1 methionine sulfoxide reductase B 1 0 methionine sulfoxide reductase B 1;(source:Araport11) Ipc12G0013300 AT1G53520.1 Chalcone-flavanone isomerase family protein Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc12G0013310 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0013320 AT3G14610.1 cytochrome P450, family 72, subfamily A, polypeptide 7 putative cytochrome P450 cytochrome P450, family 72, subfamily A, polypeptide 7;(source:Araport11) Ipc12G0013330 AT1G17080.1 Ribosomal protein L18ae family 0 Ribosomal protein L18ae family;(source:Araport11) Ipc12G0013340 AT1G53580.1 glyoxalase II 3 Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site. glyoxalase II 3;(source:Araport11) Ipc12G0013350 AT2G02955.1 maternal effect embryo arrest 12 0 maternal effect embryo arrest 12;(source:Araport11) Ipc12G0013360 AT1G53590.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc12G0013370 AT3G14580.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0013380 AT3G14560.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0013400 AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0013390 #N/A #N/A #N/A #N/A Ipc12G0013410 AT1G30040.1 gibberellin 2-oxidase Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. gibberellin 2-oxidase;(source:Araport11) Ipc12G0013420 AT1G78430.1 ROP interactive partner 2 Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 2;(source:Araport11) Ipc12G0013430 AT1G78420.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0013440 AT3G14450.1 CTC-interacting domain 9 RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain. CTC-interacting domain 9;(source:Araport11) Ipc12G0013450 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc12G0013460 AT1G67930.1 Golgi transport complex protein-related 0 Golgi transport complex protein-like protein;(source:Araport11) Ipc12G0013470 AT3G14440.1 nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. nine-cis-epoxycarotenoid dioxygenase 3;(source:Araport11) Ipc12G0013480 AT1G31660.1 0 Encodes a protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and male and female gametophyte development. bystin-like protein;(source:Araport11) Ipc12G0013490 AT3G14420.2 Aldolase-type TIM barrel family protein Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. The mRNA is cell-to-cell mobile. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc12G0013500 AT3G14400.1 ubiquitin-specific protease 25 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 25;(source:Araport11) Ipc12G0013510 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc12G0013520 AT1G72280.1 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum oxidoreductin endoplasmic reticulum oxidoreductins 1;(source:Araport11) Ipc12G0013530 AT1G17220.1 Translation initiation factor 2, small GTP-binding protein Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. The mRNA is cell-to-cell mobile. Translation initiation factor 2, small GTP-binding protein;(source:Araport11) Ipc12G0013540 AT1G17210.1 IAP-like protein 1 0 IAP-like protein 1;(source:Araport11) Ipc12G0013550 AT5G48330.2 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc12G0013560 AT1G61520.3 photosystem I light harvesting complex gene 3 PSI type III chlorophyll a/b-binding protein (Lhca3*1) The mRNA is cell-to-cell mobile. PSI type III chlorophyll a/b-binding protein;(source:Araport11) Ipc12G0013570 AT4G11120.1 translation elongation factor Ts (EF-Ts), putative 0 translation elongation factor Ts (EF-Ts);(source:Araport11) Ipc12G0013580 AT1G55730.2 cation exchanger 5 member of Low affinity calcium antiporter CAX2 family cation exchanger 5;(source:Araport11) Ipc12G0013590 AT5G48300.1 ADP glucose pyrophosphorylase 1 Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested. The mRNA is cell-to-cell mobile. ADP glucose pyrophosphorylase 1;(source:Araport11) Ipc12G0013600 AT5G14400.2 0 Encodes a brassinosteroid C-22 hydroxylase. cytochrome P450, family 724, subfamily A, polypeptide 1;(source:Araport11) Ipc12G0013610 AT1G06550.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc12G0013620 AT2G38020.1 vacuoleless1 (VCL1) necessary for proper vacuole formation and morphogenesis in Arabidopsis vacuoleless1 (VCL1);(source:Araport11) Ipc12G0013630 AT5G50890.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0013640 AT4G37710.2 0 0 VQ motif-containing protein;(source:Araport11) Ipc12G0013650 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc12G0013660 AT4G18740.3 Rho termination factor 0 Rho termination factor;(source:Araport11) Ipc12G0013670 AT1G06490.2 0 Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding. glucan synthase-like 7;(source:Araport11) Ipc12G0013680 AT2G42960.5 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0013700 AT4G18170.1 WRKY DNA-binding protein 28 Member of WRKY Transcription Factor; Group II-c. Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3. In the ovule, it is expressed in hypodermal somatic cells and appears to play a role in supression of megasporocyte cell fate. WRKY DNA-binding protein 28;(source:Araport11) Ipc12G0013690 AT1G29820.2 Magnesium transporter CorA-like family protein 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc12G0013710 AT2G30933.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc12G0013720 AT1G06520.1 glycerol-3-phosphate acyltransferase 1 sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile. glycerol-3-phosphate acyltransferase 1;(source:Araport11) Ipc12G0013730 AT1G29400.3 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like protein 5;(source:Araport11) Ipc12G0013740 AT3G58850.1 phy rapidly regulated 2 Encodes PHYTOCHROME RAPIDLY REGULATED2 (PAR2), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR1 (At2g42870). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510). phy rapidly regulated 2;(source:Araport11) Ipc12G0013750 AT1G06530.1 Tropomyosin-related Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis. Tropomyosin-like protein;(source:Araport11) Ipc12G0013760 AT4G01100.2 adenine nucleotide transporter 1 Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration. adenine nucleotide transporter 1;(source:Araport11) Ipc12G0013770 AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan endotransglycosylase-related protein (XTR7) xyloglucan endotransglucosylase/hydrolase 15;(source:Araport11) Ipc12G0013780 AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan endotransglycosylase-related protein (XTR7) xyloglucan endotransglucosylase/hydrolase 15;(source:Araport11) Ipc12G0013790 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc12G0013800 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc12G0013810 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc12G0013820 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc12G0013830 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc12G0013840 AT3G58830.1 haloacid dehalogenase (HAD) superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase that localizes to chloroplasts in above ground plant parts and mitochondria in root tips and root hairs and is involved in the synthesis of plastidial Phosphatidylglycerol (PG). This enzyme is responsible for the second step of PG synthesis. Mutants show reduced root growth. haloacid dehalogenase (HAD) superfamily protein;(source:Araport11) Ipc12G0013850 AT2G42850.1 cytochrome P450, family 718 0 cytochrome P450, family 718;(source:Araport11) Ipc12G0013860 AT2G42840.1 protodermal factor 1 Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia. protodermal factor 1;(source:Araport11) Ipc12G0013870 AT3G58790.1 galacturonosyltransferase 15 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 15;(source:Araport11) Ipc12G0013880 AT3G58780.5 0 One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc12G0013890 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0013900 AT3G58770.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0013910 AT2G42810.5 0 Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. It also regulates tetrapyrrole biosynthesis through the accumulation of Mg-ProtoIX and acts as a negative regulator of photosynthesis associated nuclear gene expression during chloroplast biogenesis and development. protein phosphatase 5.2;(source:Araport11) Ipc12G0013920 AT2G42800.1 receptor like protein 29 0 receptor like protein 29;(source:Araport11) Ipc12G0013930 AT3G58750.1 citrate synthase 2 Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. citrate synthase 2;(source:Araport11) Ipc12G0013940 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc12G0013950 AT1G07650.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0013960 AT2G30900.1 TRICHOME BIREFRINGENCE-LIKE 43 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 43;(source:Araport11) Ipc12G0013970 AT5G20400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0013980 AT5G45710.3 0 member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc12G0013990 AT1G06470.4 0 0 Nucleotide/sugar transporter family protein;(source:Araport11) Ipc12G0014000 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc12G0014010 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc12G0014020 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014030 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc12G0014040 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc12G0014050 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014060 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014070 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014080 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014090 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014100 AT1G06410.3 0 Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants. trehalose-phosphatase/synthase 7;(source:Araport11) Ipc12G0014110 AT2G41080.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 pentatricopeptide (PPR) repeat protein;(source:Araport11) Ipc12G0014120 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc12G0014130 AT3G14660.2 0 putative cytochrome P450The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 13;(source:Araport11) Ipc12G0014140 AT5G45750.1 RAB GTPase homolog A1C 0 RAB GTPase homolog A1C;(source:Araport11) Ipc12G0014150 AT2G42760.1 0 0 DUF1685 family protein;(source:Araport11) Ipc12G0014160 AT2G42760.1 0 0 DUF1685 family protein;(source:Araport11) Ipc12G0014170 AT2G42750.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc12G0014180 AT5G45775.2 Ribosomal L5P family protein 0 Ribosomal L5P family protein;(source:Araport11) Ipc12G0014190 AT5G46680.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc12G0014200 AT2G30970.2 aspartate aminotransferase 1 ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1;(source:Araport11) Ipc12G0014210 AT5G12000.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc12G0014220 AT2G30980.1 SHAGGY-related protein kinase dZeta Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. SHAGGY-related protein kinase dZeta;(source:Araport11) Ipc12G0014230 AT2G42710.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc12G0014240 AT2G42670.2 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc12G0014250 AT2G30990.5 0 0 arginine N-methyltransferase, putative (DUF688);(source:Araport11) Ipc12G0014260 AT3G58640.2 Mitogen activated protein kinase kinase kinase-related 0 Mitogen activated protein kinase kinase kinase-like protein;(source:Araport11) Ipc12G0014270 AT2G42620.1 RNI-like superfamily protein The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses. The mRNA is cell-to-cell mobile. RNI-like superfamily protein;(source:Araport11) Ipc12G0014280 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0014290 AT1G62250.2 0 0 orotidine 5-phosphate decarboxylase;(source:Araport11) Ipc12G0014300 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc12G0014310 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0014320 AT3G58630.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc12G0014330 AT1G16470.2 proteasome subunit PAB1 Encodes 20S proteasome subunit PAB1 (PAB1). proteasome subunit PAB1;(source:Araport11) Ipc12G0014340 AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 0 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1;(source:Araport11) Ipc12G0014350 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc12G0014360 AT1G53310.3 phosphoenolpyruvate carboxylase 1 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.Plays an important role in carbon and nitrogen metabolism. phosphoenolpyruvate carboxylase 1;(source:Araport11) Ipc12G0014370 AT1G06330.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0014380 AT2G42590.2 general regulatory factor 9 14-3-3 gene. Binds calcium and displays induced structural changes. general regulatory factor 9;(source:Araport11) Ipc12G0014390 AT4G21470.1 riboflavin kinase/FMN hydrolase Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. The mRNA is cell-to-cell mobile. riboflavin kinase/FMN hydrolase;(source:Araport11) Ipc12G0014400 AT3G58610.3 ketol-acid reductoisomerase 0 ketol-acid reductoisomerase;(source:Araport11) Ipc12G0014410 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0014420 AT1G53270.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc12G0014430 AT2G31130.6 0 0 hypothetical protein;(source:Araport11) Ipc12G0014440 AT2G42570.1 TRICHOME BIREFRINGENCE-LIKE 39 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 39;(source:Araport11) Ipc12G0014450 AT2G42560.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 0 late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11) Ipc12G0014460 AT5G67150.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0014470 AT5G67150.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0014480 AT2G42360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0014490 AT3G58100.1 plasmodesmata callose-binding protein 5 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 5;(source:Araport11) Ipc12G0014500 AT2G42390.1 protein kinase C substrate, heavy chain-related 0 kinase C substrate, heavy chain-like protein;(source:Araport11) Ipc12G0014510 AT2G31060.2 elongation factor family protein 0 elongation factor family protein;(source:Araport11) Ipc12G0014520 AT1G06290.1 acyl-CoA oxidase 3 Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. The mRNA is cell-to-cell mobile. acyl-CoA oxidase 3;(source:Araport11) Ipc12G0014530 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014540 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014550 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014560 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014570 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014580 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014590 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc12G0014600 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014610 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc12G0014620 AT2G20520.1 FASCICLIN-like arabinogalactan 6 fasciclin-like arabinogalactan-protein 6 (Fla6) FASCICLIN-like arabinogalactan 6;(source:Araport11) Ipc12G0014630 AT1G28480.1 Thioredoxin superfamily protein Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk. It has also been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc12G0014640 AT5G44150.1 0 0 phosphorelay protein;(source:Araport11) Ipc12G0014650 AT2G07760.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0014660 AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc12G0014670 AT5G44170.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0014680 AT4G28500.1 NAC domain containing protein 73 0 NAC domain containing protein 73;(source:Araport11) Ipc12G0014690 AT5G44180.3 0 0 Homeodomain-like transcriptional regulator;(source:Araport11) Ipc12G0014700 AT2G20570.1 GBF's pro-rich region-interacting factor 1 Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus. GBFs pro-rich region-interacting factor 1;(source:Araport11) Ipc12G0014710 AT1G28395.6 0 0 hypothetical protein;(source:Araport11) Ipc12G0014730 AT2G20590.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc12G0014720 AT1G78550.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0014740 AT5G53970.1 Tyrosine transaminase family protein Encodes a cytosolic tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment. AtTAT1 prefers Tyr as an amino donor but can also use Phe, Trp, His, Met, and Leu. The mRNA is cell-to-cell mobile. Tyrosine transaminase family protein;(source:Araport11) Ipc12G0014750 AT2G40490.1 Uroporphyrinogen decarboxylase 0 Uroporphyrinogen decarboxylase;(source:Araport11) Ipc12G0014760 AT5G36160.1 Tyrosine transaminase family protein Encodes a cytosolic L-tyrosine aminotransferase. AtTAT2 exhibits much broader amino donor specificity than AtTAT1 and can use not only Tyr but also Phe, Trp, His, Met, Leu, Ala, Ser, Cys, Asp, Asn, Gln, and Arg as amino donors. Tyrosine transaminase family protein;(source:Araport11) Ipc12G0014770 AT5G44210.1 erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9;(source:Araport11) Ipc12G0014780 AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180). Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc12G0014790 AT4G28400.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc12G0014800 AT4G21790.1 tobamovirus multiplication 1 encodes a host factor that is required for TMV virus multiplication. The mRNA is cell-to-cell mobile. tobamovirus multiplication 1;(source:Araport11) Ipc12G0014810 AT5G44280.3 0 Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression. RING 1A;(source:Araport11) Ipc12G0014820 AT1G53160.2 squamosa promoter binding protein-like 4 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. squamosa promoter binding protein-like 4;(source:Araport11) Ipc12G0014830 AT1G03750.1 switch 2 0 switch 2;(source:Araport11) Ipc12G0014840 AT1G06530.1 Tropomyosin-related Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis. Tropomyosin-like protein;(source:Araport11) Ipc12G0014850 AT4G32480.1 Protein of unknown function (DUF506) 0 sugar phosphate exchanger, putative (DUF506);(source:Araport11) Ipc12G0014860 AT1G53050.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0014870 AT5G43570.2 0 Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc12G0014880 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc12G0014890 AT1G11710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0014900 AT2G20680.1 Glycosyl hydrolase superfamily protein Encodes a mannanase belonging to clade 1 of the GH5 7 phylogenetic tree that exhibits high substrate affinity and catalytic efficiency on mannan substrates with main chains containing both glucose and mannose units such as konjac glucomannan and spruce galactoglucomannan. It is likely a glycoprotein. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc12G0014910 AT4G03600.1 0 0 pyrroline-5-carboxylate reductase;(source:Araport11) Ipc12G0014920 AT3G15355.1 ubiquitin-conjugating enzyme 25 0 ubiquitin-conjugating enzyme 25;(source:Araport11) Ipc12G0014930 AT4G03560.1 two-pore channel 1 Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress. two-pore channel 1;(source:Araport11) Ipc12G0014940 AT4G28300.1 Protein of unknown function (DUF1421) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall. The mRNA is cell-to-cell mobile. formin-like protein (DUF1421);(source:Araport11) Ipc12G0014950 AT1G03700.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc12G0014960 AT4G21710.1 DNA-directed RNA polymerase family protein Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. DNA-directed RNA polymerase family protein;(source:Araport11) Ipc12G0014970 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0014980 AT5G42110.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0014990 AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 2 0 LORELEI-LIKE-GPI ANCHORED PROTEIN 2;(source:Araport11) Ipc12G0015000 AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 3 0 LORELEI-LIKE-GPI ANCHORED PROTEIN 3;(source:Araport11) Ipc12G0015010 AT4G28280.2 LORELEI-LIKE-GPI ANCHORED PROTEIN 3 0 LORELEI-LIKE-GPI ANCHORED PROTEIN 3;(source:Araport11) Ipc12G0015020 AT1G03687.1 DTW domain-containing protein 0 DTW domain-containing protein;(source:Araport11) Ipc12G0015030 AT4G03520.1 Thioredoxin superfamily protein Encodes a redox activated co-chaperone, chloroplast localized thioredoxin, similar to prokaryotic types. Thioredoxin superfamily protein;(source:Araport11) Ipc12G0015040 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc12G0015050 AT4G28260.2 0 0 acyl-UDP-N-acetylglucosamine O-acyltransferase;(source:Araport11) Ipc12G0015060 AT1G03670.1 ankyrin repeat family protein Ankyrin repeat containing protein ankyrin repeat family protein;(source:Araport11) Ipc12G0015070 AT1G03650.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc12G0015080 AT2G20740.1 Tetraspanin family protein 0 Tetraspanin family protein;(source:Araport11) Ipc12G0015090 AT4G28250.1 expansin B3 putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin B3;(source:Araport11) Ipc12G0015100 AT2G20760.1 Clathrin light chain protein 0 Clathrin light chain protein;(source:Araport11) Ipc12G0015110 AT4G03430.3 0 Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes. pre-mRNA splicing factor-like protein;(source:Araport11) Ipc12G0015120 AT5G54190.1 protochlorophyllide oxidoreductase A light-dependent NADPH:protochlorophyllide oxidoreductase A protochlorophyllide oxidoreductase A;(source:Araport11) Ipc12G0015130 AT4G28140.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0015140 AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Encodes NHL6 (NDR1/HIN1-like 6). Plays an important role in the abiotic stresses-induced ABA signaling and biosynthesis, particularly during seed germination and early seedling development. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0015150 #N/A #N/A #N/A #N/A Ipc12G0015160 AT2G20875.1 epidermal patterning factor 1 Encodes a secretory peptide EPF1 involved in stomatal development. EPF1 is related to EPF2 which controls asymmetric cell divisions during stomatal devlopment. Its transcript levels change after inducing MUTE expression in a mute background. epidermal patterning factor 1;(source:Araport11) Ipc12G0015170 AT1G03620.9 0 0 ELMO/CED-12 family protein;(source:Araport11) Ipc12G0015180 AT4G03420.1 Protein of unknown function (DUF789) 0 hypothetical protein (DUF789);(source:Araport11) Ipc12G0015190 AT4G03415.3 0 Encodes a myristoylated 2C-type protein phosphatase that interacts with AGB1 and is localized to the plasma membrane. Protein phosphatase 2C family protein;(source:Araport11) Ipc12G0015200 AT2G20870.1 cell wall protein precursor, putative 0 cell wall protein precursor;(source:Araport11) Ipc12G0015210 AT4G03400.2 0 Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation. Auxin-responsive GH3 family protein;(source:Araport11) Ipc12G0015220 AT5G40830.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0015230 AT3G27230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0015240 AT1G16250.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0015250 AT1G11120.2 0 0 CTTNBP 2 amino-terminal-like protein;(source:Araport11) Ipc12G0015260 AT1G11125.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0015270 AT2G20860.3 0 LIP1,Lipoic acid synthase, lipoic acid synthase 1;(source:Araport11) Ipc12G0015280 AT3G13670.1 Protein kinase family protein MUT9-like protein kinase. Contributes to phosphorylation of photoexcited CRY2. Interaction with CRY2 occurs via the non catalytic PPKC domain.MLK4 phosphorylates the conserved H2A serine 95 residue. Synthetic mutants that cannot phosphorylate H2AS95 fail to complement the late flowering phenotype suggesting that MLK4 promotes long day flowering via phosphorylation.MLK4 is required for H2A295 phosphorylation of GI. Protein kinase family protein;(source:Araport11) Ipc12G0015290 AT4G03390.2 0 0 STRUBBELIG-receptor family 3;(source:Araport11) Ipc12G0015300 AT1G61250.1 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc12G0015310 AT4G03340.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc12G0015320 AT2G20820.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0015330 AT1G61290.2 0 member of SYP12 Gene Family syntaxin of plants 124;(source:Araport11) Ipc12G0015340 AT2G20815.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc12G0015350 AT4G38360.2 Protein of unknown function (DUF300) LAZ1 is a DUF300 domain protein that appears to function in vacuolar transport effecting brassinosteroid and programmed cell dealth signaling pathways. organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc12G0015360 AT3G59240.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc12G0015370 AT2G27460.1 sec23/sec24 transport family protein Sec23 homolog , forms a distinct clade with SEC23A.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation. sec23/sec24 transport family protein;(source:Araport11) Ipc12G0015380 AT4G28210.1 embryo defective 1923 0 embryo defective 1923;(source:Araport11) Ipc12G0015390 AT2G20800.1 NAD(P)H dehydrogenase B4 0 NAD(P)H dehydrogenase B4;(source:Araport11) Ipc12G0015400 AT2G20900.3 diacylglycerol kinase 5 0 diacylglycerol kinase 5;(source:Araport11) Ipc12G0015410 AT2G20890.1 photosystem II reaction center PSB29 protein Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membrane–delimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex. The mRNA is cell-to-cell mobile. photosystem II reaction center PSB29 protein;(source:Araport11) Ipc12G0015420 AT4G21450.1 PapD-like superfamily protein 0 PapD-like superfamily protein;(source:Araport11) Ipc12G0015430 AT4G28240.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Positively regulates plant resistance against Pst DC3000 by enhancing PTI responses. Wound-responsive family protein;(source:Araport11) Ipc12G0015440 AT4G21440.1 MYB-like 102 Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family. MYB-like 102;(source:Araport11) Ipc12G0015450 AT4G28100.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0015460 AT4G05120.2 0 Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine. Major facilitator superfamily protein;(source:Araport11) Ipc12G0015470 AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes an aromatic aldehyde synthase (AtAAS), which catalyzes the in vitro conversion of phenylalanine and 3,4-dihydroxy-L-phenylalanine to phenylacetaldehyde and dopaldehyde, respectively. The mRNA is cell-to-cell mobile. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc12G0015480 AT4G03270.1 Cyclin D6;1 Cyclin D6, involved in cortex/endodermis asymmetric stem cell division. Cyclin D6;(source:Araport11) Ipc12G0015490 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc12G0015500 AT5G04670.2 0 Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing. Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc12G0015510 AT4G03240.1 frataxin homolog Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress. frataxin-like protein;(source:Araport11) Ipc12G0015520 AT4G27310.1 B-box type zinc finger family protein Encodes a B-box domain protein that negatively regulates photomorphogenic development by interfering with the binding of the transcription factor HY5 to target gene promoters. Degradation of BBX28 in darkness is dependent on COP1 and occurs via the 26S proteasome pathway. BBX28 acts as a key factor in the COP1-HY5 regulatory hub by maintaining proper HY5 activity to ensure normal photomorphogenic development in plants. B-box type zinc finger family protein;(source:Araport11) Ipc12G0015530 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc12G0015540 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc12G0015550 AT5G54490.1 pinoid-binding protein 1 Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. pinoid-binding protein 1;(source:Araport11) Ipc12G0015560 AT4G03220.1 Protein with RNI-like/FBD-like domains 0 Protein with RNI-like/FBD-like domain;(source:Araport11) Ipc12G0015570 AT3G12770.1 mitochondrial editing factor 22 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 22;(source:Araport11) Ipc12G0015580 AT3G50950.2 HOPZ-ACTIVATED RESISTANCE 1 Encodes a canonical CC-type NLR protein that is required for the recognition of the T3SE HopZ1a from the pathogenic bacteria P. syringae. HOPZ-ACTIVATED RESISTANCE 1;(source:Araport11) Ipc12G0015590 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0015600 AT4G03210.1 xyloglucan endotransglucosylase/hydrolase 9 encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers. xyloglucan endotransglucosylase/hydrolase 9;(source:Araport11) Ipc12G0015610 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc12G0015620 #N/A #N/A #N/A #N/A Ipc12G0015630 AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator 0 DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc12G0015640 AT5G54650.2 formin homology5 Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene. formin homology5;(source:Araport11) Ipc12G0015650 AT5G07760.1 formin homology 2 domain-containing protein / FH2 domain-containing protein 0 formin homology 2 domain-containing protein / FH2 domain-containing protein;(source:Araport11) Ipc12G0015660 AT1G14710.2 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0015670 AT4G15210.1 beta-amylase 5 cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. beta-amylase 5;(source:Araport11) Ipc12G0015680 AT3G22070.1 proline-rich family protein 0 proline-rich family protein;(source:Araport11) Ipc12G0015690 AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0015700 AT2G32300.1 uclacyanin 1 Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. uclacyanin 1;(source:Araport11) Ipc12G0015710 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc12G0015720 AT3G01670.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion protein;(source:Araport11) Ipc12G0015730 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc12G0015740 AT1G05280.1 Protein of unknown function (DUF604) 0 ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604);(source:Araport11) Ipc12G0015750 AT3G21880.1 B-box type zinc finger protein with CCT domain Encodes a substrate of the COP1/SPA E3 ubiquitin ligase. It is degraded in darkness and stabilized by white, red and blue light. Overexpression results in decreased apical dominance, increased branching and delayed flowering in long days. The latter phenotype is due to reduced levels of FT and dependent on the presence of CO (PMID:29187570). B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc12G0015760 AT3G21870.1 cyclin p2;1 0 cyclin p2;(source:Araport11) Ipc12G0015770 AT3G21865.1 peroxin 22 Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. peroxin 22;(source:Araport11) Ipc12G0015780 AT1G71460.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc12G0015790 AT3G21820.1 histone-lysine N-methyltransferase ATXR2 0 histone-lysine N-methyltransferase ATXR2;(source:Araport11) Ipc12G0015800 AT1G05260.1 Peroxidase superfamily protein Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc12G0015810 AT2G46410.1 Homeodomain-like superfamily protein Nuclear-localized R3-type MYB transcription factor. Positive regulator of hair-cell differentiation. Preferentially transcribed in hairless cells. Moves from atrichoblasts into trichoblast via plasmodesmata in a tissue-specific mode. N-terminus and part of the Myb domain are required for this movement, with W76 playing a crucial role. Capability to increase the size-exclusion limit of plasmodesmata. Regulated by WEREWOLF. Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0015820 AT3G21720.1 isocitrate lyase Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL). isocitrate lyase;(source:Araport11) Ipc12G0015830 AT3G03800.2 0 member of SYP13 Gene Family syntaxin of plants 131;(source:Araport11) Ipc12G0015840 AT3G05975.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0015850 AT3G21710.2 0 0 transmembrane protein;(source:Araport11) Ipc12G0015860 AT4G04890.2 0 Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 2;(source:Araport11) Ipc12G0015870 AT1G61800.1 glucose-6-phosphate/phosphate translocator 2 glucose6-Phosphate/phosphate transporter 2. Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile. glucose-6-phosphate/phosphate translocator 2;(source:Araport11) Ipc12G0015880 AT2G32380.1 Transmembrane protein 97, predicted 0 Transmembrane protein 97, Putative;(source:Araport11) Ipc12G0015890 AT3G21700.3 Ras-related small GTP-binding family protein Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip. Ras-related small GTP-binding family protein;(source:Araport11) Ipc12G0015900 AT2G32400.1 glutamate receptor 5 Glr5 glutamate receptor 5;(source:Araport11) Ipc12G0015910 AT1G20696.1 high mobility group B3 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B3;(source:Araport11) Ipc12G0015920 AT3G21690.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc12G0015930 AT1G61900.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0015940 AT3G21680.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0015950 AT2G05710.1 aconitase 3 Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. aconitase 3;(source:Araport11) Ipc12G0015960 AT1G05180.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves. Promotes degradation of the cytokinin response repressor ARR5. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0015970 AT2G32415.3 0 0 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11) Ipc12G0015980 AT1G05170.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc12G0015990 AT2G32460.1 myb domain protein 101 Member of the R2R3 factor gene family. myb domain protein 101;(source:Araport11) Ipc12G0016000 AT2G32480.1 ARABIDOPSIS SERIN PROTEASE Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts. chloroplastic membrane metallo proteases;(source:Araport11) Ipc12G0016010 AT1G76160.1 SKU5 similar 5 0 SKU5 similar 5;(source:Araport11) Ipc12G0016020 AT5G42570.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc12G0016030 AT1G62280.1 SLAC1 homologue 1 Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane. SLAC1 homologue 1;(source:Araport11) Ipc12G0016040 AT5G55090.1 mitogen-activated protein kinase kinase kinase 15 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15;(source:Araport11) Ipc12G0016050 AT1G11910.1 aspartic proteinase A1 Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). aspartic proteinase A1;(source:Araport11) Ipc12G0016060 AT1G62300.1 WRKY family transcription factor Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress. WRKY family transcription factor;(source:Araport11) Ipc12G0016070 AT2G32540.1 cellulose synthase-like B4 encodes a gene similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase-like B4;(source:Araport11) Ipc12G0016080 AT2G32530.1 cellulose synthase-like B3 encodes a gene similar to cellulose synthase cellulose synthase-like B3;(source:Araport11) Ipc12G0016090 AT2G32620.1 cellulose synthase-like B encodes a gene similar to cellulose synthase cellulose synthase-like B;(source:Araport11) Ipc12G0016100 AT4G15440.1 hydroperoxide lyase 1 Encodes a hydroperoxide lyase. Also a member of the CYP74B cytochrome p450 family. In the ecotype Columbia (Col) the gene contains a 10-nucleotide deletion in its first exon that causes it to code for a truncated protein that results in a non-functional hydroperoxide lyase. hydroperoxide lyase 1;(source:Araport11) Ipc12G0016110 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0016120 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0016130 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc12G0016140 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0016150 AT3G21620.1 ERD (early-responsive to dehydration stress) family protein 0 ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc12G0016160 AT4G15420.1 Ubiquitin fusion degradation UFD1 family protein 0 Ubiquitin fusion degradation UFD1 family protein;(source:Araport11) Ipc12G0016170 AT3G21630.1 chitin elicitor receptor kinase 1 LysM receptor-like kinase, based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity. Involved in the perception and transduction of the chitin oligosaccharide elicitor. Located in the plasma membrane. CERK1 phosphorylates LIK1, a LLR-RLK that is involved in innate immunity, chitin elicitor receptor kinase 1;(source:Araport11) Ipc12G0016180 AT3G21630.1 chitin elicitor receptor kinase 1 LysM receptor-like kinase, based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity. Involved in the perception and transduction of the chitin oligosaccharide elicitor. Located in the plasma membrane. CERK1 phosphorylates LIK1, a LLR-RLK that is involved in innate immunity, chitin elicitor receptor kinase 1;(source:Araport11) Ipc12G0016190 AT1G05065.1 CLAVATA3/ESR-RELATED 20 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 20;(source:Araport11) Ipc12G0016200 AT2G32640.1 Lycopene beta/epsilon cyclase protein Encodes a lycopene beta cyclase that catalyzes the addition of beta-ionone end groups to the end of lycopene molecules. Lycopene beta/epsilon cyclase protein;(source:Araport11) Ipc12G0016210 AT4G00310.2 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc12G0016220 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc12G0016230 AT3G21670.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc12G0016240 AT1G05030.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc12G0016250 AT2G05760.1 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc12G0016260 AT2G32970.4 0 0 G1/S-specific cyclin-E protein;(source:Araport11) Ipc12G0016270 AT5G55160.1 small ubiquitin-like modifier 2 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. small ubiquitin-like modifier 2;(source:Araport11) Ipc12G0016280 AT2G05790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc12G0016290 AT1G05020.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc12G0016300 AT4G26790.2 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc12G0016310 AT1G04980.1 PDI-like 2-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. PDI-like 2-2;(source:Araport11) Ipc12G0016320 AT3G09220.1 laccase 7 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 7;(source:Araport11) Ipc12G0016330 AT3G07890.5 0 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc12G0016340 AT5G35700.1 fimbrin-like protein 2 Encodes FIMBRIN5, an actin bundling factor required for pollen germination and pollen tube growth. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. fimbrin-like protein 2;(source:Araport11) Ipc12G0016350 AT2G04780.2 FASCICLIN-like arabinoogalactan 7 fasciclin-like arabinogalactan-protein 7 (Fla7) FASCICLIN-like arabinoogalactan 7;(source:Araport11) Ipc12G0016360 AT5G47530.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc12G0016370 AT2G04850.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc12G0016380 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0016390 AT5G55560.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0016400 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc12G0016410 AT3G07760.5 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc12G0016420 AT2G05100.1 photosystem II light harvesting complex gene 2.1 Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1. photosystem II light harvesting complex protein 2.1;(source:Araport11) Ipc12G0016430 AT5G15802.1 0 0 chaperone;(source:Araport11) Ipc12G0016440 AT4G16447.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0016450 AT3G01980.4 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0016460 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc12G0016470 AT2G36070.1 translocase inner membrane subunit 44-2 One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP. translocase inner membrane subunit 44-2;(source:Araport11) Ipc12G0016480 AT5G48160.2 Protein of unknown function (DUF1423) Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems. potyvirus VPg interacting protein (DUF1423);(source:Araport11) Ipc12G0016490 AT5G35750.1 histidine kinase 2 Encodes histidine kinase AHK2. histidine kinase 2;(source:Araport11) Ipc12G0016500 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc12G0016510 AT2G17410.3 0 AT Rich domain protein. ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc12G0016520 AT5G48170.1 F-box family protein encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism. F-box family protein;(source:Araport11) Ipc12G0016530 AT4G16420.1 homolog of yeast ADA2 2B Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations. ADA2 2B;(source:Araport11) Ipc12G0016540 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc12G0016550 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc12G0016560 AT3G13130.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0016570 AT5G28530.3 0 0 FAR1-related sequence 10;(source:Araport11) Ipc12G0016580 AT2G05320.1 beta-1,2-N-acetylglucosaminyltransferase II 0 beta-1,2-N-acetylglucosaminyltransferase II;(source:Araport11) Ipc12G0016590 AT4G16360.1 5'-AMP-activated protein kinase beta-2 subunit protein Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. SNF1-related protein kinase regulatory subunit beta-2;(source:Araport11) Ipc12G0016600 AT5G35870.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0016610 AT4G14540.1 nuclear factor Y, subunit B3 0 nuclear factor Y, subunit B3;(source:Araport11) Ipc12G0016620 AT4G12730.1 FASCICLIN-like arabinogalactan 2 AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds FASCICLIN-like arabinogalactan 2;(source:Araport11) Ipc12G0016630 AT3G07720.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0016640 AT4G25434.10 0 0 nudix hydrolase homolog 10;(source:Araport11) Ipc12G0016650 AT1G48100.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0016660 AT5G48230.2 acetoacetyl-CoA thiolase 2 Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal. acetoacetyl-CoA thiolase 2;(source:Araport11) Ipc12G0016670 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc12G0016680 AT1G64990.2 GPCR-type G protein 1 Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG1 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG1 and may act to down-regulate GTG1 binding to ABA. GTG1 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG1 transcript levels do not appear to change in response to ABA or abiotic stresses. GPCR-type G protein 1;(source:Araport11) Ipc12G0016690 AT4G25330.1 0 0 SAWADEE protein;(source:Araport11) Ipc12G0016700 AT3G07670.1 Rubisco methyltransferase family protein 0 Rubisco methyltransferase family protein;(source:Araport11) Ipc12G0016710 AT2G04350.2 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc12G0016720 AT5G53070.1 Ribosomal protein L9/RNase H1 0 Ribosomal protein L9/RNase H1;(source:Araport11) Ipc12G0016730 AT3G07660.1 Kinase-related protein of unknown function (DUF1296) 0 flocculation protein (DUF1296);(source:Araport11) Ipc12G0016740 AT4G12710.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0016750 AT2G04240.2 RING/U-box superfamily protein Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism. RING/U-box superfamily protein;(source:Araport11) Ipc12G0016760 AT5G48250.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc12G0016770 AT2G04235.4 0 0 hypothetical protein;(source:Araport11) Ipc12G0016780 AT3G07640.1 0 0 period circadian protein;(source:Araport11) Ipc12G0016790 AT4G26550.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc12G0016800 AT3G59080.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0016810 AT5G01930.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc12G0016820 AT1G56150.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc12G0016830 AT2G43000.1 NAC domain containing protein 42 Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2). Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses. NAC domain containing protein 42;(source:Araport11) Ipc12G0016840 AT1G14600.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0016850 AT5G45110.1 NPR1-like protein 3 Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid. The mRNA is cell-to-cell mobile. NPR1-like protein 3;(source:Araport11) Ipc12G0016860 AT2G30800.1 helicase in vascular tissue and tapetum Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family. helicase in vascular tissue and tapetum;(source:Araport11) Ipc12G0016870 AT5G08560.3 0 WRDR26 is a WD-40 repeat containing protein initially identified as an interacting partner RanBPM. Its expression is induced by abiotic stress as well as various plant growth regulators including IAA, ABA and ethylene. Role as a novel modulator of redox homeostatis, responding to developmental and stress signals to regulate leaf senescence. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc12G0016880 AT3G10260.2 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc12G0016890 AT4G14965.1 membrane-associated progesterone binding protein 4 0 membrane-associated progesterone binding protein 4;(source:Araport11) Ipc12G0016900 AT4G20330.1 Transcription initiation factor TFIIE, beta subunit 0 Transcription initiation factor TFIIE, beta subunit;(source:Araport11) Ipc12G0016910 AT2G32500.2 0 0 Stress responsive alpha-beta barrel domain protein;(source:Araport11) Ipc12G0016920 AT3G02960.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0016930 AT1G23000.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0016940 AT1G30540.1 Actin-like ATPase superfamily protein 0 Actin-like ATPase superfamily protein;(source:Araport11) Ipc12G0016950 AT3G59040.1 Tetratricopeptide repeat (TPR)-like superfamily protein Involved in chloroplast biogenesis and function. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0016960 AT2G43020.1 polyamine oxidase 2 Encodes a polyamine oxidase. polyamine oxidase 2;(source:Araport11) Ipc12G0016970 AT1G06690.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc12G0016980 AT4G16660.1 heat shock protein 70 (Hsp 70) family protein 0 heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc12G0016990 AT3G22270.1 Topoisomerase II-associated protein PAT1 0 Topoisomerase II-associated protein PAT1;(source:Araport11) Ipc12G0017000 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0017010 AT2G32210.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc12G0017020 AT2G32240.1 0 PAMP induced protein involved in defense response. Interaction with UBAC2 proteins in the ER, is necessary for PAMP mediated accumulation of the callose synthase PMR4. early endosome antigen;(source:Araport11) Ipc12G0017030 AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc12G0017040 AT4G15080.2 0 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc12G0017050 AT3G22170.2 far-red elongated hypocotyls 3 A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. far-red elongated hypocotyls 3;(source:Araport11) Ipc12G0017060 AT2G32250.6 0 0 FAR1-related sequence 2;(source:Araport11) Ipc12G0017070 AT4G39720.4 0 0 VQ motif-containing protein;(source:Araport11) Ipc12G0017080 AT1G05310.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0017090 AT2G32260.1 phosphorylcholine cytidylyltransferase 0 phosphorylcholine cytidylyltransferase;(source:Araport11) Ipc12G0017100 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0017110 AT1G07250.1 UDP-glucosyl transferase 71C4 0 UDP-glucosyl transferase 71C4;(source:Araport11) Ipc12G0017120 AT3G21790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0017130 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0017140 AT1G65270.3 0 0 ER membrane protein complex subunit-like protein;(source:Araport11) Ipc12G0017150 AT3G03330.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0017160 AT1G64880.1 Ribosomal protein S5 family protein 0 Ribosomal protein S5 family protein;(source:Araport11) Ipc12G0017170 AT5G16260.1 RNA binding (RRM/RBD/RNP motifs) family protein Encodes a RNA binding protein ELF9 (EARLY FLOWERING9). Loss of ELF9 function in the Wassilewskija ecotype causes early flowering in short days. ELF9 reduces SOC1 (SUPPRESSOR OF OVEREXPRESSION OF CO1) transcript levels, possibly via nonsense-mediated mRNA decay. The mRNA is cell-to-cell mobile. RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0017180 AT5G36800.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0017190 AT1G65470.1 chromatin assembly factor-1 (FASCIATA1) (FAS1) Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. chromatin assembly factor-1 (FASCIATA1) (FAS1);(source:Araport11) Ipc12G0017200 AT1G65480.2 0 FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). Together with TSF, it plays an antagonistic role to TFL1 in the determination of inflorescence meristem identity. FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc12G0017210 AT1G65480.2 0 FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). Together with TSF, it plays an antagonistic role to TFL1 in the determination of inflorescence meristem identity. FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc12G0017220 AT1G65450.1 HXXXD-type acyl-transferase family protein Contains dual transcription units and alternative splicing that could rescue the sterility defect of glc mutants. Shares homology to BAHD (for BEAT, AHCT, HCBT, and DAT) acyl-transferases. Functions in double fertilization. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0017230 AT5G36790.3 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc12G0017240 AT2G43240.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc12G0017250 AT3G03305.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc12G0017260 AT1G51190.1 Integrase-type DNA-binding superfamily protein Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0017270 AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein 0 ACT domain-containing small subunit of acetolactate synthase protein;(source:Araport11) Ipc12G0017280 AT4G01570.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0017290 AT5G17410.1 Spc97 / Spc98 family of spindle pole body (SBP) component 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc12G0017300 AT1G65290.1 mitochondrial acyl carrier protein 2 Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. The mRNA is cell-to-cell mobile. mitochondrial acyl carrier protein 2;(source:Araport11) Ipc12G0017310 AT5G36950.1 DegP protease 10 Encodes a putative DegP protease. DegP protease 10;(source:Araport11) Ipc12G0017320 AT5G16390.1 chloroplastic acetylcoenzyme A carboxylase 1 Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex. chloroplastic acetylcoenzyme A carboxylase 1;(source:Araport11) Ipc12G0017330 AT3G02830.1 zinc finger protein 1 Encodes a zinc finger protein that binds to PORA mRNA in vivo and recruits the Pfr form of phytochrome to the 5′-UTR of PORA mRNA to regulate translation of the mRNA. zinc finger protein 1;(source:Araport11) Ipc12G0017340 #N/A #N/A #N/A #N/A Ipc12G0017350 AT1G65295.1 0 0 ubiquitin carboxyl-terminal hydrolase;(source:Araport11) Ipc12G0017360 AT4G12840.2 Protein of unknown function (DUF707) 0 GTPase Der (DUF707);(source:Araport11) Ipc12G0017370 AT3G02800.1 Tyrosine phosphatase family protein Encodes an atypical dual-specificity phosphatase. Tyrosine phosphatase family protein;(source:Araport11) Ipc12G0017380 AT2G47520.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. It plays a role in hypoxia-induced root slanting. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0017390 AT3G02790.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc12G0017400 AT5G56270.1 WRKY DNA-binding protein 2 Encodes WRKY transcription factor 2, a zinc-finger protein. In wrky2 mutants, egg cells polarize normally but zygotes fail to reestablish polar organelle positioning from a transient symmetric state, resulting in equal cell division and distorted embryo development. WRKY DNA-binding protein 2;(source:Araport11) Ipc12G0017410 AT5G16460.1 Putative adipose-regulatory protein (Seipin) Membrane protein involved in lipid droplet biogenesis primarily in embryos. Putative adipose-regulatory protein (Seipin);(source:Araport11) Ipc12G0017420 AT5G16440.1 isopentenyl diphosphate isomerase 1 Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. isopentenyl diphosphate isomerase 1;(source:Araport11) Ipc12G0017430 AT5G36230.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0017440 AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0017450 AT3G02750.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc12G0017460 AT1G65230.1 Uncharacterized conserved protein (DUF2358) 0 transmembrane protein, putative (DUF2358);(source:Araport11) Ipc12G0017470 AT3G02740.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0017480 AT1G79610.1 Na+/H+ antiporter 6 Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity. Na+/H+ antiporter 6;(source:Araport11) Ipc12G0017490 AT1G65320.1 Cystathionine beta-synthase (CBS) family protein 0 Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc12G0017500 AT1G65380.1 Leucine-rich repeat (LRR) family protein Receptor-like protein containing leucine-rich repeats. Regulates both meristem and organ development in Arabidopsis. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc12G0017510 AT1G79790.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Encodes a chloroplast-localized FMN hydrolase that whose phosphatase activity is FMN-specific. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc12G0017520 AT3G10770.2 Single-stranded nucleic acid binding R3H protein 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc12G0017530 AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0017540 AT5G12340.2 0 0 DUF4228 domain protein;(source:Araport11) Ipc12G0017550 AT1G21720.1 proteasome beta subunit C1 20S proteasome beta subunit PBC1 truncated protein (PBC1) proteasome beta subunit C1;(source:Araport11) Ipc12G0017560 AT1G65090.1 0 0 nucleolin;(source:Araport11) Ipc12G0017580 AT5G16510.2 Alpha-1,4-glucan-protein synthase family protein RGP5 is a member of the reversably-glycosylated family of proteins. Analyses using tagged RGP5 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP5 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP5 can form complexes with RGP1 and RGP2. Alpha-1,4-glucan-protein synthase family protein;(source:Araport11) Ipc12G0017590 AT3G07020.1 UDP-Glycosyltransferase superfamily protein encodes a 3beta-hydroxy sterol UDP-glucosyltransferase. ugt80a2 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels and reduced seed size. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0017570 AT5G16510.2 Alpha-1,4-glucan-protein synthase family protein RGP5 is a member of the reversably-glycosylated family of proteins. Analyses using tagged RGP5 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP5 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP5 can form complexes with RGP1 and RGP2. Alpha-1,4-glucan-protein synthase family protein;(source:Araport11) Ipc12G0017600 AT3G07070.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0017610 AT2G02240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc12G0017620 AT1G08530.1 0 0 chitinase-like protein;(source:Araport11) Ipc12G0017630 AT2G38430.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0017640 AT3G07360.1 plant U-box 9 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 9;(source:Araport11) Ipc12G0017650 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc12G0017660 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc12G0017670 AT1G64790.1 ILITYHIA ILITHYIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color. Required for bacterium-triggered stomatal closure. ILITYHIA;(source:Araport11) Ipc12G0017680 AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal 0 DNA-directed RNA polymerase, subunit M, archaeal;(source:Araport11) Ipc12G0017690 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc12G0017700 AT5G37360.1 0 0 LOW protein: ammonium transporter 1-like protein;(source:Araport11) Ipc12G0017710 AT1G64780.1 ammonium transporter 1;2 encodes an ammonium transporter protein believed to act as a high affinity transporter. It is expressed in the root, primarily in endodermal and cortical cells, and contributes to ammonium uptake in the root. ammonium transporter 1;(source:Araport11) Ipc12G0017720 AT3G04310.2 0 0 transmembrane protein;(source:Araport11) Ipc12G0017730 AT3G09570.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc12G0017740 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc12G0017750 AT5G53530.1 vacuolar protein sorting 26A Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. vacuolar protein sorting 26A;(source:Araport11) Ipc12G0017760 AT1G08590.1 Leucine-rich receptor-like protein kinase family protein Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0017770 AT3G04350.1 Plant protein of unknown function (DUF946) 0 vacuolar sorting-associated protein (DUF946);(source:Araport11) Ipc12G0017780 AT1G04540.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc12G0017790 AT5G44070.1 phytochelatin synthase 1 (PCS1) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+. The mRNA is cell-to-cell mobile. phytochelatin synthase 1 (PCS1);(source:Araport11) Ipc12G0017800 AT4G35300.9 0 0 tonoplast monosaccharide transporter2;(source:Araport11) Ipc12G0017810 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0017820 AT1G04540.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc12G0017830 AT3G04380.2 SET-domain containing protein lysine methyltransferase family protein Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc12G0017840 AT4G28610.1 phosphate starvation response 1 Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphate starvation response 1;(source:Araport11) Ipc12G0017850 AT3G52290.1 IQ-domain 3 0 IQ-domain 3;(source:Araport11) Ipc12G0017860 AT1G07900.1 LOB domain-containing protein 1 0 LOB domain-containing protein 1;(source:Araport11) Ipc12G0017870 AT2G16880.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0017880 AT2G37070.1 0 Encodes a microtubule-associated protein track growing microtubule plus ends. TRIO/F-actin-binding protein;(source:Araport11) Ipc12G0017890 AT3G54770.3 0 Encodes a putative RNA binding protein that is localized in the nucleus and affects ABA-regulated seed germination of Arabidopsis. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0017900 AT1G64870.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0017910 AT5G19690.2 0 encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditionsThe mRNA is cell-to-cell mobile. staurosporin and temperature sensitive 3-like A;(source:Araport11) Ipc12G0017920 AT3G12360.1 Ankyrin repeat family protein Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein;(source:Araport11) Ipc12G0017930 AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc12G0017940 AT5G13520.1 peptidase M1 family protein 0 peptidase M1 family protein;(source:Araport11) Ipc12G0017950 AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE) encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities. histidine biosynthesis bifunctional protein (HISIE);(source:Araport11) Ipc12G0017960 AT3G55020.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc12G0017970 AT2G39290.1 phosphatidylglycerolphosphate synthase 1 Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria. phosphatidylglycerolphosphate synthase 1;(source:Araport11) Ipc12G0017980 AT4G03490.3 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc12G0017990 AT2G37170.2 0 a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev plasma membrane intrinsic protein 2;(source:Araport11) Ipc12G0018000 AT1G50500.4 0 encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress. Membrane trafficking VPS53 family protein;(source:Araport11) Ipc12G0018010 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc12G0018020 AT5G49015.3 0 0 Expressed protein;(source:Araport11) Ipc12G0018030 AT5G19290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0018040 AT3G01390.4 0 Subunit G of the vacuolar membrane ATPAse complex vacuolar membrane ATPase 10;(source:Araport11) Ipc12G0018050 AT5G19500.1 Tryptophan/tyrosine permease Encodes a putative amino acid transporter that localizes to the chloroplast inner envelope membrane. Tryptophan/tyrosine permease;(source:Araport11) Ipc12G0018060 AT3G54950.1 patatin-like protein 6 Encodes pPLAIIIbeta, a member of the Group 3 patatin-related phospholipases. pPLAIIIbeta hydrolyzes phospholipids and galactolipids and additionally has acyl-CoA thioesterase activity. Alterations of pPLAIIIβ result in changes in lipid levels and composition. patatin-like protein 6;(source:Araport11) Ipc12G0018070 AT1G48850.1 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative 0 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase;(source:Araport11) Ipc12G0018080 AT2G46530.1 auxin response factor 11 0 auxin response factor 11;(source:Araport11) Ipc12G0018090 AT2G28880.1 para-aminobenzoate (PABA) synthase family protein ADCS encodes a protein that has two functional domains. The N-terminal domain has glutamine amidotransferase activity while the C-terminal domain has aminodeoxychorismate synthase (ADCS) activity. These two domains act together to catalyze the transformation of chorismate to 4-amino-4-deoxychorismate. This reaction is required for 4-aminobenzoate (pABA) production and ultimately for folate biosynthesis. The putative target peptide of ADCS can direct GFP to the chloroplast. para-aminobenzoate (PABA) synthase family protein;(source:Araport11) Ipc12G0018100 AT3G54890.1 photosystem I light harvesting complex gene 1 Encodes a component of the light harvesting complex associated with photosystem I. chlorophyll a-b binding protein 6;(source:Araport11) Ipc12G0018110 AT2G39190.2 Protein kinase superfamily protein member of ATH subfamily Protein kinase superfamily protein;(source:Araport11) Ipc12G0018120 AT3G07950.1 rhomboid protein-related 0 rhomboid protein-like protein;(source:Araport11) Ipc12G0018130 AT2G39200.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc12G0018140 AT3G12090.1 tetraspanin6 TET6 encodes a member of the TETRASPANIN gene family that is expressed in the vascular system and is involved in organ growth redundantly with TET5. tetraspanin6;(source:Araport11) Ipc12G0018150 AT2G35770.1 serine carboxypeptidase-like 28 0 serine carboxypeptidase-like 28;(source:Araport11) Ipc12G0018160 AT4G25030.2 0 Plastid localized protein of unknown function. Mutants are more susceptible to P. syringae and produce less callose upon infection. Serine/Threonine-kinase;(source:Araport11) Ipc12G0018170 AT5G50840.1 0 0 alpha-taxilin-like protein;(source:Araport11) Ipc12G0018180 AT3G55510.1 Noc2p family Encodes a regulator of floral determinacy in that interacts with both nucleolar and nucleoplasmic proteins. Noc2p family;(source:Araport11) Ipc12G0018190 AT5G13570.1 decapping 2 Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5’-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1. decapping 2;(source:Araport11) Ipc12G0018200 AT5G17530.3 phosphoglucosamine mutase family protein 0 phosphoglucosamine mutase family protein;(source:Araport11) Ipc12G0018210 AT4G30080.1 auxin response factor 16 Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16;(source:Araport11) Ipc12G0018220 AT1G08010.3 0 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 11;(source:Araport11) Ipc12G0018230 AT1G10000.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0018240 AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11) Ipc12G0018250 AT2G01720.1 Ribophorin I 0 Ribophorin I;(source:Araport11) Ipc12G0018260 AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc12G0018270 AT2G36240.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc12G0018280 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0018290 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc12G0018300 AT3G60750.1 Transketolase 0 Transketolase;(source:Araport11) Ipc12G0018310 AT3G57120.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0018320 AT5G65430.1 general regulatory factor 8 member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 general regulatory factor 8;(source:Araport11) Ipc12G0018330 AT1G32420.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc12G0018340 AT1G53390.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0018350 AT1G11320.1 0 0 GDSL esterase/lipase;(source:Araport11) Ipc12G0018360 AT3G10360.1 pumilio 4 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 4;(source:Araport11) Ipc12G0018370 AT2G39130.2 0 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc12G0018380 AT5G61300.2 0 0 hypothetical protein;(source:Araport11) Ipc12G0018390 AT4G04670.1 Met-10+ like family protein / kelch repeat-containing protein 0 Met-10+ like family protein / kelch repeat-containing protein;(source:Araport11) Ipc12G0018400 AT3G10370.1 FAD-dependent oxidoreductase family protein mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion. FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc12G0018410 AT3G54870.2 0 Armadillo-repeat containing kinesin-related protein. Plays a role during transition to root-hair tip growth.Mutants have short, branched root hairs and an excess of endoplasmic microtubles. Phenotype suggests ARK1 plays a role in modulating microtubule depolymerization during root hair tip growth.An HKT2.4 (CS76404) - ARK1 variant causes root hair branching. Armadillo/beta-catenin repeat family protein / kinesin motor family protein;(source:Araport11) Ipc12G0018420 AT3G10380.1 subunit of exocyst complex 8 Subunit of the Putative Arabidopsis Exocyst Complex subunit of exocyst complex 8;(source:Araport11) Ipc12G0018430 AT3G10390.2 0 Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. protein FLOWERING locus D-like protein;(source:Araport11) Ipc12G0018440 AT1G14205.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc12G0018450 AT2G39170.1 0 0 MEF2BNB-like protein;(source:Araport11) Ipc12G0018460 AT3G10410.1 SERINE CARBOXYPEPTIDASE-LIKE 49 0 SERINE CARBOXYPEPTIDASE-LIKE 49;(source:Araport11) Ipc12G0018470 AT3G54880.1 0 0 zinc finger protein;(source:Araport11) Ipc12G0018480 AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'beta). Functions redundantly with the alpha subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc12G0018490 AT5G04310.3 0 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0018500 AT5G22930.1 Protein of unknown function (DUF1635) 0 enabled-like protein (DUF1635);(source:Araport11) Ipc12G0018510 AT5G21050.1 0 0 hyccin;(source:Araport11) Ipc12G0018520 AT5G51480.1 SKU5 similar 2 GPI anchored protein, highly expressed in reproductive tissues. SKU5 similar 2;(source:Araport11) Ipc12G0018530 AT1G75790.1 SKU5 similar 18 0 SKU5 similar 18;(source:Araport11) Ipc12G0018540 AT5G03530.2 0 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes. RAB GTPase homolog C2A;(source:Araport11) Ipc12G0018550 AT3G10480.2 NAC domain containing protein 50 Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control. It binds the NAC-binding site, the Mitochondrial Dysfunction Motif. NAC domain containing protein 50;(source:Araport11) Ipc12G0018560 AT3G10500.1 NAC domain containing protein 53 Encodes a transcriptional activator that is associated with the plasma membrane in a dormant form and is proteolytically cleaved to create a form that can enter the nucleus. It is thought to promote ROS production by binding directly to the promoters of genes encoding ROS biosynthetic enzymes during drought-induced leaf senescence. The mRNA is cell-to-cell mobile. NAC domain containing protein 53;(source:Araport11) Ipc12G0018570 AT4G30220.1 small nuclear ribonucleoprotein F 0 small nuclear ribonucleoprotein F;(source:Araport11) Ipc12G0018580 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc12G0018590 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc12G0018600 AT5G52280.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc12G0018610 AT2G36690.2 0 Protein belonging to the Fe-dependent 2-oxoglutarate dioxygenase superfamily, catalyzes the stereospecific hydration of GA12 to produce DHGA12, negatively regulates ABA sensitivity during germination, phototrophic establishment and seedling development. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0018620 #N/A #N/A #N/A #N/A Ipc12G0018630 AT5G04480.1 UDP-Glycosyltransferase superfamily protein Encodes a protein with sequence similarity to glycosyltransferases that is localized to the golgi apparatus and is involved in pollen tube development. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0018640 AT3G52180.1 dual specificity protein phosphatase (DsPTP1) family protein Encodes a plant-specific glucan phosphatase that contains a noncatalytic carbohydrate-binding module as well as a dual specificity protein phosphatase domain. SEX4 can dephosphorylate C6- and C3-glucosyl residues on native starch grains and related maltodextrin compounds in vitro. This protein interacts with the plant SnRK AKIN11, binds starch, and is localized in the chloroplast. sex4 mutants have elevated levels of starch. dual specificity protein phosphatase (DsPTP1) family protein;(source:Araport11) Ipc12G0018650 AT1G13820.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0018660 AT2G41560.4 0 Encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. Localized to the vacuole. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA11. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate). autoinhibited Ca(2+)-ATPase, isoform 4;(source:Araport11) Ipc12G0018670 AT3G52190.1 phosphate transporter traffic facilitator1 Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphate transporter traffic facilitator1;(source:Araport11) Ipc12G0018680 AT5G04500.1 glycosyltransferase family protein 47 Encodes a member of the CAZy Glycosyltransferase Family 64 that is involved in glycosylinositolphosphorylceramide and sphingolipid glycosylation. In mutants, seed germination was less sensitive to salt stress than in wild-type plants. [The protein was expected to be Golgi-localized based on function as well as the Golgi localization of its homolog GMT1. However, GFP-fusion proteins localized both to the ER and Golgi, and especially to ER when co-expressed with Golgi markers. Therefore, localization cannot confidently be defined. (pers. communication, J. Mortimer)] glycosyltransferase family protein 47;(source:Araport11) Ipc12G0018690 AT5G20680.6 0 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 16;(source:Araport11) Ipc12G0018700 AT1G71210.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0018710 AT5G20820.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc12G0018720 AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-related 0 inter-alpha-trypsin inhibitor heavy chain-like protein;(source:Araport11) Ipc12G0018730 AT1G72490.2 0 DRO1 is a member of the IGT gene family and has a unknown function . It is expressed in roots and involved in leaf root architecture, specifically the orientation of lateral root angles. Involved in determining lateral root branch angle. hypothetical protein;(source:Araport11) Ipc12G0018740 AT3G14080.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc12G0018750 AT1G19140.1 0 0 ubiquinone biosynthesis COQ9-like protein;(source:Araport11) Ipc12G0018760 AT3G42880.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0018770 AT3G42950.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0018780 AT1G19180.3 0 JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. JAZ1 interacts with MYB21/MYB24, the WD-repeat/bHLH/MYB complex and IIId bHLH factors (bHLH3, bHLH13, bHLH14 and bHLH17) to regulate jasmonate responses, including stamen development, trichome initiation, anthocyanin accumulation and plant defense.The mRNA is cell-to-cell mobile. jasmonate-zim-domain protein 1;(source:Araport11) Ipc12G0018790 AT5G20700.1 Protein of unknown function (DUF581) 0 senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc12G0018800 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0018810 AT1G19210.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0018820 AT1G19210.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0018830 AT5G20720.4 0 Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. chaperonin 20;(source:Araport11) Ipc12G0018840 AT1G19220.1 auxin response factor 19 Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin. auxin response factor 19;(source:Araport11) Ipc12G0018850 AT5G06839.3 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc12G0018860 AT2G40700.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box helicase family protein. Overexpression confers tolerance to salt stress. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0018870 AT1G74960.3 fatty acid biosynthesis 1 Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. fatty acid biosynthesis 1;(source:Araport11) Ipc12G0018880 AT5G20740.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc12G0018890 AT3G43110.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0018900 AT3G26060.1 Thioredoxin superfamily protein encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus Thioredoxin superfamily protein;(source:Araport11) Ipc12G0018910 AT1G19240.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0018920 AT1G19230.2 Riboflavin synthase-like superfamily protein 0 Riboflavin synthase-like superfamily protein;(source:Araport11) Ipc12G0018930 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0018940 AT5G20810.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc12G0018950 AT5G20820.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc12G0018960 AT2G03140.12 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0018970 AT3G43190.2 0 Encodes a protein with sucrose synthase activity (SUS4). sucrose synthase 4;(source:Araport11) Ipc12G0018980 AT3G43220.1 Phosphoinositide phosphatase family protein 0 Phosphoinositide phosphatase family protein;(source:Araport11) Ipc12G0018990 AT2G26460.1 RED family protein Encodes SMU2, a protein involved in RNA splicing. RED family protein;(source:Araport11) Ipc12G0019000 AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein 0 RING/FYVE/PHD-type zinc finger family protein;(source:Araport11) Ipc12G0019010 AT3G14270.2 0 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant. phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc12G0019020 AT1G73430.2 sec34-like family protein COG3 is a component of a putative conserved oligomeric Golgi (COG) complex that is thought to be involved in tethering of retrograde intra Golgi vesicles. In mutant pollen,golgi appear abnormal. It is required for proper deposition of cell wall materials in pollen tube growth. When homozygotes can be produced (by complementing the defect in pollen), the plants are embryo lethal suggesting an essential function. COG3 interacts with several other putative COG components. sec34-like family protein;(source:Araport11) Ipc12G0019030 AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes an essential protein of unknown function.OPNR is expressed in rapidly dividing cells and may function in cell cycle progression. It is expressed in mitochondria and the nuclear envelope. Loss of function results in embryo lethality and reduced transmission through the female. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0019040 AT5G24610.1 0 0 cyclic AMP-responsive element-binding protein;(source:Araport11) Ipc12G0019050 AT5G20860.2 0 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0019060 AT4G33230.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0019070 AT1G32010.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc12G0019080 AT2G26440.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0019090 AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0019100 AT4G33140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc12G0019110 AT5G20870.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc12G0019120 AT3G43300.3 0 AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. HOPM interactor 7;(source:Araport11) Ipc12G0019130 AT1G16720.1 high chlorophyll fluorescence phenotype 173 Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex. high chlorophyll fluorescence phenotype 173;(source:Araport11) Ipc12G0019140 AT3G13062.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc12G0019150 AT3G18930.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0019160 AT1G78980.1 STRUBBELIG-receptor family 5 0 STRUBBELIG-receptor family 5;(source:Araport11) Ipc12G0019170 AT3G02760.2 0 0 Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc12G0019180 AT5G35390.1 Leucine-rich repeat protein kinase family protein Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0019190 AT1G78930.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc12G0019200 AT1G78922.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0019210 AT1G16800.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0019220 AT3G20240.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc12G0019230 AT3G20250.3 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. APUM5 is involved in susceptibility to CMV and is not required for bacterial or fungal pathogen resistance although its expression is induced upon bacterial and fungal infection. It is involved in the osmotic, salt, and drought stress responses. pumilio 5;(source:Araport11) Ipc12G0019240 AT3G20260.1 Protein of unknown function (DUF1666) 0 DUF1666 family protein (DUF1666);(source:Araport11) Ipc12G0019250 AT1G51080.1 0 0 golgin family A protein;(source:Araport11) Ipc12G0019260 AT1G78900.2 vacuolar ATP synthase subunit A Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit A;(source:Araport11) Ipc12G0019270 AT1G50440.3 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc12G0019280 AT4G30010.1 0 0 ATP-dependent RNA helicase;(source:Araport11) Ipc12G0019290 AT1G16860.1 Ubiquitin-specific protease family C19-related protein Plasma membrane-localized proteins that negatively regulate cellulose synthesis by inhibiting the exocytosis of CESAs. Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc12G0019300 AT1G51540.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0019310 AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein 0 Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11) Ipc12G0019320 AT3G21150.1 B-box 32 Encodes a protein with a B-box domain predicted to act as a transcription factor. Expression of the BBX32 gene is affected by monochromatic red light. Genetic analysis shows BBX32 is under circadian control; it is a morning gene under clock regulation. B-box 32;(source:Araport11) Ipc12G0019330 AT1G51590.1 alpha-mannosidase 1 Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation. alpha-mannosidase 1;(source:Araport11) Ipc12G0019340 AT4G29905.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0019350 AT3G21190.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc12G0019360 AT4G31540.1 exocyst subunit exo70 family protein G1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein G1;(source:Araport11) Ipc12G0019370 #N/A #N/A #N/A #N/A Ipc12G0019380 AT3G21200.1 proton gradient regulation 7 Encodes a soluble glutamyl-tRNA reductase (GluTR) binding protein that forms a ternary complex with FLU and GluTR. proton gradient regulation 7;(source:Araport11) Ipc12G0019390 AT1G73090.1 0 0 WD repeat protein;(source:Araport11) Ipc12G0019400 AT5G06360.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc12G0019410 AT1G63470.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc12G0019420 AT1G51650.1 ATP synthase epsilon chain, mitochondrial 0 ATP synthase epsilon chain;(source:Araport11) Ipc12G0019430 AT5G49830.1 exocyst complex component 84B Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. exocyst complex component 84B;(source:Araport11) Ipc12G0019440 AT2G29100.1 glutamate receptor 2.9 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.9;(source:Araport11) Ipc12G0019450 AT2G24720.1 glutamate receptor 2.2 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.2;(source:Araport11) Ipc12G0019460 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc12G0019470 AT2G24720.1 glutamate receptor 2.2 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.2;(source:Araport11) Ipc12G0019480 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc12G0019500 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc12G0019490 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc12G0019510 AT2G29110.1 glutamate receptor 2.8 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8;(source:Araport11) Ipc12G0019520 AT5G27100.1 glutamate receptor 2.1 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.1;(source:Araport11) Ipc12G0019530 AT2G29110.1 glutamate receptor 2.8 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8;(source:Araport11) Ipc12G0019540 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc12G0019550 AT2G29110.1 glutamate receptor 2.8 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8;(source:Araport11) Ipc12G0019560 AT2G29110.2 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8;(source:Araport11) Ipc12G0019570 AT5G11210.10 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.5;(source:Araport11) Ipc12G0019580 AT1G73080.1 PEP1 receptor 1 Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. The mRNA is cell-to-cell mobile. PEP1 receptor 1;(source:Araport11) Ipc12G0019590 AT4G30330.1 Small nuclear ribonucleoprotein family protein Differs from PCP only in two amino acids, expression is regulated in a manner opposite to that of PCP in that it was upregulated in response to increasing ambient temperature. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc12G0019600 AT1G17745.1 D-3-phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase The mRNA is cell-to-cell mobile. D-3-phosphoglycerate dehydrogenase;(source:Araport11) Ipc12G0019610 AT2G31670.1 Stress responsive alpha-beta barrel domain protein 0 Stress responsive alpha-beta barrel domain protein;(source:Araport11) Ipc12G0019620 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc12G0019630 AT1G55915.4 0 DNA-protein crosslink repair protease. WSS1A is involved in DNA-protein crosslink (DPC) repair and acts in independent pathways of the nuclease MUS81 and the phosphodiesterase TDP1. WSS1A is involved in the repair of replicative DNA damage (determination of dead cells in the root meristem using propidium Iodide staining). CRISPR wss1A mutants are camptothecin (CPT) and cis-platin hypersensitive and exhibit a fasciated growth phenotype and shortened roots zinc ion binding protein;(source:Araport11) Ipc12G0019640 AT1G51660.1 mitogen-activated protein kinase kinase 4 Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. The mRNA is cell-to-cell mobile. mitogen-activated protein kinase kinase 4;(source:Araport11) Ipc12G0019650 AT3G13320.1 cation exchanger 2 low affinity calcium antiporter CAX2 The mRNA is cell-to-cell mobile. cation exchanger 2;(source:Araport11) Ipc12G0019660 AT1G72300.1 Leucine-rich receptor-like protein kinase family protein Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0019670 AT3G14360.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0019680 AT3G14350.1 STRUBBELIG-receptor family 7 0 STRUBBELIG-receptor family 7;(source:Araport11) Ipc12G0019690 AT1G53760.1 0 0 K+-H+ exchange-like protein;(source:Araport11) Ipc12G0019700 AT1G53800.1 0 0 muscle M-line assembly protein;(source:Araport11) Ipc12G0019710 AT1G72310.1 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3). RING/U-box superfamily protein;(source:Araport11) Ipc12G0019720 AT3G14310.1 pectin methylesterase 3 encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism. pectin methylesterase 3;(source:Araport11) Ipc12G0019730 AT1G53840.1 pectin methylesterase 1 encodes a pectin methylesterase pectin methylesterase 1;(source:Araport11) Ipc12G0019740 AT1G53850.2 20S proteasome alpha subunit E1 Encodes alpha5 subunit of 20s proteosome involved in protein degradation and RNA degradation. 20S proteasome alpha subunit E1;(source:Araport11) Ipc12G0019750 AT1G53860.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc12G0019760 AT3G14280.1 0 0 LL-diaminopimelate aminotransferase;(source:Araport11) Ipc12G0019770 AT3G14270.2 0 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant. phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc12G0019780 AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein 0 Late embryogenesis abundant 3 (LEA3) family protein;(source:Araport11) Ipc12G0019790 AT1G53903.1 Protein of unknown function (DUF581) 0 linoleate 9S-lipoxygenase-4 protein, putative (DUF581);(source:Araport11) Ipc12G0019800 AT3G43240.1 ARID/BRIGHT DNA-binding domain-containing protein 0 ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc12G0019810 AT3G14240.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc12G0019820 AT1G53910.3 related to AP2 12 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. It plays a key role in controlling root bending in response to hypoxia. related to AP2 12;(source:Araport11) Ipc12G0019830 AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0019840 AT3G14205.1 Phosphoinositide phosphatase family protein 0 Phosphoinositide phosphatase family protein;(source:Araport11) Ipc12G0019850 AT3G04770.2 40s ribosomal protein SA B 0 40s ribosomal protein SA B;(source:Araport11) Ipc12G0019860 AT1G72440.1 CCAAT-binding factor Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development. CCAAT-binding factor;(source:Araport11) Ipc12G0019870 AT3G14200.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc12G0019880 AT3G14172.3 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc12G0019890 AT3G28860.1 ATP binding cassette subfamily B19 Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. ATP binding cassette subfamily B19;(source:Araport11) Ipc12G0019900 AT1G11890.1 Synaptobrevin family protein member of SEC22 Gene Family Synaptobrevin family protein;(source:Araport11) Ipc12G0019910 AT5G66840.2 0 0 SAP domain-containing protein;(source:Araport11) Ipc12G0019920 AT1G72390.2 0 0 nuclear receptor coactivator;(source:Araport11) Ipc12G0019930 AT1G17370.1 oligouridylate binding protein 1B Encodes an RNA–binding protein involved in stress granule formation. Regulated by a transposable element small RNA. oligouridylate binding protein 1B;(source:Araport11) Ipc12G0019940 AT1G19180.3 0 JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. JAZ1 interacts with MYB21/MYB24, the WD-repeat/bHLH/MYB complex and IIId bHLH factors (bHLH3, bHLH13, bHLH14 and bHLH17) to regulate jasmonate responses, including stamen development, trichome initiation, anthocyanin accumulation and plant defense.The mRNA is cell-to-cell mobile. jasmonate-zim-domain protein 1;(source:Araport11) Ipc12G0019950 AT1G72470.1 exocyst subunit exo70 family protein D1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein D1;(source:Araport11) Ipc12G0019960 AT1G72490.2 0 DRO1 is a member of the IGT gene family and has a unknown function . It is expressed in roots and involved in leaf root architecture, specifically the orientation of lateral root angles. Involved in determining lateral root branch angle. hypothetical protein;(source:Araport11) Ipc12G0019970 AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-related 0 inter-alpha-trypsin inhibitor heavy chain-like protein;(source:Araport11) Ipc12G0019980 AT3G14075.3 0 0 Mono-/di-acylglycerol lipase, N-terminal;(source:Araport11) Ipc12G0019990 AT1G72510.2 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc12G0020000 AT1G54100.2 aldehyde dehydrogenase 7B4 Aldehyde dehydrogenase aldehyde dehydrogenase 7B4;(source:Araport11) Ipc12G0020020 AT4G14716.1 acireductone dioxygenase 1 Encodes an acireductone dioxygenase that is activated by interaction with a heterotrimeric G protein beta subunit. It is a metalloenzyme and is likely involved in the methionine salvage pathway. acireductone dioxygenase 1;(source:Araport11) Ipc12G0020010 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020030 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020040 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020050 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020060 AT1G51172.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0020070 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020080 AT1G54120.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0020090 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020100 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020110 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc12G0020120 AT1G17420.1 lipoxygenase 3 LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs). lipoxygenase 3;(source:Araport11) Ipc12G0020130 AT1G17420.1 lipoxygenase 3 LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs). lipoxygenase 3;(source:Araport11) Ipc12G0020140 AT1G17420.1 lipoxygenase 3 LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs). lipoxygenase 3;(source:Araport11) Ipc12G0020150 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc12G0020160 AT1G54130.1 RELA/SPOT homolog 3 This gene appears to be at least partially redundant with RSH2 (At3g14050). Guanosine tetraphosphate synthesized by RSH2/RSH3 (and CRSH At3g17470) to an unknown extent can repress chloroplast gene expression, and also reduce chloroplast size. RELA/SPOT homolog 3;(source:Araport11) Ipc12G0020170 AT3G13840.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc12G0020180 AT1G72570.1 Integrase-type DNA-binding superfamily protein 0 Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0020190 AT1G54210.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc12G0020200 AT1G72640.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0020210 AT1G72650.1 TRF-like 6 Arabidopsis thaliana myb family transcription factor (At1g72650) TRF-like 6;(source:Araport11) Ipc12G0020220 AT1G72660.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0020230 AT3G13980.1 0 0 SKI/DACH domain protein;(source:Araport11) Ipc12G0020240 AT3G13990.2 Kinase-related protein of unknown function (DUF1296) 0 dentin sialophosphoprotein, putative (DUF1296);(source:Araport11) Ipc12G0020250 AT3G14000.2 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein;(source:Araport11) Ipc12G0020260 AT5G13640.1 phospholipid:diacylglycerol acyltransferase arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT) phospholipid:diacylglycerol acyltransferase;(source:Araport11) Ipc12G0020270 AT3G14010.3 CTC-interacting domain 4 hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2. CTC-interacting domain 4;(source:Araport11) Ipc12G0020280 AT5G20510.1 alfin-like 5 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 5;(source:Araport11) Ipc12G0020290 AT1G72820.2 0 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc12G0020300 AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. DIR1 protein is cell-to-cell mobile and is transported via phloem sap. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0020310 AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. DIR1 protein is cell-to-cell mobile and is transported via phloem sap. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0020320 AT1G72790.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0020330 AT3G13940.1 DNA binding;DNA-directed RNA polymerases 0 DNA binding / DNA-directed RNA polymerase;(source:Araport11) Ipc12G0020340 AT1G72770.4 0 mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.The mRNA is cell-to-cell mobile. HYPERSENSITIVE TO ABA1;(source:Araport11) Ipc12G0020350 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc12G0020360 AT1G17530.1 translocase of inner mitochondrial membrane 23 Encodes a translocase of inner mitochondrial membrane. translocase of inner mitochondrial membrane 23;(source:Araport11) Ipc12G0020370 AT1G54220.2 Dihydrolipoamide acetyltransferase, long form protein Encodes a subunit of the mitochondrial pyruvate dehydrogenase complex. Dihydrolipoamide acetyltransferase, long form protein;(source:Araport11) Ipc12G0020380 AT1G54270.1 eif4a-2 member of eIF4A - eukaryotic initiation factor 4A eif4a-2;(source:Araport11) Ipc12G0020390 AT3G13790.1 Glycosyl hydrolases family 32 protein Encodes a protein with invertase activity. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc12G0020400 AT2G19460.1 Protein of unknown function (DUF3511) 0 DUF3511 domain protein (DUF3511);(source:Araport11) Ipc12G0020410 AT1G72710.1 casein kinase 1-like protein 2 Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. The mRNA is cell-to-cell mobile. casein kinase 1-like protein 2;(source:Araport11) Ipc12G0020420 AT3G13900.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Encodes a member of the P4 subfamily of P-type ATPases expressed in the pollen plasma membrane. Double mutants with ALA6 display pollen and pollen tube defects. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc12G0020430 AT1G72690.1 0 0 neurofilament heavy protein;(source:Araport11) Ipc12G0020440 AT1G72670.1 IQ-domain 8 0 IQ-domain 8;(source:Araport11) Ipc12G0020450 AT3G13890.2 myb domain protein 26 Encodes a putative transcription factor (MYB26). myb domain protein 26;(source:Araport11) Ipc12G0020460 AT3G13882.1 Ribosomal protein L34 0 Ribosomal protein L34;(source:Araport11) Ipc12G0020470 AT1G72880.2 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc12G0020480 AT1G17650.1 glyoxylate reductase 2 Glyoxylate reductase located in chloroplasts. glyoxylate reductase 2;(source:Araport11) Ipc12G0020490 AT1G17640.3 0 Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0020500 AT3G13790.1 Glycosyl hydrolases family 32 protein Encodes a protein with invertase activity. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc12G0020510 AT1G55110.3 0 0 indeterminate(ID)-domain 7;(source:Araport11) Ipc12G0020520 AT1G72990.4 0 0 beta-galactosidase 17;(source:Araport11) Ipc12G0020530 AT3G13845.2 0 0 transmembrane protein;(source:Araport11) Ipc12G0020540 AT1G76320.4 0 0 FAR1-related sequence 4;(source:Araport11) Ipc12G0020550 AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0020560 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0020570 AT1G72970.1 Glucose-methanol-choline (GMC) oxidoreductase family protein Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect. Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc12G0020580 AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3) 0 Root hair defective 3 GTP-binding protein (RHD3);(source:Araport11) Ipc12G0020590 AT3G13772.1 transmembrane nine 7 Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis. transmembrane nine 7;(source:Araport11) Ipc12G0020600 AT1G48130.1 1-cysteine peroxiredoxin 1 encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought. 1-cysteine peroxiredoxin 1;(source:Araport11) Ipc12G0020610 AT3G13750.1 beta galactosidase 1 beta-galactosidase, glycosyl hydrolase family 35 The mRNA is cell-to-cell mobile. beta galactosidase 1;(source:Araport11) Ipc12G0020620 AT1G55140.1 Ribonuclease III family protein Encodes one of two chloroplast Mini-RNase III-like enzymes in Arabidopsis. Double mutants display imprecise maturation of 23S rRNA and other rRNAs. Ribonuclease III family protein;(source:Araport11) Ipc12G0020630 AT1G55150.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc12G0020640 AT1G55160.1 0 0 WAS/WASL-interacting family protein;(source:Araport11) Ipc12G0020650 AT4G33000.2 calcineurin B-like protein 10 Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. In the shoot SCABP recruits the protein kinase SOS2 to the plasma membrane. SCABP is partially redundant with SOS3 but neither protein can fully complement the loss of the other protein. calcineurin B-like protein 10;(source:Araport11) Ipc12G0020660 AT2G28310.3 Protein of unknown function (DUF707) 0 trimethylguanosine synthase (DUF707);(source:Araport11) Ipc12G0020670 AT1G55180.1 phospholipase D alpha 4 member of C2-PLD. subfamily Represents a phospholipase D (PLD) gene with four exons, hence it is a member of the alpha class. Its amino acid sequence is quite different from other PLDs, therefore it might possess unique structural and/or catalytic properties. phospholipase D alpha 4;(source:Araport11) Ipc12G0020680 AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc12G0020690 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc12G0020700 AT4G31805.1 WRKY family transcription factor Encodes POLAR, a scaffold protein associated with cellular asymmetry of meristemoids. Its transcript levels change after inducing MUTE expression in a mute background. WRKY family transcription factor;(source:Araport11) Ipc12G0020710 AT1G17710.1 Pyridoxal phosphate phosphatase-related protein Encodes a phosphoethanolamine/phosphocholine phosphatase. It is likely to be involved in the liberation of inorganic phosphate from intracellular sources. Expression is upregulated in the shoot of cax1/cax3 mutant. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc12G0020720 AT1G17710.1 Pyridoxal phosphate phosphatase-related protein Encodes a phosphoethanolamine/phosphocholine phosphatase. It is likely to be involved in the liberation of inorganic phosphate from intracellular sources. Expression is upregulated in the shoot of cax1/cax3 mutant. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc12G0020730 AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55 type 2A protein serine/threonine phosphatase 55 kDa B Protein phosphatase 2A, regulatory subunit PR55;(source:Araport11) Ipc12G0020740 AT1G51700.1 DOF zinc finger protein 1 Encodes dof zinc finger protein (adof1). The mRNA is cell-to-cell mobile. DOF zinc finger protein 1;(source:Araport11) Ipc12G0020750 AT4G10955.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0020760 AT3G21290.1 dentin sialophosphoprotein-related 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc12G0020770 AT1G51720.3 0 0 Amino acid dehydrogenase family protein;(source:Araport11) Ipc12G0020780 AT1G73020.3 0 0 anoctamin-like protein;(source:Araport11) Ipc12G0020790 AT2G19730.3 Ribosomal L28e protein family 0 Ribosomal L28e protein family;(source:Araport11) Ipc12G0020800 AT3G21295.2 0 Pro-Trp-Pro-Trp repeat protein. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc12G0020810 AT1G51730.1 Ubiquitin-conjugating enzyme family protein 0 Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc12G0020830 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc12G0020820 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc12G0020840 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc12G0020850 AT5G11730.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc12G0020860 AT3G21320.1 0 0 EARLY FLOWERING protein;(source:Araport11) Ipc12G0020870 AT4G29990.1 Leucine-rich repeat transmembrane protein kinase protein 0 Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11) Ipc12G0020880 AT2G04220.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc12G0020890 AT2G33070.2 nitrile specifier protein 2 Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation. nitrile specifier protein 2;(source:Araport11) Ipc12G0020900 AT3G21350.1 RNA polymerase transcriptional regulation mediator-related 0 RNA polymerase transcriptional regulation mediator-like protein;(source:Araport11) Ipc12G0020910 AT1G14520.2 myo-inositol oxygenase 1 Encodes MIOX1. Belongs to myo-inositol oxygenase gene family. myo-inositol oxygenase 1;(source:Araport11) Ipc12G0020920 AT3G21351.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0020930 AT3G16370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc12G0020940 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc12G0020950 AT1G52080.2 0 0 actin binding protein family;(source:Araport11) Ipc12G0020960 AT4G07960.2 0 encodes a gene similar to cellulose synthase Cellulose-synthase-like C12;(source:Araport11) Ipc12G0020970 AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc12G0020980 AT4G29340.1 profilin 4 Profilin is a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton in eukaryotes, including higher plants. PRF4 and PRF5 are late pollen-specific and are not detectable in other cell types of the plant body including microspores and root hairs. Immunocytochemical studies at the subcellular level reveal that both the constitutive and pollen-specific profilins are abundant in the cytoplasm. In vegetative cell types, such as root apical cells, profilins showed localization to nuclei in addition to the cytoplasmic staining. profilin 4;(source:Araport11) Ipc12G0020990 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc12G0021000 AT1G42430.2 0 Novel plant specific, chloroplast localized protein that is involved in regulation of starch degradation. inactive purple acid phosphatase-like protein;(source:Araport11) Ipc12G0021010 AT2G19860.1 hexokinase 2 Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses. hexokinase 2;(source:Araport11) Ipc12G0021020 AT3G16500.1 phytochrome-associated protein 1 phytochrome-associated protein 1 (PAP1) phytochrome-associated protein 1;(source:Araport11) Ipc12G0021030 AT4G12540.3 0 0 hypothetical protein;(source:Araport11) Ipc12G0021040 AT1G79730.1 hydroxyproline-rich glycoprotein family protein Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. Member of PAF-C complex. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0021050 AT3G16350.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0021060 AT1G79750.1 NADP-malic enzyme 4 The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed. NADP-malic enzyme 4;(source:Araport11) Ipc12G0021070 AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance. The mRNA is cell-to-cell mobile. ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) Ipc12G0021080 AT1G79760.1 downstream target of AGL15-4 Identified as target of the AGL15 binding motif CArG. downstream target of AGL15-4;(source:Araport11) Ipc12G0021090 AT1G15215.2 0 Encodes SHH1, a homeodomain protein required for DNA methylation. It is an atypical RNA-directed DNA methylation component, and functions in transcriptional silencing through both DNA methylation-dependent and -independent pathways. SAWADEE HOMEODOMAIN protein;(source:Araport11) Ipc12G0021100 AT2G25760.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Protein kinase family protein;(source:Araport11) Ipc12G0021110 AT1G52140.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc12G0021120 AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc12G0021130 AT4G32890.1 GATA transcription factor 9 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 9;(source:Araport11) Ipc12G0021140 AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein 0 mitotic phosphoprotein N end (MPPN) family protein;(source:Araport11) Ipc12G0021150 AT3G16290.1 AAA-type ATPase family protein Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). AAA-type ATPase family protein;(source:Araport11) Ipc12G0021160 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0021170 AT3G16240.1 delta tonoplast integral protein Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane. The mRNA is cell-to-cell mobile. delta tonoplast integral protein;(source:Araport11) Ipc12G0021180 AT5G06220.3 0 0 LETM1-like protein;(source:Araport11) Ipc12G0021190 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc12G0021200 AT3G27750.1 0 Encodes a pentatricopeptide repeat (PPR) protein required for the splicing of specific group II introns. Null alleles are embryo lethal. PPR containing protein;(source:Araport11) Ipc12G0021210 AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0021220 AT3G16170.1 AMP-dependent synthetase and ligase family protein Encodes a malonyl-CoA synthetase that is localized to the cytosol and mitochondrion. AAE13 produces two transcripts one of which includes an N terminal mitochondrial targeting motif. Loss of function of the mtAAE13 product results in growth arrest and lethality. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc12G0021230 AT1G52200.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc12G0021240 AT1G15220.2 cytochrome c biogenesis protein family Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2. cytochrome c biogenesis protein family;(source:Araport11) Ipc12G0021250 #N/A #N/A #N/A #N/A Ipc12G0021260 AT1G79820.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc12G0021270 AT1G79830.3 golgin candidate 5 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c). golgin Putative 5;(source:Araport11) Ipc12G0021280 AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein Hydroxyphenylpyruvate reductase (HPPR), which catalyzes the reduction of 4-hydroxyphenylpyruvic acid (pHPP) to 4-hydroxyphenyllactic acid (pHPL). Together with HPPR3 and TAT1 involved in the biosynthesis of pHPL from tyrosine. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc12G0021290 AT1G52245.1 0 0 dynein light chain LC6, flagellar outer arm-like protein;(source:Araport11) Ipc12G0021300 AT1G45688.1 0 CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress. transmembrane protein;(source:Araport11) Ipc12G0021310 AT3G16110.1 PDI-like 1-6 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). PDI-like 1-6;(source:Araport11) Ipc12G0021320 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc12G0021330 AT1G15230.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0021340 AT1G52290.1 Protein kinase superfamily protein Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). Protein kinase superfamily protein;(source:Araport11) Ipc12G0021350 AT1G15240.2 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0 phox (PX) domain-containing protein;(source:Araport11) Ipc12G0021360 AT1G15260.1 0 0 LOW protein: ATP-dependent RNA helicase-like protein;(source:Araport11) Ipc12G0021370 AT3G16080.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc12G0021380 AT3G16060.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc12G0021390 AT3G16050.1 pyridoxine biosynthesis 1.2 Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation. pyridoxine biosynthesis 1.2;(source:Araport11) Ipc12G0021400 AT1G79900.1 Mitochondrial substrate carrier family protein encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol Mitochondrial substrate carrier family protein;(source:Araport11) Ipc12G0021410 AT1G79910.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc12G0021420 AT1G52320.4 0 0 kinesin-like protein;(source:Araport11) Ipc12G0021430 AT4G13270.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0021440 AT1G52343.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0021450 AT1G79950.1 RAD3-like DNA-binding helicase protein Encodes a homologue of human Regulator of Telomere Elongation Helicase1 (RTEL1). Plays a central role in the preservation of genome stability. RAD3-like DNA-binding helicase protein;(source:Araport11) Ipc12G0021460 AT1G79930.1 heat shock protein 91 encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock heat shock protein 91;(source:Araport11) Ipc12G0021470 AT1G73325.1 Kunitz family trypsin and protease inhibitor protein 0 Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021480 AT1G73325.1 Kunitz family trypsin and protease inhibitor protein 0 Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021490 AT1G73330.1 drought-repressed 4 encodes a plant-specific protease inhibitor-like protein whose transcript level in root disappears in response to progressive drought stress. The decrease in transcript level is independent from abscisic acid level. drought-repressed 4;(source:Araport11) Ipc12G0021500 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021510 AT1G73325.1 Kunitz family trypsin and protease inhibitor protein 0 Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021520 AT3G51460.1 Phosphoinositide phosphatase family protein Encodes RHD4 (ROOT HAIR DEFECTIVE4), a phosphatidylinositol-4-phosphate phosphatase required for root hair development. The mRNA is cell-to-cell mobile. Phosphoinositide phosphatase family protein;(source:Araport11) Ipc12G0021530 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021540 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021550 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021560 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021570 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0021580 AT3G47510.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0021590 AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain protein/ABA-responsive-like protein;(source:Araport11) Ipc12G0021600 AT1G34130.1 staurosporin and temperature sensitive 3-like b Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase. staurosporin and temperature sensitive 3-like b;(source:Araport11) Ipc12G0021610 AT1G62710.1 beta vacuolar processing enzyme Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins. beta vacuolar processing enzyme;(source:Araport11) Ipc12G0021620 AT1G64570.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0021630 AT5G54300.1 Protein of unknown function (DUF761) 0 cotton fiber-like protein (DUF761);(source:Araport11) Ipc12G0021640 AT5G36220.1 cytochrome p450 81d1 member of CYP81D family of cytochrome p450s. This gene was originally called CYP91A1, but was later renamed to CYP81D1. cytochrome p450 81d1;(source:Araport11) Ipc12G0021650 AT3G48470.2 0 0 embryo defective 2423;(source:Araport11) Ipc12G0021660 AT5G17300.1 Homeodomain-like superfamily protein Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner. Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0021670 AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0021680 AT5G11880.1 Pyridoxal-dependent decarboxylase family protein Meso-diaminopimelate decarboxylase which catalyzes the decarboxylation of mesodiaminopimelate, the final reaction in the diaminopimelate L-lysine biosynthetic pathway. Pyridoxal-dependent decarboxylase family protein;(source:Araport11) Ipc12G0021690 AT1G73370.3 0 Encodes a protein with sucrose synthase activity (SUS6). sucrose synthase 6;(source:Araport11) Ipc12G0021700 AT1G48410.1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus. Stabilizer of iron transporter SufD / Polynucleotidyl transferase;(source:Araport11) Ipc12G0021710 AT3G17700.1 cyclic nucleotide-binding transporter 1 cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. The mRNA is cell-to-cell mobile. cyclic nucleotide-binding transporter 1;(source:Araport11) Ipc12G0021720 AT1G48420.3 0 Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels. D-cysteine desulfhydrase;(source:Araport11) Ipc12G0021730 AT1G73460.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0021740 AT1G73450.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0021750 AT2G01940.1 C2H2-like zinc finger protein Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. C2H2-like zinc finger protein;(source:Araport11) Ipc12G0021760 AT5G50860.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0021770 AT5G50850.1 Transketolase family protein 0 Transketolase family protein;(source:Araport11) Ipc12G0021780 AT5G50850.1 Transketolase family protein 0 Transketolase family protein;(source:Araport11) Ipc12G0021790 AT5G48520.2 0 Encodes AUGMIN subunit3 (AUG3), a homolog of animal dim gamma-tubulin 3/human augmin-like complex, subunit 3. Plays a critical role in microtubule organization during plant cell division. HAUS augmin-like complex subunit;(source:Araport11) Ipc12G0021800 AT2G36480.2 ENTH/VHS family protein 0 pre-mRNA cleavage complex 2 Pcf11-like protein;(source:Araport11) Ipc12G0021810 AT1G09130.3 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc12G0021820 AT3G48770.2 0 0 ATP/DNA binding protein;(source:Araport11) Ipc12G0021830 AT2G29220.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc12G0021840 AT5G50810.1 translocase inner membrane subunit 8 Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. translocase inner membrane subunit 8;(source:Araport11) Ipc12G0021850 AT3G26935.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc12G0021860 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc12G0021870 AT5G50780.2 0 MORC4 is a member of a family of GHKL ATPases. It is localized in the nuceloplasm and adjacent to chromocenters. Along with MORC7, it appears to repress the expression Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc12G0021880 AT5G41040.1 HXXXD-type acyl-transferase family protein Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc12G0021890 AT1G44820.1 Peptidase M20/M25/M40 family protein 0 Peptidase M20/M25/M40 family protein;(source:Araport11) Ipc12G0021900 AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein Encodes a member of the metallo-beta-lactamase protein family that plays a vital role in embryo morphogenesis and apical-basal pattern formation by regulating chloroplast development. In bacteria, RNase J plays an important role in rRNA maturation and in the 5′ stability of mRNA. RNA-metabolising metallo-beta-lactamase family protein;(source:Araport11) Ipc02G0002600 AT3G52240.1 0 0 transcriptional regulator ATRX;(source:Araport11) Ipc02G0002610 AT3G28890.2 receptor like protein 43 0 receptor like protein 43;(source:Araport11) Ipc02G0002620 AT1G63860.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0002630 AT3G46730.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc02G0002640 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002650 AT3G05070.1 0 0 Cwf18 pre-mRNA splicing factor;(source:Araport11) Ipc02G0002660 #N/A #N/A #N/A #N/A Ipc02G0002670 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0002680 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc02G0002690 AT1G73380.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0002700 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0002710 AT3G19980.1 flower-specific, phytochrome-associated protein phosphatase 3 Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.Acts antagonistically to SnRK2 to regulate ABI5 phosphorylation. It inteacts with NRP which results in tethering to endosomes leading to its degradation. flower-specific, phytochrome-associated protein phosphatase 3;(source:Araport11) Ipc02G0002720 #N/A #N/A #N/A #N/A Ipc02G0002730 AT5G63810.1 beta-galactosidase 10 member of Glycoside Hydrolase Family 35 beta-galactosidase 10;(source:Araport11) Ipc02G0002740 AT4G23000.2 0 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc02G0002750 AT5G63810.1 beta-galactosidase 10 member of Glycoside Hydrolase Family 35 beta-galactosidase 10;(source:Araport11) Ipc02G0002760 AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0002770 AT5G57170.1 Tautomerase/MIF superfamily protein 0 Tautomerase/MIF superfamily protein;(source:Araport11) Ipc02G0002780 AT1G75430.2 0 0 BEL1-like homeodomain 11;(source:Araport11) Ipc02G0002790 AT5G50700.1 hydroxysteroid dehydrogenase 1 Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. hydroxysteroid dehydrogenase 1;(source:Araport11) Ipc02G0002800 AT5G50700.1 hydroxysteroid dehydrogenase 1 Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. hydroxysteroid dehydrogenase 1;(source:Araport11) Ipc02G0002810 AT1G73340.1 Cytochrome P450 superfamily protein ADTO1 is required for the activation of systemic acquired resistance. Cytochrome P450 superfamily protein;(source:Araport11) Ipc02G0002820 AT1G73350.2 0 0 ankyrin repeat protein;(source:Araport11) Ipc02G0002830 AT2G15180.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0002840 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0002850 AT5G27620.1 cyclin H;1 core cell cycle genes The mRNA is cell-to-cell mobile. cyclin H;(source:Araport11) Ipc02G0002860 AT1G10850.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0002870 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc02G0002880 AT1G17820.1 Putative integral membrane protein conserved region (DUF2404) 0 testis-expressed sequence 2-like protein (DUF2404);(source:Araport11) Ipc02G0002890 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0002900 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc02G0002910 AT5G17250.1 Alkaline-phosphatase-like family protein 0 Alkaline-phosphatase-like family protein;(source:Araport11) Ipc02G0002920 AT5G23690.1 Polynucleotide adenylyltransferase family protein 0 Polynucleotide adenylyltransferase family protein;(source:Araport11) Ipc02G0002930 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0002940 AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0002950 AT5G12240.2 0 0 octanoyltransferase;(source:Araport11) Ipc02G0002960 AT5G51750.1 subtilase 1.3 0 subtilase 1.3;(source:Araport11) Ipc02G0002970 AT3G62920.1 0 0 zinc metalloproteinase aureolysin;(source:Araport11) Ipc02G0002980 AT4G25910.1 NFU domain protein 3 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast. The mRNA is cell-to-cell mobile. NFU domain protein 3;(source:Araport11) Ipc02G0002990 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0003000 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0003010 AT3G48710.1 DEK domain-containing chromatin associated protein 0 DEK domain-containing chromatin associated protein;(source:Araport11) Ipc02G0003020 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc02G0003030 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0003040 AT5G54780.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc02G0003050 AT4G11720.1 hapless 2 Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane. Target promoter of the male germline-specific transcription factor DUO1. hapless 2;(source:Araport11) Ipc02G0003060 AT5G13180.1 NAC domain containing protein 83 Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation. NAC domain containing protein 83;(source:Araport11) Ipc02G0003070 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0003080 AT5G50850.1 Transketolase family protein 0 Transketolase family protein;(source:Araport11) Ipc02G0003090 AT1G60220.1 UB-like protease 1D Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner. UB-like protease 1D;(source:Araport11) Ipc02G0003100 AT5G14030.4 translocon-associated protein beta (TRAPB) family protein 0 translocon-associated protein beta (TRAPB) family protein;(source:Araport11) Ipc02G0003110 AT3G48820.1 Glycosyltransferase family 29 (sialyltransferase) family protein Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus. Glycosyltransferase family 29 (sialyltransferase) family protein;(source:Araport11) Ipc02G0003120 AT1G61840.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc02G0003130 AT3G30280.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0003140 AT5G36290.2 Uncharacterized protein family (UPF0016) 0 Uncharacterized protein family (UPF0016);(source:Araport11) Ipc02G0003150 AT1G65290.1 mitochondrial acyl carrier protein 2 Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. The mRNA is cell-to-cell mobile. mitochondrial acyl carrier protein 2;(source:Araport11) Ipc02G0003160 AT5G16490.1 ROP-interactive CRIB motif-containing protein 4 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. ROP-interactive CRIB motif-containing protein 4;(source:Araport11) Ipc02G0003170 AT1G65540.3 0 0 LETM1-like protein;(source:Araport11) Ipc02G0003180 AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein 0 ACT domain-containing small subunit of acetolactate synthase protein;(source:Araport11) Ipc02G0003190 AT3G03305.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc02G0003200 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc02G0003210 AT2G43240.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc02G0003220 AT1G65480.2 0 FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). Together with TSF, it plays an antagonistic role to TFL1 in the determination of inflorescence meristem identity. FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc02G0003230 AT2G43710.1 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc02G0003240 AT3G03340.1 LUC7 related protein 0 LUC7 related protein;(source:Araport11) Ipc02G0003250 AT2G43180.3 Phosphoenolpyruvate carboxylase family protein 0 Phosphoenolpyruvate carboxylase family protein;(source:Araport11) Ipc02G0003260 AT4G15140.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0003270 AT3G22150.2 0 Involved in RNA editing of plastid atpF and mitochondrial nad5. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0003280 AT3G21790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0003290 AT2G32260.1 phosphorylcholine cytidylyltransferase 0 phosphorylcholine cytidylyltransferase;(source:Araport11) Ipc02G0003300 AT4G39720.4 0 0 VQ motif-containing protein;(source:Araport11) Ipc02G0003310 AT3G11470.4 0 0 4-phosphopantetheinyl transferase superfamily;(source:Araport11) Ipc02G0003320 AT4G15120.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc02G0003330 AT4G15110.1 cytochrome P450, family 97, subfamily B, polypeptide 3 member of CYP97B cytochrome P450, family 97, subfamily B, polypeptide 3;(source:Araport11) Ipc02G0003340 AT4G36910.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc02G0003350 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc02G0003360 AT2G43490.8 0 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc02G0003370 AT3G06040.3 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 0 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11) Ipc02G0003380 AT5G63200.1 tetratricopeptide repeat (TPR)-containing protein 0 tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc02G0003390 AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc02G0003400 #N/A #N/A #N/A #N/A Ipc02G0003410 AT2G32240.1 0 PAMP induced protein involved in defense response. Interaction with UBAC2 proteins in the ER, is necessary for PAMP mediated accumulation of the callose synthase PMR4. early endosome antigen;(source:Araport11) Ipc02G0003420 AT5G41920.1 GRAS family transcription factor Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification. GRAS family transcription factor;(source:Araport11) Ipc02G0003430 AT4G15000.1 Ribosomal L27e protein family 0 Ribosomal L27e protein family;(source:Araport11) Ipc02G0003440 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc02G0003450 AT2G32190.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc02G0003460 AT5G23380.3 0 0 hypothetical protein (DUF789);(source:Araport11) Ipc02G0003470 AT3G02800.1 Tyrosine phosphatase family protein Encodes an atypical dual-specificity phosphatase. Tyrosine phosphatase family protein;(source:Araport11) Ipc02G0003480 AT3G22260.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc02G0003490 AT1G06010.1 0 0 basic leucine zipper/W2 domain protein;(source:Araport11) Ipc02G0003500 AT3G50690.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0003510 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0003520 AT3G02750.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0003530 AT3G02740.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0003540 AT5G16530.1 Auxin efflux carrier family protein Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis. Auxin efflux carrier family protein;(source:Araport11) Ipc02G0003550 AT2G07687.1 Cytochrome c oxidase, subunit III 0 Cytochrome c oxidase, subunit III;(source:Araport11) Ipc02G0003560 AT1G65410.1 non-intrinsic ABC protein 11 Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11;(source:Araport11) Ipc02G0003570 AT3G61650.1 gamma-tubulin Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. gamma-tubulin;(source:Araport11) Ipc02G0003580 AT5G50300.2 0 Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2). Xanthine/uracil permease family protein;(source:Araport11) Ipc02G0003590 AT1G24440.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0003600 AT2G34740.1 Protein phosphatase 2C family protein 0 protein phosphatase 2C family protein;(source:Araport11) Ipc02G0003610 AT4G36590.1 MADS-box transcription factor family protein 0 MADS-box transcription factor family protein;(source:Araport11) Ipc02G0003620 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0003630 #N/A #N/A #N/A #N/A Ipc02G0003640 AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc02G0003650 AT1G09210.1 calreticulin 1b Encodes one of three Arabidopsis calreticulins.Post-transcriptionally regulates together with CRT1 VAMP721/722 levels under ER stress. calreticulin 1b;(source:Araport11) Ipc02G0003660 AT3G48430.1 relative of early flowering 6 Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins. The mRNA is cell-to-cell mobile. relative of early flowering 6;(source:Araport11) Ipc02G0003670 AT3G48425.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0003680 AT3G48420.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc02G0003690 AT5G63190.2 MA3 domain-containing protein Encodes a member of the MRF (MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR) gene family under TOR control that is transcriptionally induced by dark and starvation. MRF1 can be phosphorylated in vitro by S6K1 and S6K2. MA3 domain-containing protein;(source:Araport11) Ipc02G0003700 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc02G0003710 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc02G0003720 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc02G0003730 #N/A #N/A #N/A #N/A Ipc02G0003740 #N/A #N/A #N/A #N/A Ipc02G0003750 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc02G0003760 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc02G0003770 AT4G29750.1 CRS1 / YhbY (CRM) domain-containing protein 0 CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc02G0003780 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0003790 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0003800 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0003810 AT3G53240.2 0 0 receptor like protein 45;(source:Araport11) Ipc02G0003820 AT4G24790.4 0 0 AAA-type ATPase family protein;(source:Araport11) Ipc02G0003830 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0003840 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0003850 AT5G50230.1 Transducin/WD40 repeat-like superfamily protein autophagy-related (ATG) gene Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0003860 AT4G24760.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0003870 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0003880 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0003890 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc02G0003900 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0003910 AT3G10700.1 galacturonic acid kinase Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested. galacturonic acid kinase;(source:Araport11) Ipc02G0003920 AT2G31880.1 Leucine-rich repeat protein kinase family protein Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0003930 AT1G32500.1 non-intrinsic ABC protein 6 Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data. non-intrinsic ABC protein 6;(source:Araport11) Ipc02G0003940 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc02G0003950 AT3G48330.4 0 Encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination. protein-l-isoaspartate methyltransferase 1;(source:Araport11) Ipc02G0003960 AT5G50250.1 chloroplast RNA-binding protein 31B Encodes a RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Supports editing of specific CP31A-dependent sites. chloroplast RNA-binding protein 31B;(source:Araport11) Ipc02G0003970 AT5G48220.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc02G0003980 AT5G14420.4 RING domain ligase2 Encodes RGLG2 (RING domain ligase 2), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase2;(source:Araport11) Ipc02G0003990 AT4G18905.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0004000 AT5G57200.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc02G0004010 AT3G18730.1 tetratricopeptide repeat (TPR)-containing protein Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc02G0004020 AT3G48290.1 cytochrome P450, family 71, subfamily A, polypeptide 24 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 24;(source:Araport11) Ipc02G0004080 AT3G48320.1 cytochrome P450, family 71, subfamily A, polypeptide 21 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 21;(source:Araport11) Ipc02G0004030 AT2G30750.1 cytochrome P450, family 71, subfamily A, polypeptide 12 putative cytochrome P450 cytochrome P450 family 71 polypeptide;(source:Araport11) Ipc02G0004040 AT1G33730.2 0 0 cytochrome P450, family 76, subfamily C, polypeptide 5;(source:Araport11) Ipc02G0004050 AT5G46410.2 SCP1-like small phosphatase 4 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). The mRNA is cell-to-cell mobile. SCP1-like small phosphatase 4;(source:Araport11) Ipc02G0004060 AT3G48280.1 cytochrome P450, family 71, subfamily A, polypeptide 25 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 25;(source:Araport11) Ipc02G0004070 AT2G26450.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc02G0004090 AT3G48270.1 cytochrome P450, family 71, subfamily A, polypeptide 26 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 26;(source:Araport11) Ipc02G0004100 AT3G48270.1 cytochrome P450, family 71, subfamily A, polypeptide 26 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 26;(source:Araport11) Ipc02G0004110 AT1G33730.2 0 0 cytochrome P450, family 76, subfamily C, polypeptide 5;(source:Araport11) Ipc02G0004120 AT2G30750.1 cytochrome P450, family 71, subfamily A, polypeptide 12 putative cytochrome P450 cytochrome P450 family 71 polypeptide;(source:Araport11) Ipc02G0004130 AT4G24740.1 FUS3-complementing gene 2 a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. LAMMER-type protein kinase AFC2;(source:Araport11) Ipc02G0004140 AT5G50210.1 quinolinate synthase Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast. quinolinate synthase;(source:Araport11) Ipc02G0004150 AT5G47430.5 0 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc02G0004160 AT5G50210.1 quinolinate synthase Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast. quinolinate synthase;(source:Araport11) Ipc02G0004170 AT5G50210.1 quinolinate synthase Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast. quinolinate synthase;(source:Araport11) Ipc02G0004180 AT5G50210.1 quinolinate synthase Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast. quinolinate synthase;(source:Araport11) Ipc02G0004190 AT3G48260.1 with no lysine (K) kinase 3 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. with no lysine (K) kinase 3;(source:Araport11) Ipc02G0004200 AT4G20360.2 0 Nuclear transcribed, plastid localized EF-Tu translation elongation factor. Referred to as AtRabE1b in DOI:10.1104/pp.013052. However, wider community usage and more publications assign the symbol RabE1b to At5g59840. RAB GTPase homolog E1B;(source:Araport11) Ipc02G0004210 AT3G05700.1 Drought-responsive family protein Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress. Drought-responsive family protein;(source:Araport11) Ipc02G0004220 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0004230 AT3G15190.1 chloroplast 30S ribosomal protein S20, putative 0 chloroplast 30S ribosomal protein S20;(source:Araport11) Ipc02G0004240 AT4G24710.3 0 Encodes an AAA+ ATPase that mediates meiotic chromosome remodeling and crossover maturation. pachytene checkpoint-like protein;(source:Araport11) Ipc02G0004250 AT4G24700.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0004260 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc02G0004270 AT5G50175.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0004280 #N/A #N/A #N/A #N/A Ipc02G0004290 AT3G48240.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc02G0004300 AT1G71020.2 ARM repeat superfamily protein Encodes a nuclear localized plant U-Box protein that interacts with MYC2 and regulates its stability by acting as an E3 ubiquitin ligase and polyubiquitinating MYC2. By this mechanism, it targets MYC2 for destruction thereby affecting JA signaling. ARM repeat superfamily protein;(source:Araport11) Ipc02G0004310 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc02G0004320 AT5G50160.1 ferric reduction oxidase 8 Encodes a ferric chelate reductase that is expressed in shoots and flowers. ferric reduction oxidase 8;(source:Araport11) Ipc02G0004330 AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc02G0004340 AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc02G0004350 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0004360 AT2G42490.1 Copper amine oxidase family protein Peroxisome-localized copper amine oxidase involved in lateral root formation. Copper amine oxidase family protein;(source:Araport11) Ipc02G0004370 AT2G42490.1 Copper amine oxidase family protein Peroxisome-localized copper amine oxidase involved in lateral root formation. Copper amine oxidase family protein;(source:Araport11) Ipc02G0004380 AT5G57590.1 adenosylmethionine-8-amino-7-oxononanoate transaminases Encodes a bifunctional enzyme with both dethiobiotin synthetase and diaminopelargonic acid aminotransferase activities that is involved in biotin synthesis. adenosylmethionine-8-amino-7-oxononanoate transaminase;(source:Araport11) Ipc02G0004390 AT4G01680.3 myb domain protein 55 Encodes a putative transcription factor (MYB55). myb domain protein 55;(source:Araport11) Ipc02G0004400 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0004410 AT5G63110.1 histone deacetylase 6 RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing. histone deacetylase 6;(source:Araport11) Ipc02G0004420 AT1G64310.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat (PPR) protein involved in RNA editing in mitochondria. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0004430 AT3G01570.1 Oleosin family protein 0 Oleosin family protein;(source:Araport11) Ipc02G0004440 AT5G14540.1 Protein of unknown function (DUF1421) 0 basic salivary proline-rich-like protein (DUF1421);(source:Araport11) Ipc02G0004450 AT5G50130.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0004460 AT3G48210.1 0 0 kinetochore protein;(source:Araport11) Ipc02G0004470 AT2G33840.1 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial 0 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial;(source:Araport11) Ipc02G0004480 AT3G14810.2 mechanosensitive channel of small conductance-like 5 0 mechanosensitive channel of small conductance-like 5;(source:Araport11) Ipc02G0004490 AT5G63050.1 embryo defective 2759 0 embryo defective 2759;(source:Araport11) Ipc02G0004500 AT5G63040.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0004510 AT4G27910.1 SET domain protein 16 Encodes a SET domain containing protein, putative H3K4 methyltransferase. SET domain protein 16;(source:Araport11) Ipc02G0004520 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0004530 AT3G11090.1 LOB domain-containing protein 21 0 LOB domain-containing protein 21;(source:Araport11) Ipc02G0004540 AT3G51560.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0004550 AT1G59620.1 Disease resistance protein (CC-NBS-LRR class) family Encodes CW9. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0004560 AT1G19100.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes a member of the conserved Microrchidia (MORC) adenosine triphosphatase (ATPase) family, predicted to catalyze alterations in chromosome superstructure. Required for heterochromatin condensation and gene silencing. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc02G0004570 AT5G63030.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc02G0004580 AT5G17990.1 tryptophan biosynthesis 1 Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. The mRNA is cell-to-cell mobile. tryptophan biosynthesis 1;(source:Araport11) Ipc02G0004590 AT3G48195.1 Phox (PX) domain-containing protein 0 Phox (PX) domain-containing protein;(source:Araport11) Ipc02G0004600 AT5G33320.1 Glucose-6-phosphate/phosphate translocator-related Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids. The mRNA is cell-to-cell mobile. Glucose-6-phosphate/phosphate translocator-like protein;(source:Araport11) Ipc02G0004610 AT4G18770.1 myb domain protein 98 MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects. myb domain protein 98;(source:Araport11) Ipc02G0004620 AT5G62930.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc02G0004630 AT4G22220.1 SufE/NifU family protein Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein. SufE/NifU family protein;(source:Araport11) Ipc02G0004640 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc02G0004650 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0004660 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc02G0004670 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc02G0004680 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0004690 AT3G48550.1 0 0 SHOOT GRAVITROPISM-like protein;(source:Araport11) Ipc02G0004710 AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0004700 AT1G08065.1 alpha carbonic anhydrase 5 0 alpha carbonic anhydrase 5;(source:Araport11) Ipc02G0004720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0004730 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0004740 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0004750 AT5G58730.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc02G0004760 AT5G40340.1 Tudor/PWWP/MBT superfamily protein PWWP domain protein involved in regulation of FLC and flowering time. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc02G0004770 AT5G62940.1 Dof-type zinc finger DNA-binding family protein HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc02G0004780 AT1G01400.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0004790 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0004800 AT2G02080.5 0 C2H2 BIRD transcription factor family. indeterminate(ID)-domain 4;(source:Araport11) Ipc02G0004810 AT2G27310.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc02G0004820 #N/A #N/A #N/A #N/A Ipc02G0004830 AT3G51560.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0004840 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc02G0004850 AT4G27910.1 SET domain protein 16 Encodes a SET domain containing protein, putative H3K4 methyltransferase. SET domain protein 16;(source:Araport11) Ipc02G0004860 AT5G63040.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0004870 AT5G63050.1 embryo defective 2759 0 embryo defective 2759;(source:Araport11) Ipc02G0004880 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc02G0004890 AT1G05300.1 zinc transporter 5 precursor member of Fe(II) transporter isolog family zinc transporter 5 precursor;(source:Araport11) Ipc02G0004900 AT5G62520.1 similar to RCD one 5 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to RCD one 5;(source:Araport11) Ipc02G0004910 AT4G38900.3 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc02G0004920 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0004930 AT1G23710.1 Protein of unknown function (DUF1645) 0 hypothetical protein (DUF1645);(source:Araport11) Ipc02G0004940 AT3G23000.1 CBL-interacting protein kinase 7 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 7;(source:Araport11) Ipc02G0004950 AT5G62790.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype. 1-deoxy-D-xylulose 5-phosphate reductoisomerase;(source:Araport11) Ipc02G0004960 AT5G62810.1 peroxin 14 mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2) The mRNA is cell-to-cell mobile. peroxin 14;(source:Araport11) Ipc02G0004970 AT1G50140.5 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0004980 AT1G18340.1 basal transcription factor complex subunit-related 0 basal transcription factor complex subunit-like protein;(source:Araport11) Ipc02G0004990 AT2G36330.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc02G0005000 AT3G47990.1 SUGAR-INSENSITIVE 3 0 SUGAR-INSENSITIVE 3;(source:Araport11) Ipc02G0005010 AT5G62840.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc02G0005020 AT5G51970.2 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc02G0005030 AT3G45740.1 hydrolase family protein / HAD-superfamily protein 0 hydrolase family protein / HAD-superfamily protein;(source:Araport11) Ipc02G0005040 AT5G60030.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0005050 AT5G50000.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0005060 AT3G48030.2 0 Mitochondria localized, hypoxia induced gene similar to rice HIGD. hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0005070 AT5G63480.2 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc02G0005080 AT5G60140.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc02G0005090 AT5G14895.1 0 0 NHL domain protein;(source:Araport11) Ipc02G0005100 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc02G0005110 AT5G40250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0005120 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0005130 AT3G48050.2 BAH domain ;TFIIS helical bundle-like domain Encodes a large protein with N-terminal bromo-adjacent homology (BAH) and transcription elongation factor S-II (TFS2N) domains and two C-terminal GW (glycine and tryptophan) repeats. It is nuclear and colocalizes with the processing-body component DCP1 in the cytoplasm. SOU is a component of the miRNA pathway and is involved in translational repression. protein SUO;(source:Araport11) Ipc02G0005140 AT4G14180.1 putative recombination initiation defect 1 Encodes a protein that is involved in meiotic recombination and is required for meiotic double strand break repair. putative recombination initiation defect 1;(source:Araport11) Ipc13G0009760 AT1G58030.1 cationic amino acid transporter 2 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast. cationic amino acid transporter 2;(source:Araport11) Ipc13G0009770 AT5G17790.1 zinc finger (Ran-binding) family protein Encodes a zinc-finger motif containing protein that is essential for chloroplast RNA editing. The protein physically interacts with ORRM1 and other components of chloroplast editosomes. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells. zinc finger (Ran-binding) family protein;(source:Araport11) Ipc13G0009780 AT5G17770.1 NADH:cytochrome B5 reductase 1 Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor. NADH:cytochrome B5 reductase 1;(source:Araport11) Ipc13G0009790 AT3G45400.1 exostosin family protein 0 exostosin family protein;(source:Araport11) Ipc13G0009800 AT3G03773.1 HSP20-like chaperones superfamily protein Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem. It can be phosphorylated in vitro by human and maize CK2. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0009810 AT2G39220.1 PATATIN-like protein 6 0 PATATIN-like protein 6;(source:Araport11) Ipc13G0009820 AT1G54385.3 0 At1G54385 encodes the plant KASH protein SINE1; SINE1 interacts with SUN1 and SUN2, is colocalized with F-actin, and is localized at the nuclear envelope. ARM repeat superfamily protein;(source:Araport11) Ipc13G0009830 AT5G18210.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0009840 AT3G03980.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0009850 AT1G55520.4 0 TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex. TATA binding protein 2;(source:Araport11) Ipc13G0009860 AT5G17070.2 0 Encodes a PP4R2 domain protein that likely functions as a regulatory subunit of PP4, a highly conserved ser/thr protein phosphatase. serine/threonine-protein phosphatase 4 regulatory subunit-like protein;(source:Araport11) Ipc13G0009870 AT3G10240.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0009880 AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein 0 transcription regulator NOT2/NOT3/NOT5 family protein;(source:Araport11) Ipc13G0009890 AT1G64760.2 O-Glycosyl hydrolases family 17 protein ZERZAUST is an atypical β-1,3 glucanase. The protein is localized to punctate regions of the apoplast, near cellular junctions. Mutants display aberrant floral morphology and twisted siliques and stems. Biochemcial analysis of mutant cell wall composition indicates cell wall defects. O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc13G0009900 AT1G64760.2 O-Glycosyl hydrolases family 17 protein ZERZAUST is an atypical β-1,3 glucanase. The protein is localized to punctate regions of the apoplast, near cellular junctions. Mutants display aberrant floral morphology and twisted siliques and stems. Biochemcial analysis of mutant cell wall composition indicates cell wall defects. O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc13G0009910 AT1G43190.2 polypyrimidine tract-binding protein 3 0 polypyrimidine tract-binding protein 3;(source:Araport11) Ipc13G0009920 AT1G08570.1 atypical CYS HIS rich thioredoxin 4 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. The mRNA is cell-to-cell mobile. atypical CYS HIS rich thioredoxin 4;(source:Araport11) Ipc13G0009930 AT1G09230.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0009940 AT5G18270.1 Arabidopsis NAC domain containing protein 87 0 NAC domain containing protein 87;(source:Araport11) Ipc13G0009950 AT2G39050.1 hydroxyproline-rich glycoprotein family protein Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0009960 AT3G04090.1 small and basic intrinsic protein 1A Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER. small and basic intrinsic protein 1A;(source:Araport11) Ipc13G0009970 AT3G17590.1 transcription regulatory protein SNF5, putative (BSH) Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes. transcription regulatory protein SNF5, putative (BSH);(source:Araport11) Ipc13G0009980 AT3G03710.1 polyribonucleotide nucleotidyltransferase, putative Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings. polyribonucleotide nucleotidyltransferase;(source:Araport11) Ipc13G0009990 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc13G0010000 AT3G03690.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc13G0010010 AT2G40935.9 0 0 PLAC8 family protein;(source:Araport11) Ipc13G0010020 AT3G56850.1 ABA-responsive element binding protein 3 Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation. ABA-responsive element binding protein 3;(source:Araport11) Ipc13G0010030 AT5G13750.1 zinc induced facilitator-like 1 0 zinc induced facilitator-like 1;(source:Araport11) Ipc13G0010040 AT3G56820.1 0 0 RmlC-type cupin;(source:Araport11) Ipc13G0010050 AT4G11670.1 Protein of unknown function (DUF810) 0 DNA topoisomerase 4 subunit B (DUF810);(source:Araport11) Ipc13G0010060 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0010070 AT5G63960.1 DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases Encodes the catalytic subunits of DNA polymerase δ, which is involved in the deposition of epigenetic marks. DNA polymerase delta subunit 1;(source:Araport11) Ipc13G0010080 AT5G17710.2 Co-chaperone GrpE family protein Chloroplast GrpE protein involved in chloroplastic response to heat stress and the correct oligomerization of the photosynthesis-related LHCII complex. Co-chaperone GrpE family protein;(source:Araport11) Ipc13G0010090 AT5G17910.3 0 0 cardiomyopathy-associated protein;(source:Araport11) Ipc13G0010100 AT5G21090.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0010110 AT3G43810.1 calmodulin 7 EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant. calmodulin 7;(source:Araport11) Ipc13G0010120 AT5G05080.4 0 0 ubiquitin-conjugating enzyme 22;(source:Araport11) Ipc13G0010130 AT2G27020.1 20S proteasome alpha subunit G1 Encodes 20S proteasome alpha 7 subunit PAG1. 20S proteasome alpha subunit G1;(source:Araport11) Ipc13G0010140 AT3G56950.1 small and basic intrinsic protein 2;1 One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER. Probably involved in the alleviation of ER stress; the lack of SIP2;1 reduces both pollen germination and pollen tube elongation. small and basic intrinsic protein 2;(source:Araport11) Ipc13G0010150 AT5G05070.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc13G0010160 AT1G73100.1 SU(VAR)3-9 homolog 3 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein;(source:Araport11) Ipc13G0010170 AT4G10550.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc13G0010180 AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc13G0010190 AT3G56910.1 plastid-specific 50S ribosomal protein 5 Encodes PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5). Functions in plastid translation. plastid-specific 50S ribosomal protein 5;(source:Araport11) Ipc13G0010200 AT1G08700.1 Presenilin-1 Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation. Located in intracellular membrane compartments. Presenilin-1;(source:Araport11) Ipc13G0010210 AT3G56900.1 Transducin/WD40 repeat-like superfamily protein Encodes ALADIN, a component of the nuclear pore complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0010220 AT1G72050.2 transcription factor IIIA Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm. transcription factor IIIA;(source:Araport11) Ipc13G0010230 AT2G36760.1 UDP-glucosyl transferase 73C2 0 UDP-glucosyl transferase 73C2;(source:Araport11) Ipc13G0010240 AT1G79590.3 0 Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. syntaxin of plants 52;(source:Araport11) Ipc13G0010250 AT3G56880.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc13G0010260 AT1G62640.2 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein synthase III (KAS III) 3-ketoacyl-acyl carrier protein synthase III;(source:Araport11) Ipc13G0010270 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc13G0010280 AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein 0 Nascent polypeptide-associated complex (NAC), alpha subunit family protein;(source:Araport11) Ipc13G0010290 AT1G65440.2 global transcription factor group B1 Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly. It encodes a putative WG/GW-repeat protein involved in the regulation of apical-basal polarity of embryo global transcription factor group B1;(source:Araport11) Ipc13G0010300 AT3G56590.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0010310 AT2G40840.1 disproportionating enzyme 2 Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose. The mRNA is cell-to-cell mobile. disproportionating enzyme 2;(source:Araport11) Ipc13G0010320 AT2G40840.1 disproportionating enzyme 2 Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose. The mRNA is cell-to-cell mobile. disproportionating enzyme 2;(source:Araport11) Ipc13G0010330 AT2G40840.1 disproportionating enzyme 2 Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose. The mRNA is cell-to-cell mobile. disproportionating enzyme 2;(source:Araport11) Ipc13G0010340 AT2G40850.1 phosphoinositide 4-kinase gamma 1 0 phosphoinositide 4-kinase gamma 1;(source:Araport11) Ipc13G0010350 #N/A #N/A #N/A #N/A Ipc13G0010360 AT3G29160.2 SNF1 kinase homolog 11 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. SNF1 kinase homolog 11;(source:Araport11) Ipc13G0010370 AT2G40860.1 protein kinase family protein / protein phosphatase 2C ( PP2C) family protein 0 protein kinase family protein / protein phosphatase 2C ( PP2C) family protein;(source:Araport11) Ipc13G0010380 AT2G40890.1 cytochrome P450, family 98, subfamily A, polypeptide 3 encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. cytochrome P450, family 98, subfamily A, polypeptide 3;(source:Araport11) Ipc13G0010390 AT5G07050.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc13G0010400 AT1G68570.1 Major facilitator superfamily protein NPF3.1 is a membrane localized GA transporter that is expressed in the root endodermis. Major facilitator superfamily protein;(source:Araport11) Ipc13G0010410 AT3G56640.1 exocyst complex component sec15A Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. exocyst complex component sec15A;(source:Araport11) Ipc13G0010420 AT2G40950.1 Basic-leucine zipper (bZIP) transcription factor family protein bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment. It is cleaved by S2P to allow translocation to the nucleus. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0010430 AT2G40960.2 0 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc13G0010440 AT3G10760.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc13G0010450 AT3G56690.1 Cam interacting protein 111 encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined. Cam interacting protein 111;(source:Araport11) Ipc13G0010460 AT2G40820.2 0 0 stomatal closure actin-binding-like protein;(source:Araport11) Ipc13G0010470 AT5G12250.1 beta-6 tubulin Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment. beta-6 tubulin;(source:Araport11) Ipc13G0010480 AT1G34180.1 NAC domain containing protein 16 0 NAC domain containing protein 16;(source:Araport11) Ipc13G0010490 AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0010500 AT3G10820.1 Transcription elongation factor (TFIIS) family protein 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc13G0010510 AT1G52990.2 0 0 thioredoxin family protein;(source:Araport11) Ipc13G0010520 AT5G60770.1 nitrate transporter 2.4 member of High affinity nitrate transporter family nitrate transporter 2.4;(source:Araport11) Ipc13G0010530 AT5G05140.1 Transcription elongation factor (TFIIS) family protein 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc13G0010540 AT5G05130.1 DNA/RNA helicase protein 0 DNA/RNA helicase protein;(source:Araport11) Ipc13G0010550 AT1G28110.2 serine carboxypeptidase-like 45 0 serine carboxypeptidase-like 45;(source:Araport11) Ipc13G0010560 AT1G05320.6 0 0 myosin heavy chain, embryonic smooth protein;(source:Araport11) Ipc13G0010570 #N/A #N/A #N/A #N/A Ipc13G0010580 AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0010590 AT2G41330.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc13G0010600 AT5G05260.2 0 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc13G0010610 AT5G05260.2 0 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc13G0010620 AT3G57090.2 0 Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0010630 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc13G0010640 AT3G10210.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc13G0010650 AT5G19400.5 0 Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality. Telomerase activating protein Est1;(source:Araport11) Ipc13G0010660 AT3G56960.2 0 Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. phosphatidyl inositol monophosphate 5 kinase 4;(source:Araport11) Ipc13G0010670 AT2G41190.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc13G0010680 AT2G41190.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc13G0010690 AT3G12600.1 nudix hydrolase homolog 16 0 nudix hydrolase homolog 16;(source:Araport11) Ipc13G0010700 AT3G56710.2 0 Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts. sigma factor binding protein 1;(source:Araport11) Ipc13G0010710 AT5G03415.1 Transcription factor DP Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. Transcription factor DP;(source:Araport11) Ipc13G0010720 AT3G12250.7 0 basic leucine zipper transcription factor involved in the activation of SA-responsive genes. TGACG motif-binding factor 6;(source:Araport11) Ipc13G0010730 AT1G24764.1 microtubule-associated proteins 70-2 Member of the MAP70 protein family. microtubule-associated proteins 70-2;(source:Araport11) Ipc13G0010740 AT1G68560.1 alpha-xylosidase 1 Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. alpha-xylosidase 1;(source:Araport11) Ipc13G0010750 AT2G47830.1 Cation efflux family protein 0 Cation efflux family protein;(source:Araport11) Ipc13G0010760 AT2G17030.1 F-box family protein with a domain of unknown function (DUF295) Encodes a SKP1/ASK-interacting protein. F-box SKIP23-like protein (DUF295);(source:Araport11) Ipc13G0010770 AT5G64620.1 cell wall / vacuolar inhibitor of fructosidase 2 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. cell wall / vacuolar inhibitor of fructosidase 2;(source:Araport11) Ipc13G0010780 AT1G80270.5 0 0 PENTATRICOPEPTIDE REPEAT 596;(source:Araport11) Ipc13G0010790 AT1G80270.5 0 0 PENTATRICOPEPTIDE REPEAT 596;(source:Araport11) Ipc13G0010800 AT3G56720.2 0 0 pre-mRNA-splicing factor;(source:Araport11) Ipc13G0010810 AT4G38400.1 expansin-like A2 member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin-like A2;(source:Araport11) Ipc13G0010820 AT3G45960.1 expansin-like A3 member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin-like A3;(source:Araport11) Ipc13G0010830 AT3G56750.1 0 0 plant/protein;(source:Araport11) Ipc13G0010840 AT3G03990.1 alpha/beta-Hydrolases superfamily protein Encodes an alpha/beta hydrolase essential for strigolactone signaling. Degradation of the protein is promoted by strigolactone. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0010850 AT3G55290.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0010860 AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0010870 AT3G57050.1 cystathionine beta-lyase Encodes second enzyme in the methionine biosynthetic pathway cystathionine beta-lyase;(source:Araport11) Ipc13G0010880 AT5G14850.1 Alg9-like mannosyltransferase family Encodes a putative mannosyltransferase homolog to human PIG-B and yeast GPI10, both of which are involved in the biosynthesis of glycosylphosphatidylinositol (GPI) anchors. Disruption of the gene affects COBRA-LIKE10 localization, a GPI-anchored protein (GPI-AP) important for pollen tube growth and guidance. Alg9-like mannosyltransferase family;(source:Araport11) Ipc13G0010890 AT3G10250.5 0 0 histidine-tRNA ligase;(source:Araport11) Ipc13G0010900 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc13G0010910 AT3G57030.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc13G0010920 AT2G41250.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc13G0010930 AT3G56990.1 embryo sac development arrest 7 0 embryo sac development arrest 7;(source:Araport11) Ipc13G0010940 AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a member of the basic helix-loop-helix transcription factor family protein. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0010950 AT3G10190.1 Calcium-binding EF-hand family protein Encodes a protein with sequence similarity to calmodulins. Loss of function mutations have decreased response to chitin elicitors suggesting a role in plant response to fungal pathogens. Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0010960 AT5G04040.2 0 Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. Patatin-like phospholipase family protein;(source:Araport11) Ipc13G0010970 AT2G41430.5 dehydration-induced protein (ERD15) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2. dehydration-induced protein (ERD15);(source:Araport11) Ipc13G0010980 AT4G28360.1 Ribosomal protein L22p/L17e family protein 0 Ribosomal protein L22p/L17e family protein;(source:Araport11) Ipc13G0010990 AT3G57200.1 0 0 glycosyltransferase-like protein;(source:Araport11) Ipc13G0011000 AT3G46940.2 0 0 DUTP-PYROPHOSPHATASE-LIKE 1;(source:Araport11) Ipc13G0011010 AT5G03990.1 0 0 FK506-binding-like protein;(source:Araport11) Ipc13G0011020 AT5G03960.3 0 0 IQ-domain 12;(source:Araport11) Ipc13G0011030 AT3G57240.1 beta-1,3-glucanase 3 encodes a member of glycosyl hydrolase family 17 beta-1,3-glucanase 3;(source:Araport11) Ipc13G0011040 AT2G41510.1 cytokinin oxidase/dehydrogenase 1 It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 1;(source:Araport11) Ipc13G0011050 #N/A #N/A #N/A #N/A Ipc13G0011060 AT3G57330.1 autoinhibited Ca2+-ATPase 11 Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate) autoinhibited Ca2+-ATPase 11;(source:Araport11) Ipc13G0011070 AT3G47600.2 0 Encodes a putative transcription factor (MYB94). myb domain protein 94;(source:Araport11) Ipc13G0011080 AT1G17130.1 Family of unknown function (DUF572) DUF572 domain protein involved in alternative splicing. coiled-coil protein (DUF572);(source:Araport11) Ipc13G0011090 AT2G15490.1 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc13G0011100 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0011110 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0011120 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0011130 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0011140 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0011150 AT2G15490.1 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc13G0011160 AT4G23540.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0011170 AT3G57400.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0011180 AT2G41740.2 0 Encodes a protein with high homology to animal villin. villin 2;(source:Araport11) Ipc13G0011190 AT2G41760.1 0 Controls the expression of specific defence-response genes, activates the synthesis pathway for the phytoalexin camalexin and influences basal resistance to Pseudomonas syringae pv tomato (Pst). amino-terminal glutamine amidohydrolase;(source:Araport11) Ipc13G0011200 AT4G35910.1 Adenine nucleotide alpha hydrolases-like superfamily protein Encodes a cytoplasmic thiouridylase that is essential for tRNA thiolation. Its activity appears to be important in root development. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc13G0011210 AT1G60080.1 3'-5'-exoribonuclease family protein 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc13G0011220 AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH);(source:Araport11) Ipc13G0011230 AT2G41820.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0011240 AT1G01170.2 Protein of unknown function (DUF1138) 0 ozone-responsive stress-like protein (DUF1138);(source:Araport11) Ipc13G0011250 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc13G0011260 AT3G21280.1 ubiquitin-specific protease 7 Encodes a ubiquitin-specific protease. ubiquitin carboxyl-terminal hydrolase;(source:Araport11) Ipc13G0011270 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc13G0011280 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0011290 AT3G57520.1 seed imbibition 2 SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2. seed imbibition 2;(source:Araport11) Ipc13G0011300 AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc13G0011310 AT5G12480.1 calmodulin-domain protein kinase 7 calmodulin-domain protein kinase CDPK isoform 7 (CPK7) calmodulin-domain protein kinase 7;(source:Araport11) Ipc13G0011320 AT3G57540.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc13G0011330 AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein 0 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein;(source:Araport11) Ipc13G0011340 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc13G0011350 AT5G52630.1 mitochondrial RNAediting factor 1 Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes. mitochondrial RNAediting factor 1;(source:Araport11) Ipc13G0011360 AT5G48540.1 receptor-like protein kinase-related family protein 0 receptor-like protein kinase-related family protein;(source:Araport11) Ipc13G0011370 AT3G57570.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0011380 AT3G57630.3 0 Encodes a glycoprotein glycosyl transferase ExAD. Knockout mutants show truncated root hair phenotype. exostosin family protein;(source:Araport11) Ipc13G0011390 AT3G57650.1 lysophosphatidyl acyltransferase 2 Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity. lysophosphatidyl acyltransferase 2;(source:Araport11) Ipc13G0011400 AT3G57670.1 C2H2-type zinc finger family protein Encodes a a C2H2/C2HC zinc finger transcription factor specifically expressed in the transmitting tract and involved in transmitting tract development and pollen tube growth.Acts redundantly with WIP4 and WIP5 to determine distal cell fate in the root. MP binds to regulatory elements within the NTT locus and likely regulates its expression. C2H2-type zinc finger family protein;(source:Araport11) Ipc13G0011410 AT3G57680.1 Peptidase S41 family protein 0 Peptidase S41 family protein;(source:Araport11) Ipc13G0011420 AT3G20860.1 NIMA-related kinase 5 Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. Serine/Threonine kinase catalytic domain protein;(source:Araport11) Ipc13G0011430 AT3G12170.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc13G0011440 AT5G06940.1 Leucine-rich repeat receptor-like protein kinase family protein 0 Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc13G0011450 AT3G57785.1 0 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein;(source:Araport11) Ipc13G0011460 AT3G57800.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0011470 AT5G06850.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Encodes an endoplasmic reticulum protein that is involved in the transport of the florigen FT from companion cells to sieve elements, thus affecting FT transport through the phloem to the SAM. C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc13G0011480 AT5G06839.3 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc13G0011490 AT3G57880.4 0 Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region. Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc13G0011500 AT2G42220.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc13G0011510 AT5G06830.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0011520 AT3G57930.2 0 0 rho GTPase-activating gacO-like protein;(source:Araport11) Ipc13G0011530 AT1G07630.1 pol-like 5 Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. pol-like 5;(source:Araport11) Ipc13G0011540 AT3G57950.1 0 0 cotton fiber protein;(source:Araport11) Ipc13G0011550 AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein;(source:Araport11) Ipc13G0011560 AT5G19630.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0011570 AT3G57980.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc13G0011580 AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein KHZ2 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ1.Double mutants with khz1 are late flowering. Overexpression leads to increased rates of leaf senescence. KH domain-containing protein / zinc finger (CCCH type) family protein;(source:Araport11) Ipc13G0011590 AT3G12120.2 fatty acid desaturase 2 Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. fatty acid desaturase 2;(source:Araport11) Ipc13G0011600 AT3G58000.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc13G0011610 AT2G42140.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc13G0011620 AT3G53750.2 0 Member of the Actin gene family. Expressed in mature pollen. actin 3;(source:Araport11) Ipc13G0011630 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0011640 AT5G39120.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0011650 AT5G39120.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0011660 AT5G39110.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0011670 AT2G42120.2 DNA polymerase delta small subunit 0 DNA polymerase delta small subunit;(source:Araport11) Ipc13G0011680 AT3G58030.4 RING/U-box superfamily protein Encodes a RING domain E3 ligase. Has overlapping function with MUSE2 in the negative regulation of defence responses. SIKIC2 (and possibly SIKIC1 and 3) is ubiquination target. RING/U-box superfamily protein;(source:Araport11) Ipc13G0011690 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0011700 AT3G58040.3 0 Encodes a RING finger domain containing protein that interacts with AtRAP2.2 and interacts with ATG6, MUSE13/14 resulting in ubiquitination of ATG6.The mRNA is cell-to-cell mobile. seven in absentia of Arabidopsis 2;(source:Araport11) Ipc13G0011710 AT3G58530.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc13G0011720 AT3G58560.1 DNAse I-like superfamily protein Encodes a protein that is involved in mRNA processing and localized to cytoplasmic p-bodies. Double mutants with CCR4b show decreased sensitivity to high concentrations of sucrose. Involved in starch and sucrose metabolism. DNAse I-like superfamily protein;(source:Araport11) Ipc13G0011730 AT1G57860.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc13G0011740 AT2G41945.1 0 Encodes a novel protein found only in plants. RED1 has two isoforms RED1.1 and RED1.2. It is localized to the nucleus. Loss of function mutants are embryo lethal but can be rescued before desiccation by embryo culture. transmembrane protein;(source:Araport11) Ipc13G0011750 AT2G41940.1 zinc finger protein 8 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 8;(source:Araport11) Ipc13G0011760 AT5G06660.1 Protein of unknown function DUF106, transmembrane 0 transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane);(source:Araport11) Ipc13G0011770 AT3G58490.1 Phosphatidic acid phosphatase (PAP2) family protein Encodes a long-chain base 1-phosphate (LCBP) phosphatase that is expressed in the endoplasmic reticulum. Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc13G0011780 AT3G11980.1 Jojoba acyl CoA reductase-related male sterility protein Similar to fatty acid reductases. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc13G0011790 AT5G06610.1 Protein of unknown function (DUF620) DUF620 domain protein. In xylem cells BRD1 is expressed in the secondary wall pit boundaries. BRD1 interacts with and appears to be necessary to recruit WALLIN to the plasma membrane. lipase (DUF620);(source:Araport11) Ipc13G0011800 AT1G15670.1 Galactose oxidase/kelch repeat superfamily protein Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB1, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc13G0011810 AT4G32350.3 0 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc13G0011820 AT3G23610.5 0 Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding. dual specificity protein phosphatase 1;(source:Araport11) Ipc13G0011830 AT5G03500.6 0 Encodes together with its paralog MED7A a subunit of the middle module of the transcriptional co-regulator Mediator complex. Regulates genes required for normal development of etiolated seedlings. Mediator complex, subunit Med7;(source:Araport11) Ipc13G0011840 AT3G58480.1 calmodulin-binding family protein 0 calmodulin-binding family protein;(source:Araport11) Ipc13G0011850 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc13G0011860 AT3G03860.1 APR-like 5 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. The mRNA is cell-to-cell mobile. APR-like 5;(source:Araport11) Ipc13G0011870 AT5G18130.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0011880 AT3G03890.1 FMN binding 0 FMN binding protein;(source:Araport11) Ipc13G0011890 AT5G18150.1 Methyltransferase-related protein 0 Methyltransferase-related protein;(source:Araport11) Ipc13G0011900 AT5G18170.1 glutamate dehydrogenase 1 Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 1;(source:Araport11) Ipc13G0011910 AT3G54720.1 Peptidase M28 family protein Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1. Peptidase M28 family protein;(source:Araport11) Ipc13G0011920 AT3G11890.7 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc13G0011930 #N/A #N/A #N/A #N/A Ipc13G0011940 AT5G06560.1 Protein of unknown function, DUF593 0 myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc13G0011950 AT3G20730.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 PPR superfamily protein;(source:Araport11) Ipc13G0011960 AT3G54750.2 0 0 downstream neighbor of Son;(source:Araport11) Ipc13G0011970 AT2G38910.1 calcium-dependent protein kinase 20 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 20;(source:Araport11) Ipc13G0011980 AT5G46970.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc13G0011990 AT3G52360.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0012000 AT1G74390.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0012010 AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0012020 AT3G11690.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0012030 AT5G22000.3 RING-H2 group F2A encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. RING-H2 group F2A;(source:Araport11) Ipc13G0012040 AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor 0 FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11) Ipc13G0012050 AT2G35880.3 0 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc13G0012060 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0012070 AT3G10660.2 0 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2;(source:Araport11) Ipc13G0012080 AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein 0 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein;(source:Araport11) Ipc13G0012090 #N/A #N/A #N/A #N/A Ipc13G0012100 AT1G52620.1 Pentatricopeptide repeat (PPR) superfamily protein Mitochondrial pentatricopeptide repeat protein required for stabilizing nad1 transcripts. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0012110 AT2G23690.1 0 0 HTH-type transcriptional regulator;(source:Araport11) Ipc13G0012120 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0012130 AT3G44150.1 0 0 Expp1 protein;(source:Araport11) Ipc13G0012140 AT3G02920.1 Replication protein A, subunit RPA32 0 Replication protein A, subunit RPA32;(source:Araport11) Ipc13G0012150 AT5G06510.6 0 0 nuclear factor Y, subunit A10;(source:Araport11) Ipc13G0012160 AT3G52390.1 TatD related DNase 0 TatD related DNase;(source:Araport11) Ipc13G0012170 AT3G11820.2 syntaxin of plants 121 Encodes a syntaxin localized at the plasma membrane. SYR1/PEN1 is a member of the SNARE superfamily and functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew. It is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. The syp121 point mutation results in stomatal phenotypes that reduce CO2 assimilation, slow vegetative growth and increase water use efficiency in the whole plant, conditional upon high light intensities and low relative humidity. The R20R21 motif of SYP121 are essential for SEC11 interaction. Mutation of the R20R21 motif blocks vesicle traffic without uncoupling the effects of SYP121 on solute and K+ uptake associated with the F9xRF motif; the mutation also mimicks the effects on traffic block observed on coexpression of the dominant negative SEC11?149 fragment. syntaxin of plants 121;(source:Araport11) Ipc13G0012180 AT5G16280.1 Tetratricopeptide repeat (TPR)-like superfamily protein Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0012190 AT2G35920.3 0 0 RNA helicase family protein;(source:Araport11) Ipc13G0012200 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc13G0012210 AT3G05675.3 0 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc13G0012220 AT2G35940.3 BEL1-like homeodomain 1 Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. BEL1-like homeodomain 1;(source:Araport11) Ipc13G0012230 AT4G31480.9 0 0 Coatomer, beta subunit;(source:Araport11) Ipc13G0012240 AT3G11660.1 NDR1/HIN1-like 1 encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive. NDR1/HIN1-like 1;(source:Araport11) Ipc13G0012250 AT1G63780.1 Ribosomal RNA processing Brix domain protein Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies. Ribosomal RNA processing Brix domain protein;(source:Araport11) Ipc13G0012260 AT5G06300.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) Ipc13G0012270 AT5G06290.1 2-cysteine peroxiredoxin B Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues. The mRNA is cell-to-cell mobile. 2-cysteine peroxiredoxin B;(source:Araport11) Ipc13G0012280 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0012290 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc13G0012300 AT5G06260.1 TLD-domain containing nucleolar protein 0 TLD-domain containing nucleolar protein;(source:Araport11) Ipc13G0012310 AT5G04800.4 Ribosomal S17 family protein 0 Ribosomal S17 family protein;(source:Araport11) Ipc13G0012320 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0012330 AT3G11590.1 0 0 golgin family A protein;(source:Araport11) Ipc13G0012340 AT1G43690.1 ubiquitin interaction motif-containing protein 0 ubiquitin interaction motif-containing protein;(source:Araport11) Ipc13G0012350 AT2G24280.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0012360 AT2G16676.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc13G0012370 AT5G22860.8 0 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc13G0012380 AT5G06250.5 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0012390 AT3G11560.4 LETM1-like protein 0 LETM1-like protein;(source:Araport11) Ipc13G0012400 AT1G08370.1 decapping 1 Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2. decapping 1;(source:Araport11) Ipc13G0012410 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc13G0012420 AT5G06140.1 sorting nexin 1 Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1. sorting nexin 1;(source:Araport11) Ipc13G0012430 AT2G36145.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0012440 AT3G52570.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0012450 AT2G03370.1 Glycosyltransferase family 61 protein 0 O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase-like protein;(source:Araport11) Ipc13G0012460 AT3G52580.1 Ribosomal protein S11 family protein 0 Ribosomal protein S11 family protein;(source:Araport11) Ipc13G0012470 AT2G36200.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0012480 AT2G36210.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0012490 AT3G10770.1 Single-stranded nucleic acid binding R3H protein 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc13G0012500 AT3G27890.1 NADPH:quinone oxidoreductase Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay. NADPH:quinone oxidoreductase;(source:Araport11) Ipc13G0012510 AT1G16740.1 Ribosomal protein L20 0 Ribosomal protein L20;(source:Araport11) Ipc13G0012520 AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein Encodes a mitochondrial protein essential for the splicing of group II introns in two mitochondrial genes for which splicing factors had not previously been identified: rpl2 and ccmFc. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc13G0012530 AT3G60840.1 microtubule-associated protein 65-4 Encodes MAP65-4, a non-motor microtubule associated protein (MAP) that belongs to the evolutionarily conserved MAP65 family. MAP65-4 specifically associates with the forming mitotic spindle during prophase and with the kinetochore fibers from prometaphase to the end of anaphase. MAP65-4 cross-links microtubules and promotes microtubule bundle elongation. microtubule-associated protein 65-4;(source:Araport11) Ipc13G0012540 AT2G23930.1 probable small nuclear ribonucleoprotein G 0 Putative small nuclear ribonucleoprotein G;(source:Araport11) Ipc13G0012550 AT5G22400.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc13G0012560 AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit;(source:Araport11) Ipc13G0012570 AT3G52660.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0012580 AT1G57790.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc13G0012590 AT5G03870.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc13G0012600 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0012610 AT3G52720.4 0 Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast. Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding, ER export, trafficking and activity of the protein. alpha carbonic anhydrase 1;(source:Araport11) Ipc13G0012620 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0012630 AT4G02390.3 0 Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification . poly(ADP-ribose) polymerase;(source:Araport11) Ipc13G0012640 AT3G04030.3 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc13G0012650 AT1G08360.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc13G0012660 AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein 0 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein;(source:Araport11) Ipc13G0012680 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc13G0012670 AT3G17270.1 F-box family protein 0 F-box/associated interaction domain protein;(source:Araport11) Ipc13G0012690 AT2G36270.2 0 Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages. Responsible for reducing cadmium uptake, mediated by interaction with MYB49 . Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0012700 AT3G23630.1 isopentenyltransferase 7 Encodes an isopentenyl transferase involved in cytokinin biosynthesis. isopentenyltransferase 7;(source:Araport11) Ipc13G0012710 AT2G36290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0012720 AT2G36290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0012730 AT3G48410.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0012740 AT2G07705.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0012750 AT5G08030.1 PLC-like phosphodiesterases superfamily protein Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc13G0012760 AT3G52820.1 purple acid phosphatase 22 0 purple acid phosphatase 22;(source:Araport11) Ipc13G0012770 AT3G52820.1 purple acid phosphatase 22 0 purple acid phosphatase 22;(source:Araport11) Ipc13G0012780 AT2G36320.1 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc13G0012790 AT3G59340.4 0 0 solute carrier family 35 protein (DUF914);(source:Araport11) Ipc13G0012800 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0012810 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc13G0012820 AT1G19485.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0012830 AT1G19490.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0012840 AT3G52890.4 0 KCBP-interacting protein kinase interacts specifically with the tail region of KCBP KCBP-interacting protein kinase;(source:Araport11) Ipc13G0012850 AT3G09970.1 Calcineurin-like metallo-phosphoesterase superfamily protein Encodes a cytosolic tyrosine phosphatase. Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc13G0012860 AT3G52910.1 growth-regulating factor 4 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 4;(source:Araport11) Ipc13G0012870 AT2G36410.1 Family of unknown function (DUF662) 0 transcriptional activator (DUF662);(source:Araport11) Ipc13G0012880 AT5G03670.1 0 0 histone-lysine N-methyltransferase SETD1B-like protein;(source:Araport11) Ipc13G0012890 AT2G36430.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc13G0012900 AT3G02570.1 Mannose-6-phosphate isomerase, type I Encodes a protein with phosphomannose isomerase activity. Mannose-6-phosphate isomerase, type I;(source:Araport11) Ipc13G0012910 AT2G36450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc13G0012920 AT5G03680.1 Duplicated homeodomain-like superfamily protein Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc13G0012930 AT2G36460.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc13G0012940 AT3G12400.1 Ubiquitin-conjugating enzyme/RWD-like protein Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome. Ubiquitin-conjugating enzyme/RWD-like protein;(source:Araport11) Ipc13G0012950 AT2G27770.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc13G0012960 AT3G44735.2 PHYTOSULFOKINE 3 PRECURSOR Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. PHYTOSULFOKINE 3 PRECURSOR;(source:Araport11) Ipc13G0012970 AT3G23620.1 Ribosomal RNA processing Brix domain protein BRIX domain containing protein, similar to RNA biogenesis factors in yeast. Binds rRNA and likely also functions in RNA biogenesis in Arabidopsis. Essential gene, mutants are embryo lethal and does not transmit well through the gametophyte. Ribosomal RNA processing Brix domain protein;(source:Araport11) Ipc13G0012980 AT2G36490.1 demeter-like 1 A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts. The ros1 mutant is more susceptible to biotrophic pathogens and is repressed in its responsiveness of salyclic acid-dependent defence genes. demeter-like 1;(source:Araport11) Ipc13G0012990 #N/A #N/A #N/A #N/A Ipc13G0013000 AT3G52940.1 Ergosterol biosynthesis ERG4/ERG24 family Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo. Ergosterol biosynthesis ERG4/ERG24 family;(source:Araport11) Ipc13G0013010 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc13G0013020 AT1G09970.1 Leucine-rich receptor-like protein kinase family protein RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc13G0013030 AT5G04550.2 0 0 type-1 restriction enzyme mjaxp r protein (DUF668);(source:Araport11) Ipc13G0013040 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc13G0013050 AT1G33730.2 0 0 cytochrome P450, family 76, subfamily C, polypeptide 5;(source:Araport11) Ipc13G0013060 AT3G26220.1 cytochrome P450, family 71, subfamily B, polypeptide 3 cytochrome P450 monooxygenase cytochrome P450, family 71, subfamily B, polypeptide 3;(source:Araport11) Ipc13G0013070 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0013080 AT5G03770.1 KDO transferase A Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase KDO transferase A;(source:Araport11) Ipc13G0013090 AT3G52990.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc13G0013100 AT3G10040.1 sequence-specific DNA binding transcription factors Encodes HRA1 (HYPOXIA RESPONSE ATTENUATOR1), a low oxygen-inducible transcription factor. sequence-specific DNA binding transcription factor;(source:Araport11) Ipc13G0013110 AT2G15970.1 cold regulated 413 plasma membrane 1 encodes an alpha form of a protein similar to the cold acclimation protein WCOR413 in wheat. Expression is induced by short-term cold-treatment, water deprivation, and abscisic acid treatment. The mRNA is cell-to-cell mobile. cold regulated 413 plasma membrane 1;(source:Araport11) Ipc13G0013120 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0013130 AT3G53000.1 phloem protein 2-A15 0 phloem protein 2-A15;(source:Araport11) Ipc13G0013140 AT5G03790.1 homeobox 51 Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation. homeobox 51;(source:Araport11) Ipc13G0013150 AT2G36620.1 ribosomal protein L24 RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020). ribosomal protein L24;(source:Araport11) Ipc13G0013160 AT2G36640.2 0 Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2. embryonic cell protein 63;(source:Araport11) Ipc13G0013170 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc13G0013180 AT1G17980.1 poly(A) polymerase 1 Encodes a poly(A) polymerase. Located in the nucleus. It limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4. poly(A) polymerase 1;(source:Araport11) Ipc13G0013190 AT1G31050.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0013200 AT1G15100.1 RING-H2 finger A2A Encodes a putative RING-H2 finger protein RHA2a. RING-H2 finger A2A;(source:Araport11) Ipc13G0013210 AT3G11260.1 WUSCHEL related homeobox 5 WOX5 is a member of the Wuschel (WUS) family of homeodomain transcription factors and is required for quiescent center (QC) function and columella stem cell maintenance in the root meristem. It is expressed in the QC and moves to the columella stem cells where it represses their differentiation. WOX5 binds members of the Topless family of transcriptional co-repressors. WUSCHEL related homeobox 5;(source:Araport11) Ipc13G0013220 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc13G0013230 AT2G36650.1 0 0 CHUP1-like protein;(source:Araport11) Ipc13G0013240 AT3G10060.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc13G0013250 AT1G26370.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc13G0013260 AT2G36670.2 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0013270 AT3G09410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc13G0013280 AT3G09925.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc13G0013290 AT5G03555.1 permease, cytosine/purines, uracil, thiamine, allantoin family protein Encodes PLUTO (plastidic nucleobase transporter), a member of the Nucleobase:Cation-Symporter1 protein family, capable of transporting purine and pyrimidine nucleobases. permease, cytosine/purines, uracil, thiamine, allantoin family protein;(source:Araport11) Ipc13G0013300 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc13G0013310 AT2G36720.2 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc13G0013320 AT2G36710.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0013330 AT3G53150.1 UDP-glucosyl transferase 73D1 0 UDP-glucosyl transferase 73D1;(source:Araport11) Ipc13G0013340 AT5G01550.1 lectin receptor kinase a4.1 Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. lectin receptor kinase a4.1;(source:Araport11) Ipc13G0013350 AT5G56320.2 0 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A14;(source:Araport11) Ipc13G0013360 AT5G02260.1 expansin A9 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A9;(source:Araport11) Ipc13G0013370 AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3 Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile. tetratricopetide-repeat thioredoxin-like 3;(source:Araport11) Ipc13G0013380 AT3G09920.4 0 0 phosphatidyl inositol monophosphate 5 kinase;(source:Araport11) Ipc13G0013390 AT5G03530.2 0 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes. RAB GTPase homolog C2A;(source:Araport11) Ipc13G0013400 AT3G09890.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc13G0013410 AT2G36830.1 gamma tonoplast intrinsic protein Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems. The mRNA is cell-to-cell mobile. gamma tonoplast intrinsic protein;(source:Araport11) Ipc13G0013420 AT1G63970.1 isoprenoid F Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF isoprenoid F;(source:Araport11) Ipc13G0013430 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0013440 AT3G53190.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0013450 AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.Functions redundantly with the beta subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc13G0013460 AT3G01400.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0013470 AT2G39210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0013480 AT2G39210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0013490 AT4G17330.2 0 gene of unknown function expressed in seedlings, flower buds and stems G2484-1 protein;(source:Araport11) Ipc13G0013500 AT2G39210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0013510 AT5G03460.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0013520 AT5G03455.1 Rhodanese/Cell cycle control phosphatase superfamily protein Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance. Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc13G0013530 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc13G0013540 AT5G03430.1 phosphoadenosine phosphosulfate (PAPS) reductase family protein 0 phosphoadenosine phosphosulfate (PAPS) reductase family protein;(source:Araport11) Ipc13G0013550 AT2G36880.2 methionine adenosyltransferase 3 0 methionine adenosyltransferase 3;(source:Araport11) Ipc13G0013560 AT1G26520.1 Cobalamin biosynthesis CobW-like protein 0 Cobalamin biosynthesis CobW-like protein;(source:Araport11) Ipc13G0013570 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0013580 AT1G29940.1 nuclear RNA polymerase A2 Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). nuclear RNA polymerase A2;(source:Araport11) Ipc13G0013590 AT2G36910.1 ATP binding cassette subfamily B1 Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues. The mRNA is cell-to-cell mobile. ATP binding cassette subfamily B1;(source:Araport11) Ipc13G0013600 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc13G0013610 AT2G36960.2 TSL-kinase interacting protein 1 Arabidopsis thaliana myb/SANT domain protein TSL-kinase interacting protein 1;(source:Araport11) Ipc13G0013620 AT5G17847.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0013630 AT4G03040.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0013640 AT5G38470.1 Rad23 UV excision repair protein family Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. Rad23 UV excision repair protein family;(source:Araport11) Ipc13G0013660 AT4G22720.2 Actin-like ATPase superfamily protein 0 Actin-like ATPase superfamily protein;(source:Araport11) Ipc13G0013650 AT4G22720.2 Actin-like ATPase superfamily protein 0 Actin-like ATPase superfamily protein;(source:Araport11) Ipc13G0013670 AT5G04250.2 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc13G0013680 AT3G09830.3 0 Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae. Protein kinase superfamily protein;(source:Araport11) Ipc13G0013690 AT2G37010.2 0 member of NAP subfamily non-intrinsic ABC protein 12;(source:Araport11) Ipc13G0013700 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc13G0013710 AT2G37020.3 0 0 Translin family protein;(source:Araport11) Ipc13G0013720 AT1G72650.1 TRF-like 6 Arabidopsis thaliana myb family transcription factor (At1g72650) TRF-like 6;(source:Araport11) Ipc13G0013730 AT2G37035.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0013740 AT5G03300.1 adenosine kinase 2 Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion. The mRNA is cell-to-cell mobile. adenosine kinase 2;(source:Araport11) Ipc13G0013750 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc13G0013760 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc13G0013770 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc13G0013780 AT3G16640.1 translationally controlled tumor protein Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. translationally controlled tumor protein;(source:Araport11) Ipc13G0013790 AT5G03280.1 NRAMP metal ion transporter family protein Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence. A maternally expressed imprinted gene. Mutations in ein2 block ethylene stimulation of flavonol synthesis. The mRNA is cell-to-cell mobile. NRAMP metal ion transporter family protein;(source:Araport11) Ipc13G0013800 AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0013810 AT3G05630.1 phospholipase D P2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. phospholipase D P2;(source:Araport11) Ipc13G0013820 AT1G69770.1 chromomethylase 3 Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3;(source:Araport11) Ipc13G0013830 AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0013840 AT2G37210.1 lysine decarboxylase family protein Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. lysine decarboxylase family protein;(source:Araport11) Ipc13G0013850 #N/A #N/A #N/A #N/A Ipc13G0013860 AT3G30165.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc13G0013870 AT5G03230.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc13G0013880 AT5G03210.1 0 Encodes a small polypeptide contributing to resistance to potyvirus. E3 ubiquitin-protein ligase;(source:Araport11) Ipc13G0013890 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0013900 AT1G16670.1 Protein kinase superfamily protein Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress. Protein kinase superfamily protein;(source:Araport11) Ipc13G0013910 AT3G09770.1 RING/U-box superfamily protein Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion. RING/U-box superfamily protein;(source:Araport11) Ipc13G0013920 AT3G53390.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0013930 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc13G0013940 AT5G20620.2 0 encodes a ubiquitin polyprotein. ubiquitin 4;(source:Araport11) Ipc13G0013950 AT2G42760.1 0 0 DUF1685 family protein;(source:Araport11) Ipc13G0013960 AT1G20760.1 Calcium-binding EF hand family protein EH domain containing protein. Calcium-binding EF hand family protein;(source:Araport11) Ipc13G0013970 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0013980 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0013990 AT2G37120.1 S1FA-like DNA-binding protein 0 S1FA-like DNA-binding protein;(source:Araport11) Ipc13G0014000 AT5G03110.1 0 0 protamine P1 family protein;(source:Araport11) Ipc13G0014010 AT4G20010.2 plastid transcriptionally active 9 Organellar Single-stranded DNA Binding protein. Decreases MMEJ on long ssDNA templates. plastid transcriptionally active 9;(source:Araport11) Ipc13G0014020 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0014030 AT3G52320.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0014040 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0014050 AT5G03040.3 IQ-domain 2 0 IQ-domain 2;(source:Araport11) Ipc13G0014060 AT3G53320.1 0 Encodes a microtubule-associated protein track growing microtubule plus ends. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc13G0014070 AT3G09670.2 Tudor/PWWP/MBT superfamily protein PWWP domain protein involved in regulation of FLC and flowering time. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc13G0014080 AT2G37060.3 nuclear factor Y, subunit B8 0 nuclear factor Y, subunit B8;(source:Araport11) Ipc13G0014090 AT3G09630.1 Ribosomal protein L4/L1 family 0 Ribosomal protein L4/L1 family;(source:Araport11) Ipc13G0014100 AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication Spo11/DNA topoisomerase VI, subunit A protein;(source:Araport11) Ipc13G0014110 AT2G37300.4 0 0 transmembrane protein;(source:Araport11) Ipc13G0014120 AT5G02750.1 RING/U-box superfamily protein Encodes an E3 ligase, SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing. RING/U-box superfamily protein;(source:Araport11) Ipc13G0014130 AT5G02720.2 0 0 valine-tRNA ligase;(source:Araport11) Ipc13G0014150 AT2G37330.1 aluminum sensitive 3 Encodes an ABC transporter-like protein, without an ATPase domain, required for aluminum (Al) resistance/tolerance and may function to redistribute accumulated Al away from sensitive tissues in order to protect the growing root from the toxic effects of Al. aluminum sensitive 3;(source:Araport11) Ipc13G0014140 AT3G09590.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc13G0014160 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc13G0014170 AT5G23260.2 K-box region and MADS-box transcription factor family protein Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc13G0014180 AT2G22840.1 growth-regulating factor 1 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1;(source:Araport11) Ipc13G0014190 AT1G14550.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc13G0014210 AT5G23260.2 K-box region and MADS-box transcription factor family protein Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc13G0014200 AT1G32050.1 SCAMP family protein 0 SCAMP family protein;(source:Araport11) Ipc13G0014220 AT5G44960.1 F-box/RNI-like/FBD-like domains-containing protein 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc13G0014230 AT2G39370.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc13G0014240 AT1G29470.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0014250 AT1G22850.2 0 0 SNARE associated Golgi protein family;(source:Araport11) Ipc13G0014260 AT1G58340.1 MATE efflux family protein Encodes a plant MATE (multidrug and toxic compound extrusion) transporter that is localized to the Golgi complex and small organelles and is involved in determining the rate of organ initiation. It is also involved in iron homeostasis when plants are under osmotic stress. MATE efflux family protein;(source:Araport11) Ipc13G0014270 AT5G61180.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc13G0014280 AT3G12480.1 nuclear factor Y, subunit C11 0 nuclear factor Y, subunit C11;(source:Araport11) Ipc13G0014290 AT3G11450.1 DnaJ domain ;Myb-like DNA-binding domain Encodes a ZRF1 chromatin regulator. Functions in regulating plant growth and development. DnaJ and Myb-like DNA-binding domain-containing protein;(source:Araport11) Ipc13G0014300 AT5G56790.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0014310 AT5G65800.1 ACC synthase 5 1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition. ACC synthase 5;(source:Araport11) Ipc13G0014320 AT5G23450.5 0 Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine. long-chain base (LCB) kinase 1;(source:Araport11) Ipc13G0014330 AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein ERI (At3g15140) encodes a protein of 337 amino acids of the ribonuclease H-like superfamily. The protein contains both DEDDh and SAP domains.The first exon contains a TCT-microsatellite structure (starting 226 bp after ATG) that, based on sequence complementarity, is a miR5021-cleavage target site. ERI is predicted to function as an siRNA exonuclease. Overexpression leads to increased post transcriptional gene silencing and reduced numbers of 21mers. Macroscopically, the growth rate is increased in overexpressors leading to increased biomass. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0014340 AT5G09860.1 nuclear matrix protein-related Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. One of the pathways affected by THO1 is the miRNA399-PHO2 pathway that regulates root APase activity. nuclear matrix protein-like protein;(source:Araport11) Ipc13G0014350 AT2G38720.1 microtubule-associated protein 65-5 0 microtubule-associated protein 65-5;(source:Araport11) Ipc13G0014360 AT5G13530.1 protein kinases;ubiquitin-protein ligases Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. protein kinases;(source:Araport11) Ipc13G0014370 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc13G0014380 AT3G05310.2 0 Encodes a protein with similarity to MIRO GTPases. MIRO-related GTP-ase 3;(source:Araport11) Ipc13G0014390 AT1G08315.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0014400 AT2G40925.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0014410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0014420 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc13G0014430 AT1G68490.1 0 0 translocase subunit seca;(source:Araport11) Ipc13G0014440 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0014450 AT4G18230.3 0 0 UDP-N-acetylglucosamine transferase subunit ALG14-like protein;(source:Araport11) Ipc13G0014460 AT4G18230.4 0 0 UDP-N-acetylglucosamine transferase subunit ALG14-like protein;(source:Araport11) Ipc13G0014470 AT5G07030.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0014480 AT5G13500.3 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc13G0014490 AT3G07960.1 Phosphatidylinositol-4-phosphate 5-kinase family protein Encodes phosphatidylinositol-4-phosphate 5-kinase 6 (PIP5K6). Regulates clathrin-dependent endocytosis in pollen tubes. Phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc13G0014500 AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein 0 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein;(source:Araport11) Ipc13G0014510 AT5G13810.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc13G0014520 AT2G45300.4 0 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisThe mRNA is cell-to-cell mobile. RNA 3-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta;(source:Araport11) Ipc13G0014530 AT3G43110.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0014540 AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family 0 Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11) Ipc13G0014550 AT3G23730.1 xyloglucan endotransglucosylase/hydrolase 16 0 xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11) Ipc13G0014560 AT1G67430.1 Ribosomal protein L22p/L17e family protein 0 Ribosomal protein L22p/L17e family protein;(source:Araport11) Ipc13G0014570 AT5G25060.1 RNA recognition motif (RRM)-containing protein 0 RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc13G0014580 AT3G54490.1 RNA polymerase II fifth largest subunit, E NRPE5-like protein of unknown function; homologous to budding yeast RPB5 RNA polymerase II fifth largest subunit, E;(source:Araport11) Ipc13G0014590 AT3G54500.1 0 Member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK2 along with LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex. Functions as a transcriptional coactivator. agglutinin-like protein;(source:Araport11) Ipc13G0014610 AT1G40104.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0014600 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc13G0014620 AT2G38750.1 annexin 4 Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis. annexin 4;(source:Araport11) Ipc13G0014630 AT2G38760.1 annexin 3 Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. The mRNA is cell-to-cell mobile. annexin 3;(source:Araport11) Ipc13G0014640 AT5G05210.1 Surfeit locus protein 6 0 Surfeit locus protein 6;(source:Araport11) Ipc13G0014650 AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc Involved in trichome maturation. mutant displays enlarged trichomes Arp2/3 complex, 34 kD subunit p34-Arc;(source:Araport11) Ipc13G0014660 AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 38;(source:Araport11) Ipc13G0014670 AT2G13440.1 glucose-inhibited division family A protein 0 glucose-inhibited division family A protein;(source:Araport11) Ipc13G0014680 AT1G04540.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0014690 AT2G19170.2 0 Encodes a novel subtilisin-like serine protease. subtilisin-like serine protease 3;(source:Araport11) Ipc13G0014700 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0014710 AT1G11000.3 0 A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc13G0014720 AT1G10760.3 0 Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein;(source:Araport11) Ipc13G0014730 AT5G63940.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc13G0014740 AT3G51930.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0014750 AT1G24267.2 Protein of unknown function (DUF1664) 0 bZIP transcription factor, putative (DUF1664);(source:Araport11) Ipc13G0014760 AT1G26900.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0014770 AT1G36510.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc13G0014780 AT4G31560.1 high chlorophyll fluorescence 153 Encodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane. high chlorophyll fluorescence 153;(source:Araport11) Ipc13G0014790 AT1G74470.1 Pyridine nucleotide-disulphide oxidoreductase family protein Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. The mRNA is cell-to-cell mobile. Pyridine nucleotide-disulfide oxidoreductase family protein;(source:Araport11) Ipc13G0014800 AT5G13460.1 IQ-domain 11 0 IQ-domain 11;(source:Araport11) Ipc13G0014810 AT3G63440.1 cytokinin oxidase/dehydrogenase 6 This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 6;(source:Araport11) Ipc13G0014820 AT2G16770.2 0 Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0014830 AT5G13800.3 0 Encodes a pheophytinase that is involved in chlorophyll breakdown. Its transcript levels increase during senescence and pph-1 mutants have a stay-green phenotype. pheophytinase;(source:Araport11) Ipc13G0014840 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0014850 AT3G51990.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0014860 AT1G56560.1 Plant neutral invertase family protein A/N-InvA is a neutral invertase that breaks sucrose down into fructose and glucose. It is member of the larger family of alkaline/neutral invertases (GH100). GFP-tagged A/N-InvA localizes to the mitochondria. atinva mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of A/N-InvA transcripts rise in response to a hydrogen peroxide treatment. Plant neutral invertase family protein;(source:Araport11) Ipc13G0014870 AT3G63460.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc13G0014880 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0014890 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0014900 AT5G13790.1 AGAMOUS-like 15 AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.AGL15 binds the HAE promoter in floral receptacles and represses HAE expression. AGL15 is phosphorylated in a MKK4/5 dependent manner in floral receptacles. Serines 231 and 257 are phosphorylated in floral receptacles. AGL15 also directly regulates the expression of the peroxidase PRX17, linking it to lignified tissue expression. AGAMOUS-like 15;(source:Araport11) Ipc13G0014910 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0014920 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0014930 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc13G0014940 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc13G0014950 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0014960 AT3G14870.5 0 0 hypothetical protein (DUF641);(source:Araport11) Ipc13G0014970 AT2G47010.2 0 0 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase;(source:Araport11) Ipc02G0001010 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001020 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0000970 AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc02G0000990 AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0001030 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc02G0001040 AT2G39660.1 botrytis-induced kinase1 Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. botrytis-induced kinase1;(source:Araport11) Ipc02G0001050 AT1G18560.1 BED zinc finger ;hAT family dimerisation domain 0 BED zinc finger and hAT dimerization domain-containing protein;(source:Araport11) Ipc02G0001060 AT3G47850.1 0 0 tRNA (Ile)-lysidine synthase;(source:Araport11) Ipc02G0001070 AT2G40540.5 0 putative potassium transporter AtKT2p (AtKT2) mRNA, potassium transporter 2;(source:Araport11) Ipc02G0001080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0001090 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0001100 AT3G49210.2 0 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc02G0001110 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001120 AT1G63710.1 cytochrome P450, family 86, subfamily A, polypeptide 7 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at highest level in mature stems and flowers. cytochrome P450, family 86, subfamily A, polypeptide 7;(source:Araport11) Ipc02G0001130 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0001140 AT4G33220.2 0 0 pectin methylesterase 44;(source:Araport11) Ipc02G0001150 AT5G51300.3 splicing factor-related Encodes a nuclear localized splicing factor homolog that is involved in alternative splicing of some mRNAs. splicing factor-like protein;(source:Araport11) Ipc02G0001160 AT1G68185.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc02G0001170 AT3G17750.1 Protein kinase superfamily protein Encodes a member of a plant-specific subgroup in the DYRK (dual-specificity tyrosine phosphorylation-regulated kinase) family. Protein kinase superfamily protein;(source:Araport11) Ipc02G0001180 AT1G52050.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc02G0001190 AT3G20260.1 Protein of unknown function (DUF1666) 0 DUF1666 family protein (DUF1666);(source:Araport11) Ipc02G0001200 AT3G18370.1 C2 domain-containing protein 0 C2 domain-containing protein;(source:Araport11) Ipc02G0001210 AT3G17360.2 0 PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1;(source:Araport11) Ipc02G0001220 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0001230 AT1G73970.4 0 0 obscurin-like protein;(source:Araport11) Ipc02G0001240 #N/A #N/A #N/A #N/A Ipc02G0001250 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc02G0001260 AT1G12520.1 copper chaperone for SOD1 Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. copper chaperone for SOD1;(source:Araport11) Ipc02G0001270 AT3G18480.1 CCAAT-displacement protein alternatively spliced product This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565–689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation. CCAAT-displacement protein alternatively spliced product;(source:Araport11) Ipc02G0001280 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0001290 AT3G18440.1 aluminum-activated malate transporter 9 Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves. The mRNA is cell-to-cell mobile. aluminum-activated malate transporter 9;(source:Araport11) Ipc02G0001300 AT5G01620.2 TRICHOME BIREFRINGENCE-LIKE 35 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL35 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. The biochemical phenotype can be observed in tbl35 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 35;(source:Araport11) Ipc02G0001310 AT1G11440.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0001320 AT1G63770.1 Peptidase M1 family protein 0 Peptidase M1 family protein;(source:Araport11) Ipc02G0001330 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0001340 AT1G68585.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0001350 AT4G11720.1 hapless 2 Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane. Target promoter of the male germline-specific transcription factor DUO1. hapless 2;(source:Araport11) Ipc02G0001360 AT5G23400.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0001370 AT1G13360.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0001380 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0001390 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001400 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001410 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc02G0001420 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc02G0001430 AT4G12020.11 0 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002,7(7):301. protein kinase family protein;(source:Araport11) Ipc02G0001440 AT3G18410.2 Complex I subunit NDUFS6 0 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6);(source:Araport11) Ipc02G0001450 AT5G16340.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc02G0001460 AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc02G0001470 AT5G08380.1 alpha-galactosidase 1 0 alpha-galactosidase 1;(source:Araport11) Ipc02G0001480 AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0001490 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc02G0001500 AT5G23430.1 Transducin/WD40 repeat-like superfamily protein One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0001510 AT3G06980.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc02G0001520 AT1G79090.3 0 Encodes a component of the mRNA decapping machinery that is found in complexes with and is phosphorylated by MPK4. The protein can be found in P-bodies after treatment with PAMPs. Pat1 mutants exhibit dwarfism and de-repressed immunity dependent on the immune receptor SUMM2. The pat1 constitutive defense phenotype is suppressed by summ2 such that pat1 summ2 mutants display a wild-type phenotype in response to biotrophic and necrotrophic pathogens. topoisomerase II-associated protein;(source:Araport11) Ipc02G0001530 AT1G16710.8 0 Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides. histone acetyltransferase of the CBP family 12;(source:Araport11) Ipc11G0001130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001540 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0001550 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc02G0001560 #N/A #N/A #N/A #N/A Ipc02G0001570 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001580 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001590 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0001600 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001610 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001630 AT5G38344.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc02G0001660 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001670 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001720 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001640 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc02G0001680 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001690 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001730 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001650 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc02G0001770 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0001780 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001700 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001710 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) IpcGene06329 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc02G0001740 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001860 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001870 AT5G57920.3 0 0 early nodulin-like protein 10;(source:Araport11) Ipc02G0001880 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001890 ATMG00270.1 NADH dehydrogenase 6 NADH dehydrogenase subunit 6 NADH dehydrogenase 6;(source:Araport11) Ipc02G0001900 ATMG00830.1 cytochrome C biogenesis 382 cytochrome c biogenesis orf382 cytochrome C biogenesis 382;(source:Araport11) Ipc02G0001910 AT1G65430.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc02G0001920 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0001930 AT4G01897.1 0 0 dihydroorotate dehydrogenase;(source:Araport11) Ipc02G0001940 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc02G0001950 AT1G26260.6 0 Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1. cryptochrome-interacting basic-helix-loop-helix 5;(source:Araport11) Ipc02G0001960 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc06G0000530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0001970 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001980 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001990 AT1G48380.1 root hair initiation protein root hairless 1 (RHL1) Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A. root hair initiation protein root hairless 1 (RHL1);(source:Araport11) Ipc02G0002000 AT1G13195.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0002010 AT4G19130.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc02G0002020 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc02G0002030 AT3G19180.1 paralog of ARC6 Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division. plastid division protein;(source:Araport11) Ipc02G0002040 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc02G0002050 AT3G19950.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0002060 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0002070 AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0002080 AT5G61950.1 Ubiquitin carboxyl-terminal hydrolase-related protein 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc02G0002090 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0002100 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc07G0005530 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc07G0005520 AT3G16500.1 phytochrome-associated protein 1 phytochrome-associated protein 1 (PAP1) phytochrome-associated protein 1;(source:Araport11) Ipc07G0005510 AT3G48750.1 cell division control 2 A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2;(source:Araport11) Ipc07G0005500 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc07G0005490 AT4G32850.3 nuclear poly(a) polymerase Encodes a nuclear poly(A) polymerase. Located in the nucleus. The mRNA is cell-to-cell mobile. nuclear poly(a) polymerase;(source:Araport11) Ipc07G0005480 AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc07G0005470 AT2G19760.1 profilin 1 first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues. profilin 1;(source:Araport11) Ipc07G0005460 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc07G0005450 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc07G0005440 AT1G76480.2 0 0 caveolin-1 protein;(source:Araport11) Ipc07G0005430 AT3G54190.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0005420 AT4G32820.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0005410 AT5G11700.2 0 0 ephrin type-B receptor;(source:Araport11) Ipc07G0005400 AT3G53920.1 RNApolymerase sigma-subunit C Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids. RNApolymerase sigma-subunit C;(source:Araport11) Ipc07G0005390 #N/A #N/A #N/A #N/A Ipc07G0005380 AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc07G0005370 AT4G29160.3 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc07G0005360 AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc07G0005350 AT5G11710.3 0 EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues.The mRNA is cell-to-cell mobile. ENTH/VHS family protein;(source:Araport11) Ipc07G0005340 AT2G25910.1 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein 0 3-5 exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein;(source:Araport11) Ipc07G0005330 AT2G25930.1 hydroxyproline-rich glycoprotein family protein Encodes a nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0005320 AT5G25950.1 Protein of Unknown Function (DUF239) 0 AslB, putative (DUF239);(source:Araport11) Ipc07G0005310 AT5G11730.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0005300 AT4G32940.1 gamma vacuolar processing enzyme Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death. gamma vacuolar processing enzyme;(source:Araport11) Ipc07G0005290 AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0005280 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0005270 AT3G13080.4 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc07G0005260 AT3G20430.1 0 0 phosphorylated adapter RNA export-like protein;(source:Araport11) Ipc07G0005250 AT2G28880.1 para-aminobenzoate (PABA) synthase family protein ADCS encodes a protein that has two functional domains. The N-terminal domain has glutamine amidotransferase activity while the C-terminal domain has aminodeoxychorismate synthase (ADCS) activity. These two domains act together to catalyze the transformation of chorismate to 4-amino-4-deoxychorismate. This reaction is required for 4-aminobenzoate (pABA) production and ultimately for folate biosynthesis. The putative target peptide of ADCS can direct GFP to the chloroplast. para-aminobenzoate (PABA) synthase family protein;(source:Araport11) Ipc07G0005240 AT4G21670.1 C-terminal domain phosphatase-like 1 encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. C-terminal domain phosphatase-like 1;(source:Araport11) Ipc07G0005230 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc07G0005220 AT3G20430.1 0 0 phosphorylated adapter RNA export-like protein;(source:Araport11) Ipc07G0005210 AT3G20430.1 0 0 phosphorylated adapter RNA export-like protein;(source:Araport11) Ipc07G0005200 AT4G32960.1 0 0 BRISC/BRCA1-A complex protein;(source:Araport11) Ipc07G0005190 AT3G50610.2 0 0 DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11) Ipc07G0005180 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc07G0005170 AT2G25950.1 Protein of unknown function (DUF1000) 0 PITH domain protein (DUF1000);(source:Araport11) Ipc07G0005160 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0005150 AT5G19130.2 GPI transamidase component family protein / Gaa1-like family protein 0 GPI transamidase component family protein / Gaa1-like family protein;(source:Araport11) Ipc07G0005140 AT4G32520.2 serine hydroxymethyltransferase 3 Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid. serine hydroxymethyltransferase 3;(source:Araport11) Ipc07G0005130 AT5G26030.2 ferrochelatase 1 encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins The mRNA is cell-to-cell mobile. ferrochelatase 1;(source:Araport11) Ipc07G0005120 AT3G48560.1 chlorsulfuron/imidazolinone resistant 1 Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1;(source:Araport11) Ipc07G0005110 AT2G25970.1 KH domain-containing protein 0 KH domain-containing protein;(source:Araport11) Ipc07G0005100 AT2G26040.1 PYR1-like 2 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYR1-like 2;(source:Araport11) Ipc07G0005090 AT4G10230.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc07G0005080 AT4G26800.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0005070 AT5G56840.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc07G0005060 AT1G58242.1 Plant thionin family protein 0 Plant thionin family protein;(source:Araport11) Ipc07G0005050 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0005040 AT4G33000.1 calcineurin B-like protein 10 Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. calcineurin B-like protein 10;(source:Araport11) Ipc07G0005030 AT4G33000.1 calcineurin B-like protein 10 Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. calcineurin B-like protein 10;(source:Araport11) Ipc07G0005020 AT5G11810.1 0 0 rhomboid family protein;(source:Araport11) Ipc07G0005010 AT4G33010.1 glycine decarboxylase P-protein 1 0 glycine decarboxylase P-protein 1;(source:Araport11) Ipc07G0005000 AT5G56880.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0004990 AT2G26110.1 Protein of unknown function (DUF761) 0 bromodomain protein (DUF761);(source:Araport11) Ipc07G0004980 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc07G0004970 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0004960 AT5G11890.1 0 0 harpin-induced protein;(source:Araport11) Ipc07G0004950 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc07G0004940 AT1G55110.3 0 0 indeterminate(ID)-domain 7;(source:Araport11) Ipc07G0004930 AT5G11910.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0004920 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc07G0004910 AT5G26160.3 0 0 light-independent protochlorophyllide reductase subunit;(source:Araport11) Ipc07G0004900 AT4G33110.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0004890 AT1G72770.4 0 mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.The mRNA is cell-to-cell mobile. HYPERSENSITIVE TO ABA1;(source:Araport11) Ipc07G0004880 AT2G20700.1 LORELEI-LIKE-GPI ANCHORED PROTEIN 2 0 LORELEI-LIKE-GPI ANCHORED PROTEIN 2;(source:Araport11) Ipc07G0004870 AT4G33080.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc07G0004860 AT4G26600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0004850 AT4G33060.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc07G0004840 AT5G12000.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc07G0004830 AT5G07740.1 actin binding 0 actin binding protein;(source:Araport11) Ipc07G0004820 AT1G25141.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc07G0004810 AT1G65680.1 expansin B2 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2;(source:Araport11) Ipc07G0004800 AT3G13920.1 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1;(source:Araport11) Ipc07G0004790 AT5G11970.1 Protein of unknown function (DUF3511) 0 ABC family ABC transporter, putative (DUF3511);(source:Araport11) Ipc07G0004780 AT5G11960.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc07G0004770 AT5G11950.3 0 Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210. Putative lysine decarboxylase family protein;(source:Araport11) Ipc07G0004760 AT1G61260.1 Protein of unknown function (DUF761) 0 cotton fiber (DUF761);(source:Araport11) Ipc07G0004750 AT1G14560.1 Mitochondrial substrate carrier family protein Encodes a mitochondrial CoA transporter. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0004740 AT2G26180.1 IQ-domain 6 Transient Expression of Pro35S:YFP-IQD5 in leaves of N. benthamiana alters microtubule organization. IQ-domain 6;(source:Araport11) Ipc07G0004730 AT4G33040.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2. Thioredoxin superfamily protein;(source:Araport11) Ipc07G0004720 #N/A #N/A #N/A #N/A Ipc07G0004710 AT5G56450.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0004700 #N/A #N/A #N/A #N/A Ipc07G0004690 AT1G72820.2 0 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0004680 AT5G20510.1 alfin-like 5 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 5;(source:Araport11) Ipc07G0004640 AT1G34340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0004660 AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0004670 AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0004650 AT1G34340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0004630 AT5G35530.1 Ribosomal protein S3 family protein 0 Ribosomal protein S3 family protein;(source:Araport11) Ipc07G0004620 AT2G26350.1 peroxin 10 Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis. peroxin 10;(source:Araport11) Ipc07G0004610 AT5G47430.2 DWNN domain, a CCHC-type zinc finger 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc07G0004600 AT5G40270.1 HD domain-containing metal-dependent phosphohydrolase family protein Protein of unknown function involved in chloroplast development. HD domain-containing metal-dependent phosphohydrolase family protein;(source:Araport11) Ipc07G0004590 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc07G0004580 AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc07G0004570 AT1G72030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc07G0004560 AT2G19260.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc07G0004550 AT1G72190.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0 D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc07G0004540 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0004530 AT1G70110.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0004520 AT3G55550.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0004510 AT3G45310.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc07G0004500 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0004490 AT2G26330.1 Leucine-rich receptor-like protein kinase family protein Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. ER binds to the peptides STOMAGEN and EPF2 which compete for the same binding site. The ER-EFP2 complex activates MAPK signaling that inhibits stomatal development. ER-STOMAGEN does not activate MAPK signaling. Plants harboring loss of function alleles of er are more susceptible to heat stress than wild type. In Arabidopsis and other organisms, overexpression of ER confers thermotolerance via as yet undefined mechanisms. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc07G0004480 AT5G21920.1 YGGT family protein One of four Arabidopsis homologs of bacterial ymlg proteins. YGGT family protein;(source:Araport11) Ipc07G0004470 AT1G02180.1 ferredoxin-related 0 ferredoxin-like protein;(source:Araport11) Ipc07G0004460 AT5G21482.1 cytokinin oxidase 7 This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 7;(source:Araport11) Ipc07G0004450 AT3G24480.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc07G0004440 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0004430 AT4G33200.1 myosin, putative member of Myosin-like proteins myosin;(source:Araport11) Ipc07G0004420 #N/A #N/A #N/A #N/A Ipc07G0004410 AT3G43860.2 0 0 glycosyl hydrolase 9A4;(source:Araport11) Ipc07G0004400 AT4G33180.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0004390 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc07G0004380 #N/A #N/A #N/A #N/A Ipc07G0004370 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0004360 AT1G48270.2 0 encodes a protein similar to G-coupled receptor with 7 transmembrane regions. Overexpression studies suggest this gene is involved in dormancy and flowering. Reduction of expression results in decreased sensitivity to cytokinin. G-protein-coupled receptor 1;(source:Araport11) Ipc07G0004350 AT5G20650.1 copper transporter 5 Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis. copper transporter 5;(source:Araport11) Ipc07G0004340 AT1G72510.2 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc07G0004330 AT5G11260.1 Basic-leucine zipper (bZIP) transcription factor family protein Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc07G0004320 AT1G30140.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc07G0004310 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc07G0004300 AT2G36990.1 RNApolymerase sigma-subunit F Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation. RNApolymerase sigma-subunit F;(source:Araport11) Ipc07G0004290 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0004280 AT1G64870.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0004270 AT2G34160.1 Alba DNA/RNA-binding protein 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc07G0004260 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0004250 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc07G0004240 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc07G0004230 AT2G25530.1 AFG1-like ATPase family protein 0 AFG1-like ATPase family protein;(source:Araport11) Ipc07G0004220 #N/A #N/A #N/A #N/A Ipc07G0004210 AT3G11980.1 Jojoba acyl CoA reductase-related male sterility protein Similar to fatty acid reductases. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc07G0004200 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0004190 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0004180 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0004170 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc07G0004160 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0004150 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0004140 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc07G0004130 AT4G17970.1 aluminum-activated, malate transporter 12 Anion transporter involved in stomatal closure. Gene has 3 splicing variants. aluminum-activated, malate transporter 12;(source:Araport11) Ipc07G0004120 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc07G0004110 AT2G26600.2 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc07G0004100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0004090 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc07G0004080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0004070 AT4G00450.3 0 Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype. RNA polymerase II transcription mediator;(source:Araport11) Ipc07G0004060 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0004050 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0004040 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc07G0004010 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0004000 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc07G0003990 AT4G30020.4 0 0 PA-domain containing subtilase family protein;(source:Araport11) Ipc07G0003980 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc07G0003970 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0003960 AT4G32390.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc07G0003950 AT5G06740.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0003940 AT1G28130.2 Auxin-responsive GH3 family protein Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. Auxin-responsive GH3 family protein;(source:Araport11) Ipc07G0003930 AT5G11200.1 DEAD/DEAH box RNA helicase family protein One of two genes encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions of Arabidopsis nuclei, and associates with genes transcribed by RNA polymerase II independently from the presence of introns. It is not detected at non-transcribed loci. It interacts with ssRNA, dsRNA and dsDNA, but not with ssDNA. Its ATPase activity is stimulated by RNA and dsDNA and its ATP-dependent RNA helicase activity unwinds dsRNA but not dsDNA. DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc07G0003920 AT5G20150.1 SPX domain gene 1 Expression is upregulated in the shoot of cax1/cax3 mutant. Additionally, its expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. The mRNA is cell-to-cell mobile. SPX domain-containing protein 1;(source:Araport11) Ipc07G0003910 AT1G66680.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein unknown function S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0003900 AT2G02960.6 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc07G0003890 AT5G05210.1 Surfeit locus protein 6 0 Surfeit locus protein 6;(source:Araport11) Ipc07G0003880 AT3G49500.5 0 Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.Loss of function mutants produce ectopic megaspore mother cell and supernumary female gametophytes. RNA-dependent RNA polymerase 6;(source:Araport11) Ipc07G0003870 AT1G15360.2 0 Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0003860 AT3G14172.1 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc07G0003850 AT4G31920.1 response regulator 10 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 10;(source:Araport11) Ipc07G0003840 AT5G25360.3 0 0 hypothetical protein;(source:Araport11) Ipc07G0003830 AT2G45320.1 0 0 polyphosphatidylinositol phosphatase;(source:Araport11) Ipc07G0003820 AT2G25490.1 EIN3-binding F box protein 1 Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile. EIN3-binding F box protein 1;(source:Araport11) Ipc08G0005980 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc08G0005990 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0006000 AT1G10155.1 phloem protein 2-A10 0 phloem protein 2-A10;(source:Araport11) Ipc08G0006010 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0006020 AT5G20250.4 Raffinose synthase family protein encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile. Raffinose synthase family protein;(source:Araport11) Ipc08G0006030 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006040 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006050 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006060 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc08G0006070 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006080 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0006090 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc08G0006100 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc08G0006110 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006120 AT1G50430.2 Ergosterol biosynthesis ERG4/ERG24 family Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype. Ergosterol biosynthesis ERG4/ERG24 family;(source:Araport11) Ipc08G0006130 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0006140 AT5G52670.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc08G0006150 AT4G00230.2 0 0 xylem serine peptidase 1;(source:Araport11) Ipc08G0006160 AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0006170 AT5G23390.1 Plant protein of unknown function (DUF639) 0 polygalacturonase inhibitor (DUF639);(source:Araport11) Ipc08G0006180 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006190 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0019790 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006200 AT1G15400.3 0 0 hypothetical protein;(source:Araport11) Ipc08G0006210 AT3G54680.1 proteophosphoglycan-related 0 proteophosphoglycan-like protein;(source:Araport11) Ipc08G0006220 AT2G02103.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc08G0006230 AT4G19860.1 alpha/beta-Hydrolases superfamily protein Encodes a cytosolic calcium-independent phospholipase A. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0006240 AT5G45030.2 Trypsin family protein 0 Trypsin family protein;(source:Araport11) Ipc08G0006250 AT5G01210.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0006260 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006270 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006280 AT4G19880.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc08G0006290 AT3G27170.1 chloride channel B member of Anion channel protein family The mRNA is cell-to-cell mobile. chloride channel B;(source:Araport11) Ipc08G0006300 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc08G0006310 AT2G35110.2 transcription activators Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Mutant displays distorted trichomes, a phenotype that can be phenocopied by treatment of WT plants with actin-interacting drugs. Its ER localization is independent of upstream SPK1 activation signaling and the physical association with the WAVE/SCAR Regulatory complex binding partner SRA1. ER-localized NAP1 has little colocalization with actin and represent the inactive pool of NAP1 in these cell types. transcription activator;(source:Araport11) Ipc08G0006320 AT1G31170.2 sulfiredoxin encodes a cysteine-sulfinic acid reductase (sulfiredoxin - EC 1.8.98.2) capable of reducing overoxidized plastidic 2-Cys-Prx involved in peroxide detoxification and response to oxidative stress sulfiredoxin;(source:Araport11) Ipc08G0006330 AT2G35100.1 Exostosin family protein Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems. Exostosin family protein;(source:Araport11) Ipc08G0006340 AT4G27370.3 0 member of Myosin-like proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0006350 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006360 AT5G55390.3 0 Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. ENHANCED DOWNY MILDEW 2;(source:Araport11) Ipc08G0006370 AT2G35060.4 0 potassium transporter K+ uptake permease 11;(source:Araport11) Ipc08G0006380 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0006390 AT1G06490.2 0 Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding. glucan synthase-like 7;(source:Araport11) Ipc08G0006400 AT5G09930.1 ABC transporter family protein member of GCN subfamily ABC transporter family protein;(source:Araport11) Ipc08G0006410 AT1G79570.2 0 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc08G0006420 AT5G67460.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc08G0006430 AT3G14590.3 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc08G0006440 AT2G11000.1 MAK10 homologue Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type. MAK10 homologue;(source:Araport11) Ipc08G0006450 AT5G35200.2 0 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc08G0006460 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0006470 AT4G04890.2 0 Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 2;(source:Araport11) Ipc08G0006480 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc08G0006490 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006500 AT5G45910.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0006510 AT3G48400.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc08G0006520 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006530 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006540 AT2G10940.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc08G0006550 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0009060 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0009050 AT5G18525.1 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases Encodes a BEACH domain containing protein that is involved in targeting storage proteins to the protein storage vacuoles and effector triggered immunity to Psuedomonas syringae. protein serine/threonine kinase;(source:Araport11) Ipc06G0009040 AT5G36880.2 acetyl-CoA synthetase Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway acetyl-CoA synthetase;(source:Araport11) Ipc06G0009030 AT4G26580.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0009020 AT4G31860.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc06G0009010 AT3G02820.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0009000 AT5G12320.1 ankyrin repeat family protein 0 ankyrin repeat family protein;(source:Araport11) Ipc06G0008990 AT2G02148.5 0 0 PPR containing protein;(source:Araport11) Ipc06G0008980 AT1G75010.1 GTP binding Encodes ARC3 (Accumulation and Replication of Chloroplast 3), a chloroplast division factor functioning in the initiation of chloroplast division. ARC3 is a chimera of the prokaryotic FtsZ and part of the eukaryotic phosphatidylinositol-4-phosphate 5-kinase (PIP5K). Located on the outer surface of the chloroplast in a ring-like structure at the early stage of chloroplast division. The arc3 mutant has a small number of abnormally large chloroplasts in the cell. GTP binding protein;(source:Araport11) Ipc06G0008970 AT2G02050.1 NADH-ubiquinone oxidoreductase B18 subunit, putative 0 NADH-ubiquinone oxidoreductase B18 subunit;(source:Araport11) Ipc06G0008960 AT1G14600.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0008950 AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc06G0008940 AT1G25240.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc06G0008930 AT1G68100.1 ZIP metal ion transporter family member of IAA-alanine resistance protein 1 ZIP metal ion transporter family;(source:Araport11) Ipc06G0008920 AT2G01910.1 Microtubule associated protein (MAP65/ASE1) family protein Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria. The mRNA is cell-to-cell mobile. Microtubule associated protein (MAP65/ASE1) family protein;(source:Araport11) Ipc06G0008910 AT4G15010.3 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc06G0008900 AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0008890 AT2G47430.1 Signal transduction histidine kinase Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte. Signal transduction histidine kinase;(source:Araport11) Ipc06G0008880 AT1G14710.2 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0008870 AT1G23280.1 MAK16 protein-related 0 MAK16 protein-like protein;(source:Araport11) Ipc06G0008860 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc06G0008850 AT5G37490.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0008840 AT1G67960.1 0 POD1 is involved in pollen tube guidence and early embryo patterning. POLLEN DEFECTIVE IN GUIDANCE-like protein;(source:Araport11) Ipc06G0008830 AT2G01818.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc06G0008820 AT5G42655.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc06G0008810 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc06G0008800 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0008790 AT1G66170.1 RING/FYVE/PHD zinc finger superfamily protein Encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to nuclear euchromatin specifically during diplotene. Required to regulate microtubule organization and cell cycle transitions during male meiosis, and functions as a direct transcription activator of the meiotic gene TDM1. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc06G0008780 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0008770 AT1G68765.1 Putative membrane lipoprotein Encodes a small protein of 77 amino acids. Loss of function mutations are defective in the process of ethylene independent floral organ abscission. Although the mutants have a normal appearing abscission zone, the floral organs do not abscisce. The peptide appears to be secreted and may function as a ligand. Arabidopsis 35S:IDA lines constitutively overexpressing IDA exhibit earlier abscission of floral organs, showing that the abscission zones are responsive to IDA soon after the opening of the flowers. In addition, ectopic abscission was observed at the bases of the pedicel, branches of the inflorescence, and cauline leaves. The silique valves also dehisced prematurely. Putative membrane lipoprotein;(source:Araport11) Ipc06G0008760 AT3G16170.1 AMP-dependent synthetase and ligase family protein Encodes a malonyl-CoA synthetase that is localized to the cytosol and mitochondrion. AAE13 produces two transcripts one of which includes an N terminal mitochondrial targeting motif. Loss of function of the mtAAE13 product results in growth arrest and lethality. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc06G0008750 AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0008740 AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0008730 AT1G67970.1 heat shock transcription factor A8 member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A8;(source:Araport11) Ipc06G0008720 AT1G01830.3 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0008710 AT2G16390.2 0 Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc06G0008700 AT3G04900.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc06G0008690 AT2G01755.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0008680 AT4G24840.1 0 0 oligomeric golgi complex subunit-like protein;(source:Araport11) Ipc06G0008670 AT1G14830.1 DYNAMIN-like 1C Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts. DYNAMIN-like 1C;(source:Araport11) Ipc06G0008660 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc06G0008650 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc06G0008640 AT2G33030.1 receptor like protein 25 0 receptor like protein 25;(source:Araport11) Ipc06G0008630 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc06G0008620 AT2G46890.1 Protein of unknown function (DUF1295) 0 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11) Ipc06G0008610 AT1G68060.1 microtubule-associated proteins 70-1 Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues. microtubule-associated proteins 70-1;(source:Araport11) Ipc06G0008600 AT1G25210.2 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc06G0008590 AT1G14850.1 nucleoporin 155 Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport nucleoporin 155;(source:Araport11) Ipc06G0008580 AT2G01690.1 ARM repeat superfamily protein Homologous to mammalian VAC14s, which is involved in the production of phosphatidylinositol 3,5-bisphosphate. Mutants are male gametophyte lethal. ARM repeat superfamily protein;(source:Araport11) Ipc06G0008570 AT2G01680.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0008560 AT2G02100.1 low-molecular-weight cysteine-rich 69 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. The mRNA is cell-to-cell mobile. low-molecular-weight cysteine-rich 69;(source:Araport11) Ipc06G0008550 AT5G37055.1 HIT-type Zinc finger family protein Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes. HIT-type Zinc finger family protein;(source:Araport11) Ipc06G0008540 AT1G50420.1 scarecrow-like 3 Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). scarecrow-like 3;(source:Araport11) Ipc06G0008530 AT1G24620.1 EF hand calcium-binding protein family Encodes a EF-hand calcium-binding protein family member. Mutants exhibit longer root hairs under phosphate-deficient conditions. EF hand calcium-binding protein family;(source:Araport11) Ipc06G0008520 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc06G0008510 AT4G25780.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc06G0008500 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0008490 AT1G24610.1 Rubisco methyltransferase family protein 0 Rubisco methyltransferase family protein;(source:Araport11) Ipc06G0008480 AT1G67920.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0008470 AT2G01660.1 plasmodesmata-located protein 6 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. plasmodesmata-located protein 6;(source:Araport11) Ipc06G0008460 AT5G17190.1 0 0 B-cell receptor-associated-like protein;(source:Araport11) Ipc06G0008450 AT2G01650.2 0 encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo. plant UBX domain-containing protein 2;(source:Araport11) Ipc06G0008440 AT5G64410.1 oligopeptide transporter 4 oligopeptide transporter oligopeptide transporter 4;(source:Araport11) Ipc06G0008430 AT2G01620.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc06G0008420 AT1G23220.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc06G0008410 AT2G01610.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc06G0008400 AT5G09640.1 serine carboxypeptidase-like 19 encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase. serine carboxypeptidase-like 19;(source:Araport11) Ipc06G0008390 AT1G70710.1 glycosyl hydrolase 9B1 endo-1,4-beta-glucanase. Involved in cell elongation. glycosyl hydrolase 9B1;(source:Araport11) Ipc06G0008380 AT1G70750.1 Protein of unknown function, DUF593 0 myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc06G0008370 AT1G70770.2 Protein of unknown function DUF2359, transmembrane 0 transmembrane protein (Protein of unknown function DUF2359, transmembrane);(source:Araport11) Ipc06G0008360 AT1G70780.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0008350 #N/A #N/A #N/A #N/A Ipc06G0008340 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc06G0008330 AT5G08780.1 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc06G0008320 AT5G08780.1 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc06G0008310 AT1G02420.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0008300 AT1G70940.1 Auxin efflux carrier family protein A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in regulating PIN3 trafficking to the plasma membrane. The mRNA is cell-to-cell mobile. Auxin efflux carrier family protein;(source:Araport11) Ipc06G0008290 AT1G23060.4 0 0 hypothetical protein;(source:Araport11) Ipc06G0008280 #N/A #N/A #N/A #N/A Ipc06G0008270 AT4G13955.1 0 Encodes a defensin-like (DEFL) family protein. defensin-like protein;(source:Araport11) Ipc06G0008260 AT1G49490.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0008250 AT2G02140.1 low-molecular-weight cysteine-rich 72 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. low-molecular-weight cysteine-rich 72;(source:Araport11) Ipc06G0008240 AT2G01410.1 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc06G0008230 AT3G10660.2 0 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2;(source:Araport11) Ipc06G0008220 AT2G01350.1 quinolinate phoshoribosyltransferase At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli. quinolinate phoshoribosyltransferase;(source:Araport11) Ipc06G0008210 AT3G10530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0008200 AT1G03860.3 prohibitin 2 prohibitin 2 prohibitin 2;(source:Araport11) Ipc06G0008190 AT1G71010.1 FORMS APLOID AND BINUCLEATE CELLS 1C Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. The mRNA is cell-to-cell mobile. FORMS APLOID AND BINUCLEATE CELLS 1C;(source:Araport11) Ipc06G0008180 AT3G06470.1 GNS1/SUR4 membrane protein family ELO family protein containing a characteristic histidine motif which binds to AtCb5-B, interacts with AtBI-1. Together with AtCb5-B interacts with KCR1, PAS2, and CER10, which are essential for the synthesis of VLCFAs. GNS1/SUR4 membrane protein family;(source:Araport11) Ipc06G0008170 AT2G01340.1 0 Encodes a protein whose expression is responsive to nematode infection. plastid movement impaired protein;(source:Araport11) Ipc06G0008160 AT1G71020.1 ARM repeat superfamily protein Encodes a nuclear localized plant U-Box protein that interacts with MYC2 and regulates its stability by acting as an E3 ubiquitin ligase and polyubiquitinating MYC2. By this mechanism, it targets MYC2 for destruction thereby affecting JA signaling. ARM repeat superfamily protein;(source:Araport11) Ipc06G0008150 AT3G50610.2 0 0 DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11) Ipc06G0008140 AT1G23000.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc06G0008130 AT1G22990.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc06G0008120 AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc06G0008110 AT2G01320.3 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc06G0008100 AT2G01270.1 quiescin-sulfhydryl oxidase 2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain. quiescin-sulfhydryl oxidase 2;(source:Araport11) Ipc06G0008090 AT1G66080.1 0 Encodes a glucose-regulated protein that binds to the promoters of glucose-regulated heat shock responsive genes and promotes chromatin acetylation. HLP1 is required in maintaining histone H3K acetylation and H3K4 methylation marks at the promoters of heat shock protein genes in providing thermotolerance/thermomemory response. hikeshi-like protein;(source:Araport11) Ipc06G0008080 AT5G13240.1 transcription regulators Global repressor of RNA polymerase III (Pol III). Maf1 repressor activity is critical for plant survival during environmental stresses, and is regulated by its phosphorylation/dephosphorylation through the activity of TOR and PP4/PP2A phosphatases. transcription regulator;(source:Araport11) Ipc06G0008070 AT5G55630.2 Outward rectifying potassium channel protein Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins. Outward rectifying potassium channel protein;(source:Araport11) Ipc06G0008060 AT3G30340.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc06G0008050 AT3G30340.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc06G0008040 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0008030 AT1G74130.1 Rhomboid-related intramembrane serine protease family protein 0 Rhomboid-related intramembrane serine protease family protein;(source:Araport11) Ipc06G0008020 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc06G0008010 AT1G15130.1 Endosomal targeting BRO1-like domain-containing protein 0 Endosomal targeting BRO1-like domain-containing protein;(source:Araport11) Ipc06G0008000 AT5G26820.1 iron-regulated protein 3 Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis. The mRNA is cell-to-cell mobile. iron-regulated protein 3;(source:Araport11) Ipc06G0007990 AT1G15140.1 FAD/NAD(P)-binding oxidoreductase 0 FAD/NAD(P)-binding oxidoreductase;(source:Araport11) Ipc06G0007980 AT5G08680.1 ATP synthase alpha/beta family protein Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile. ATP synthase alpha/beta family protein;(source:Araport11) Ipc06G0007970 AT5G52450.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc06G0007960 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc06G0007950 AT5G38650.1 Proteasome maturation factor UMP1 0 Proteasome maturation factor UMP1;(source:Araport11) Ipc06G0007940 AT3G15130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0007930 AT1G22970.1 0 0 cyclin-D1-binding protein;(source:Araport11) Ipc06G0007920 AT2G01110.1 Sec-independent periplasmic protein translocase mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein. Sec-independent periplasmic protein translocase;(source:Araport11) Ipc06G0007910 AT2G01120.1 origin recognition complex subunit 4 Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b. origin recognition complex subunit 4;(source:Araport11) Ipc06G0007900 AT1G08510.1 fatty acyl-ACP thioesterases B Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer. fatty acyl-ACP thioesterases B;(source:Araport11) Ipc06G0007890 AT1G15110.4 0 PSS1 encodes a base-exchange-type Phosphatidylserine (PS) synthase. Mutant analysis revealed its role in pollen maturation. phosphatidyl serine synthase family protein;(source:Araport11) Ipc06G0007880 AT2G01130.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc06G0007870 AT3G18210.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620), participates in epigenetic repression of flowering genes, works redundantly with ICU11 to repress several members of the MADS-box transcription factors family, during vegetative development via histone modification. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0007860 AT1G68200.5 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc06G0007850 AT1G68190.3 0 0 B-box zinc finger family protein;(source:Araport11) Ipc06G0007840 AT1G68185.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc06G0007830 AT3G02600.2 lipid phosphate phosphatase 3 Encodes phosphatidic acid phosphatase. Expressed during germination. lipid phosphate phosphatase 3;(source:Araport11) Ipc06G0007820 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc06G0007810 AT1G15060.3 0 0 alpha/beta hydrolase family protein;(source:Araport11) Ipc06G0007800 AT2G01200.2 indole-3-acetic acid inducible 32 Belongs to auxin inducible gene family. indole-3-acetic acid inducible 32;(source:Araport11) Ipc06G0007790 AT2G01220.2 Nucleotidylyl transferase superfamily protein 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc06G0007780 AT3G18280.2 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc06G0007770 AT1G77360.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0007760 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0007750 AT4G35440.1 chloride channel E Enclodes a choride channel protein that is localized to the thlakoid membrane. chloride channel E;(source:Araport11) Ipc06G0007740 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc06G0007730 AT1G59218.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007720 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007710 AT5G38260.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0007700 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0007690 AT1G07400.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc06G0007680 AT1G68410.4 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc06G0007670 AT1G10880.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Putative role in response to salt stress. Mutants grow larger than the wild type under salt stress condition (Ann Stapleton and Ashley Green, 2009, personal communication). core-2/I-branching beta-1,6-n-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc06G0007660 AT1G68350.1 0 0 cotton fiber protein;(source:Araport11) Ipc06G0007650 AT1G25370.2 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc06G0007640 AT1G25370.2 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc06G0007630 AT1G68330.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc06G0007620 AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative 0 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11) Ipc06G0007610 AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative 0 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11) Ipc06G0007600 #N/A #N/A #N/A #N/A Ipc06G0007590 AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes CESTA, a positive regulator of brassinosteroid biosynthesis. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0007580 AT1G68460.1 isopentenyltransferase 1 Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis. isopentenyltransferase 1;(source:Araport11) Ipc06G0007570 AT1G77420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0007560 AT3G25905.1 CLAVATA3/ESR-RELATED 27 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 27;(source:Araport11) Ipc06G0007550 AT3G02550.1 LOB domain-containing protein 41 0 LOB domain-containing protein 41;(source:Araport11) Ipc06G0007540 AT1G25440.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc06G0007530 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc06G0007520 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc06G0007510 AT1G59218.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007490 AT1G74360.1 Leucine-rich repeat protein kinase family protein NILR1 encodes a serine/threonine kinase involved in defense response to nematodes. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0007500 AT3G50950.2 HOPZ-ACTIVATED RESISTANCE 1 Encodes a canonical CC-type NLR protein that is required for the recognition of the T3SE HopZ1a from the pathogenic bacteria P. syringae. HOPZ-ACTIVATED RESISTANCE 1;(source:Araport11) Ipc06G0007480 AT1G68550.2 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0007470 AT1G68550.2 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0007460 AT4G36550.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0007450 AT2G03690.1 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein Ubiquinone biosynthesis protein COQ4 homolog. coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein;(source:Araport11) Ipc06G0007440 AT3G25882.1 NIM1-interacting 2 encodes a kinase that physically interacts with NPR1/NIM1 NIM1-interacting 2;(source:Araport11) Ipc06G0007430 AT3G25882.1 NIM1-interacting 2 encodes a kinase that physically interacts with NPR1/NIM1 NIM1-interacting 2;(source:Araport11) Ipc06G0007420 AT2G28390.1 SAND family protein 0 SAND family protein;(source:Araport11) Ipc06G0007410 AT1G13360.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0007400 AT3G02540.1 Rad23 UV excision repair protein family Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. Rad23 UV excision repair protein family;(source:Araport11) Ipc06G0007390 AT4G39670.1 Glycolipid transfer protein (GLTP) family protein 0 Glycolipid transfer protein (GLTP) family protein;(source:Araport11) Ipc06G0007380 AT3G25860.1 2-oxoacid dehydrogenases acyltransferase family protein Encodes the dihydrolipoamide S-acetyltransferase subunit of the plastid Pyruvate Dehydrogenase Complex (E2). Mutant has embryo defect. 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) Ipc06G0007370 AT3G25860.1 2-oxoacid dehydrogenases acyltransferase family protein Encodes the dihydrolipoamide S-acetyltransferase subunit of the plastid Pyruvate Dehydrogenase Complex (E2). Mutant has embryo defect. 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) Ipc06G0007360 AT1G67790.1 0 0 sieve element occlusion protein;(source:Araport11) Ipc06G0007350 AT3G25855.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc06G0007340 AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc06G0007330 AT4G32820.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0007320 AT1G02080.2 transcription regulators Acts as scaffold protein in the CCR4-NOT complex, by interacting with various NOT proteins and CAF1. transcription regulator;(source:Araport11) Ipc06G0007310 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0007300 AT3G25840.2 Protein kinase superfamily protein Spliceosome-associated kinase involved in alternative splicing. May influence alternative splicing patterns by phosphorylating a subset of splicing regulators. Protein kinase superfamily protein;(source:Araport11) Ipc06G0007280 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007270 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc06G0007290 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc06G0007260 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc06G0007250 AT1G13330.1 Arabidopsis Hop2 homolog Encodes the Arabidopsis Hop2 homologue. In other species, Hop2 is proposed to be involved in inter-homolog bias in double strand break repair. Tat-binding protein 1(Tbp-1)-interacting protein (TBPIP);(source:Araport11) Ipc06G0007240 AT3G25800.3 0 one of three genes encoding the protein phosphatase 2A regulatory subunit protein phosphatase 2A subunit A2;(source:Araport11) Ipc06G0007230 AT1G58410.4 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007220 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007210 AT1G58410.4 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007200 AT1G59620.1 Disease resistance protein (CC-NBS-LRR class) family Encodes CW9. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0007190 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc06G0007180 AT4G00060.4 0 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc06G0007170 AT1G68640.1 bZIP transcription factor family protein Encodes bZIP-transcription factor. Mutant plants have extra floral organs. PAN is essential for AG activation in early flowers of short-day-grown plants. bZIP transcription factor family protein;(source:Araport11) Ipc06G0007160 AT1G25530.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc06G0007150 AT1G25540.1 phytochrome and flowering time regulatory protein (PFT1) Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. PFT1 promotes flowering in CO dependent and independent pathways and integrates several environmental stimuli, such as light quality and JA-dependent defenses. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense. phytochrome and flowering time regulatory protein (PFT1);(source:Araport11) Ipc06G0007140 AT1G13290.1 C2H2-like zinc finger protein Encodes a putative zinc finger protein (C2H2 family, type IIIA, subclass A1d) that has a WIP domain. Seedlings with mutations in DOT5 have a misaligned venation defect in their leaves and cotyledons. Additional developmental abnormalities, such as elongated petioles and aberrant phyllotaxy suggest that DOT5 is required for normal shoot and root development. C2H2-like zinc finger protein;(source:Araport11) Ipc06G0007130 AT1G13260.1 related to ABI3/VP1 1 Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator. The mRNA is cell-to-cell mobile. related to ABI3/VP1 1;(source:Araport11) Ipc06G0007120 AT5G14520.1 pescadillo-related Encodes a nucleolar protein that plays an essential role in cell growth and survival through its regulation of ribosome biogenesis and mitotic progression. pescadillo-like protein;(source:Araport11) Ipc06G0007110 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0007100 AT3G25700.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0007090 AT1G68800.2 0 Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12;(source:Araport11) Ipc06G0007080 AT3G25680.1 0 0 SLH domain protein;(source:Araport11) Ipc06G0007070 AT4G20740.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc06G0007060 AT1G26100.1 Cytochrome b561/ferric reductase transmembrane protein family 0 Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc06G0007050 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc06G0007040 AT1G68780.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc06G0007030 AT3G24840.7 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc06G0007020 AT5G20480.2 0 Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. EF-TU receptor;(source:Araport11) Ipc06G0007010 AT5G63310.1 nucleoside diphosphate kinase 2 Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning. nucleoside diphosphate kinase 2;(source:Araport11) Ipc06G0007000 #N/A #N/A #N/A #N/A Ipc06G0006990 AT4G27110.1 COBRA-like protein 11 precursor 0 COBRA-like protein 11 precursor;(source:Araport11) Ipc06G0006980 AT3G14750.1 0 0 structural maintenance of chromosomes domain protein;(source:Araport11) Ipc06G0006970 AT3G60830.1 actin-related protein 7 Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission. actin-related protein 7;(source:Araport11) Ipc06G0006960 AT1G59218.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0006950 AT3G25620.2 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc06G0006940 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0006930 AT3G56800.1 calmodulin 3 encodes a calmodulin calmodulin 3;(source:Araport11) Ipc06G0006920 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0006910 AT2G20560.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc06G0006900 AT1G26120.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0006890 AT1G14030.1 Rubisco methyltransferase family protein Encodes a lysine methyltransferase whose main soluble physiological substrates are chloroplastic fructose 1,6-bisphosphate aldolases, FBA1, FBA2, and FBA3. Lysines near the C-terminal end of the target proteins are trimethylated. Rubisco methyltransferase family protein;(source:Araport11) Ipc06G0006880 AT1G14020.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc06G0006870 AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc06G0006860 AT1G14000.1 VH1-interacting kinase Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. The mRNA is cell-to-cell mobile. VH1-interacting kinase;(source:Araport11) Ipc06G0006850 AT5G07730.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0006840 AT1G69440.1 Argonaute family protein Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds. Argonaute family protein;(source:Araport11) Ipc06G0006830 AT1G26650.1 0 0 Son of sevenless protein;(source:Araport11) Ipc06G0006820 AT1G69420.2 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc06G0006810 AT1G13960.1 WRKY DNA-binding protein 4 Encodes WRKY DNA-binding protein 4 (WRKY4). WRKY DNA-binding protein 4;(source:Araport11) Ipc06G0006800 AT2G03350.1 Protein of unknown function, DUF538 0 DUF538 family protein (Protein of unknown function, DUF538);(source:Araport11) Ipc06G0006790 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc06G0006780 AT1G69350.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0006770 AT1G69220.1 Protein kinase superfamily protein Encodes serine/threonine kinase 1 (SIK1), a Hippo homolog. Regulates cell proliferation and cell expansion. Protein kinase superfamily protein;(source:Araport11) Ipc06G0006760 AT1G13690.1 ATPase E1 AtE1 - stimulates the ATPase activity of DnaK/DnaJ ATPase E1;(source:Araport11) Ipc06G0006750 AT1G26340.1 cytochrome B5 isoform A encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro. cytochrome B5 isoform A;(source:Araport11) Ipc06G0006740 AT1G26330.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc06G0006730 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc06G0006720 AT1G69160.1 0 0 suppressor;(source:Araport11) Ipc06G0006710 AT5G15790.5 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0006700 AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein;(source:Araport11) Ipc06G0006690 AT4G33145.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0006680 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc06G0006670 AT5G51220.1 ubiquinol-cytochrome C chaperone family protein 0 ubiquinol-cytochrome C chaperone family protein;(source:Araport11) Ipc06G0006660 AT2G03800.2 0 encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. D-aminoacyl-tRNA deacylase;(source:Araport11) Ipc06G0006650 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc06G0006640 AT4G25740.1 RNA binding Plectin/S10 domain-containing protein 0 RNA binding Plectin/S10 domain-containing protein;(source:Araport11) Ipc06G0006630 AT1G69010.1 BES1-interacting Myc-like protein 2 Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BES1-interacting Myc-like protein 2;(source:Araport11) Ipc06G0006620 AT3G45390.1 Concanavalin A-like lectin protein kinase family protein 0 LOW protein: L-type lectin-domain receptor kinase-like protein;(source:Araport11) Ipc06G0006610 AT1G17440.2 Transcription initiation factor TFIID subunit A Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. Cytokinin-hypersensitive 1 (CKH1) mutants are characterized by rapidly growing calli with a green color at low levels of cytokinins, which are insufficient to induce such cytokinin responses in wild-type explants. It is hypothesized that CKH1 acts as a negative regulator of cytokinin signaling in Arabidopsis. Transcription initiation factor TFIID subunit A;(source:Araport11) Ipc06G0006600 AT2G03890.1 phosphoinositide 4-kinase gamma 7 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. The mRNA is cell-to-cell mobile. phosphoinositide 4-kinase gamma 7;(source:Araport11) Ipc06G0006590 AT5G03490.1 UDP-Glycosyltransferase superfamily protein Encodes a dihydroxybenzoic acid (DHBA) glycosyltransferase. The Col-0 enzyme is responsible for biosynthesis of 2,3-DHBA xyloside and 2,5-DHBA xyloside. The Col-0 enzyme is specific for UDP-xylose and the C24 enzyme uses both UDP-glucose and UDP-xylose. This difference in sugar donor specificity was shown to be largely due to a single amino acid change between the two isoforms. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0006580 AT1G68920.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0006570 AT1G68910.1 WPP domain-interacting protein 2 Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells. WPP domain-interacting protein 2;(source:Araport11) Ipc06G0006560 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc06G0006550 AT2G16070.2 plastid division2 An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. plastid division2;(source:Araport11) Ipc06G0006540 AT3G02360.2 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc06G0006530 AT2G15430.1 DNA-directed RNA polymerase family protein Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V. DNA-directed RNA polymerase family protein;(source:Araport11) Ipc06G0006520 AT1G68850.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc06G0006510 AT5G23710.1 DNA binding;DNA-directed RNA polymerases 0 DNA binding / DNA-directed RNA polymerase;(source:Araport11) Ipc06G0006500 AT1G48900.1 Signal recognition particle, SRP54 subunit protein 0 Signal recognition particle, SRP54 subunit protein;(source:Araport11) Ipc06G0006490 AT3G13900.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Encodes a member of the P4 subfamily of P-type ATPases expressed in the pollen plasma membrane. Double mutants with ALA6 display pollen and pollen tube defects. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc06G0006480 AT3G25570.2 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc06G0006470 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc06G0006460 AT1G13560.1 aminoalcoholphosphotransferase 1 Encodes aminoalcoholphosphotransferase AAPT1. aminoalcoholphosphotransferase 1;(source:Araport11) Ipc06G0006450 AT1G13560.3 0 Encodes aminoalcoholphosphotransferase AAPT1. aminoalcoholphosphotransferase 1;(source:Araport11) Ipc06G0006440 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc06G0006430 AT3G25590.1 0 0 micronuclear linker histone polyprotein-like protein;(source:Araport11) Ipc06G0006420 AT5G41400.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0006410 AT2G40310.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0006400 AT3G61460.1 brassinosteroid-responsive RING-H2 Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. brassinosteroid-responsive RING-H2;(source:Araport11) Ipc06G0006390 AT1G63840.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0006380 AT3G43920.4 0 Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation. dicer-like 3;(source:Araport11) Ipc06G0006370 AT1G68720.1 tRNA arginine adenosine deaminase Encodes the chloroplastic A-to-I tRNA editing enzyme. tRNA arginine adenosine deaminase;(source:Araport11) Ipc06G0006360 AT1G68730.1 Zim17-type zinc finger protein 0 Zim17-type zinc finger protein;(source:Araport11) Ipc06G0006350 AT3G47500.1 cycling DOF factor 3 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 3;(source:Araport11) Ipc06G0006340 AT1G69580.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0006330 AT1G26800.1 RING/U-box superfamily protein MPSR1 is cytoplasmic E3 ligase that senses misfolded proteins independently of chaperones and targets those proteins for degradation via the 26S proteasome. RING/U-box superfamily protein;(source:Araport11) Ipc06G0006320 AT1G26820.1 ribonuclease 3 Encodes ribonuclease RNS3. ribonuclease 3;(source:Araport11) Ipc06G0006310 AT2G03390.4 0 0 uvrB/uvrC motif-containing protein;(source:Araport11) Ipc06G0006300 AT1G13920.4 0 0 Remorin family protein;(source:Araport11) Ipc06G0006290 AT1G74960.3 fatty acid biosynthesis 1 Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. fatty acid biosynthesis 1;(source:Araport11) Ipc06G0006280 AT2G20540.1 mitochondrial editing factor 21 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 21;(source:Araport11) Ipc06G0006270 AT5G61240.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0006260 AT1G73965.1 CLAVATA3/ESR-RELATED 13 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 13;(source:Araport11) Ipc06G0006250 #N/A #N/A #N/A #N/A Ipc06G0006230 AT1G13900.1 Purple acid phosphatases superfamily protein Encodes a dual-localized acid phosphatase (mitochondria and chloroplast) that modulates carbon metabolism. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc06G0006240 AT2G03450.1 purple acid phosphatase 9 0 purple acid phosphatase 9;(source:Araport11) Ipc06G0006220 AT3G29320.1 Glycosyl transferase, family 35 Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose. The mRNA is cell-to-cell mobile. Glycosyl transferase, family 35;(source:Araport11) Ipc06G0006210 AT3G02090.1 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc06G0006200 AT5G57230.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc06G0006190 AT1G13870.1 calmodulin binding;purine nucleotide binding Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots. Mutants also have no ncm5U (5-carbamoylmethyluridine). KTI12-like, chromatin associated protein;(source:Araport11) Ipc06G0006180 AT1G26470.1 0 0 chromatin modification-like protein;(source:Araport11) Ipc06G0006170 AT1G18650.1 plasmodesmata callose-binding protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 3;(source:Araport11) Ipc06G0006160 AT1G13750.1 Purple acid phosphatases superfamily protein Encodes a purple acid phosphatase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc06G0006150 AT2G03620.2 magnesium transporter 3 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 3;(source:Araport11) Ipc06G0006140 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0006130 AT2G03667.1 Asparagine synthase family protein 0 Asparagine synthase family protein;(source:Araport11) Ipc06G0006120 AT1G14300.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0006110 AT1G14290.1 sphingoid base hydroxylase 2 Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. sphingoid base hydroxylase 2;(source:Araport11) Ipc06G0006100 AT3G02010.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0006090 AT2G34980.1 phosphatidylinositolglycan synthase family protein Encodes a putative phosphatidylinositol-glycan synthase subunit C gene. It is involved in the first step of the glycosylphosphatidylinositol (GPI) biosynthetic pathway. phosphatidylinositolglycan synthase family protein;(source:Araport11) Ipc06G0006080 AT1G30950.1 F-box family protein Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY. F-box family protein;(source:Araport11) Ipc06G0006060 AT1G14220.1 Ribonuclease T2 family protein 0 Ribonuclease T2 family protein;(source:Araport11) Ipc06G0006070 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0006050 AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc06G0006040 AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc06G0006030 AT2G02800.2 protein kinase 2B Encodes protein kinase APK2b. protein kinase 2B;(source:Araport11) Ipc06G0006020 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0006010 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc06G0006000 AT1G69780.1 Homeobox-leucine zipper protein family Encodes a homeodomain leucine zipper class I (HD-Zip I) protein which is expressed during the seed-to-seedling transition, regulates some of the network nodes, and affects late seedling establishment. Knock-out mutants for athb13 showed increased primary root length as compared with wild type (Col-0) seedlings, suggesting that this transcription factor is a negative regulator of early root growth, possibly repressing cell division and/or cell elongation or the length of time cells elongate. Homeobox-leucine zipper protein family;(source:Araport11) Ipc06G0005990 AT1G14330.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0005980 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0005970 AT1G26920.1 0 0 zinc finger CCHC domain protein;(source:Araport11) Ipc06G0005960 AT5G63890.1 histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase;(source:Araport11) Ipc06G0005950 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc06G0005940 AT3G61700.3 0 0 helicase with zinc finger protein;(source:Araport11) Ipc06G0005930 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0005920 AT3G58520.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc06G0005910 AT3G45610.1 Dof-type zinc finger DNA-binding family protein PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc06G0005900 AT1G64570.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0005890 AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005880 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc06G0005870 AT1G69690.1 TCP family transcription factor AtTCP15 is involved in the regulation of endoreduplication. TCP family transcription factor;(source:Araport11) Ipc06G0005860 AT1G69680.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0 ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc06G0005850 AT1G14380.6 0 Encodes a microtubule-associated protein. IQ-domain 28;(source:Araport11) Ipc06G0005840 AT4G10300.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc06G0005830 AT1G14390.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0005820 AT1G14410.1 ssDNA-binding transcriptional regulator Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length. ssDNA-binding transcriptional regulator;(source:Araport11) Ipc06G0005810 AT5G15080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0005800 AT3G17900.2 0 0 unknown protein;(source:TAIR10) Ipc06G0005790 AT4G25630.1 fibrillarin 2 encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. The mRNA is cell-to-cell mobile. fibrillarin 2;(source:Araport11) Ipc06G0005780 AT2G02710.2 PAS/LOV protein B Encodes a putative blue light receptor protein. PAS/LOV protein B;(source:Araport11) Ipc06G0005770 AT1G69850.1 nitrate transporter 1:2 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems. nitrate transporter 1:2;(source:Araport11) Ipc06G0005760 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc06G0005750 AT2G02590.1 0 0 small multi-drug export protein;(source:Araport11) Ipc06G0005740 AT1G27060.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc06G0005730 AT1G27070.1 5'-AMP-activated protein kinase-related Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. PTST2 delivers suitable oligosaccharide substrates to starch synthase 4 (SS4). Mutants lacking PTST2 have fewer starch granules in leaf chloroplasts than the wild type. PTST2 is the Arabidopsis ortholog of the rice FLO6 protein. 5-AMP-activated protein kinase-like protein;(source:Araport11) Ipc06G0005720 AT1G27090.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc06G0005710 AT5G39950.1 thioredoxin 2 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin 2;(source:Araport11) Ipc06G0005700 AT1G10350.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc06G0005690 AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal 0 DNA-directed RNA polymerase, subunit M, archaeal;(source:Araport11) Ipc06G0005680 AT1G10360.1 glutathione S-transferase TAU 18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 18;(source:Araport11) Ipc06G0005670 AT4G16710.4 0 0 glycosyltransferase family protein 28;(source:Araport11) Ipc06G0005660 AT1G27100.1 Actin cross-linking protein 0 Actin cross-linking protein;(source:Araport11) Ipc06G0005650 AT1G10370.1 Glutathione S-transferase family protein Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses. Glutathione S-transferase family protein;(source:Araport11) Ipc06G0005640 AT1G10360.1 glutathione S-transferase TAU 18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 18;(source:Araport11) Ipc06G0005630 AT1G10370.1 Glutathione S-transferase family protein Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses. Glutathione S-transferase family protein;(source:Araport11) Ipc06G0005620 AT1G74800.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline galactosyltransferase GALT5. Functions together with GALT2 as redundant GALTs that control AGP (arabinogalactan-proteins) O-glycosylation, which is essential for normal growth and development. Mutants display multiple phenotypes including reduced root hair growth. Galactosyltransferase family protein;(source:Araport11) Ipc06G0005610 AT5G23400.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0005600 AT1G59650.1 Protein of unknown function (DUF1336) Encodes CW14. CW14 protein (DUF1336);(source:Araport11) Ipc06G0005590 AT1G59640.1 BIG PETAL P A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. transcription factor BIG PETAL P (BPE);(source:Araport11) Ipc06G0005580 AT1G69935.1 short hypocotyl in white light1 Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis. short hypocotyl in white light1;(source:Araport11) Ipc06G0005570 AT1G59820.1 aminophospholipid ATPase 3 Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 3;(source:Araport11) Ipc06G0005560 AT1G69970.2 CLAVATA3/ESR-RELATED 26 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 26;(source:Araport11) Ipc06G0005550 AT2G15490.3 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc06G0005540 AT5G24130.1 0 0 polypyrimidine tract-binding-like protein;(source:Araport11) Ipc06G0005530 AT1G10430.2 0 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. It regulates the activation of ADF/cofilin, which, in turn, regulates actin cytoskeleton remodeling and is involved in phot2-mediated chloroplast avoidance movements. protein phosphatase 2A-2;(source:Araport11) Ipc06G0005520 AT1G69980.1 0 0 structural polyprotein;(source:Araport11) Ipc06G0005510 AT1G27210.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0005500 AT1G24190.3 0 Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19. SIN3-like 3;(source:Araport11) Ipc06G0005490 AT1G59900.1 pyruvate dehydrogenase complex E1 alpha subunit encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC) The mRNA is cell-to-cell mobile. pyruvate dehydrogenase complex E1 alpha subunit;(source:Araport11) Ipc06G0005480 AT1G70090.2 glucosyl transferase family 8 Encodes a protein with putative galacturonosyltransferase activity. glucosyl transferase family 8;(source:Araport11) Ipc06G0005470 AT1G10460.1 germin-like protein 7 germin-like protein (GLP7) germin-like protein 7;(source:Araport11) Ipc06G0005460 AT3G17930.1 0 Encodes a thylakoid membrane protein involved in the accumulation of the cytochrome b6/f complex. transmembrane protein;(source:Araport11) Ipc06G0005450 AT1G70140.1 formin 8 Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton. formin 8;(source:Araport11) Ipc06G0005440 AT1G10470.1 response regulator 4 Encodes a two-component response regulator. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner. response regulator 4;(source:Araport11) Ipc06G0005430 AT1G19020.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc06G0005420 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc06G0005410 AT5G04410.1 NAC domain containing protein 2 NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light. The mRNA is cell-to-cell mobile. NAC domain containing protein 2;(source:Araport11) Ipc06G0005400 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0005390 AT1G24120.1 ARG1-like 1 encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined. ARG1-like 1;(source:Araport11) Ipc06G0005380 AT1G10520.1 DNA polymerase lambda (POLL) Encodes a homolog of the mammalian DNA polymerase lambda that is involved in the repair of UV-B induced DNA damage. DNA polymerase lambda (POLL);(source:Araport11) Ipc06G0005370 AT1G24090.1 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc06G0005360 AT1G70210.1 CYCLIN D1;1 Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination. CYCLIN D1;(source:Araport11) Ipc06G0005350 AT1G60010.1 0 0 D-ribose-binding periplasmic protein;(source:Araport11) Ipc06G0005340 AT1G60030.1 nucleobase-ascorbate transporter 7 0 nucleobase-ascorbate transporter 7;(source:Araport11) Ipc06G0005330 AT1G70230.1 TRICHOME BIREFRINGENCE-LIKE 27 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 27;(source:Araport11) Ipc06G0005320 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc06G0005310 AT3G28050.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc06G0005300 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0005290 AT5G26830.1 Threonyl-tRNA synthetase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. The mRNA is cell-to-cell mobile. Threonyl-tRNA synthetase;(source:Araport11) Ipc06G0005280 AT1G36280.1 L-Aspartase-like family protein 0 L-Aspartase-like family protein;(source:Araport11) Ipc06G0005270 AT5G40250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0005260 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005250 AT5G33330.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0005240 ATCG00680.1 photosystem II reaction center protein B encodes for CP47, subunit of the photosystem II reaction center. photosystem II reaction center protein B;(source:Araport11) Ipc06G0005230 ATCG00710.1 photosystem II reaction center protein H Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII. photosystem II reaction center protein H;(source:Araport11) Ipc06G0005220 ATCG00660.1 ribosomal protein L20 encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex ribosomal protein L20;(source:Araport11) Ipc06G0005210 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005200 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005190 #N/A #N/A #N/A #N/A Ipc06G0005170 AT3G11810.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0005180 AT3G11810.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0005160 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005150 AT5G51130.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc06G0005140 AT1G70300.1 K+ uptake permease 6 potassium transporter K+ uptake permease 6;(source:Araport11) Ipc06G0005130 AT1G49030.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc06G0005120 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005110 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0005100 AT1G60160.1 Potassium transporter family protein Member of the KT/KUP/HAK family of proton-coupled potassium transporters which have potential effect on cellular expansion. Potassium transporter family protein;(source:Araport11) Ipc06G0005090 AT4G31580.2 serine/arginine-rich 22 Encodes a Serine/arginine-rich (SR) protein RSZp22. SR proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. RSZp22 is located in the nucleolus. It is a nucleocytoplasmic shuttling protein and an interacting partner to the Arabidopsis U1-70K. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. serine/arginine-rich 22;(source:Araport11) Ipc06G0005080 AT4G13170.1 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc06G0005070 AT2G19260.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc06G0005060 AT4G36770.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0005050 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0005040 AT1G10560.1 plant U-box 18 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 18;(source:Araport11) Ipc06G0005030 AT5G18500.6 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0005020 AT3G57490.1 Ribosomal protein S5 family protein 0 Ribosomal protein S5 family protein;(source:Araport11) Ipc06G0005010 AT1G70330.1 equilibrative nucleotide transporter 1 encodes an adenosine transporter that catalyze a proton-dependent adenosine transport. The mRNA is cell-to-cell mobile. equilibrative nucleotide transporter 1;(source:Araport11) Ipc06G0005000 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc06G0004990 AT3G01460.1 methyl-CPG-binding domain 9 Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes. methyl-CPG-binding domain 9;(source:Araport11) Ipc06G0004970 AT2G15420.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc06G0004980 AT5G64370.1 beta-ureidopropionase PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation. beta-ureidopropionase;(source:Araport11) Ipc06G0004960 AT1G60220.1 UB-like protease 1D Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner. UB-like protease 1D;(source:Araport11) Ipc06G0004950 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc06G0004940 AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX. pyridoxin (pyrodoxamine) 5-phosphate oxidase;(source:Araport11) Ipc06G0004930 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc06G0004920 AT3G20280.5 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc06G0004910 AT1G10580.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0004900 AT1G10580.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0004890 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc06G0004880 AT1G23750.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0004870 AT5G14740.9 0 Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. carbonic anhydrase 2;(source:Araport11) Ipc06G0004860 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0004850 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc06G0004840 AT1G60800.1 NSP-interacting kinase 3 Encodes one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis. NSP-interacting kinase 3;(source:Araport11) Ipc06G0004830 AT1G23420.1 Plant-specific transcription factor YABBY family protein Essential for formation and asymmetric growth of the ovule outer integument. Member of the YABBY protein family of putative transcription factors that contain apparent Cys(2)-Cys(2) zinc-finger domains and regions of similarity to the high mobility group (HMG) transcription factors. INO may be required for polarity determination in the central part of the ovule. Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc06G0004820 AT2G28940.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0004810 AT1G23460.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0004800 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc06G0004790 AT2G01390.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0004780 AT1G60590.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0004770 AT2G38050.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) Ipc06G0004760 AT5G04410.1 NAC domain containing protein 2 NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light. The mRNA is cell-to-cell mobile. NAC domain containing protein 2;(source:Araport11) Ipc06G0004750 AT4G32180.3 pantothenate kinase 2 Encodes a protein with pantothenate kinase activity. pantothenate kinase 2;(source:Araport11) Ipc06G0004740 AT5G14670.3 0 A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1B;(source:Araport11) Ipc06G0004730 AT1G10600.4 0 0 associated molecule with the SH3 domain of STAM 2;(source:Araport11) Ipc06G0004720 AT1G70420.1 Protein of unknown function (DUF1645) 0 DNA ligase-like protein, putative (DUF1645);(source:Araport11) Ipc06G0004710 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0004700 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc06G0004690 AT1G10750.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal peptidase, putative (DUF239);(source:Araport11) Ipc06G0004680 AT1G10740.4 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0004670 AT1G70560.1 tryptophan aminotransferase of Arabidopsis 1 TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln. Lines carrying mutations in this gene are unaffected by auxin transporter inhibitor NPA. Double mutant analysis and exogenous auxin treatment suggest that this gene is required for auxin signaling during lateral root and root meristem development. tryptophan aminotransferase of Arabidopsis 1;(source:Araport11) Ipc06G0004660 AT1G60780.1 Clathrin adaptor complexes medium subunit family protein 0 Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc06G0004650 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc06G0004640 AT1G10700.1 phosphoribosyl pyrophosphate (PRPP) synthase 3 Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase. phosphoribosyl pyrophosphate (PRPP) synthase 3;(source:Araport11) Ipc06G0004630 AT1G10690.1 0 0 cyclin-dependent kinase inhibitor;(source:Araport11) Ipc06G0004620 AT3G26600.1 armadillo repeat only 4 Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. armadillo repeat only 4;(source:Araport11) Ipc06G0004610 AT1G43860.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc06G0004600 AT5G25800.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0004590 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc06G0004580 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc06G0004570 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc06G0004560 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc06G0004550 AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc06G0004540 AT3G26580.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0004530 AT4G32360.1 Pyridine nucleotide-disulphide oxidoreductase family protein 0 Pyridine nucleotide-disulfide oxidoreductase family protein;(source:Araport11) Ipc06G0004520 AT3G26570.2 phosphate transporter 2;1 low affinity phosphate transporter phosphate transporter 2;(source:Araport11) Ipc06G0004510 AT1G67910.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0004500 AT1G67900.6 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc06G0004490 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc06G0004480 AT3G55270.1 mitogen-activated protein kinase phosphatase 1 Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation. mitogen-activated protein kinase phosphatase 1;(source:Araport11) Ipc06G0004470 AT1G13030.1 sphere organelles protein-related Encodes a plant coilin, a protein that in other organisms is a major structural scaffolding protein necessary for Cajal body formation, composition and activity. It has been shown to bind both U1 and U1 snRNAs in vitro. sphere organelles protein-like protein;(source:Araport11) Ipc06G0004460 AT3G26400.1 eukaryotic translation initiation factor 4B1 member of eIF4B - eukaryotic initiation factor 4B The mRNA is cell-to-cell mobile. eukaryotic translation initiation factor 4B1;(source:Araport11) Ipc06G0004450 AT3G26430.1 GDSL-like Lipase/Acylhydrolase superfamily protein Encodes a functioning member of the GDS(L) lipase family with preference for long chain substrates that does not hydrolyze choline esters. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0004440 AT3G26430.1 GDSL-like Lipase/Acylhydrolase superfamily protein Encodes a functioning member of the GDS(L) lipase family with preference for long chain substrates that does not hydrolyze choline esters. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0004430 AT1G67850.4 0 0 lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11) Ipc06G0004420 #N/A #N/A #N/A #N/A Ipc06G0004410 AT1G12990.1 beta-1,4-N-acetylglucosaminyltransferase family protein 0 beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc06G0004400 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004390 AT5G23395.1 Cox19-like CHCH family protein Encodes Mia40, a component of the mitochondrial intermembrane space assembly machinery involved in the import pathway of the small intermembrane space proteins. Cox19-like CHCH family protein;(source:Araport11) Ipc06G0004380 AT5G08535.1 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc06G0004370 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0004360 AT1G67430.1 Ribosomal protein L22p/L17e family protein 0 Ribosomal protein L22p/L17e family protein;(source:Araport11) Ipc06G0004350 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004340 AT1G67590.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc06G0004330 AT1G67600.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc06G0004320 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc06G0004310 AT4G30810.1 serine carboxypeptidase-like 29 0 serine carboxypeptidase-like 29;(source:Araport11) Ipc06G0004300 AT4G22310.1 Uncharacterised protein family (UPF0041) 0 Uncharacterized protein family (UPF0041);(source:Araport11) Ipc06G0004290 AT5G08200.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc06G0004280 AT2G16860.2 0 0 GCIP-interacting family protein;(source:Araport11) Ipc06G0004270 AT3G03310.1 lecithin:cholesterol acyltransferase 3 0 lecithin:cholesterol acyltransferase 3;(source:Araport11) Ipc06G0004260 AT2G14820.2 0 A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc06G0004250 AT5G23190.1 cytochrome P450, family 86, subfamily B, polypeptide 1 cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development. cytochrome P450, family 86, subfamily B, polypeptide 1;(source:Araport11) Ipc06G0004240 AT5G23230.1 nicotinamidase 2 0 nicotinamidase 2;(source:Araport11) Ipc06G0004230 AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP Encodes Dim1 homolog. mRNA splicing factor, thioredoxin-like U5 snRNP;(source:Araport11) Ipc06G0004220 AT5G57860.3 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc06G0004210 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004200 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004190 AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc06G0004180 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0004170 AT5G27000.1 kinesin 4 Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. kinesin 4;(source:Araport11) Ipc06G0004160 AT1G13040.2 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc06G0004150 AT4G03490.4 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0004140 AT5G63570.1 glutamate-1-semialdehyde-2,1-aminomutase Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced. The mRNA is cell-to-cell mobile. glutamate-1-semialdehyde-2,1-aminomutase;(source:Araport11) Ipc06G0004130 AT5G23280.1 TCP family transcription factor Transcription factor which plays an important role during leaf and hypocotyl development, redundantly, with at least six class I TCPs, and regulates the expression of CYCD1;1 to affect endoreplication. TCP family transcription factor;(source:Araport11) Ipc06G0004120 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc06G0004110 AT5G23290.1 prefoldin 5 0 prefoldin 5;(source:Araport11) Ipc06G0004100 AT2G17570.1 Undecaprenyl pyrophosphate synthetase family protein 0 Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc06G0004090 AT5G08335.2 0 Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development. Isoprenylcysteine carboxyl methyltransferase (ICMT) family;(source:Araport11) Ipc06G0004080 AT1G68080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0004070 AT3G19960.5 0 member of Myosin-like proteins myosin 1;(source:Araport11) Ipc06G0004060 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc06G0004050 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004040 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003960 AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 1 Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression. cryptochrome-interacting basic-helix-loop-helix 1;(source:Araport11) Ipc06G0003940 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004030 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004020 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0004010 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0004000 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003990 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003980 AT2G21840.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc06G0003970 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003950 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003930 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003920 AT5G20550.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc06G0003910 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc06G0003900 AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 1 Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression. cryptochrome-interacting basic-helix-loop-helix 1;(source:Araport11) Ipc06G0003890 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc06G0003880 AT3G50310.1 mitogen-activated protein kinase kinase kinase 20 Encodes a member of MEKK subfamily. Target promoter of the male germline-specific transcription factor DUO1. Involved in osmotic stress response via regulation of MPK6 activity. It also plays an important role in regulating cell division and cell elongation in the primary root meristematic and elongation areas. Mutants show defects in root microtubule organization.It phosphorylates MPK18 and MKK3.It is a positive regulator of ABA-induced stomatal closure that acts by phosphorylating MKK5. mitogen-activated protein kinase kinase kinase 20;(source:Araport11) Ipc14G0017280 AT4G17615.5 0 Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation. calcineurin B-like protein 1;(source:Araport11) Ipc14G0017270 AT5G65050.3 AGAMOUS-like 31 Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. AGAMOUS-like 31;(source:Araport11) Ipc14G0017260 AT5G05140.1 Transcription elongation factor (TFIIS) family protein 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc14G0017250 AT5G15300.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0017240 AT4G00690.1 UB-like protease 1B 0 UB-like protease 1B;(source:Araport11) Ipc14G0017230 AT3G23820.1 UDP-D-glucuronate 4-epimerase 6 Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. The mRNA is cell-to-cell mobile. UDP-D-glucuronate 4-epimerase 6;(source:Araport11) Ipc14G0017220 AT5G47080.1 casein kinase II beta chain 1 Regulatory subunit beta of casein kinase II (CK2). purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis. casein kinase II beta chain 1;(source:Araport11) Ipc14G0017210 AT3G10950.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc14G0017200 AT5G09690.4 magnesium transporter 7 Transmembrane magnesium transporter. One of nine family members. Loss of function mutants exhibit poor growth under magnesium stress conditions. Splice variant AT5G09690.1 (386 aa) is a functional transporter while AT5G09690.4 (371 aa) does not have transporter activity. magnesium transporter 7;(source:Araport11) Ipc14G0017190 AT4G08840.1 pumilio 11 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 11;(source:Araport11) Ipc14G0017180 AT5G47070.1 Protein kinase superfamily protein Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens. Protein kinase superfamily protein;(source:Araport11) Ipc14G0017170 AT5G47060.2 0 0 hypothetical protein (DUF581);(source:Araport11) Ipc14G0017160 #N/A #N/A #N/A #N/A Ipc14G0017150 AT5G56230.1 prenylated RAB acceptor 1.G2 0 prenylated RAB acceptor 1.G2;(source:Araport11) Ipc14G0017140 AT1G32740.1 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc14G0017130 AT1G32730.1 0 0 electron carrier/iron ion-binding protein;(source:Araport11) Ipc14G0017120 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0017110 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc14G0017100 AT3G48310.1 cytochrome P450, family 71, subfamily A, polypeptide 22 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 22;(source:Araport11) Ipc14G0017090 AT5G47010.1 RNA helicase, putative Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. The mRNA is cell-to-cell mobile. RNA helicase;(source:Araport11) Ipc14G0017080 AT3G44713.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0017070 AT5G38610.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0017060 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0017050 AT5G46920.1 Intron maturase, type II family protein 0 Intron maturase, type II family protein;(source:Araport11) Ipc14G0017040 AT2G31530.1 SecY protein transport family protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. SecY protein transport family protein;(source:Araport11) Ipc14G0017030 AT1G67320.2 DNA primase, large subunit family 0 DNA primase, large subunit family;(source:Araport11) Ipc14G0017020 AT4G39160.3 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0017010 AT1G44750.6 0 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 11;(source:Araport11) Ipc14G0017000 AT3G60190.1 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E;(source:Araport11) Ipc14G0016990 AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc14G0016980 AT1G14820.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc14G0016970 AT2G32900.1 centromere/kinetochore protein, putative (ZW10) Homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation. Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus, contain a Zeste?White 10 (ZW10) domain and a Sec39 domain. Required for proper maturation of seed storage proteins. centromere/kinetochore protein, putative (ZW10);(source:Araport11) Ipc14G0016960 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc14G0016950 AT3G08670.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc14G0016940 AT5G46560.1 0 0 Man1-Src1p-carboxy-terminal domain protein;(source:Araport11) Ipc14G0016930 AT4G18020.9 0 Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). CheY-like two-component responsive regulator family protein;(source:Araport11) Ipc14G0016920 AT4G20280.1 TBP-associated factor 11 Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein). TBP-associated factor 11;(source:Araport11) Ipc14G0016910 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0016900 AT1G32400.3 tobamovirus multiplication 2A TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses. tobamovirus multiplication 2A;(source:Araport11) Ipc11G0002970 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0002960 AT1G76880.1 Duplicated homeodomain-like superfamily protein DF1 is a putative transcription factor required for the synthesis of seed mucilage polysaccharides. The df1 seeds produce almost 50% less mucilage than wild-type, but show less severe defects than the myb5 and ttg2 mutants. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc11G0002950 AT2G23610.1 methyl esterase 3 Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro. methyl esterase 3;(source:Araport11) Ipc11G0002940 AT5G47990.1 cytochrome P450, family 705, subfamily A, polypeptide 5 Encodes an endomembrane system-expressed member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings and show altered gravitropic responses. cytochrome P450, family 705, subfamily A, polypeptide 5;(source:Araport11) Ipc11G0002930 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc11G0002920 AT1G43650.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0002910 AT1G50710.1 0 0 HAUS augmin-like complex subunit;(source:Araport11) Ipc11G0002900 AT1G77010.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0002890 AT4G16444.1 0 GET1 membrane receptor homolog . ER localized protein that Interacts with GET3a. Disruption of both genes results in a decreased membrane localization of the SNARE proteinSYP123 and defects in root hair elongation. tail-anchored protein insertion receptor WRB-like protein;(source:Araport11) Ipc11G0002880 AT4G16444.1 0 GET1 membrane receptor homolog . ER localized protein that Interacts with GET3a. Disruption of both genes results in a decreased membrane localization of the SNARE proteinSYP123 and defects in root hair elongation. tail-anchored protein insertion receptor WRB-like protein;(source:Araport11) Ipc11G0002870 AT1G22120.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0002860 AT4G31370.1 FASCICLIN-like arabinogalactan protein 5 precursor fasciclin-like arabinogalactan-protein, putative (FLA5) FASCICLIN-like arabinogalactan protein 5 precursor;(source:Araport11) Ipc11G0002850 AT1G22120.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0002840 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0002830 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0002820 AT1G22120.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0002810 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0002800 AT1G69620.1 ribosomal protein L34 putative 60S ribosomal protein L34 The mRNA is cell-to-cell mobile. ribosomal protein L34;(source:Araport11) Ipc11G0002790 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0002780 AT5G14100.1 non-intrinsic ABC protein 14 member of NAP subfamily non-intrinsic ABC protein 14;(source:Araport11) Ipc11G0002770 AT1G18740.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc11G0002760 AT5G44080.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc11G0002750 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc11G0002740 AT1G43620.7 0 Encodes a UDP-glucose:sterol-glucosyltransferase. ugt80b1 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels, reduced seed size, and a transparent testa phenotype. The mutant seeds also have reduced levels of suberization and lipid polyester monomers. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc11G0002730 AT1G76760.1 thioredoxin Y1 Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma. thioredoxin Y1;(source:Araport11) Ipc11G0002720 AT1G76740.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0002710 AT2G34970.1 Trimeric LpxA-like enzyme 0 Trimeric LpxA-like enzyme;(source:Araport11) Ipc11G0002700 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0002690 AT5G50970.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0002680 AT1G76010.2 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc11G0002670 AT4G09170.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0002660 #N/A #N/A #N/A #N/A Ipc11G0002650 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc11G0002640 AT1G34150.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc11G0002630 AT2G29110.2 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.8;(source:Araport11) Ipc11G0002620 AT1G71780.1 0 0 WD repeat protein;(source:Araport11) Ipc11G0002610 AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55 type 2A protein serine/threonine phosphatase 55 kDa B Protein phosphatase 2A, regulatory subunit PR55;(source:Araport11) Ipc11G0002600 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc11G0002590 AT5G64810.1 WRKY DNA-binding protein 51 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 51;(source:Araport11) Ipc11G0002580 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0002570 AT4G09720.1 RAB GTPase homolog G3A 0 RAB GTPase homolog G3A;(source:Araport11) Ipc11G0002560 AT1G22750.4 0 0 transmembrane protein;(source:Araport11) Ipc11G0002550 AT2G21870.1 copper ion binding;cobalt ion binding;zinc ion binding Encodes the FAd subunit of mitochondrial F1F0-ATP synthase. Essential for pollen formation. MALE GAMETOPHYTE DEFECTIVE 1;(source:Araport11) Ipc11G0002540 AT1G71760.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0002530 AT4G34510.1 3-ketoacyl-CoA synthase 17 Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 17;(source:Araport11) Ipc11G0002520 AT5G09410.1 ethylene induced calmodulin binding protein calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum) ethylene induced calmodulin binding protein;(source:Araport11) Ipc11G0002510 AT4G34030.1 3-methylcrotonyl-CoA carboxylase MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. The mRNA is cell-to-cell mobile. 3-methylcrotonyl-CoA carboxylase;(source:Araport11) Ipc11G0002500 AT1G22770.1 gigantea protein (GI) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression. The mRNA is cell-to-cell mobile. gigantea protein (GI);(source:Araport11) Ipc11G0002490 AT4G39980.1 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae. The mRNA is cell-to-cell mobile. 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1;(source:Araport11) Ipc11G0002480 AT4G09810.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc11G0002470 AT5G10290.2 0 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc11G0002460 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0002440 AT3G61110.1 ribosomal protein S27 Arabidopsis ribosomal protein ribosomal protein S27;(source:Araport11) Ipc11G0002450 AT3G61110.1 ribosomal protein S27 Arabidopsis ribosomal protein ribosomal protein S27;(source:Araport11) Ipc11G0002430 AT3G46710.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc11G0002420 AT3G07060.1 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc11G0002410 AT2G01630.3 0 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc11G0002400 AT3G27835.1 Gamma-thionin family protein Encodes a defensin-like (DEFL) family protein. Gamma-thionin family protein;(source:Araport11) Ipc11G0002390 AT3G47450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. Mutant analyses show that this protein regulates growth and hormonal signaling and attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence, cell death, nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. Its localization to the chloroplast is enhanced by S-acylation. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0002380 AT3G24200.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc11G0002370 AT5G23800.1 DOMAIN OF UNKNOWN FUNCTION 724 10 Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 10);(source:Araport11) Ipc11G0002360 AT1G35895.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0002350 AT1G71790.1 Subunits of heterodimeric actin filament capping protein Capz superfamily Encodes a heterodimeric actin binding protein composed of an alpha and a beta sumunit. Stabilizes actin filament cytoskeleton by capping. Subunits of heterodimeric actin filament capping protein Capz superfamily;(source:Araport11) Ipc11G0002310 AT2G46505.1 succinate dehydrogenase subunit 4 Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion. succinate dehydrogenase subunit 4;(source:Araport11) Ipc11G0002270 AT4G08450.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc11G0002260 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0002250 AT1G34190.1 NAC domain containing protein 17 Encodes a NAC domain transcription factor that regulates the mitochondrial retrograde response and coordinates organellar functions and stress responses. NAC domain containing protein 17;(source:Araport11) Ipc11G0002240 AT5G09970.1 cytochrome P450, family 78, subfamily A, polypeptide 7 member of CYP78A cytochrome P450, family 78, subfamily A, polypeptide 7;(source:Araport11) Ipc11G0002230 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc11G0002220 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc11G0002210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0002200 AT4G22000.1 0 0 tyrosine sulfotransferase-like protein;(source:Araport11) Ipc11G0002190 AT5G58920.1 0 0 homeobox prospero protein;(source:Araport11) Ipc11G0002180 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc11G0002170 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc11G0002160 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc11G0002150 AT2G39890.2 proline transporter 1 Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem. proline transporter 1;(source:Araport11) Ipc11G0002140 #N/A #N/A #N/A #N/A Ipc11G0002130 #N/A #N/A #N/A #N/A Ipc11G0002120 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc11G0002110 AT1G34245.1 Putative membrane lipoprotein Encodes a secretory peptide EPF2 expressed in proliferating cells of the stomatal lineage, known as meristemoids, and in guard mother cells, the progenitors of stomata. Controls asymmetric cell divisions during stomatal development. EPF2 is related to EPF1, also involved in stomatal development. Its transcript levels change after inducing MUTE expression in a mute background. EPF2 binds to the ER receptor triggering MAPK activation that in turn inhibits stomatal development. EPF2 competes with STOMAGEN for binding to receptor protein kinases ER, and TMM. Putative membrane lipoprotein;(source:Araport11) Ipc11G0002100 AT1G12350.2 0 At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4?-phospho-N-pantothenoylcysteine (PPC) 4-phospho-panto-thenoylcysteine synthetase;(source:Araport11) Ipc11G0002090 AT1G77920.1 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc11G0002080 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0002070 AT1G22065.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0002060 AT3G50810.3 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc11G0002050 AT3G23020.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0002040 AT5G13220.6 0 Encodes JAZ10, a member of the JASMONATE ZIM-domain (JAZ) proteins acting as repressors of jasmonate (JA) signaling. An alternatively spliced form (JAZ10.4) of JAZ10 lacks the Jas domain. jasmonate-zim-domain protein 10;(source:Araport11) Ipc11G0002030 #N/A #N/A #N/A #N/A Ipc11G0002020 AT5G10180.1 slufate transporter 2;1 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. slufate transporter 2;(source:Araport11) Ipc11G0002010 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc11G0002000 AT1G78060.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc11G0001990 AT1G78070.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0001980 AT1G21610.1 wound-responsive family protein 0 wound-responsive family protein;(source:Araport11) Ipc11G0001970 AT1G71890.1 Major facilitator superfamily protein Encodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation. Major facilitator superfamily protein;(source:Araport11) Ipc11G0001960 AT2G31340.1 embryo defective 1381 0 embryo defective 1381;(source:Araport11) Ipc11G0001950 AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger 0 HCP-like superfamily protein with MYND-type zinc finger;(source:Araport11) Ipc11G0001940 AT3G01640.2 0 AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc11G0001930 AT1G21700.1 SWITCH/sucrose nonfermenting 3C a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). SWITCH/sucrose nonfermenting 3C;(source:Araport11) Ipc11G0001920 AT1G44000.1 0 0 STAY-GREEN-like protein;(source:Araport11) Ipc11G0001910 AT1G21380.1 Target of Myb protein 1 0 Target of Myb protein 1;(source:Araport11) Ipc11G0001900 AT2G40340.3 0 Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc11G0001890 AT5G09220.1 amino acid permease 2 member of AAAP family The mRNA is cell-to-cell mobile. amino acid permease 2;(source:Araport11) Ipc11G0001880 AT1G21660.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc11G0001870 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc11G0001860 AT1G11050.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0001850 AT1G77350.2 0 0 keratinocyte-associated-like protein;(source:Araport11) Ipc11G0001840 AT2G47450.1 chloroplast signal recognition particle component (CAO) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1. The mRNA is cell-to-cell mobile. chloroplast signal recognition particle component (CAO);(source:Araport11) Ipc11G0001830 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0001820 AT1G77460.4 0 Encodes a plasma membrane, microtubule associated protein with sequence similarity to CSI1 that is involved in cellulose biosynthesis and cell elongation. A mutation in CSI3 alone do not appear to affect growth but enhances the cell elongation phenotype of CSI1 mutants. CSI3 co localizes with CSI1 and CESA3 and CESA6. CELLULOSE SYNTHASE INTERACTIVE 3;(source:Araport11) Ipc11G0001810 AT5G44240.2 aminophospholipid ATPase 2 Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 2;(source:Araport11) Ipc11G0001800 AT1G18580.1 galacturonosyltransferase 11 Encodes a protein with putative galacturonosyltransferase activity.GAUT11 is required for pectin synthesis in seed coat epidermal cells and normal mucilage release. galacturonosyltransferase 11;(source:Araport11) Ipc11G0001790 AT3G03450.1 RGA-like 2 Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. RGA-like 2;(source:Araport11) Ipc11G0001780 AT1G69100.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0001770 AT2G19640.1 ASH1-related protein 2 0 ASH1-related protein 2;(source:Araport11) Ipc11G0001760 AT1G12650.4 0 0 rRNA biogenesis RRP36-like protein;(source:Araport11) Ipc11G0001750 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc11G0001740 AT1G79390.1 0 0 centrosomal protein;(source:Araport11) Ipc11G0001730 AT5G27260.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc11G0001720 AT1G21680.1 DPP6 N-terminal domain-like protein 0 DPP6 N-terminal domain-like protein;(source:Araport11) Ipc11G0001710 AT5G24840.1 tRNA (guanine-N-7) methyltransferase 0 tRNA (guanine-N-7) methyltransferase;(source:Araport11) Ipc11G0001700 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc11G0001690 AT1G77400.1 0 0 extensin-like protein;(source:Araport11) Ipc11G0001680 AT1G21690.1 ATPase family associated with various cellular activities (AAA) 0 ATPase family associated with various cellular activities (AAA);(source:Araport11) Ipc11G0001670 AT1G77300.1 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development. histone-lysine N-methyltransferase;(source:Araport11) Ipc11G0001660 AT4G37925.1 subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex;(source:Araport11) Ipc11G0001650 AT5G63480.2 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc11G0001640 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc11G0001630 AT5G61580.1 phosphofructokinase 4 0 phosphofructokinase 4;(source:Araport11) Ipc11G0001620 AT4G16120.1 COBRA-like protein-7 precursor putative membrane-anchored cell wall protein COBRA-like protein-7 precursor;(source:Araport11) Ipc11G0001610 AT4G29330.1 DERLIN-1 0 DERLIN-1;(source:Araport11) Ipc11G0001600 AT3G43890.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc11G0001590 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0001580 AT4G16720.1 Ribosomal protein L23/L15e family protein 0 Ribosomal protein L23/L15e family protein;(source:Araport11) Ipc11G0001570 AT4G37608.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0001560 AT3G01380.1 transferases;sulfuric ester hydrolases;catalytics;transferases 0 sulfatase and phosphatidylinositolglycan class N domain-containing protein;(source:Araport11) Ipc11G0001550 AT1G51890.5 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0001540 AT5G07630.2 0 0 lipid transporter;(source:Araport11) Ipc11G0001530 #N/A #N/A #N/A #N/A Ipc11G0001520 AT5G61460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0001510 AT5G07670.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc11G0001500 AT5G61450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0001490 AT5G61450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0001480 AT5G62420.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc11G0001470 AT3G47450.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. Mutant analyses show that this protein regulates growth and hormonal signaling and attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence, cell death, nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. Its localization to the chloroplast is enhanced by S-acylation. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0001460 AT4G12550.1 Auxin-Induced in Root cultures 1 isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus. Auxin-Induced in Root cultures 1;(source:Araport11) Ipc11G0001450 AT4G12550.1 Auxin-Induced in Root cultures 1 isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus. Auxin-Induced in Root cultures 1;(source:Araport11) Ipc11G0001440 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001430 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001420 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001410 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001400 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001390 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc11G0001380 AT2G35035.1 urease accessory protein D Encodes a urease accessory protein which is essential for the activation of plant urease. urease accessory protein D;(source:Araport11) Ipc11G0001370 AT5G51460.4 0 homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc11G0001360 AT1G62660.1 Glycosyl hydrolases family 32 protein 0 Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc11G0001350 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc11G0001340 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0001330 AT5G14080.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0001320 AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc11G0001310 AT4G12420.2 Cupredoxin superfamily protein Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. Cupredoxin superfamily protein;(source:Araport11) Ipc11G0001300 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc11G0001290 AT4G04910.1 AAA-type ATPase family protein N-ethylmaleimide sensitive factor AAA-type ATPase family protein;(source:Araport11) Ipc11G0001280 AT1G53720.1 cyclophilin 59 Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cis– trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles. cyclophilin 59;(source:Araport11) Ipc11G0001270 AT1G62350.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0001260 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc11G0001250 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc11G0001240 AT1G04390.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc11G0001230 AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor expressed throughout the plant. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc11G0001220 AT4G25270.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes OTP70, a pentatricopeptide repeat protein of the E subgroup involved in splicing of the plastid transcript rpoC1. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0001210 AT4G25280.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0001200 AT5G51545.1 low psii accumulation2 Encodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II. low psii accumulation2;(source:Araport11) Ipc11G0001190 AT5G51550.1 EXORDIUM like 3 0 EXORDIUM like 3;(source:Araport11) Ipc11G0001180 AT5G62300.2 Ribosomal protein S10p/S20e family protein 0 Ribosomal protein S10p/S20e family protein;(source:Araport11) Ipc11G0001170 AT4G00100.1 ribosomal protein S13A Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development The mRNA is cell-to-cell mobile. ribosomal protein S13A;(source:Araport11) Ipc11G0001160 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0001150 AT1G12310.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc11G0001140 AT5G51570.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc11G0001120 AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Microtubule associated protein (MAP65/ASE1) family protein;(source:Araport11) Ipc11G0001110 AT2G41680.1 NADPH-dependent thioredoxin reductase C Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage. NADPH-dependent thioredoxin reductase C;(source:Araport11) Ipc11G0001100 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc11G0001090 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0001080 AT5G51670.2 0 0 hypothetical protein (DUF668);(source:Araport11) Ipc11G0001070 AT4G11990.1 Cell cycle regulated microtubule associated protein 0 Cell cycle regulated microtubule associated protein;(source:Araport11) Ipc11G0001060 AT2G07760.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0001050 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0001040 AT5G51700.1 protein binding;zinc ion binding Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation. cysteine and histidine-rich domain-containing protein RAR1;(source:Araport11) Ipc11G0001030 AT5G62190.1 DEAD box RNA helicase (PRH75) DEAD/DEAH box RNA helicase PRH75 DEAD box RNA helicase (PRH75);(source:Araport11) Ipc11G0001020 AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc11G0001010 AT5G27450.3 mevalonate kinase Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway. mevalonate kinase;(source:Araport11) Ipc11G0001000 AT3G04460.1 peroxin-12 RING finger protein involved in peroxisome biogenesis. Also involved in peroxisomal import of nitric oxide synthase. Has been demonstrated to have E3 ubiquitin ligase activity. peroxin-12;(source:Araport11) Ipc11G0000990 AT3G28890.2 receptor like protein 43 0 receptor like protein 43;(source:Araport11) Ipc11G0000980 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0000970 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0000960 AT3G25690.6 0 actin binding protein required for normal chloroplast positioningThe mRNA is cell-to-cell mobile. Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc11G0000950 AT4G25420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc11G0000940 AT5G51820.1 phosphoglucomutase Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts. phosphoglucomutase;(source:Araport11) Ipc11G0000930 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc11G0000920 AT5G51880.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc11G0000910 AT5G01710.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc11G0000900 AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0000890 AT4G25440.3 0 0 zinc finger WD40 repeat protein 1;(source:Araport11) Ipc11G0000880 AT5G62140.1 0 0 ATP-dependent Clp protease ATP-binding subunit;(source:Araport11) Ipc11G0000870 AT5G07220.1 BCL-2-associated athanogene 3 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 3;(source:Araport11) Ipc11G0000860 AT4G00750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0000850 AT5G10560.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc11G0000840 AT5G10550.1 global transcription factor group E2 This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation. global transcription factor group E2;(source:Araport11) Ipc11G0000830 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc11G0000820 AT2G37050.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0000810 AT3G57680.3 0 0 Peptidase S41 family protein;(source:Araport11) Ipc11G0000800 AT3G23860.1 GTP-binding protein-related Encodes a GTP-binding related protein that acts as a negative regulator of pollen germination, pollen tube growth, and gametophyte senescence. GTP-binding protein-like protein;(source:Araport11) Ipc11G0000790 AT3G57230.2 AGAMOUS-like 16 MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes. AGL16 can directly interact with SVP and indirectly interact with FLC. Furthermore, the accumulation of AGL16 transcripts is modulated by miR824 (AT4G24415). The flowering time effect for the miR824/AGL16 module is more obvious in the Col-FRI background than in the Col-0 background. AGL16 controls flowering via a allelic dosage effect in long-day non-vernalized conditions. AGAMOUS-like 16;(source:Araport11) Ipc11G0000780 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc11G0000770 AT1G70780.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0000760 #N/A #N/A #N/A #N/A Ipc11G0000750 AT5G37790.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000740 AT1G09700.2 0 Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin. dsRNA-binding domain-like superfamily protein;(source:Araport11) Ipc11G0000730 AT3G03440.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc11G0000720 AT2G16660.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc11G0000710 AT1G55300.1 TBP-associated factor 7 0 TBP-associated factor 7;(source:Araport11) Ipc11G0000700 AT1G66670.1 CLP protease proteolytic subunit 3 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease proteolytic subunit 3;(source:Araport11) Ipc11G0000690 AT5G38060.1 0 0 carboxypeptidase;(source:Araport11) Ipc11G0000680 AT2G01300.1 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc11G0000670 AT1G36730.1 Translation initiation factor IF2/IF5 0 Translation initiation factor IF2/IF5;(source:Araport11) Ipc11G0000660 AT1G77840.1 Translation initiation factor IF2/IF5 0 Translation initiation factor IF2/IF5;(source:Araport11) Ipc11G0000650 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc11G0000640 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0000630 AT1G51630.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0000620 AT1G66680.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein unknown function S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0000610 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0000600 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0000590 AT2G38300.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc11G0000580 AT1G51630.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0000570 AT3G21190.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0000560 AT4G18950.2 0 BHP1 is a Raf-like protein kinase involved in mediating blue light dependent stomatal opening. Integrin-linked protein kinase family;(source:Araport11) Ipc11G0000550 AT1G66730.1 DNA LIGASE 6 Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair. DNA LIGASE 6;(source:Araport11) Ipc11G0000540 AT1G60640.7 0 0 stress response protein;(source:Araport11) Ipc11G0000530 AT1G07780.9 0 Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.The mRNA is cell-to-cell mobile. phosphoribosylanthranilate isomerase 1;(source:Araport11) Ipc11G0000520 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc11G0000510 AT4G10330.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc11G0000500 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc11G0000490 AT5G16210.1 HEAT repeat-containing protein 0 HEAT repeat-containing protein;(source:Araport11) Ipc11G0000480 AT3G18280.2 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc11G0000470 AT1G66880.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000460 AT5G38210.2 0 0 Protein kinase family protein;(source:Araport11) Ipc11G0000450 AT1G66910.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000440 AT2G44920.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentapeptide-repeat protein (PRP) composed of 25 repeats capped by N- and C-terminal a-helices. Unlike other PRPs, At2g44920 consists exclusively of type II b-turns Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0000430 #N/A #N/A #N/A #N/A Ipc11G0000420 AT1G19200.1 Protein of unknown function (DUF581) 0 cyclin-dependent kinase, putative (DUF581);(source:Araport11) Ipc11G0000410 AT1G66930.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000400 AT1G66930.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000390 AT1G66910.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0000380 AT5G16180.1 ortholog of maize chloroplast splicing factor CRS1 Promotes the splicing of chloroplast group II introns. Splices atpF introns. maize chloroplast splicing factor-like protein;(source:Araport11) Ipc11G0000370 AT1G67040.1 0 0 DnaA initiator-associating protein;(source:Araport11) Ipc11G0000360 AT2G44260.1 Plant protein of unknown function (DUF946) 0 DUF946 family protein (DUF946);(source:Araport11) Ipc11G0000350 AT1G67050.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc11G0000340 AT1G67060.1 0 0 peptidase M50B-like protein;(source:Araport11) Ipc11G0000330 AT4G38650.1 Glycosyl hydrolase family 10 protein 0 Glycosyl hydrolase family 10 protein;(source:Araport11) Ipc11G0000320 AT3G02555.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0000310 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc11G0000300 AT5G25150.1 TBP-associated factor 5 Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID). TBP-associated factor 5;(source:Araport11) Ipc11G0000290 AT3G10530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0000280 AT3G02550.1 LOB domain-containing protein 41 0 LOB domain-containing protein 41;(source:Araport11) Ipc11G0000270 AT5G38450.1 cytochrome P450, family 735, subfamily A, polypeptide 1 0 cytochrome P450, family 735, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0000260 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0000250 AT1G13340.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc11G0000240 AT1G67140.3 HEAT repeat-containing protein 0 HEAT repeat-containing protein;(source:Araport11) Ipc11G0000230 AT3G02510.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc11G0000220 AT5G38510.3 0 0 Rhomboid-related intramembrane serine protease family protein;(source:Araport11) Ipc11G0000210 AT3G25770.1 allene oxide cyclase 2 Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. Note: Nomenclature for Arabidopsis allene oxide cyclase 2 (AOC2, AT3G25770) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC2 (AT3G25770) is also referred to as AOC3 in He et al. 2002 Plant Physiology, 128:876-884. The mRNA is cell-to-cell mobile. allene oxide cyclase 2;(source:Araport11) Ipc11G0000200 AT4G36790.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc11G0000190 AT2G18570.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc11G0000180 AT5G66690.1 UDP-Glycosyltransferase superfamily protein UGT72E2 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl aldehydes as well as sinapyl- and coniferyl alcohol. The enzyme is thought to be involved in lignin metabolism. A knockdown mutant line (72E2KD) was obtained using RNAi silencing. A twofold reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype. In comparison, both knockout and knockdown lines of UGT72E1 and UGT72E3, respectively, failed to display the same reduction in phenylpropanoid 4-O-glucosides. The mRNA is cell-to-cell mobile. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc11G0000170 AT2G18500.1 ovate family protein 7 0 ovate family protein 7;(source:Araport11) Ipc11G0000160 AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc11G0000150 AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0000140 AT4G36690.4 U2 snRNP auxilliary factor, large subunit, splicing factor Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65b. U2 snRNP auxilliary factor, large subunit, splicing factor;(source:Araport11) Ipc11G0000130 AT2G44310.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc11G0000120 AT5G66730.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc11G0000110 AT4G36760.1 aminopeptidase P1 Arabidopsis aminopeptidase P1 The mRNA is cell-to-cell mobile. aminopeptidase P1;(source:Araport11) Ipc11G0000100 AT3G50740.1 UDP-glucosyl transferase 72E1 UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism. UDP-glucosyl transferase 72E1;(source:Araport11) Ipc11G0000090 AT3G50740.1 UDP-glucosyl transferase 72E1 UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism. UDP-glucosyl transferase 72E1;(source:Araport11) Ipc11G0000080 AT2G18570.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc11G0000070 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc11G0000060 AT2G18470.3 0 Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4;(source:Araport11) Ipc11G0000050 AT5G40770.1 prohibitin 3 prohibitin 3 prohibitin 3;(source:Araport11) Ipc11G0000040 AT2G18460.1 like COV 3 0 like COV 3;(source:Araport11) Ipc11G0000030 AT5G66760.1 succinate dehydrogenase 1-1 One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. The mRNA is cell-to-cell mobile. succinate dehydrogenase 1-1;(source:Araport11) Ipc11G0000020 AT5G66550.1 Maf-like protein 0 Maf-like protein;(source:Araport11) Ipc11G0000010 AT3G50870.1 GATA type zinc finger transcription factor family protein Encodes a GATA transcriptional regulator required to position the proembryo boundary in the early embryo. Regulates shoot apical meristem and flower development. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc07G0015830 AT5G11880.1 Pyridoxal-dependent decarboxylase family protein Meso-diaminopimelate decarboxylase which catalyzes the decarboxylation of mesodiaminopimelate, the final reaction in the diaminopimelate L-lysine biosynthetic pathway. Pyridoxal-dependent decarboxylase family protein;(source:Araport11) Ipc07G0015820 AT1G76080.1 chloroplastic drought-induced stress protein of 32 kD Encodes a thioredoxin localized in chloroplast stroma. Known as CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD). chloroplastic drought-induced stress protein of 32 kD;(source:Araport11) Ipc07G0015810 AT5G42210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc07G0015800 AT4G35790.2 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc07G0015790 AT2G44130.1 Galactose oxidase/kelch repeat superfamily protein Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family. Component of SCF ubiquitin protein ligase, interacts with phenylalanine ammonia-lyase. AtKFB39 is a homolog of previously identified AtKFB50 (At3g59940) and specifically interacts with Arabidopsis PAL3 and PAL4 in vitro. In planta, together with AtKFB01, KFB20 and KFB50, it regulates PAL protein stability thus controlling phenylpropanoid biosynthesis . Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc07G0015780 AT1G76130.2 0 alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis. alpha-amylase-like 2;(source:Araport11) Ipc07G0015770 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc07G0015760 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc07G0015750 AT3G25430.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0015740 AT2G46370.4 Auxin-responsive GH3 family protein Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses. Auxin-responsive GH3 family protein;(source:Araport11) Ipc07G0015720 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0015730 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0015710 AT5G52920.1 plastidic pyruvate kinase beta subunit 1 encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content. The mRNA is cell-to-cell mobile. plastidic pyruvate kinase beta subunit 1;(source:Araport11) Ipc07G0015700 AT4G38430.1 rho guanyl-nucleotide exchange factor 1 Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. ropgef1 mutants have defects in auxin transport that result in abnormal development of embryos and growth defects. rho guanyl-nucleotide exchange factor 1;(source:Araport11) Ipc07G0015690 AT5G24710.1 Transducin/WD40 repeat-like superfamily protein WD40/YVTN repeat protein. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0015680 AT1G76140.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc07G0015670 AT2G20030.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0015660 AT1G20410.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc07G0015650 AT1G76160.1 SKU5 similar 5 0 SKU5 similar 5;(source:Araport11) Ipc07G0015640 AT5G42250.1 Zinc-binding alcohol dehydrogenase family protein 0 Zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc07G0015630 AT2G38010.3 0 0 Neutral/alkaline non-lysosomal ceramidase;(source:Araport11) Ipc07G0015620 AT1G20440.1 cold-regulated 47 Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant. cold-regulated 47;(source:Araport11) Ipc07G0015610 AT1G20460.1 0 0 NADH-ubiquinone oxidoreductase chain;(source:Araport11) Ipc07G0015600 AT1G47670.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc07G0015590 AT3G04710.1 ankyrin repeat family protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. ankyrin repeat family protein;(source:Araport11) Ipc07G0015570 AT1G08790.1 Protein of unknown function (DUF1685) 0 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1, putative (DUF1685);(source:Araport11) Ipc07G0015580 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0015560 AT3G60240.2 eukaryotic translation initiation factor 4G protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. eukaryotic translation initiation factor 4G;(source:Araport11) Ipc07G0015550 AT3G04650.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc07G0015540 AT1G54460.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc07G0015530 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc07G0015520 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc07G0015510 AT5G04885.2 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc07G0015500 AT1G24360.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0015490 AT5G04895.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc07G0015480 AT5G04895.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc07G0015470 #N/A #N/A #N/A #N/A Ipc07G0015460 AT5G04930.1 aminophospholipid ATPase 1 Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 1;(source:Araport11) Ipc07G0015450 AT3G10690.1 DNA GYRASE A Encodes a protein that when expressed together with GYRB2 generates an active supercoiling DNA gyrase enzyme that shares similar properties to its bacterial counterpart, including sensitivity to gyrase-specific antibiotics. DNA GYRASE A;(source:Araport11) Ipc07G0015440 AT5G58730.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc07G0015430 AT3G04060.1 NAC domain containing protein 46 NAC046 is a member of the NAC domain containing family of transcription factors. It was identified in a screen for regulators of chlorophyll protein gene expression. Mutants in NAC046 have delayed senescence and increased CHL content suggesting a role in regulation of senescence and chlorophyll degradation. NAC domain containing protein 46;(source:Araport11) Ipc07G0015420 AT3G54320.3 Integrase-type DNA-binding superfamily protein WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0015410 AT3G02530.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc07G0015400 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0015390 AT5G45610.1 protein dimerizations Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response. protein dimerization;(source:Araport11) Ipc07G0015380 AT3G62980.1 F-box/RNI-like superfamily protein Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis. F-box/RNI-like superfamily protein;(source:Araport11) Ipc07G0015370 AT5G16070.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc07G0015360 AT3G15810.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc07G0015350 AT5G65710.1 HAESA-like 2 Encodes a protein controlling the separation step of floral organ abscission.Necessary for pathogen-triggered leaf abscission. HAESA-like 2;(source:Araport11) Ipc07G0015340 AT5G36140.1 cytochrome P450, family 716, subfamily A, polypeptide 2 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively.In particular, 22alpha-hydroxylation activity has been observed against alpha-amyrin. Should be merged with At5g36130. cytochrome P450, family 716, subfamily A, polypeptide 2;(source:Araport11) Ipc07G0015330 AT1G29500.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015320 AT1G29490.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015310 AT1G29510.1 SAUR-like auxin-responsive protein family This locus was referred to as SAUR68 in PMID:17948056 but the nomenclature should be SAUR67. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015300 AT1G29420.2 0 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015290 AT1G29420.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015270 AT3G10660.2 0 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2;(source:Araport11) Ipc07G0015280 AT1G29510.1 SAUR-like auxin-responsive protein family This locus was referred to as SAUR68 in PMID:17948056 but the nomenclature should be SAUR67. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0015260 AT1G65770.1 ascorbic acid mannose pathway regulator 1 Encodes AMR1 (Ascorbic acid Mannose Pathway Regulator 1). Coordinately and negatively regulates the mannose/L-galactose ascorbic acid biosynthetic pathway in response to developmental and environmental cues. ascorbic acid mannose pathway regulator 1;(source:Araport11) Ipc07G0015250 AT3G10720.2 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0015240 AT5G04990.1 SAD1/UNC-84 domain protein 1 Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with WPP domain interacting-proteins (WIPs). It is involved in maintaining the elongated nuclear shape of epidermal cells. SAD1/UNC-84 domain protein 1;(source:Araport11) Ipc07G0015230 AT2G27040.2 Argonaute family protein AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens including Tobacco rattle virus. Argonaute family protein;(source:Araport11) Ipc07G0015220 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0015210 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0015200 AT5G14210.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0015190 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0015180 AT5G13750.1 zinc induced facilitator-like 1 0 zinc induced facilitator-like 1;(source:Araport11) Ipc07G0015170 AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0015160 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0015130 AT3G53570.4 FUS3-complementing gene 1 a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. serine/threonine-protein kinase AFC1;(source:Araport11) Ipc07G0015140 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0015150 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0015120 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc07G0015110 AT2G37440.3 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc07G0015100 AT1G80860.2 phospholipid N-methyltransferase Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine. phospholipid N-methyltransferase;(source:Araport11) Ipc07G0015090 AT5G59830.3 0 0 DNA-binding protein;(source:Araport11) Ipc07G0015080 AT5G59840.1 Ras-related small GTP-binding family protein 0 Ras-related small GTP-binding family protein;(source:Araport11) Ipc07G0015070 AT3G53630.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0015060 AT2G37480.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0015050 #N/A #N/A #N/A #N/A Ipc07G0015040 AT4G11420.1 eukaryotic translation initiation factor 3A Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits. eukaryotic translation initiation factor 3A;(source:Araport11) Ipc07G0015030 AT2G37530.1 0 0 forkhead box protein G1;(source:Araport11) Ipc07G0015020 AT5G59800.1 methyl-CPG-binding domain 7 Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing. methyl-CPG-binding domain 7;(source:Araport11) Ipc07G0015010 AT1G51172.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0015000 AT1G26820.1 ribonuclease 3 Encodes ribonuclease RNS3. ribonuclease 3;(source:Araport11) Ipc07G0014990 AT1G26820.1 ribonuclease 3 Encodes ribonuclease RNS3. ribonuclease 3;(source:Araport11) Ipc07G0014980 AT2G37550.2 ARF-GAP domain 7 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. ARF-GAP domain 7;(source:Araport11) Ipc07G0014970 AT5G02520.1 0 Arabidopsis KNL2 localizes at chromocenters during all stages of the mitotic cell cycle, except from metaphase to mid-anaphase, and its level is strictly regulated by the proteasome degradation pathway. Knockout of KNL2 via a T-DNA insertion resulted in a reduced amount of centromeric cenH3, mitotic and meiotic abnormalities, and reduced growth and fertility. dentin sialophosphoprotein-like protein;(source:Araport11) Ipc07G0014960 AT5G02520.3 0 Arabidopsis KNL2 localizes at chromocenters during all stages of the mitotic cell cycle, except from metaphase to mid-anaphase, and its level is strictly regulated by the proteasome degradation pathway. Knockout of KNL2 via a T-DNA insertion resulted in a reduced amount of centromeric cenH3, mitotic and meiotic abnormalities, and reduced growth and fertility. dentin sialophosphoprotein-like protein;(source:Araport11) Ipc07G0014950 AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding 0 DNA-BINDING TRANSCRIPTION FACTOR 2;(source:Araport11) Ipc07G0014940 AT4G03830.1 Protein of unknown function, DUF601 0 hypothetical protein (Protein of unknown function, DUF601);(source:Araport11) Ipc07G0014930 AT3G44530.2 homolog of histone chaperone HIRA Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. It is a part of the HISTONE REGULATOR complex that deposits histones in a DNA synthesis-independent manner and affects both nucleosome occupancy and the maintenance of transcriptional silencing. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2. histone chaperone HIRA-like protein;(source:Araport11) Ipc07G0014920 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc07G0014910 AT2G37585.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14C. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0014900 AT2G37590.1 DNA binding with one finger 2.4 PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. DNA binding with one finger 2.4;(source:Araport11) Ipc07G0014890 AT2G28840.1 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc07G0014880 AT5G02440.1 0 0 60S ribosomal protein L36;(source:Araport11) Ipc07G0014870 AT3G09430.1 0 0 peptide transporter family protein;(source:Araport11) Ipc07G0014860 AT2G37670.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0014850 AT5G02420.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc07G0014840 AT1G09220.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0014830 AT3G28580.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0014820 AT5G02390.3 0 Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc07G0014810 AT5G16750.1 Transducin family protein / WD-40 repeat family protein Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc07G0014800 AT5G02370.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc07G0014790 AT2G46460.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0014770 AT5G65930.1 kinesin-like calmodulin-binding protein (ZWICHEL) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. kinesin-like calmodulin-binding protein (ZWICHEL);(source:Araport11) Ipc07G0014760 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc07G0014780 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0014750 AT3G46560.1 Tim10/DDP family zinc finger protein Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM10, AtTIM9 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei. Tim10/DDP family zinc finger protein;(source:Araport11) Ipc07G0014740 AT3G09370.1 myb domain protein 3r-3 C-myb-like transcription factor (MYB3R3) mRNA. It is a target of CDK phosphorylation and blocks cell division in response to DNA damage. myb domain protein 3r-3;(source:Araport11) Ipc07G0014730 AT5G02310.3 0 Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. PRT6 has also been show to be involved in the response to pathogens. The mRNA is cell-to-cell mobile. proteolysis 6;(source:Araport11) Ipc07G0014720 AT1G07570.5 0 Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues Protein kinase superfamily protein;(source:Araport11) Ipc07G0014710 AT5G02250.1 Ribonuclease II/R family protein Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis. Ribonuclease II/R family protein;(source:Araport11) Ipc07G0014700 AT2G29050.1 RHOMBOID-like 1 0 RHOMBOID-like 1;(source:Araport11) Ipc07G0014690 AT2G37660.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0014680 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0014670 AT5G02230.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc07G0014660 AT1G07510.1 FTSH protease 10 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10;(source:Araport11) Ipc07G0014650 AT5G60020.1 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc07G0014640 AT3G09350.1 Fes1A Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro. Fes1A;(source:Araport11) Ipc07G0014630 AT5G02140.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc07G0014620 AT5G02130.1 Tetratricopeptide repeat (TPR)-like superfamily protein SSR1 encodes a tetratricopeptide repeat- containing protein localized in mitochondria. It is involved in root development, possibly by through effects on auxin transport. In ssr1 mutants, the expression PIN genes and trafficking of PIN2 is altered which in turn affects distribution of auxin in the roots. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0014610 AT5G02120.1 one helix protein Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. The mRNA is cell-to-cell mobile. one helix protein;(source:Araport11) Ipc07G0014600 AT5G02110.1 CYCLIN D7;1 Encodes CYCLIN D7;1. Overexpression of CYCD7;1 induces cell proliferation and cell enlargement in the embryo and endosperm leading to overgrowth. CYCLIN D7;(source:Araport11) Ipc07G0014590 AT2G37680.2 0 0 glucose-induced degradation-like protein;(source:Araport11) Ipc07G0014580 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc07G0014570 AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc07G0014560 AT2G39730.2 rubisco activase Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. Involved in jasmonate-induced leaf senescence. rubisco activase;(source:Araport11) Ipc07G0014550 AT5G51670.2 0 0 hypothetical protein (DUF668);(source:Araport11) Ipc07G0014540 AT2G37730.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc07G0014530 AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc07G0014520 AT2G29350.1 senescence-associated gene 13 senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase senescence-associated gene 13;(source:Araport11) Ipc07G0014510 AT5G02090.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0014500 AT3G53850.2 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc07G0014490 AT2G37770.2 NAD(P)-linked oxidoreductase superfamily protein Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress. NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc07G0014470 AT5G54360.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc07G0014480 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc07G0014460 AT3G53900.1 uracil phosphoribosyltransferase Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders. uracil phosphoribosyltransferase;(source:Araport11) Ipc07G0014450 AT5G05987.1 prenylated RAB acceptor 1.A2 0 prenylated RAB acceptor 1.A2;(source:Araport11) Ipc07G0014440 AT2G37860.4 0 Encodes a protein involved in differential development of bundle sheath and mesophyll cell chloroplasts. reticulata-like protein, putative (DUF3411);(source:Araport11) Ipc07G0014430 AT2G37880.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc07G0014420 AT3G53940.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0014410 AT3G53950.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc07G0014400 AT2G37900.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc07G0014390 AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc07G0014380 AT1G80660.2 H(+)-ATPase 9 0 H[+]-ATPase 9;(source:Araport11) Ipc07G0014370 AT3G53980.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0014360 AT5G02010.1 RHO guanyl-nucleotide exchange factor 7 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Involved in cell wall patterning. Encodes ROP activator, regulates the formation of ROP-activated domains; these in turn determine the pattern of cell wall pits. Required for periodic formation of secondary cell wall pits. RHO guanyl-nucleotide exchange factor 7;(source:Araport11) Ipc07G0014350 AT3G09270.1 glutathione S-transferase TAU 8 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 8;(source:Araport11) Ipc07G0014340 AT3G09270.1 glutathione S-transferase TAU 8 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 8;(source:Araport11) Ipc07G0014330 AT5G63260.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc07G0014320 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc07G0014310 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc07G0014300 AT3G09270.1 glutathione S-transferase TAU 8 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 8;(source:Araport11) Ipc07G0014290 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc07G0014280 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0014270 AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein Encodes universal stress protein (USP). Functions as a molecular chaperone under heat shock and oxidative stress conditions. Chaperone activity and assembly into complexes is redox regulated. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc07G0014260 AT2G37925.1 copper transporter 4 encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast copper transporter 4;(source:Araport11) Ipc07G0014250 AT5G01030.3 0 0 enolase, putative (DUF3527);(source:Araport11) Ipc07G0014240 AT3G17300.3 0 0 COMPLEX 1 LYR-like protein;(source:Araport11) Ipc07G0014230 AT3G54020.1 Arabidopsis Inositol phosphorylceramide synthase 1 Inositol phosphorylceramide synthase Inositol phosphorylceramide synthase 1;(source:Araport11) Ipc07G0014220 AT3G54030.1 Protein kinase protein with tetratricopeptide repeat domain 0 kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc07G0014210 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc07G0014200 AT3G09220.1 laccase 7 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 7;(source:Araport11) Ipc07G0014190 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc07G0014180 AT3G54050.2 high cyclic electron flow 1 Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis. The mRNA is cell-to-cell mobile. high cyclic electron flow 1;(source:Araport11) Ipc07G0014170 AT1G78640.1 0 0 B3 domain protein;(source:Araport11) Ipc07G0014160 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc07G0014150 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc07G0014140 AT2G37980.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc07G0014130 AT3G09120.1 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc07G0014120 AT3G09120.1 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc07G0014110 AT3G54110.1 plant uncoupling mitochondrial protein 1 Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate. The mRNA is cell-to-cell mobile. plant uncoupling mitochondrial protein 1;(source:Araport11) Ipc07G0014100 AT3G22220.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc07G0014090 AT3G54130.1 Josephin family protein 0 Josephin family protein;(source:Araport11) Ipc07G0014080 AT3G09100.2 mRNA capping enzyme family protein 0 mRNA capping enzyme family protein;(source:Araport11) Ipc07G0014070 AT3G09090.1 defective in exine formation protein (DEX1) Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development. defective in exine formation protein (DEX1);(source:Araport11) Ipc07G0014060 AT3G09085.1 Protein of unknown function (DUF962) 0 transmembrane protein (DUF962);(source:Araport11) Ipc07G0014050 AT2G24580.1 FAD-dependent oxidoreductase family protein 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc07G0014040 AT5G54390.1 HAL2-like Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. The mRNA is cell-to-cell mobile. HAL2-like protein;(source:Araport11) Ipc07G0014030 AT3G09070.1 Protein of unknown function (DUF740) Encodes a polarly localised membrane-associated protein that regulates phloem differentiation entry. LOW protein: UPF0503-like protein, putative (DUF740);(source:Araport11) Ipc07G0014020 AT5G44430.1 plant defensin 1.2C Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. plant defensin 1.2C;(source:Araport11) Ipc07G0014010 AT5G04110.2 0 0 DNA GYRASE B3;(source:Araport11) Ipc07G0014000 AT5G01180.3 0 Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane. peptide transporter 5;(source:Araport11) Ipc07G0013990 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc07G0013980 AT2G38090.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc07G0013970 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) Ipc07G0013960 AT3G14110.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0013950 AT1G07300.2 0 0 josephin protein-like protein;(source:Araport11) Ipc07G0013940 AT5G01230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a tRNA methyltransferase that mediates the 2'-O-ribose methylation of selected tRNA species in the anticodon loop. Mutation of this gene compromises plant immunity against bacteria. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0013930 AT2G38100.2 0 Encodes a nitrate transporter that is involved in nitrogen accumulation in embryos. proton-dependent oligopeptide transport (POT) family protein;(source:Araport11) Ipc07G0013920 AT3G09030.1 BTB/POZ domain-containing protein EAP3 is a cytolsolic BTB/POZ-domain protein involved in trafficking of PEN3. BTB/POZ domain-containing protein;(source:Araport11) Ipc07G0013910 AT2G38120.1 Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc07G0013900 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc07G0013890 AT5G01260.2 Carbohydrate-binding-like fold 0 Carbohydrate-binding-like fold;(source:Araport11) Ipc07G0013880 AT5G01270.1 carboxyl-terminal domain (ctd) phosphatase-like 2 Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. carboxyl-terminal domain (ctd) phosphatase-like 2;(source:Araport11) Ipc07G0013870 AT2G40060.1 Clathrin light chain protein Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. The mRNA is cell-to-cell mobile. Clathrin light chain protein;(source:Araport11) Ipc07G0013860 AT3G09010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0013850 AT3G08990.3 0 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc07G0013840 AT5G61920.6 0 0 FLX-like protein;(source:Araport11) Ipc07G0013830 AT5G01520.1 RING/U-box superfamily protein Encodes a cytosolic RING-type E3 ubiquitin (Ub) ligase that is critical for ABA and high salinity responses during germination. AtAIRP2 and SDIR1 likely play a combinatory role in ABA signaling and the response to high salt in Arabidopsis. RING/U-box superfamily protein;(source:Araport11) Ipc07G0013820 AT5G01510.1 Protein of unknown function, DUF647 0 root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11) Ipc07G0013810 AT3G51860.1 cation exchanger 3 0 cation exchanger 3;(source:Araport11) Ipc07G0013800 AT3G11210.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc07G0013790 AT5G01460.1 LMBR1-like membrane protein 0 LMBR1-like membrane protein;(source:Araport11) Ipc07G0013780 AT3G08510.2 phospholipase C 2 Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol. It is involved in auxin biosynthesis and signaling, modulating development of both male and female gametophytes. It also regulates MAMP-triggered immunity by modulating ROS production. phospholipase C 2;(source:Araport11) Ipc07G0013770 AT3G08920.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc07G0013760 AT5G05610.2 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 1;(source:Araport11) Ipc07G0013750 AT5G01380.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc07G0013740 AT2G07705.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0013730 AT5G01370.1 ALC-interacting protein 1 Nuclear protein with a lysine-rich domain and a C-terminal serine-rich domain. Interacts with Alcatraz (ALC). ACI1 is mainly expressed in the vascular system. Involved in cell separation during fruit dehiscence. ALC-interacting protein 1;(source:Araport11) Ipc07G0013720 AT3G51840.1 acyl-CoA oxidase 4 Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis. acyl-CoA oxidase 4;(source:Araport11) Ipc07G0013710 AT2G38280.2 AMP deaminase, putative / myoadenylate deaminase, putative Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage. AMP deaminase, putative / myoadenylate deaminase;(source:Araport11) Ipc07G0013700 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013690 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc07G0013680 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013670 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013660 AT1G79670.2 Wall-associated kinase family protein Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races. Wall-associated kinase family protein;(source:Araport11) Ipc07G0013650 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013640 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013630 AT3G23300.2 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0013620 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc07G0013610 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013600 AT1G21230.1 wall associated kinase 5 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 5;(source:Araport11) Ipc07G0013590 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013580 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013570 AT1G79680.1 WALL ASSOCIATED KINASE (WAK)-LIKE 10 Encodes a twin-domain, kinase-GC signaling molecule that may function in biotic stress responses that is critically dependent on the second messenger cGMP. WALL ASSOCIATED KINASE (WAK)-LIKE 10;(source:Araport11) Ipc07G0013560 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc07G0013550 AT1G16120.1 wall associated kinase-like 1 Encodes a WAK-like receptor-like kinase with a cytoplasmic Ser/Thr protein kinase domain and an extracellular domain with EGF-like repeats. wall associated kinase-like 1;(source:Araport11) Ipc07G0013540 AT5G01340.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0013530 AT5G51980.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0013520 AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc07G0013510 AT5G01310.1 APRATAXIN-like Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro. APRATAXIN-like protein;(source:Araport11) Ipc07G0013500 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc07G0013490 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc07G0013480 AT1G47890.1 receptor like protein 7 0 receptor like protein 7;(source:Araport11) Ipc07G0013470 AT5G01305.1 0 Encodes a bHLH protein that modulates axillary meristem formation in conjunction with RAX1 and LAS. transcription factor bHLH140-like protein;(source:Araport11) Ipc07G0013460 AT1G47980.1 0 0 desiccation-like protein;(source:Araport11) Ipc07G0013450 AT2G21100.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc07G0013440 AT1G28960.7 0 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 15;(source:Araport11) Ipc07G0013430 AT2G38300.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc07G0013420 AT3G44713.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0013410 AT1G19490.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc07G0013400 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0013390 AT3G51760.4 Protein of unknown function (DUF688) 0 hypothetical protein (DUF688);(source:Araport11) Ipc07G0013380 AT4G08250.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc07G0013370 AT2G40300.1 ferritin 4 Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress. ferritin 4;(source:Araport11) Ipc07G0013360 AT2G40300.1 ferritin 4 Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress. ferritin 4;(source:Araport11) Ipc07G0013350 AT3G08890.2 Protein of unknown function, DUF538 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc07G0013340 AT2G38310.1 PYR1-like 4 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. The mRNA is cell-to-cell mobile. PYR1-like 4;(source:Araport11) Ipc07G0013330 AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) Required for proper proliferation of basal cells. valyl-tRNA synthetase / valine-tRNA ligase (VALRS);(source:Araport11) Ipc07G0013320 AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) Required for proper proliferation of basal cells. valyl-tRNA synthetase / valine-tRNA ligase (VALRS);(source:Araport11) Ipc07G0013310 AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) Required for proper proliferation of basal cells. valyl-tRNA synthetase / valine-tRNA ligase (VALRS);(source:Araport11) Ipc07G0013300 AT2G38320.1 TRICHOME BIREFRINGENCE-LIKE 34 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL34 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. This biochemical phenotype can be observed in tbl34 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 34;(source:Araport11) Ipc07G0013290 AT2G38320.1 TRICHOME BIREFRINGENCE-LIKE 34 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL34 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. This biochemical phenotype can be observed in tbl34 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 34;(source:Araport11) Ipc07G0013280 AT5G01620.2 TRICHOME BIREFRINGENCE-LIKE 35 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL35 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. The biochemical phenotype can be observed in tbl35 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 35;(source:Araport11) Ipc07G0013270 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc07G0013260 AT2G38330.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc07G0013250 AT2G40340.1 Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0013240 #N/A #N/A #N/A #N/A Ipc07G0013230 AT3G08780.1 0 0 BRISC complex subunit Abro1-like protein;(source:Araport11) Ipc07G0013220 AT3G51740.1 inflorescence meristem receptor-like kinase 2 encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. The mRNA is cell-to-cell mobile. inflorescence meristem receptor-like kinase 2;(source:Araport11) Ipc07G0013210 AT2G38360.1 prenylated RAB acceptor 1.B4 0 prenylated RAB acceptor 1.B4;(source:Araport11) Ipc07G0013200 AT3G51660.1 Tautomerase/MIF superfamily protein 0 Tautomerase/MIF superfamily protein;(source:Araport11) Ipc07G0013190 AT3G51660.1 Tautomerase/MIF superfamily protein 0 Tautomerase/MIF superfamily protein;(source:Araport11) Ipc07G0013180 AT3G51670.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells. SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc07G0013170 AT5G01670.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc07G0013160 AT3G02750.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc07G0013150 AT5G01710.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc07G0013140 AT1G72100.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 0 late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11) Ipc07G0013130 AT2G38480.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc07G0013120 AT2G38470.1 WRKY DNA-binding protein 33 Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. WRKY DNA-binding protein 33;(source:Araport11) Ipc07G0013110 AT5G01720.1 RNI-like superfamily protein RAE1 is an F-box protein component of a SCF-type E3 ligase complex. It is part of an alumium induced regulatory loop: its activity is induced by STOP1 and it in turn ubiquitinates STOP1 which is then targeted for degradation. RNI-like superfamily protein;(source:Araport11) Ipc07G0013100 AT5G03570.2 iron regulated 2 Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals. iron regulated 2;(source:Araport11) Ipc07G0013090 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0013080 AT5G01740.1 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc07G0013070 AT2G38410.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc07G0013060 AT3G08850.1 HEAT repeat ;WD domain, G-beta repeat protein protein Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. Regulatory-associated protein of TOR 1;(source:Araport11) Ipc07G0013050 AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein 0 2-oxoglutarate-dependent dioxygenase family protein;(source:Araport11) Ipc07G0013040 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc07G0013030 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc07G0013020 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc07G0013010 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc07G0013000 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc07G0012990 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0012980 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc07G0012970 AT2G38370.1 Plant protein of unknown function (DUF827) 0 weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc07G0012960 AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc07G0012950 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc07G0012940 AT3G51640.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc07G0012930 AT5G01820.1 serine/threonine protein kinase 1 Encodes a CBL-interacting serine/threonine protein kinase. serine/threonine protein kinase 1;(source:Araport11) Ipc07G0012920 AT5G03280.1 NRAMP metal ion transporter family protein Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence. A maternally expressed imprinted gene. Mutations in ein2 block ethylene stimulation of flavonol synthesis. The mRNA is cell-to-cell mobile. NRAMP metal ion transporter family protein;(source:Araport11) Ipc07G0012910 AT2G30400.1 ovate family protein 2 0 ovate family protein 2;(source:Araport11) Ipc07G0012900 AT3G51630.2 with no lysine (K) kinase 5 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. with no lysine (K) kinase 5;(source:Araport11) Ipc07G0012890 AT3G51620.3 0 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc07G0012880 AT2G38510.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc07G0012870 AT5G01850.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0012860 AT1G29690.1 MAC/Perforin domain-containing protein Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity. MAC/Perforin domain-containing protein;(source:Araport11) Ipc07G0012850 AT5G05290.1 expansin A2 Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A2;(source:Araport11) Ipc07G0012840 AT5G59320.1 lipid transfer protein 3 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 3;(source:Araport11) Ipc07G0012830 AT5G59320.1 lipid transfer protein 3 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 3;(source:Araport11) Ipc07G0012800 AT5G59320.1 lipid transfer protein 3 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 3;(source:Araport11) Ipc07G0012820 AT3G51590.1 lipid transfer protein 12 Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 12;(source:Araport11) Ipc07G0012810 AT2G22410.1 SLOW GROWTH 1 0 SLOW GROWTH 1;(source:Araport11) Ipc07G0012790 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc07G0012780 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc07G0012770 AT3G08760.3 0 Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants. Protein kinase superfamily protein;(source:Araport11) Ipc07G0012760 AT3G08740.1 elongation factor P (EF-P) family protein 0 elongation factor P (EF-P) family protein;(source:Araport11) Ipc07G0012750 AT3G56370.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0012740 AT2G38550.1 Transmembrane proteins 14C 0 Transmembrane proteins 14C;(source:Araport11) Ipc07G0012730 AT3G52850.1 vacuolar sorting receptor homolog 1 Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles. The mRNA is cell-to-cell mobile. vacuolar sorting receptor homolog 1;(source:Araport11) Ipc07G0012720 AT1G61670.2 0 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc07G0012710 AT5G43180.1 Protein of unknown function, DUF599 0 transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc07G0012700 AT3G56400.1 WRKY DNA-binding protein 70 Member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. WRKY DNA-binding protein 70;(source:Araport11) Ipc07G0012690 AT5G04930.1 aminophospholipid ATPase 1 Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 1;(source:Araport11) Ipc07G0012680 AT5G01910.1 0 0 myelin transcription factor;(source:Araport11) Ipc07G0012670 AT5G01920.2 0 Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. Protein kinase superfamily protein;(source:Araport11) Ipc07G0012660 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc07G0012650 AT3G08710.3 0 Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication. thioredoxin H-type 9;(source:Araport11) Ipc07G0012640 AT1G22540.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc07G0012630 AT2G38580.3 0 0 Mitochondrial ATP synthase D chain-related protein;(source:Araport11) Ipc07G0012620 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0012610 AT3G08670.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc07G0012600 AT2G38600.2 0 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc07G0012590 AT4G11150.1 vacuolar ATP synthase subunit E1 Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit E1;(source:Araport11) Ipc07G0012580 AT3G08570.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc07G0012570 AT1G32070.3 nuclear shuttle interacting Encodes a acetyltransferase (NSI) that is localized in the nucleus and chloroplast. It interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. In the chloroplast NSI functions in the dynamic reorganization thylakoid membrane complexes. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.Mutants have reduced melatonin and anthocyanin levels and do not accumulate the PSI-LHCII state transition complex. nuclear shuttle interacting;(source:Araport11) Ipc07G0012560 AT3G08640.1 Protein of unknown function (DUF3411) 0 alphavirus core family protein (DUF3411);(source:Araport11) Ipc07G0012550 AT5G01960.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0012540 AT5G01970.1 0 0 unknown protein;(source:TAIR10) Ipc07G0012530 AT1G20670.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc07G0012520 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0012510 AT5G01990.1 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc07G0012500 AT4G20780.1 calmodulin like 42 Calcium sensor involved in trichome branching. calmodulin like 42;(source:Araport11) Ipc07G0012490 AT3G54190.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0012480 AT1G80120.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc07G0012470 AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1 Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. phosphorylethanolamine cytidylyltransferase 1;(source:Araport11) Ipc07G0012460 AT5G01010.1 0 0 retinal-binding protein;(source:Araport11) Ipc07G0012450 AT2G38650.2 galacturonosyltransferase 7 0 galacturonosyltransferase 7;(source:Araport11) Ipc07G0012440 AT4G10180.1 light-mediated development protein 1 / deetiolated1 (DET1) Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling. The mRNA is cell-to-cell mobile. light-mediated development protein 1 / deetiolated1 (DET1);(source:Araport11) Ipc07G0012430 AT4G38040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0012420 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc07G0012410 AT5G17920.2 Cobalamin-independent synthase family protein Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. Cobalamin-independent synthase family protein;(source:Araport11) Ipc07G0012400 AT5G13530.1 protein kinases;ubiquitin-protein ligases Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. protein kinases;(source:Araport11) Ipc07G0012390 AT3G10430.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0012380 #N/A #N/A #N/A #N/A Ipc07G0012370 AT1G08810.1 myb domain protein 60 putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought. myb domain protein 60;(source:Araport11) Ipc07G0012360 AT3G03720.1 cationic amino acid transporter 4 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. cationic amino acid transporter 4;(source:Araport11) Ipc07G0012350 AT1G58030.1 cationic amino acid transporter 2 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast. cationic amino acid transporter 2;(source:Araport11) Ipc07G0012340 AT1G76650.3 calmodulin-like 38 0 calmodulin-like 38;(source:Araport11) Ipc07G0012330 AT5G17770.1 NADH:cytochrome B5 reductase 1 Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor. NADH:cytochrome B5 reductase 1;(source:Araport11) Ipc07G0012320 AT3G45400.1 exostosin family protein 0 exostosin family protein;(source:Araport11) Ipc07G0012310 AT5G27740.1 ATPase family associated with various cellular activities (AAA) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. ATPase family associated with various cellular activities (AAA);(source:Araport11) Ipc07G0012300 AT3G10430.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0012290 AT3G03750.2 SET domain protein 20 0 SET domain protein 20;(source:Araport11) Ipc07G0012280 AT3G03770.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0012270 AT5G15120.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc07G0012260 AT2G36900.1 membrin 11 member of Membrin Gene Family membrin 11;(source:Araport11) Ipc07G0012250 AT5G35910.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product. Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11) Ipc07G0012240 AT5G06600.2 ubiquitin-specific protease 12 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 12;(source:Araport11) Ipc07G0012230 AT3G03940.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Also acts in GA response pathway along with RGA1/CCA1. Protein kinase family protein;(source:Araport11) Ipc07G0012220 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0012210 AT5G18200.1 UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases encodes an adenylyltransferase putative galactose-1-phosphate uridyltransferase;(source:Araport11) Ipc07G0012200 AT3G08980.4 0 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc07G0012190 AT3G13460.1 evolutionarily conserved C-terminal region 2 Physically interacts with CIPK1. evolutionarily conserved C-terminal region 2;(source:Araport11) Ipc07G0012180 AT3G03960.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc07G0012170 AT1G64770.1 NDH-dependent cyclic electron flow 1 encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. NDH-dependent cyclic electron flow 1;(source:Araport11) Ipc07G0012160 AT3G12685.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc07G0012150 AT1G54385.3 0 At1G54385 encodes the plant KASH protein SINE1; SINE1 interacts with SUN1 and SUN2, is colocalized with F-actin, and is localized at the nuclear envelope. ARM repeat superfamily protein;(source:Araport11) Ipc07G0012140 AT1G55520.4 0 TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex. TATA binding protein 2;(source:Araport11) Ipc07G0012130 AT5G18230.1 transcription regulator NOT2/NOT3/NOT5 family protein 0 transcription regulator NOT2/NOT3/NOT5 family protein;(source:Araport11) Ipc07G0012120 AT1G64760.2 O-Glycosyl hydrolases family 17 protein ZERZAUST is an atypical β-1,3 glucanase. The protein is localized to punctate regions of the apoplast, near cellular junctions. Mutants display aberrant floral morphology and twisted siliques and stems. Biochemcial analysis of mutant cell wall composition indicates cell wall defects. O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc07G0012110 AT2G46520.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative 0 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter;(source:Araport11) Ipc07G0012100 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc07G0012090 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc07G0012080 AT1G08570.1 atypical CYS HIS rich thioredoxin 4 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. The mRNA is cell-to-cell mobile. atypical CYS HIS rich thioredoxin 4;(source:Araport11) Ipc07G0012070 AT2G39050.1 hydroxyproline-rich glycoprotein family protein Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0012060 AT1G28760.1 Uncharacterized conserved protein (DUF2215) Encodes an orthlog of the Xenopus inner nuclear membrane (INM) protein Nemp1/TMEM194A. guanosine-3,5-bis (diphosphate) 3-pyrophosphohydrolase, putative (DUF2215);(source:Araport11) Ipc07G0012050 AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc07G0012040 AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Encodes a m-type thioredoxin (Trx-m1) localized in chloroplast stroma. C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc07G0012030 AT2G41050.3 0 0 PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) Ipc07G0012020 AT2G41060.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0012010 AT3G56850.1 ABA-responsive element binding protein 3 Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation. ABA-responsive element binding protein 3;(source:Araport11) Ipc07G0012000 AT3G56490.1 HIS triad family protein 3 Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro. HIS triad family protein 3;(source:Araport11) Ipc07G0011990 AT3G56820.1 0 0 RmlC-type cupin;(source:Araport11) Ipc07G0011980 AT5G13750.1 zinc induced facilitator-like 1 0 zinc induced facilitator-like 1;(source:Araport11) Ipc07G0011970 AT5G65180.1 ENTH/VHS family protein 0 ENTH/VHS family protein;(source:Araport11) Ipc07G0011960 AT3G46720.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0011950 AT3G03610.3 0 0 ELMO/CED-12 family protein;(source:Araport11) Ipc07G0011940 AT5G17700.2 0 0 MATE efflux family protein;(source:Araport11) Ipc07G0011930 AT5G17710.3 0 Chloroplast GrpE protein involved in chloroplastic response to heat stress and the correct oligomerization of the photosynthesis-related LHCII complex. Co-chaperone GrpE family protein;(source:Araport11) Ipc07G0011920 AT1G08680.1 ARF GAP-like zinc finger-containing protein ZIGA4 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15. ARF GAP-like zinc finger-containing protein ZIGA4;(source:Araport11) Ipc07G0011910 AT2G41000.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc07G0011900 AT4G18590.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0011890 AT4G38650.1 Glycosyl hydrolase family 10 protein 0 Glycosyl hydrolase family 10 protein;(source:Araport11) Ipc07G0011880 AT1G69560.1 myb domain protein 105 Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780). myb domain protein 105;(source:Araport11) Ipc07G0011870 AT5G21090.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc07G0011860 AT3G43810.1 calmodulin 7 EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant. calmodulin 7;(source:Araport11) Ipc07G0011850 AT5G05080.4 0 0 ubiquitin-conjugating enzyme 22;(source:Araport11) Ipc07G0011840 AT2G40980.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0011830 AT2G44020.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc07G0011820 AT2G40840.1 disproportionating enzyme 2 Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose. The mRNA is cell-to-cell mobile. disproportionating enzyme 2;(source:Araport11) Ipc07G0011810 AT2G40840.1 disproportionating enzyme 2 Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of β-maltose. The mRNA is cell-to-cell mobile. disproportionating enzyme 2;(source:Araport11) Ipc07G0011800 AT3G56880.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc07G0011790 AT5G06120.5 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc07G0011780 AT5G64270.1 splicing factor, putative 0 splicing factor;(source:Araport11) Ipc07G0011770 AT3G60290.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc07G0011760 AT4G34700.1 LYR family of Fe/S cluster biogenesis protein Encodes the B22 subunit of eukaryotic mitochondrial Complex I. Mutation in the gene display pleiotropic phenotypes including shorter roots, smaller plants and delayed flowering. The mRNA is cell-to-cell mobile. LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc07G0011750 AT3G10740.3 0 Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification. alpha-L-arabinofuranosidase 1;(source:Araport11) Ipc07G0011740 AT3G12280.2 retinoblastoma-related 1 Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA. Functions as a positive regulator of the developmental switch from embryonic heterotrophic growth to autotrophic growth.ChIP studies indicate that one class of targets of RBR1 are transposable elements. retinoblastoma-related 1;(source:Araport11) Ipc07G0011730 AT5G05070.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc07G0011720 AT3G56930.1 DHHC-type zinc finger family protein Protein S-acyl transferase 4 (PAT4). Mutants display defects in root hair elongation. Along with SCN1 , it may be involved in targeting of ROP2 to the plasma membrane. DHHC-type zinc finger family protein;(source:Araport11) Ipc07G0011710 AT2G27020.1 20S proteasome alpha subunit G1 Encodes 20S proteasome alpha 7 subunit PAG1. 20S proteasome alpha subunit G1;(source:Araport11) Ipc07G0011700 AT1G66140.1 zinc finger protein 4 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 4;(source:Araport11) Ipc07G0011690 AT3G12490.2 cystatin B Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress). cystatin B;(source:Araport11) Ipc07G0011680 AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc07G0011670 AT5G07050.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0011660 AT3G08890.2 Protein of unknown function, DUF538 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc07G0011650 AT3G56630.1 cytochrome P450, family 94, subfamily D, polypeptide 2 member of CYP94D cytochrome P450, family 94, subfamily D, polypeptide 2;(source:Araport11) Ipc07G0011640 AT3G56650.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc07G0011630 AT2G40950.1 Basic-leucine zipper (bZIP) transcription factor family protein bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment. It is cleaved by S2P to allow translocation to the nucleus. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc07G0011620 AT4G36945.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc07G0011610 AT5G04920.1 EAP30/Vps36 family protein 0 EAP30/Vps36 family protein;(source:Araport11) Ipc07G0011600 AT2G02990.1 ribonuclease 1 Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. ribonuclease 1;(source:Araport11) Ipc07G0011590 AT3G56680.1 Single-stranded nucleic acid binding R3H protein 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc07G0011580 AT3G10760.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc07G0011570 AT4G27220.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0011560 AT1G51480.1 Disease resistance protein (CC-NBS-LRR class) family 0 disease resistance protein (CC-NBS-LRR class) family protein;(source:Araport11) Ipc07G0011550 AT5G05140.1 Transcription elongation factor (TFIIS) family protein 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc07G0011540 AT4G09550.2 0 Encodes a gamma-tubulin complex protein that plays a role in gamma-tubulin complex localization, spindle stability and chromosomal segregation. AtGCP3 interacting protein 1;(source:Araport11) Ipc07G0011530 AT5G12235.1 CLAVATA3/ESR-RELATED 22 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 22;(source:Araport11) Ipc07G0011520 AT2G26800.5 0 Mutant has increased seed ile, leu and val as well as his and arg. Aldolase superfamily protein;(source:Araport11) Ipc07G0011510 AT3G55290.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0011500 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc07G0011490 AT1G73590.1 Auxin efflux carrier family protein Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. Auxin efflux carrier family protein;(source:Araport11) Ipc07G0011480 AT2G41140.1 CDPK-related kinase 1 Encodes CDPK-related kinase 1 (CRK1). CDPK-related kinase 1;(source:Araport11) Ipc07G0011470 AT3G56750.1 0 0 plant/protein;(source:Araport11) Ipc07G0011460 AT4G18593.2 0 0 dual specificity protein phosphatase-like protein;(source:Araport11) Ipc07G0011450 AT2G32560.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0011440 AT3G56720.2 0 0 pre-mRNA-splicing factor;(source:Araport11) Ipc07G0011430 AT1G80270.5 0 0 PENTATRICOPEPTIDE REPEAT 596;(source:Araport11) Ipc07G0011420 AT5G04130.1 DNA GYRASE B2 Encodes a protein that when expressed together with GYRA generates an active supercoiling DNA gyrase enzyme that shares similar properties to its bacterial counterpart, including sensitivity to gyrase-specific antibiotics. DNA GYRASE B2;(source:Araport11) Ipc07G0011410 AT5G03415.1 Transcription factor DP Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. Transcription factor DP;(source:Araport11) Ipc07G0011400 AT2G41180.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc07G0011390 AT2G43810.3 0 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc07G0011380 AT2G41190.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc07G0011370 AT2G23200.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0011360 AT2G41200.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0011350 AT3G56960.2 0 Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. phosphatidyl inositol monophosphate 5 kinase 4;(source:Araport11) Ipc07G0011340 AT5G03570.2 iron regulated 2 Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals. iron regulated 2;(source:Araport11) Ipc07G0011330 AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a member of the basic helix-loop-helix transcription factor family protein. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0011320 AT3G57000.1 nucleolar essential protein-related 0 nucleolar essential protein-like protein;(source:Araport11) Ipc07G0011310 AT1G44350.1 IAA-leucine resistant (ILR)-like gene 6 encodes a protein similar to IAA amino acid conjugate hydrolase. IAA-amino acid hydrolase ILR1-like 6;(source:Araport11) Ipc07G0011300 AT3G10180.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0011290 AT2G41290.1 strictosidine synthase-like 2 Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. strictosidine synthase-like 2;(source:Araport11) Ipc07G0011280 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc07G0011270 AT3G57060.3 0 0 binding protein;(source:Araport11) Ipc07G0011260 AT1G05970.2 RNA-binding (RRM/RBD/RNP motifs) family protein Anti-silencing factor. Forms a complex with ASI1-EDM2 that is required for expression of some nonintronic HC-TRE genes RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0011250 AT1G05970.2 RNA-binding (RRM/RBD/RNP motifs) family protein Anti-silencing factor. Forms a complex with ASI1-EDM2 that is required for expression of some nonintronic HC-TRE genes RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0011240 AT3G57070.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc07G0011230 AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc07G0011220 AT2G41350.1 0 Encodes AUG1, likely to be in an augmin-like complex with AUG3. HAUS augmin-like complex subunit;(source:Araport11) Ipc07G0011210 AT5G05260.2 0 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc07G0011200 AT5G35917.1 cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene a pseudogene with cytochrome P450 domain cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene;(source:Araport11) Ipc07G0011190 AT5G05260.1 cytochrome p450 79a2 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc07G0011180 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc07G0011170 AT2G41380.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0011160 AT2G41380.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0011150 AT3G44700.2 0 0 transmembrane protein;(source:Araport11) Ipc07G0011140 AT3G47930.1 L-galactono-1,4-lactone dehydrogenase L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis L-galactono-1,4-lactone dehydrogenase;(source:Araport11) Ipc07G0011130 AT2G41370.1 Ankyrin repeat family protein / BTB/POZ domain-containing protein Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. BOP2 is expressed in valve margin. Misexpression in stems causes short internodes and ectopic biosynthesis of lignin. BOP2 activity is antagonistic to BP (At4g08150) and PNY (At5g02030). BOP3 expression is restricted to pedicel axils by BP and PNY. BOP2 promotes KNAT6 (At1g23380) expression. Ankyrin repeat family protein / BTB/POZ domain-containing protein;(source:Araport11) Ipc07G0011120 AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0011110 AT3G60360.1 embryo sac development arrest 14 0 embryo sac development arrest 14;(source:Araport11) Ipc07G0011100 AT3G10190.1 Calcium-binding EF-hand family protein Encodes a protein with sequence similarity to calmodulins. Loss of function mutations have decreased response to chitin elicitors suggesting a role in plant response to fungal pathogens. Calcium-binding EF-hand family protein;(source:Araport11) Ipc07G0011090 AT5G04040.2 0 Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. Patatin-like phospholipase family protein;(source:Araport11) Ipc07G0011080 AT5G04020.2 0 0 calmodulin binding protein;(source:Araport11) Ipc07G0011070 AT1G74670.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc07G0011060 AT3G11750.1 Dihydroneopterin aldolase Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo. Dihydroneopterin aldolase;(source:Araport11) Ipc07G0011050 AT5G04010.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0011040 AT1G80600.1 HOPW1-1-interacting 1 Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). Mediates red-light inhibition of seed germination. HOPW1-1-interacting 1;(source:Araport11) Ipc07G0011030 AT2G41451.1 0 0 glycosyltransferase-like protein;(source:Araport11) Ipc07G0011020 AT2G41490.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase UDP-glcnac-adolichol phosphate glcnac-1-p-transferase;(source:Araport11) Ipc07G0011010 AT2G41500.2 0 Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells. WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein;(source:Araport11) Ipc07G0011000 AT3G46940.2 0 0 DUTP-PYROPHOSPHATASE-LIKE 1;(source:Araport11) Ipc07G0010990 AT5G03960.1 IQ-domain 12 0 IQ-domain 12;(source:Araport11) Ipc07G0010980 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc07G0010970 AT3G10140.1 RECA homolog 3 Encodes a gene involved in plant mitochondrial recombination surveillance. Disruption of this gene in combination with a mutation in MSH1 results in extensive rearrangement of the mitochondrial genome and dramatic changes in plant growth. RECA homolog 3;(source:Araport11) Ipc07G0010960 AT3G57280.1 Transmembrane proteins 14C Encodes a chloroplast inner envelope localized member of the Tmemb_14 gene family. FAX1 is involved in fatty acid and lipid homeostasis and likely functions as a fatty acid transporter that exports fatty acids from the plastid. The mRNA is cell-to-cell mobile. Transmembrane proteins 14C;(source:Araport11) Ipc07G0010950 AT2G41510.1 cytokinin oxidase/dehydrogenase 1 It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 1;(source:Araport11) Ipc07G0010940 AT5G04000.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0010930 AT3G10300.3 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc07G0010920 AT3G57300.4 0 Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family that has been shown to interact with H2A.Z and facilitates the enrichment of H2A.Z at the ends of the flowering repressor genes FLC and MAF4/5. Functions as a positive regulator of DNA homologous recombination (HR) and plays a crucial role in genome stability maintenance. In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Plants mutated in INO80 display a pleiotropic phenotype including smaller plant and organ size, and late flowering but are not more sensitive to genotoxic agents or less efficient at T-DNA integration. INO80 has also been shown to regulate a subset of the Arabidopsis transcriptome. DNA helicase INO80-like protein;(source:Araport11) Ipc07G0010910 AT1G76050.2 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc07G0010900 AT2G41540.4 0 Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc07G0010890 AT3G57320.1 0 0 threonine-tRNA ligase 2;(source:Araport11) Ipc07G0010880 AT5G04160.1 Nucleotide-sugar transporter family protein UUAT1 is a UDP-Uronic acid transporter that is localized to the Golgi. It is expressed in the seed coat epidermis and is involved in the development of seed coat mucilage. Nucleotide-sugar transporter family protein;(source:Araport11) Ipc07G0010870 AT3G57330.2 0 Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate) autoinhibited Ca2+-ATPase 11;(source:Araport11) Ipc07G0010860 AT2G41600.3 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc07G0010850 AT2G41620.1 Nucleoporin interacting component (Nup93/Nic96-like) family protein 0 Nucleoporin interacting component (Nup93/Nic96-like) family protein;(source:Araport11) Ipc07G0010840 AT3G57360.1 0 0 tRNA-splicing endonuclease subunit;(source:Araport11) Ipc07G0010830 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc07G0010820 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc07G0010810 AT2G36770.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0010800 AT2G41640.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc07G0010790 AT2G41640.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc07G0010780 AT3G10310.1 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc07G0010770 AT2G41660.1 Protein of unknown function, DUF617 Essential for hydrotropism in roots. Mutant roots are defective in hydrotropism, and have slightly reduced phototropism and modified wavy growth response. Has normal gravitropism and root elongation. MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc07G0010760 AT2G41690.1 heat shock transcription factor B3 member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor B3;(source:Araport11) Ipc07G0010750 AT3G57400.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0010740 AT2G41740.2 0 Encodes a protein with high homology to animal villin. villin 2;(source:Araport11) Ipc07G0010730 AT2G41750.1 DTW domain-containing protein 0 DTW domain-containing protein;(source:Araport11) Ipc07G0010720 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc07G0010710 AT3G57440.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0010700 AT2G41790.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc07G0010690 AT2G41790.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc07G0010680 AT4G37170.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0010670 AT5G13710.2 sterol methyltransferase 1 SMT1 controls the level of cholesterol in plants sterol methyltransferase 1;(source:Araport11) Ipc07G0010660 AT2G41810.1 Protein of unknown function, DUF642 0 imidazolonepropionase (Protein of unknown function, DUF642);(source:Araport11) Ipc07G0010650 AT3G10330.1 Cyclin-like family protein 0 Cyclin-like family protein;(source:Araport11) Ipc07G0010640 AT2G41820.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0010630 AT1G01170.2 Protein of unknown function (DUF1138) 0 ozone-responsive stress-like protein (DUF1138);(source:Araport11) Ipc07G0010620 AT2G41830.1 Uncharacterized protein 0 Uncharacterized protein;(source:Araport11) Ipc07G0010610 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc07G0010600 AT3G57500.1 0 0 fission regulator-like protein;(source:Araport11) Ipc07G0010590 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0010580 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc07G0010570 AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0010560 AT3G57530.1 calcium-dependent protein kinase 32 Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro calcium-dependent protein kinase 32;(source:Araport11) Ipc07G0010550 AT5G13650.1 elongation factor family protein Encodes SVR3, a putative chloroplast TypA translation elongation GTPase. Loss of SVR3 suppresses variegation mediated by var2. SVR3 is essential for plants’ ability to develop functional chloroplasts under chilling stress (8C), but not at normal temperature (22C). elongation factor family protein;(source:Araport11) Ipc07G0010540 AT3G57550.2 guanylate kinase guanylate kinase guanylate kinase;(source:Araport11) Ipc07G0010530 AT5G12840.4 nuclear factor Y, subunit A1 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. nuclear factor Y, subunit A1;(source:Araport11) Ipc07G0010520 AT2G41890.1 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein 0 curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein;(source:Araport11) Ipc07G0010510 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc07G0010500 AT3G18830.1 polyol/monosaccharide transporter 5 This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily. polyol/monosaccharide transporter 5;(source:Araport11) Ipc07G0010490 AT3G18830.1 polyol/monosaccharide transporter 5 This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily. polyol/monosaccharide transporter 5;(source:Araport11) Ipc07G0010480 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0010470 AT3G57600.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0010460 AT2G03270.1 DNA-binding protein, putative 0 DNA-binding protein;(source:Araport11) Ipc07G0010450 AT3G57650.1 lysophosphatidyl acyltransferase 2 Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity. lysophosphatidyl acyltransferase 2;(source:Araport11) Ipc07G0010440 AT3G18140.1 Transducin/WD40 repeat-like superfamily protein Encodes LST8-1, involved in regulating amino acid accumulation and the synthesis of myo-inositol and raffinose during plant adaptation to long days. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0010430 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0010420 AT3G12170.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc07G0010410 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc07G0010400 #N/A #N/A #N/A #N/A Ipc07G0010390 AT1G48350.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc07G0010380 AT2G42320.2 nucleolar protein gar2-related 0 nucleolar protein gar2-like protein;(source:Araport11) Ipc07G0010370 AT3G57600.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0010360 AT3G57785.1 0 0 ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein;(source:Araport11) Ipc07G0010350 AT3G57790.2 0 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc07G0010340 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0010320 AT3G57800.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0010330 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc07G0010310 AT3G12180.1 Cornichon family protein 0 Cornichon family protein;(source:Araport11) Ipc07G0010300 AT1G12160.1 Flavin-binding monooxygenase family protein Encodes a flavin-containing monooxygenases involved in biosynthesis of aliphatic glucosinolates. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc07G0010290 AT4G04870.1 cardiolipin synthase Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria. cardiolipin synthase;(source:Araport11) Ipc07G0010280 AT3G57810.4 0 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc07G0010270 AT3G57830.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0010260 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc07G0010250 AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0010240 AT3G12160.1 RAB GTPase homolog A4D Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity. RAB GTPase homolog A4D;(source:Araport11) Ipc07G0010230 AT3G12150.1 0 0 alpha/beta hydrolase family protein;(source:Araport11) Ipc07G0010220 AT5G06860.1 polygalacturonase inhibiting protein 1 Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection. Suppressed in the proton sensitive stop1-mutant, but the transcription level was recovered by transformation of STOP2. Knockout mutant showed severe damage in the root tip in low Ca and low pH medium. polygalacturonase inhibiting protein 1;(source:Araport11) Ipc07G0010210 AT5G06839.3 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc07G0010200 AT3G57890.1 Tubulin binding cofactor C domain-containing protein 0 Tubulin binding cofactor C domain-containing protein;(source:Araport11) Ipc07G0010190 AT2G42210.2 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc07G0010180 AT5G06820.1 STRUBBELIG-receptor family 2 0 STRUBBELIG-receptor family 2;(source:Araport11) Ipc07G0010170 AT2G42200.1 squamosa promoter binding protein-like 9 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem. squamosa promoter binding protein-like 9;(source:Araport11) Ipc07G0010160 AT1G18720.2 0 0 ER membrane protein, putative (DUF962);(source:Araport11) Ipc07G0010150 AT3G57930.2 0 0 rho GTPase-activating gacO-like protein;(source:Araport11) Ipc07G0010140 AT5G06810.1 Mitochondrial transcription termination factor family protein 0 transcription termination factor family protein;(source:Araport11) Ipc07G0010130 AT5G06800.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc07G0010120 AT3G57950.1 0 0 cotton fiber protein;(source:Araport11) Ipc07G0010110 AT3G57990.1 0 Encodes a ß-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose. hypothetical protein;(source:Araport11) Ipc07G0010100 AT4G36945.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc07G0010090 AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc07G0010080 AT1G51130.1 Nse4, component of Smc5/6 DNA repair complex 0 Nse4, component of Smc5/6 DNA repair complex;(source:Araport11) Ipc07G0010070 AT2G05990.2 NAD(P)-binding Rossmann-fold superfamily protein Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0010060 AT2G05990.2 NAD(P)-binding Rossmann-fold superfamily protein Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0010050 AT2G05990.2 NAD(P)-binding Rossmann-fold superfamily protein Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0010040 AT5G06760.1 Late Embryogenesis Abundant 4-5 Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro. Late Embryogenesis Abundant 4-5;(source:Araport11) Ipc07G0010030 AT3G15950.2 DNA topoisomerase-related Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies. DNA topoisomerase-like protein;(source:Araport11) Ipc07G0010020 AT3G12120.2 fatty acid desaturase 2 Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. fatty acid desaturase 2;(source:Araport11) Ipc07G0010010 AT2G42130.4 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc07G0010000 AT2G42070.1 nudix hydrolase homolog 23 Encodes a plastid-localized Nudix hydrolase that has FAD pyrophosphohydrolase activity. Negative feedback regulation of the metabolism of flavins through the hydrolysis of FAD by AtNUDX23 in plastids is involved in the flavin homeostasis in plant cells. nudix hydrolase homolog 23;(source:Araport11) Ipc07G0009990 AT2G42080.1 Chaperone DnaJ-domain superfamily protein Encodes a mitochondrial-localized DnaJ/Heat shock protein 40 (DnaJ/Hsp40) family, which is involved in protein folding. It induces cell elongation during brassinosteroid signaling through the promotion of ATP synthesis in mitochondria. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc07G0009980 AT5G59370.2 actin 4 Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen. actin 4;(source:Araport11) Ipc07G0009970 AT5G06750.3 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc07G0009960 AT2G42110.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009950 AT3G12100.1 Cation efflux family protein 0 Cation efflux family protein;(source:Araport11) Ipc07G0009940 AT3G54360.2 0 Encodes a catalase chaperon that is essential for catalase activity. Required for multiple stress responses. zinc ion binding protein;(source:Araport11) Ipc07G0009930 AT2G42040.1 0 0 WRC protein;(source:Araport11) Ipc07G0009920 AT5G06720.1 peroxidase 2 Encodes a peroxidase with diverse roles in the wound response, flower development, and syncytium formation. peroxidase 2;(source:Araport11) Ipc07G0009910 AT5G06720.1 peroxidase 2 Encodes a peroxidase with diverse roles in the wound response, flower development, and syncytium formation. peroxidase 2;(source:Araport11) Ipc07G0009900 AT5G06710.1 homeobox from Arabidopsis thaliana Homeobox-leucine zipper protein. homeobox leucine zipper protein;(source:Araport11) Ipc07G0009890 AT5G06700.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc07G0009880 AT2G02990.1 ribonuclease 1 Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. ribonuclease 1;(source:Araport11) Ipc07G0009870 AT5G06690.1 WCRKC thioredoxin 1 Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif. Functions in redox cascade with 2CPA and 2CPB via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Oxidizes redox-regulated proteins. WCRKC thioredoxin 1;(source:Araport11) Ipc07G0009860 AT3G12050.1 Aha1 domain-containing protein 0 Aha1 domain-containing protein;(source:Araport11) Ipc07G0009850 AT1G50910.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009840 AT4G38030.1 Rhamnogalacturonate lyase family protein 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc07G0009830 AT2G41970.1 Protein kinase superfamily protein Encodes MRI, a plasma membrane-localized member of the RLCK-VIII subfamily. Preferentially expressed in both pollen tubes and root hairs. mri-knockout mutants display spontaneous pollen tube and root-hair bursting. Protein kinase superfamily protein;(source:Araport11) Ipc07G0009820 AT1G55260.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0009810 AT1G57860.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc07G0009800 AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile–adult leaf transition and inducing the formation of rosette leaves on inflorescence stems. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc07G0009790 AT3G12010.1 0 0 C18orf8;(source:Araport11) Ipc07G0009780 AT3G12020.4 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0009770 AT3G58050.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009760 AT3G58060.2 0 TP8 is a tonoplast localized member of CDF family of cation transporters. It functions in roots as an Mn transporter.MTP8 transports manganese into root vacuoles of iron-deficient plants and thereby prevents inhibition of iron deficiency-induced ferric chelate reductase by manganese. In seed embryos, MTP8 is responsible for manganese and iron enrichment in the subepidermal cell layer (particularly in vit1 mutant background.) Cation efflux family protein;(source:Araport11) Ipc07G0009750 AT3G58060.2 0 TP8 is a tonoplast localized member of CDF family of cation transporters. It functions in roots as an Mn transporter.MTP8 transports manganese into root vacuoles of iron-deficient plants and thereby prevents inhibition of iron deficiency-induced ferric chelate reductase by manganese. In seed embryos, MTP8 is responsible for manganese and iron enrichment in the subepidermal cell layer (particularly in vit1 mutant background.) Cation efflux family protein;(source:Araport11) Ipc07G0009740 AT2G42520.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0009730 AT5G06610.1 Protein of unknown function (DUF620) DUF620 domain protein. In xylem cells BRD1 is expressed in the secondary wall pit boundaries. BRD1 interacts with and appears to be necessary to recruit WALLIN to the plasma membrane. lipase (DUF620);(source:Araport11) Ipc07G0009720 AT3G11964.2 0 Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development. RIBOSOMAL RNA PROCESSING 5;(source:Araport11) Ipc07G0009710 AT3G22730.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0009700 AT3G17530.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0009690 AT3G11960.3 0 0 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein;(source:Araport11) Ipc07G0009680 AT3G58480.1 calmodulin-binding family protein 0 calmodulin-binding family protein;(source:Araport11) Ipc07G0009670 AT3G11945.1 homogentisate prenyltransferase Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950. homogentisate prenyltransferase;(source:Araport11) Ipc07G0009660 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc07G0009650 AT5G18130.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0009640 AT3G03880.1 Protein of unknown function (DUF1639) 0 sterol O-acyltransferase, putative (DUF1639);(source:Araport11) Ipc07G0009630 AT3G03890.1 FMN binding 0 FMN binding protein;(source:Araport11) Ipc07G0009620 AT5G41220.1 glutathione S-transferase THETA 3 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 3;(source:Araport11) Ipc07G0009610 AT1G55365.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009600 AT3G03900.2 0 Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4. adenosine-5-phosphosulfate (APS) kinase 3;(source:Araport11) Ipc07G0009590 AT3G54720.1 Peptidase M28 family protein Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1. Peptidase M28 family protein;(source:Araport11) Ipc07G0009580 AT2G38920.6 0 0 SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein;(source:Araport11) Ipc07G0009570 AT5G06580.1 FAD-linked oxidases family protein Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. FAD-linked oxidases family protein;(source:Araport11) Ipc07G0009560 AT5G06570.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0009550 AT5G06560.1 Protein of unknown function, DUF593 0 myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc07G0009540 AT5G06550.1 0 Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway. transferring glycosyl group transferase;(source:Araport11) Ipc07G0009530 AT2G38910.1 calcium-dependent protein kinase 20 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 20;(source:Araport11) Ipc07G0009520 AT5G06530.2 ABC-2 type transporter family protein Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility. ABC-2 type transporter family protein;(source:Araport11) Ipc07G0009510 AT1G06820.1 carotenoid isomerase Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene. carotenoid isomerase;(source:Araport11) Ipc07G0009500 AT2G35840.4 0 0 Sucrose-6F-phosphate phosphohydrolase family protein;(source:Araport11) Ipc07G0009490 AT3G52360.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0009480 AT3G11690.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009470 AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor 0 FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11) Ipc07G0009460 AT3G10660.2 0 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2;(source:Araport11) Ipc07G0009450 AT2G35900.1 0 0 Mal d 1-associated protein;(source:Araport11) Ipc07G0009440 AT5G06400.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0009430 AT5G06440.3 0 0 polyketide cyclase/dehydrase/lipid transport superfamily protein;(source:Araport11) Ipc07G0009420 AT5G17050.1 UDP-glucosyl transferase 78D2 The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. UDP-glucosyl transferase 78D2;(source:Araport11) Ipc07G0009410 AT3G11760.1 0 0 structural maintenance of chromosomes flexible hinge domain protein;(source:Araport11) Ipc07G0009400 AT5G06470.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc07G0009390 AT3G11780.1 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein 0 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein;(source:Araport11) Ipc07G0009380 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0009370 AT5G06490.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0009360 AT2G01820.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0009350 AT5G06370.1 NC domain-containing protein-related PSE1 is a single copy gene that is induced in response to lead and confers increased tolerance to lead when overexpressed. It is localized to the cytoplasm. The protein has an NC domain. PSE1 appears to regulate tolerance via a GSH dependent phytochelatin synthesis pathway. NC domain-containing protein-like protein;(source:Araport11) Ipc07G0009340 AT3G11670.1 UDP-Glycosyltransferase superfamily protein Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE). UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0009330 AT3G11680.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc07G0009320 AT3G11680.2 0 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc07G0009310 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc07G0009300 AT2G35940.3 BEL1-like homeodomain 1 Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. BEL1-like homeodomain 1;(source:Araport11) Ipc07G0009290 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc07G0009280 AT2G35930.1 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23;(source:Araport11) Ipc07G0009270 AT3G11820.2 syntaxin of plants 121 Encodes a syntaxin localized at the plasma membrane. SYR1/PEN1 is a member of the SNARE superfamily and functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew. It is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. The syp121 point mutation results in stomatal phenotypes that reduce CO2 assimilation, slow vegetative growth and increase water use efficiency in the whole plant, conditional upon high light intensities and low relative humidity. The R20R21 motif of SYP121 are essential for SEC11 interaction. Mutation of the R20R21 motif blocks vesicle traffic without uncoupling the effects of SYP121 on solute and K+ uptake associated with the F9xRF motif; the mutation also mimicks the effects on traffic block observed on coexpression of the dominant negative SEC11?149 fragment. syntaxin of plants 121;(source:Araport11) Ipc07G0009260 AT5G06510.6 0 0 nuclear factor Y, subunit A10;(source:Araport11) Ipc07G0009250 AT4G31480.6 0 0 Coatomer, beta subunit;(source:Araport11) Ipc07G0009240 #N/A #N/A #N/A #N/A Ipc07G0009230 AT5G52340.1 exocyst subunit exo70 family protein A2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein A2;(source:Araport11) Ipc07G0009220 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0009210 AT3G11650.1 NDR1/HIN1-like 2 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast NDR1/HIN1-like 2;(source:Araport11) Ipc07G0009200 AT3G52480.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0009190 AT3G52490.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0009180 AT2G26000.3 0 Encodes a RING domain containing protein BRIZ2. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc07G0009170 AT5G06300.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) Ipc07G0009160 AT5G06290.1 2-cysteine peroxiredoxin B Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues. The mRNA is cell-to-cell mobile. 2-cysteine peroxiredoxin B;(source:Araport11) Ipc07G0009150 AT2G36000.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc07G0009130 AT2G36020.1 HVA22-like protein J 0 HVA22-like protein J;(source:Araport11) Ipc07G0009140 AT5G06280.3 0 0 hypothetical protein;(source:Araport11) Ipc07G0009120 AT3G11620.8 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0009100 AT3G52525.1 ovate family protein 6 0 ovate family protein 6;(source:Araport11) Ipc07G0009110 AT2G36030.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0009090 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc07G0009080 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc07G0009070 AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0009060 AT3G52560.1 ubiquitin E2 variant 1D-4 MMZ4/UEV1D encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1D can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ4/UEV1D transcripts are found in most plant organs, like the other three MMZ/UEV1 family members, but it is normally present at higher levels. In addition, MMZ4/UEV1D is the only family member whose transcripts are detected in pollen. However, MMZ4/UEV1D transcript levels do not appear to be stress-inducible. uev1d-1 mutants are more sensitive than wild type plants to the DNA damaging agent MMS in seed germination and pollen germination assays. ubiquitin E2 variant 1D-4;(source:Araport11) Ipc07G0009050 #N/A #N/A #N/A #N/A Ipc07G0009040 AT5G04800.4 Ribosomal S17 family protein 0 Ribosomal S17 family protein;(source:Araport11) Ipc07G0009030 AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0009020 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0009010 AT3G02875.1 Peptidase M20/M25/M40 family protein Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors. Peptidase M20/M25/M40 family protein;(source:Araport11) Ipc07G0009000 AT3G11590.1 0 0 golgin family A protein;(source:Araport11) Ipc07G0008990 AT4G31200.3 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein 0 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein;(source:Araport11) Ipc07G0008980 AT2G36080.1 AP2/B3-like transcriptional factor family protein Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc07G0008970 AT3G11570.1 TRICHOME BIREFRINGENCE-LIKE 8 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 8;(source:Araport11) Ipc07G0008960 AT3G11560.4 LETM1-like protein 0 LETM1-like protein;(source:Araport11) Ipc07G0008950 AT2G36090.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0008940 AT5G06200.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc07G0008930 AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein 0 Vacuolar protein sorting 55 (VPS55) family protein;(source:Araport11) Ipc07G0008920 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc07G0008910 AT3G15040.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc07G0008900 AT1G03990.1 Long-chain fatty alcohol dehydrogenase family protein 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc07G0008890 AT3G52580.1 Ribosomal protein S11 family protein 0 Ribosomal protein S11 family protein;(source:Araport11) Ipc07G0008880 AT2G36190.1 cell wall invertase 4 cwINV4 appears to function as a cell wall-localized invertase (that can catalyze the hydrolysis of sucrose into fructose and glucose) based on the phenotype of cwinv4 mutants. cwINV4 transcripts are expressed at high levels in lateral and median nectaries and this enzyme plays an important role in nectar production. cell wall invertase 4;(source:Araport11) Ipc07G0008870 AT1G08070.2 0 Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0008860 AT4G16470.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0008850 AT3G52610.1 0 0 GATA zinc finger protein;(source:Araport11) Ipc07G0008840 AT3G52610.1 0 0 GATA zinc finger protein;(source:Araport11) Ipc07G0008830 AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a DYW PPR protein that is involved in editing the mitochondrial NAD2 transcript at the site nad2-842. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0008820 AT5G03910.1 ABC2 homolog 12 member of ATH subfamily ABC2 homolog 12;(source:Araport11) Ipc07G0008810 AT5G03870.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc07G0008800 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0008790 AT3G52720.4 0 Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast. Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding, ER export, trafficking and activity of the protein. alpha carbonic anhydrase 1;(source:Araport11) Ipc07G0008780 AT5G18240.4 myb-related protein 1 Encodes MYR1 (MYR1). myb-related protein 1;(source:Araport11) Ipc07G0008770 AT3G10120.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0008760 AT1G17450.2 B-block binding subunit of TFIIIC 0 B-block binding subunit of TFIIIC;(source:Araport11) Ipc07G0008750 AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0008740 AT5G15770.1 glucose-6-phosphate acetyltransferase 1 Encodes a putative glucose-6-phosphate acetyltransferase that is likely involved in UDP-N-acetylglucosamine biosynthesis. A GFP:GNA1 fusion protein localizes to the endoplasmic reticulum. glucose-6-phosphate acetyltransferase 1;(source:Araport11) Ipc07G0008730 AT1G08360.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc07G0008720 AT3G52740.1 0 Plant specific protein.BIC1 and BIC2 inhibit cryptochrome function by blocking blue light-dependent cryptochrome dimerization.Light activated transcription of BICs is mediated by cryptochromes. hypothetical protein;(source:Araport11) Ipc07G0008710 AT2G36250.3 0 Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. Tubulin/FtsZ family protein;(source:Araport11) Ipc07G0008700 AT3G10080.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc07G0008690 AT2G36290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0008680 AT3G52780.1 Purple acid phosphatases superfamily protein 0 Purple acid phosphatases superfamily protein;(source:Araport11) Ipc07G0008670 AT3G52780.1 Purple acid phosphatases superfamily protein 0 Purple acid phosphatases superfamily protein;(source:Araport11) Ipc07G0008660 AT2G36320.1 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc07G0008650 AT3G10070.1 TBP-associated factor 12 Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. TBP-associated factor 12;(source:Araport11) Ipc07G0008640 AT2G36310.1 uridine-ribohydrolase 1 Encodes a cytoplasmic nucleoside hydrolase. It has the highest levels of activity with uridine followed by xanthosine. It shows little activity with inosine and none with cytidine. Mutant analyses indicate that it plays a role in purine and pyrimidine catabolism. uridine-ribohydrolase 1;(source:Araport11) Ipc07G0008630 AT3G52790.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc07G0008620 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc07G0008610 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc07G0008600 AT3G52880.1 monodehydroascorbate reductase 1 Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 monodehydroascorbate reductase 1;(source:Araport11) Ipc07G0008590 AT3G52880.1 monodehydroascorbate reductase 1 Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 monodehydroascorbate reductase 1;(source:Araport11) Ipc07G0008580 AT5G03620.1 Subtilisin-like serine endopeptidase family protein 0 Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc07G0008570 AT3G52890.4 0 KCBP-interacting protein kinase interacts specifically with the tail region of KCBP KCBP-interacting protein kinase;(source:Araport11) Ipc07G0008560 AT1G66950.1 pleiotropic drug resistance 11 Encodes a plasma membrane-localized ABC transporter. Confers tolerance to herbicide paraquat. pleiotropic drug resistance 11;(source:Araport11) Ipc07G0008550 AT1G66950.1 pleiotropic drug resistance 11 Encodes a plasma membrane-localized ABC transporter. Confers tolerance to herbicide paraquat. pleiotropic drug resistance 11;(source:Araport11) Ipc07G0008540 AT5G03650.1 starch branching enzyme 2.2 Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. starch branching enzyme 2.2;(source:Araport11) Ipc07G0008530 AT2G36450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic overexpression of HRD increases the density of the root network and improves water and salt stress tolerance in Arabidopsis. Overexpression of HRD in rice causes an increase in plant biomass and drought resistance. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0008520 AT5G03680.1 Duplicated homeodomain-like superfamily protein Recessive mutations are defective in organ initiation and orientation in the second whorl. This gene encodes a trihelix transcription factor whose expression is limited to margins of floral and vegetative organs. Overexpression and double mutant analyses suggest that this gene is involved in limiting lateral growth of organs. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc07G0008510 AT2G36460.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc07G0008500 AT2G27770.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc07G0008490 AT4G18240.1 starch synthase 4 Encodes a starch synthase. In Arabidopsis leaves, the catalytic C-terminal region of STARCH SYNTHASE 4 promotes starch granule initiation while its non-catalytic N-terminal region determines starch granules morphology. starch synthase 4;(source:Araport11) Ipc07G0008480 AT1G32120.1 0 0 serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc07G0008470 AT1G32120.1 0 0 serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc07G0008460 AT5G03700.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain 0 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein;(source:Araport11) Ipc09G0012000 AT1G67520.8 0 0 lectin protein kinase family protein;(source:Araport11) Ipc09G0011990 AT1G67570.2 0 0 zinc finger CONSTANS-like protein (DUF3537);(source:Araport11) Ipc09G0011980 AT5G21222.4 0 0 protein kinase family protein;(source:Araport11) Ipc09G0011970 AT5G67220.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc09G0011960 AT1G63580.1 Receptor-like protein kinase-related family protein Encodes a plasma membrane-localized protein with two DUF26 domains and a GPI anchor domain. Receptor-like protein kinase-related family protein;(source:Araport11) Ipc09G0011950 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc09G0011940 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0011930 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc09G0011920 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0011910 AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein 0 PLAT/LH2 domain-containing lipoxygenase family protein;(source:Araport11) Ipc09G0011900 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc09G0011890 AT5G14230.1 0 0 ankyrin;(source:Araport11) Ipc09G0011880 AT5G14230.1 0 0 ankyrin;(source:Araport11) Ipc09G0011870 AT5G08530.1 51 kDa subunit of complex I 0 51 kDa subunit of complex I;(source:Araport11) Ipc09G0011860 AT1G73870.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc09G0011850 AT5G43230.1 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc09G0011840 AT2G18193.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0011830 AT3G50940.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0011820 AT1G24330.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc09G0011810 AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 0 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc09G0011800 AT1G67510.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0011790 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc09G0011780 AT5G13010.1 RNA helicase family protein Encodes a nuclear localized DEAH-box containing protein that is involved in miRNA biogenesis. Loss of function mutants are embryo lethal. Gene silencing experiments demonstrated its role in the localization of DCL-1 and HYL1 to the nuclear D-body. In silenced lines, miRNA production is suppressed and plants have developmental abnormalities and are hypersensitive to fungal pathogens. RNA helicase family protein;(source:Araport11) Ipc09G0011770 AT1G24310.1 0 0 nuclear pore complex protein;(source:Araport11) Ipc09G0011760 AT1G67480.3 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc09G0011750 AT3G53260.1 phenylalanine ammonia-lyase 2 Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). phenylalanine ammonia-lyase 2;(source:Araport11) Ipc09G0011740 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0011730 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0011720 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0011710 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc09G0011700 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0011690 AT3G25460.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc09G0011680 AT1G67420.1 Zn-dependent exopeptidases superfamily protein 0 Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc09G0011670 AT4G32700.2 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding Encodes a DNA polymerase required for microhomology mediated repair of DNA double strand breaks and is required for T-DNA integration. The protein contains two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. MUS308 and mammalian DNA polymerase-like protein;(source:Araport11) Ipc09G0011660 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc09G0011650 AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger 0 HCP-like superfamily protein with MYND-type zinc finger;(source:Araport11) Ipc09G0011640 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0011630 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) Ipc09G0011620 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0011610 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0011600 AT5G43260.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc09G0011590 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0011580 AT3G48480.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc09G0011570 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0011560 AT1G67360.2 Rubber elongation factor protein (REF) Encodes a small rubber particle protein homolog. Plays dual roles as positive factors for tissue growth and development and in drought stress responses. Rubber elongation factor protein (REF);(source:Araport11) Ipc11G0007070 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc11G0007060 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0007050 #N/A #N/A #N/A #N/A Ipc11G0007040 AT4G29810.1 MAP kinase kinase 2 encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2;(source:Araport11) Ipc11G0007030 AT5G57050.1 Protein phosphatase 2C family protein Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo. Protein phosphatase 2C family protein;(source:Araport11) Ipc11G0007020 AT5G12010.1 0 0 nuclease;(source:Araport11) Ipc11G0007010 AT1G17520.4 0 Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc11G0007000 AT4G20900.2 0 Encodes a tetratricopeptide repeat protein required for cell cycle exit after meiosis II.ms5 mutants are male sterile, pollen tetrads undergo an extra round of division after meiosis II without chromosome replication, resulting in chromosome abnormalities. Gene product has some similarity to SCP1, a rat synaptonemal complex protein. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0006990 AT2G19450.1 membrane bound O-acyl transferase (MBOAT) family protein Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. Its preferred substrate is linolenoyl-CoA (C18:3-CoA). membrane bound O-acyl transferase (MBOAT) family protein;(source:Araport11) Ipc11G0006980 AT2G38890.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0006970 AT1G10350.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc11G0006960 AT5G11970.1 Protein of unknown function (DUF3511) 0 ABC family ABC transporter, putative (DUF3511);(source:Araport11) Ipc11G0006950 AT4G26100.1 casein kinase 1 Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization (member of CKL-B group). casein kinase 1;(source:Araport11) Ipc11G0006940 AT4G33050.3 calmodulin-binding family protein Encodes a calmodulin-binding protein involved in stomatal movement. calmodulin-binding family protein;(source:Araport11) Ipc11G0006930 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc11G0006910 AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0006920 AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain Component of the SPT module of the SAGA complex. Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein;(source:Araport11) Ipc11G0006900 AT5G05930.1 guanylyl cyclase 1 0 guanylyl cyclase 1;(source:Araport11) Ipc11G0006890 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc11G0006880 AT1G64280.1 regulatory protein (NPR1) This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens. regulatory protein (NPR1);(source:Araport11) Ipc11G0006870 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc11G0006860 AT3G12690.3 AGC kinase 1.5 Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. AGC kinase 1.5;(source:Araport11) Ipc11G0006850 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006830 AT2G15490.3 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc11G0006840 AT2G15490.3 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc11G0006820 AT2G22480.1 phosphofructokinase 5 0 phosphofructokinase 5;(source:Araport11) Ipc11G0006810 AT5G56930.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc11G0006800 #N/A #N/A #N/A #N/A Ipc11G0006790 AT4G30990.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc11G0006780 AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc11G0006770 AT2G20870.1 cell wall protein precursor, putative 0 cell wall protein precursor;(source:Araport11) Ipc11G0006760 AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0006750 AT5G56930.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc11G0006740 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0006730 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc11G0006720 AT2G19490.1 recA DNA recombination family protein 0 recA DNA recombination family protein;(source:Araport11) Ipc11G0006710 AT5G56960.2 0 0 basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc11G0006700 AT3G14110.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0006690 AT5G45875.1 SCR-like 27 Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein). SCR-like 27;(source:Araport11) Ipc11G0006680 AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0006670 AT3G26560.1 ATP-dependent RNA helicase, putative 0 ATP-dependent RNA helicase;(source:Araport11) Ipc11G0006660 #N/A #N/A #N/A #N/A Ipc11G0006650 AT4G29750.1 CRS1 / YhbY (CRM) domain-containing protein 0 CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc11G0006640 AT3G47250.3 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc11G0006630 AT2G19520.1 Transducin family protein / WD-40 repeat family protein Controls flowering. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0006620 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0006610 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006600 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0006590 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006580 AT4G38950.5 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc11G0006570 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006550 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006540 AT3G60310.2 0 0 acyl-CoA synthetase family protein;(source:Araport11) Ipc11G0006530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006520 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006510 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006500 AT5G04180.1 alpha carbonic anhydrase 3 0 alpha carbonic anhydrase 3;(source:Araport11) Ipc11G0006490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017630 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006480 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc11G0006470 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006460 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006450 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0006440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006430 AT2G19580.1 tetraspanin2 Member of TETRASPANIN family tetraspanin2;(source:Araport11) Ipc11G0006420 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006410 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006400 AT4G29680.1 Alkaline-phosphatase-like family protein 0 Alkaline-phosphatase-like family protein;(source:Araport11) Ipc11G0006390 AT5G56850.3 0 0 hypothetical protein;(source:Araport11) Ipc11G0006380 AT1G55160.2 0 0 WAS/WASL-interacting family protein;(source:Araport11) Ipc11G0006370 AT4G26140.1 beta-galactosidase 12 putative beta-galactosidase beta-galactosidase 12;(source:Araport11) Ipc06G0016750 AT1G59600.1 ZCW7 0 ZCW7;(source:Araport11) Ipc06G0016740 AT2G13650.3 golgi nucleotide sugar transporter 1 Encodes a Golgi-localized GDP-mannose transporter. It can transport ADP-glucose in vitro. golgi nucleotide sugar transporter 1;(source:Araport11) Ipc06G0016730 AT5G01090.1 Concanavalin A-like lectin family protein 0 Concanavalin A-like lectin family protein;(source:Araport11) Ipc06G0016720 AT3G11830.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc06G0016710 AT4G28010.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0016700 AT1G63590.1 Receptor-like protein kinase-related family protein 0 Receptor-like protein kinase-related family protein;(source:Araport11) Ipc06G0016690 AT5G58590.1 RAN binding protein 1 Encodes a Ran-binding protein 1 homolog (RanBP1). RAN binding protein 1;(source:Araport11) Ipc06G0016680 AT3G12250.7 0 basic leucine zipper transcription factor involved in the activation of SA-responsive genes. TGACG motif-binding factor 6;(source:Araport11) Ipc06G0016670 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016660 AT5G51270.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc06G0016650 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0016640 AT3G22980.3 0 0 Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc06G0016630 AT5G12240.2 0 0 octanoyltransferase;(source:Araport11) Ipc06G0016620 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016610 AT1G04990.6 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc06G0016600 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016590 ATMG00510.1 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7;(source:Araport11) Ipc06G0016580 AT2G26990.1 proteasome family protein Represses photomorphogenesis and induces skotomorphogenesis in the dark. proteasome family protein;(source:Araport11) Ipc06G0016570 AT5G44010.3 0 0 fanconi anemia group F protein (FANCF);(source:Araport11) Ipc06G0016560 AT1G26910.1 Ribosomal protein L16p/L10e family protein 0 Ribosomal protein L16p/L10e family protein;(source:Araport11) Ipc06G0016550 AT3G04840.1 Ribosomal protein S3Ae 0 Ribosomal protein S3Ae;(source:Araport11) Ipc06G0016540 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0016530 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc06G0016520 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016430 AT4G00690.1 UB-like protease 1B 0 UB-like protease 1B;(source:Araport11) Ipc06G0016500 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016490 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0016480 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0016470 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc03G0002530 AT4G25280.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0002540 AT4G36760.3 0 Arabidopsis aminopeptidase P1The mRNA is cell-to-cell mobile. aminopeptidase P1;(source:Araport11) Ipc03G0002550 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc03G0002560 AT1G65060.1 4-coumarate:CoA ligase 3 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. mRNA levels are not induced in response to wounding or to fungal infection by P. parasitica. mRNA is expressed in flowers, to a lesser degree in mature leaves and siliques and marginally in seedling roots and bolting stems of mature plants. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, cinnamic acid and 5-OH-ferulic acid. At4CL3 was unable to use sinapic acid as substrate. 4-coumarate:CoA ligase 3;(source:Araport11) Ipc03G0002570 AT5G17010.4 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0002580 AT5G17020.1 exportin 1A Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes. exportin 1A;(source:Araport11) Ipc03G0002590 AT3G03140.1 Tudor/PWWP/MBT superfamily protein Encodes a chromatin-associated protein that interacts with plant nuclear lamin-like components to regulate nuclear size. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc03G0002600 AT2G19190.1 FLG22-induced receptor-like kinase 1 Encodes a receptor-like protein kinase that is involved in early defense signaling. Expression of this gene is strongly induced during leaf senescence. It is a target of the transcription factor AtWRKY6. FLG22-induced receptor-like kinase 1;(source:Araport11) Ipc03G0002610 AT3G03130.1 0 0 lisH domain-like protein;(source:Araport11) Ipc03G0002620 AT1G71420.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0002630 AT2G21790.1 ribonucleotide reductase 1 encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair ribonucleotide reductase 1;(source:Araport11) Ipc03G0002640 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0002650 AT1G65680.1 expansin B2 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2;(source:Araport11) Ipc03G0002660 AT1G48470.1 glutamine synthetase 1;5 Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots. glutamine synthetase 1;(source:Araport11) Ipc03G0002670 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0002680 AT2G01440.1 DEAD/DEAH box RNA helicase family protein 0 DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc03G0002690 AT5G17165.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0002700 AT1G65680.1 expansin B2 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2;(source:Araport11) Ipc03G0002710 AT1G78800.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0002720 AT1G08910.1 zinc ion binding;zinc ion binding Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response. zinc ion binding protein;(source:Araport11) Ipc03G0002730 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0002740 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0002750 AT1G60500.1 Dynamin related protein 4C 0 Dynamin related protein 4C;(source:Araport11) Ipc03G0002760 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc03G0002770 AT1G65680.1 expansin B2 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2;(source:Araport11) Ipc03G0002780 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0002790 AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein Encodes a member of the Arabidopsis PPR family, expressed in the chloroplast, that acts as a regulator of chloroplast protein synthesis, interacts with the petB-petD intergenic region, and is required for the generation of petB and petD monocistronic RNAs. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0002800 #N/A #N/A #N/A #N/A Ipc03G0002810 AT3G49010.7 0 Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1). breast basic conserved 1;(source:Araport11) Ipc03G0002820 AT4G15240.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc03G0002830 AT3G18440.1 aluminum-activated malate transporter 9 Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves. The mRNA is cell-to-cell mobile. aluminum-activated malate transporter 9;(source:Araport11) Ipc03G0002840 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0002850 AT1G54490.1 exoribonuclease 4 Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing. The mRNA is cell-to-cell mobile. exoribonuclease 4;(source:Araport11) Ipc03G0002860 AT4G17350.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 3 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc03G0002870 AT2G44870.1 0 0 replicase polyprotein 1ab protein;(source:Araport11) Ipc03G0002880 AT4G10430.3 TMPIT-like protein 0 TMPIT-like protein;(source:Araport11) Ipc03G0002890 AT4G27860.2 vacuolar iron transporter (VIT) family protein 0 vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc03G0002900 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0002910 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc03G0002920 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0002930 AT5G24680.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 0 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2;(source:Araport11) Ipc03G0002940 AT5G25830.1 GATA transcription factor 12 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 12;(source:Araport11) Ipc03G0002950 AT1G80150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0002960 AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0002970 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0002980 AT1G08880.1 Histone superfamily protein Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. Histone superfamily protein;(source:Araport11) Ipc03G0002990 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0003000 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0003010 #N/A #N/A #N/A #N/A Ipc03G0003030 AT1G04590.1 0 0 PPR containing-like protein;(source:Araport11) Ipc03G0003020 AT3G57510.1 Pectin lyase-like superfamily protein Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0003040 AT4G02010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0003050 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc03G0003060 AT5G45580.3 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0003070 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc03G0003080 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0003090 AT5G13920.2 0 0 GRF zinc finger / Zinc knuckle protein;(source:Araport11) Ipc03G0003100 AT3G15690.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc03G0003110 AT1G80210.1 Mov34/MPN/PAD-1 family protein 0 Mov34/MPN/PAD-1 family protein;(source:Araport11) Ipc03G0003120 AT1G80210.2 Mov34/MPN/PAD-1 family protein 0 Mov34/MPN/PAD-1 family protein;(source:Araport11) Ipc03G0003130 AT5G66030.2 Golgi-localized GRIP domain-containing protein Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization. Golgi-localized GRIP domain-containing protein;(source:Araport11) Ipc03G0003140 AT5G21040.3 0 Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. F-box protein 2;(source:Araport11) Ipc03G0003150 AT5G24580.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0003160 AT5G54140.1 IAA-leucine-resistant (ILR1)-like 3 encodes a protein similar to IAA amino acid conjugate hydrolase IAA-leucine-resistant (ILR1)-like 3;(source:Araport11) Ipc03G0003170 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0003180 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0003190 AT3G49490.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0003200 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc03G0003210 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0003220 AT1G05260.1 Peroxidase superfamily protein Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc03G0003230 AT3G21770.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc03G0003240 AT1G63660.2 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative 0 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase;(source:Araport11) Ipc03G0003250 AT5G57440.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein a member of haloacid dehalogenase-like hydrolase family Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0003260 AT5G24650.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein HP30/Tric1 is a component of the mitochondrial protein translocation complex and is involved in tRNA transport along with HP30-2/Tric2.It interacts with several members of the TOM complex such as TOM40 and this interaction is mediated by the SAM domain. Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc03G0003270 AT5G24660.1 response to low sulfur 2 0 response to low sulfur 2;(source:Araport11) Ipc03G0003280 AT2G39330.3 0 0 jacalin-related lectin 23;(source:Araport11) Ipc03G0003290 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc03G0003300 AT4G10450.1 Ribosomal protein L6 family 0 Ribosomal protein L6 family;(source:Araport11) Ipc03G0003310 AT5G37570.2 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0003320 AT4G01575.1 serine protease inhibitor, Kazal-type family protein Encodes a putative Kazal-type serine proteinase inhibitor that is highly expressed in seeds, mature roots and flowers. serine protease inhibitor, Kazal-type family protein;(source:Araport11) Ipc03G0003330 AT1G04635.1 ribonuclease P family protein / Rpp14 family protein 0 ribonuclease P family protein / Rpp14 family protein;(source:Araport11) Ipc03G0003340 AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein TRM4B is a cytosine-5--methyltransferase. Mutants have decreased methyl cytosine and defects in root development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0003350 AT1G05260.1 Peroxidase superfamily protein Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc03G0003360 AT4G27660.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0003370 AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0003380 AT5G41790.2 0 CIP1 physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. IN the root the protein is found around epidermal cells. Expression is induced by ABA and osmotic stress but is not regulated by light. Loss of function mutants are also sensitive to osmotic stress and are somewhat ABA insensitive. The mRNA is cell-to-cell mobile. COP1-interactive protein 1;(source:Araport11) Ipc03G0003390 AT1G73690.1 cyclin-dependent kinase D1;1 cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. cyclin-dependent kinase D1;(source:Araport11) Ipc03G0003400 AT1G20875.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0003410 #N/A #N/A #N/A #N/A Ipc03G0003420 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0003430 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0003440 AT3G23840.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc03G0003450 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc03G0003460 #N/A #N/A #N/A #N/A Ipc03G0003470 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc03G0003480 AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc03G0003490 AT5G06000.1 eukaryotic translation initiation factor 3G2 One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). eukaryotic translation initiation factor 3G2;(source:Araport11) Ipc03G0003500 AT5G24470.1 pseudo-response regulator 5 Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY. two-component response regulator-like protein;(source:Araport11) Ipc03G0003510 AT3G58940.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc03G0003520 AT5G24500.1 0 0 fantom protein;(source:Araport11) Ipc03G0003530 AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein membrane related protein CP5 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc03G0003540 AT5G24510.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc03G0003550 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc03G0003560 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc03G0003570 AT1G32790.1 CTC-interacting domain 11 RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins. CTC-interacting domain 11;(source:Araport11) Ipc03G0003580 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc03G0003590 AT5G42090.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc03G0003600 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc03G0003610 AT1G01160.1 GRF1-interacting factor 2 Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA GRF1-interacting factor 2;(source:Araport11) Ipc03G0003620 AT5G53620.3 0 0 RNA polymerase II degradation factor;(source:Araport11) Ipc03G0003630 AT2G46690.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc03G0003640 AT1G57680.3 0 0 plasminogen activator inhibitor;(source:Araport11) Ipc03G0003650 AT2G31560.3 0 0 signal transducer/transcription protein, putative (DUF1685);(source:Araport11) Ipc03G0003660 AT2G46680.1 homeobox 7 encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. homeobox 7;(source:Araport11) Ipc03G0003670 AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis. NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc03G0003680 AT3G49350.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc03G0003690 AT5G53560.1 cytochrome B5 isoform E Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. cytochrome B5 isoform E;(source:Araport11) Ipc03G0003700 AT2G46620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0003710 AT5G08680.1 ATP synthase alpha/beta family protein Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile. ATP synthase alpha/beta family protein;(source:Araport11) Ipc03G0003720 AT4G27700.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc03G0003730 #N/A #N/A #N/A #N/A Ipc03G0003740 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0003750 AT5G54585.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0003760 AT2G39480.2 0 0 P-glycoprotein 6;(source:Araport11) Ipc03G0003770 AT5G21040.3 0 Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. F-box protein 2;(source:Araport11) Ipc03G0003780 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc03G0003790 AT4G24140.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0003800 AT2G42700.3 0 Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus Sec1 domain, involved in the development of vegetative organs. Required for proper maturation of seed storage proteins. vesicle docking protein;(source:Araport11) Ipc03G0003810 AT1G76390.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0003820 AT1G68890.1 magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis. The mRNA is cell-to-cell mobile. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein;(source:Araport11) Ipc03G0003830 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0003840 AT4G24060.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc03G0003850 AT2G35330.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0003860 AT3G51820.1 UbiA prenyltransferase family protein Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP. UbiA prenyltransferase family protein;(source:Araport11) Ipc03G0003870 AT5G24330.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. TRITHORAX-RELATED PROTEIN 6;(source:Araport11) Ipc03G0003880 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0003890 AT4G18050.1 P-glycoprotein 9 0 P-glycoprotein 9;(source:Araport11) Ipc03G0003900 AT5G24320.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0003910 AT5G24318.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc03G0003920 AT5G53486.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0003930 #N/A #N/A #N/A #N/A Ipc03G0003940 AT5G40200.1 DegP protease 9 Encodes a putative DegP protease. The mRNA is cell-to-cell mobile. DegP protease 9;(source:Araport11) Ipc03G0003950 AT4G27800.1 thylakoid-associated phosphatase 38 Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1. thylakoid-associated phosphatase 38;(source:Araport11) Ipc03G0003960 #N/A #N/A #N/A #N/A Ipc03G0003970 AT5G53060.1 RNA-binding KH domain-containing protein Encodes a KH domain-containing putative RNA-binding protein RCF3. Functions as a upstream regulator for heat stress-responsive gene expression and thermotolerance and mediation of jasmonate signalling.Also shown to interact with HYL1 and is a component of the nuclear dicing body and to function in primary miRNA processing. RNA-binding KH domain-containing protein;(source:Araport11) Ipc03G0003980 AT5G24310.1 ABL interactor-like protein 3 One of four ABI-like proteins. ABL interactor-like protein 3;(source:Araport11) Ipc03G0003990 AT1G22600.1 Late embryogenesis abundant protein (LEA) family protein 0 Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) Ipc03G0004000 AT3G15500.1 NAC domain containing protein 3 Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3. The mRNA is cell-to-cell mobile. NAC domain containing protein 3;(source:Araport11) Ipc03G0004010 AT5G53040.1 RWP-RK domain-containing protein Encodes GROUNDED (GRD), a putative RWP-RK-type transcription factor broadly expressed in early development. GRD promotes zygote elongation and basal cell fates. RWP-RK domain-containing protein;(source:Araport11) Ipc03G0004020 AT3G55930.1 Pre-mRNA-splicing factor 3 0 pre-mRNA-splicing factor;(source:Araport11) Ipc03G0004030 AT5G24280.3 0 Encodes GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein. Involved in somatic homologous recombination. gamma-irradiation and mitomycin c induced 1;(source:Araport11) Ipc03G0004040 AT5G53350.1 CLP protease regulatory subunit X CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X;(source:Araport11) Ipc03G0004050 AT3G61790.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc14G0018380 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0018370 AT5G24270.4 0 encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. Calcium-binding EF-hand family protein;(source:Araport11) Ipc14G0018360 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0018340 AT5G24260.4 0 0 prolyl oligopeptidase family protein;(source:Araport11) Ipc14G0018350 AT5G24260.5 0 0 prolyl oligopeptidase family protein;(source:Araport11) Ipc14G0018330 AT3G49220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc14G0018320 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc14G0018310 AT3G49210.2 0 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc14G0018300 AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like 0 Cytochrome c oxidase biogenesis protein Cmc1-like protein;(source:Araport11) IpcGene09156 AT5G53400.1 HSP20-like chaperones superfamily protein Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures. The mRNA is cell-to-cell mobile. HSP20-like chaperones superfamily protein;(source:Araport11) IpcGene09161 AT1G27240.1 Paired amphipathic helix (PAH2) superfamily protein 0 Paired amphipathic helix (PAH2) superfamily protein;(source:Araport11) IpcGene09162 AT5G39890.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) IpcGene09164 #N/A #N/A #N/A #N/A IpcGene09165 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) IpcGene09168 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) IpcGene09169 AT2G19270.1 0 0 mitotic checkpoint protein PRCC-carboxy-term protein;(source:Araport11) IpcGene09170 AT1G36310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0023900 AT1G71970.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0023890 AT2G18050.1 histone H1-3 encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. The mRNA is cell-to-cell mobile. histone H1-3;(source:Araport11) Ipc01G0023880 AT4G29430.1 ribosomal protein S15A E 0 ribosomal protein S15A E;(source:Araport11) Ipc01G0023870 AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain 0 Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein;(source:Araport11) Ipc01G0023860 AT5G49910.1 chloroplast heat shock protein 70-2 Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile. chloroplast heat shock protein 70-2;(source:Araport11) Ipc01G0023850 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc01G0023840 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0023830 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0023820 AT2G31305.1 inhibitor-3 Encodes inhibitor-3 (Inh3), a regulatory subunit of protein phosphatase 1 (PP1). Inh3 inhibits the phosphatase activity of the PP1 catalytic subunit (PP1c). Biochemical analyses demonstrate that Inh3 binds to PP1c via the RVxF motif of Inh3, a consensus PP1c-binding sequence both in vitro and in vivo. inhibitor-3;(source:Araport11) Ipc01G0023810 AT4G09820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. It binds the promoter of both AT3G26790 and AT1G28300.TT8 interacts with JAZ proteins to regulate anthocyanin accumulation. TT8 acts maternally to affect seed FA biosynthesis and inhibits seed FA accumulation by down-regulating a group of genes either critical to embryonic development or important in the FA biosynthesis pathway. TT8 represses the activities of LEAFY COTYLEDON1, LEAFY COTYLEDON2, and FUSCA3, the critical transcriptional factors important for seed development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0023800 AT5G47850.1 CRINKLY4 related 4 0 CRINKLY4 related 4;(source:Araport11) Ipc01G0023790 AT2G26610.1 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0023780 AT1G72180.1 Leucine-rich receptor-like protein kinase family protein Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0023770 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0023760 AT1G60930.1 RECQ helicase L4B AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination. RECQ helicase L4B;(source:Araport11) Ipc01G0023750 AT4G09530.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc01G0023740 #N/A #N/A #N/A #N/A Ipc01G0023730 AT4G30820.3 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related 0 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein;(source:Araport11) Ipc01G0023720 AT4G09510.1 cytosolic invertase 2 CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues. cytosolic invertase 2;(source:Araport11) Ipc01G0023710 AT5G53770.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc01G0023700 AT2G06166.1 Defensin-like (DEFL) family protein Encodes a defensin-like (DEFL) family protein. Defensin-like (DEFL) family protein;(source:Araport11) Ipc01G0023690 AT5G59600.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0023680 AT5G53070.1 Ribosomal protein L9/RNase H1 0 Ribosomal protein L9/RNase H1;(source:Araport11) Ipc01G0023670 AT1G58100.1 TCP family transcription factor Encodes TCP8, belongs to the TCP transcription factor family known to bind site II elements in promoter regions. TCP family transcription factor;(source:Araport11) Ipc01G0023660 AT1G35530.4 0 Encodes FANCM, a highly conserved helicase that functions as a major factor limiting meiotic crossover formation. It is not directly involved in the repair of DNA lesions but suppresses spontaneous somatic homologous recombination via a RecQ helicase (At-RECQ4A)-independent pathway. DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc01G0023650 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0023640 AT3G22220.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc01G0023630 AT3G22220.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc01G0023620 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc01G0023610 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0023600 AT1G35510.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc01G0023590 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0023580 AT1G54970.1 proline-rich protein 1 encodes a proline-rich protein that is specifically expressed in the root. The mRNA is cell-to-cell mobile. proline-rich protein 1;(source:Araport11) Ipc01G0023570 AT4G04885.1 PCF11P-similar protein 4 Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time. PCF11P-similar protein 4;(source:Araport11) Ipc01G0023560 AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0023550 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0023540 AT1G72060.1 serine-type endopeptidase inhibitors 0 serine-type endopeptidase inhibitor;(source:Araport11) Ipc01G0023530 AT3G07005.1 low-molecular-weight cysteine-rich 43 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 43;(source:Araport11) Ipc01G0023520 AT4G33550.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0023510 AT1G22610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0023500 AT2G20030.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0023490 AT2G01060.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc01G0023480 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc01G0023470 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc01G0023460 AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0023450 AT1G35430.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0023440 AT1G22540.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0023430 AT1G72170.1 Domain of unknown function (DUF543) 0 MICOS complex subunit, putative (DUF543);(source:Araport11) Ipc01G0023420 AT4G09900.1 methyl esterase 12 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 12;(source:Araport11) Ipc01G0023410 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0023400 AT1G09640.1 Translation elongation factor EF1B, gamma chain 0 Translation elongation factor EF1B, gamma chain;(source:Araport11) Ipc01G0023390 AT2G47010.2 0 0 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase;(source:Araport11) Ipc01G0023380 AT1G43600.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc01G0023370 AT1G71692.1 AGAMOUS-like 12 Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots. AGAMOUS-like 12;(source:Araport11) Ipc01G0023360 AT1G73720.1 transducin family protein / WD-40 repeat family protein Encodes SMU1, a protein involved in RNA splicing. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0023350 AT1G71691.2 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0023340 AT1G71691.2 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0023330 AT3G62810.2 0 0 complex 1 family protein / LVR family protein;(source:Araport11) Ipc01G0023320 AT1G76750.1 Protein of unknown function (DUF1278) Encodes a small cysteine-rich protein that is secreted by the egg cell during gamete interactions. The regulated secretion of EC1 by the egg cell upon sperm-egg interaction is proposed to ensure the appropriate localization of the cell-fusion machinery in distinct sperm membrane domains to accomplish gamete fusion. egg cell-secreted-like protein (DUF1278);(source:Araport11) Ipc01G0023310 AT4G09970.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0023300 AT1G09610.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc01G0023290 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc01G0023280 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc01G0023270 AT3G53280.1 cytochrome p450 71b5 cytochrome P450 monooxygenase The mRNA is cell-to-cell mobile. cytochrome p450 71b5;(source:Araport11) Ipc01G0023260 AT5G06900.1 cytochrome P450, family 93, subfamily D, polypeptide 1 member of CYP93D cytochrome P450, family 93, subfamily D, polypeptide 1;(source:Araport11) Ipc01G0023250 AT3G49060.3 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc01G0023240 AT1G33780.1 Protein of unknown function (DUF179) 0 electron transporter, putative (DUF179);(source:Araport11) Ipc01G0023230 AT4G10010.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0023220 AT1G71500.1 Rieske (2Fe-2S) domain-containing protein Encodes PSB33, a protein conserved in the plastid lineage. PSB33 is associated with the chloroplast thylakoid membrane and provides stability to Photosystem II. The mRNA is cell-to-cell mobile. Rieske (2Fe-2S) domain-containing protein;(source:Araport11) Ipc01G0023210 AT4G10020.1 hydroxysteroid dehydrogenase 5 Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. hydroxysteroid dehydrogenase 5;(source:Araport11) Ipc01G0023200 AT4G32480.1 Protein of unknown function (DUF506) 0 sugar phosphate exchanger, putative (DUF506);(source:Araport11) Ipc01G0023190 AT1G71490.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0023180 AT3G25855.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc01G0023170 AT1G49050.1 Eukaryotic aspartyl protease family protein Encodes a member of the aspartyl protease family. Interacts with BAGP1 and BAG6 and appears to be required for cleavage of BAG6 as BAG6 is not cleaved in APCB1 mutant backgrounds. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0023160 AT1G20640.3 0 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc01G0023150 AT5G55610.2 0 0 isopentenyl-diphosphate delta-isomerase;(source:Araport11) Ipc01G0023140 AT1G51450.1 TRAUCO Nuclear protein required for early embryogenesis. Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex that is also involved in the timing of the floral transition and in leaf morphogenesis. Mutants are decreased in H3K4 histone trimethylation. TRAUCO;(source:Araport11) Ipc01G0023130 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0023120 AT1G18450.1 actin-related protein 4 Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes. actin-related protein 4;(source:Araport11) Ipc01G0023110 AT4G10030.1 alpha/beta-Hydrolases superfamily protein Alpha/beta hydrolase domain containing protein involved in lipid biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0023100 AT1G71480.1 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc01G0023090 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0023080 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0023070 AT5G16420.4 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0023060 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0023050 AT4G19510.7 0 0 Disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0023040 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0023030 AT5G41750.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc01G0023020 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) Ipc04G0001310 AT5G02740.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc04G0001300 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0001290 AT1G77580.4 0 0 filament-like protein (DUF869);(source:Araport11) Ipc04G0001280 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0001270 AT1G09450.1 Protein kinase superfamily protein Encodes a protein kinase that phosphorylates histone H3 at Thr3 and Thr11 and plays a role in mitotic cell division. Protein kinase superfamily protein;(source:Araport11) Ipc04G0001260 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0001250 AT4G14930.2 0 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0001240 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc04G0001230 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0001220 AT3G04910.1 with no lysine (K) kinase 1 Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. with no lysine (K) kinase 1;(source:Araport11) Ipc04G0001210 AT4G09800.1 S18 ribosomal protein encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex S18 ribosomal protein;(source:Araport11) Ipc04G0001200 AT3G22430.1 0 0 RNA recognition motif XS domain protein;(source:Araport11) Ipc04G0001190 AT3G22440.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc04G0001180 AT2G32090.1 Lactoylglutathione lyase / glyoxalase I family protein 0 Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc04G0001170 AT3G25060.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0001160 AT3G22530.1 0 0 heat shock protein;(source:Araport11) Ipc04G0001150 AT1G05430.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001140 AT1G05440.1 C-8 sterol isomerases 0 C-8 sterol isomerase;(source:Araport11) Ipc04G0001130 AT3G22540.1 Protein of unknown function (DUF1677) 0 hypothetical protein (DUF1677);(source:Araport11) Ipc04G0001120 AT3G22550.1 Protein of unknown function (DUF581) 0 NAD(P)H-quinone oxidoreductase subunit, putative (DUF581);(source:Araport11) Ipc04G0001110 AT3G13080.1 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc04G0001100 AT4G30990.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0001090 AT3G22590.1 PLANT HOMOLOGOUS TO PARAFIBROMIN Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC). Member of PAF-C complex. PLANT HOMOLOGOUS TO PARAFIBROMIN;(source:Araport11) Ipc04G0001080 AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc04G0001070 AT3G22630.1 20S proteasome beta subunit D1 Encodes 20S proteasome beta subunit PBD1 (PBD1). 20S proteasome beta subunit D1;(source:Araport11) Ipc04G0001060 AT1G51080.1 0 0 golgin family A protein;(source:Araport11) Ipc04G0001050 AT1G05470.2 0 Encodes an inositol polyphosphate 5 Prime phosphatase (5PTase) that is required for the proper recruitment of cells into developing vascular tissue in leaves and cotyledons. It is most similar to Type I 5PTases that are known to cleave a phosphate from IP3 or IP4. cvp2 mutants have elevated levels of IP3 and are hypersensitive to ABA in seed germination assays. DNAse I-like superfamily protein;(source:Araport11) Ipc04G0001040 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc04G0001030 AT2G20830.4 0 0 folic acid binding / transferase;(source:Araport11) Ipc04G0001020 AT3G53130.1 Cytochrome P450 superfamily protein Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3. Cytochrome P450 superfamily protein;(source:Araport11) Ipc04G0001010 AT3G22560.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0001000 AT2G32030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0000990 AT1G64260.2 0 0 MuDR family transposase;(source:Araport11) Ipc04G0000980 AT2G20830.4 0 0 folic acid binding / transferase;(source:Araport11) Ipc04G0000970 AT2G20825.1 Developmental regulator, ULTRAPETALA 0 Developmental regulator, ULTRAPETALA;(source:Araport11) Ipc04G0000960 AT3G03760.1 LOB domain-containing protein 20 0 LOB domain-containing protein 20;(source:Araport11) Ipc04G0000950 AT5G10840.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc04G0000940 AT5G30510.1 ribosomal protein S1 0 ribosomal protein S1;(source:Araport11) Ipc04G0000930 AT5G50050.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0000920 AT4G24640.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Encodes AppB protein (AppB1). Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0000910 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0000900 AT3G22450.2 0 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc04G0000890 #N/A #N/A #N/A #N/A Ipc04G0000880 AT4G24640.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Encodes AppB protein (AppB1). Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0006850 AT3G50470.1 homolog of RPW8 3 Homolog of RPW8 homolog of RPW8 3;(source:Araport11) Ipc05G0006840 AT2G23620.1 methyl esterase 1 Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro. methyl esterase 1;(source:Araport11) Ipc05G0006830 AT2G23540.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0006820 AT2G23620.1 methyl esterase 1 Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro. methyl esterase 1;(source:Araport11) Ipc05G0006810 AT4G00005.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc05G0006800 AT3G48520.1 cytochrome P450, family 94, subfamily B, polypeptide 3 CYP94B3 is a jasmonoyl-isoleucine-12-hydroxylase that catalyzes the formation of 12-OH-JA-Ile from JA-Ile. By reducing the levels of this the biologically active phytohormone, CYP94B3 attenuates the jasmonic acid signaling cascade. CYP94B3 transcript levels rise in response to wounding. cytochrome P450, family 94, subfamily B, polypeptide 3;(source:Araport11) Ipc05G0006790 AT2G23530.1 Zinc-finger domain of monoamine-oxidase A repressor R1 0 Zinc-finger domain of monoamine-oxidase A repressor R1;(source:Araport11) Ipc05G0006780 AT4G31640.1 transcriptional factor B3 family protein 0 transcriptional factor B3 family protein;(source:Araport11) Ipc05G0006770 AT2G23460.1 extra-large G-protein 1 encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits. extra-large G-protein 1;(source:Araport11) Ipc05G0006760 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0006750 AT4G36860.1 LIM domain-containing protein DAR1 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. LIM domain-containing protein;(source:Araport11) Ipc05G0006740 AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a putative LysM-containing receptor-like kinase LYK4. Shares overlapping function with LYK5 in mediating chitin-triggered immune responses. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc05G0006730 AT3G50770.1 calmodulin-like 41 0 calmodulin-like 41;(source:Araport11) Ipc05G0006720 AT4G36850.2 0 0 PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) Ipc05G0006710 AT4G36830.1 GNS1/SUR4 membrane protein family ELO family protein. GNS1/SUR4 membrane protein family;(source:Araport11) Ipc05G0006700 AT2G23790.1 Protein of unknown function (DUF607) 0 calcium uniporter (DUF607);(source:Araport11) Ipc05G0006690 AT1G67260.3 0 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc05G0006680 AT3G02410.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0006670 AT5G38560.1 Protein kinase superfamily protein Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). Protein kinase superfamily protein;(source:Araport11) Ipc05G0006660 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc05G0006650 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc05G0006640 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc05G0006630 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc05G0006620 AT1G13410.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0006610 AT3G30841.2 0 0 Cofactor-independent phosphoglycerate mutase;(source:Araport11) Ipc05G0006570 AT1G63740.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0006600 AT5G38730.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0006590 AT3G02380.1 CONSTANS-like 2 homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins CONSTANS-like 2;(source:Araport11) Ipc05G0006580 AT4G31730.1 glutamine dumper 1 Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretion The mRNA is cell-to-cell mobile. glutamine dumper 1;(source:Araport11) Ipc05G0006560 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0006550 AT4G31730.1 glutamine dumper 1 Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretion The mRNA is cell-to-cell mobile. glutamine dumper 1;(source:Araport11) Ipc05G0006540 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc05G0006530 AT3G02340.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0006520 AT5G11390.1 WPP domain-interacting protein 1 Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells. WPP domain-interacting protein 1;(source:Araport11) Ipc05G0006510 AT5G49550.1 0 Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1. biogenesis of lysosome organelles complex 1 subunit-like protein;(source:Araport11) Ipc05G0006500 AT3G30380.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0006490 AT5G15730.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0006480 AT5G15790.5 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0006470 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc05G0006460 AT3G30210.1 myb domain protein 121 Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121). myb domain protein 121;(source:Araport11) Ipc05G0006450 AT3G08770.1 lipid transfer protein 6 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 6;(source:Araport11) Ipc05G0006440 AT5G15810.1 N2,N2-dimethylguanosine tRNA methyltransferase 0 tRNA (guanine(26)-N(2))-dimethyltransferase;(source:Araport11) Ipc05G0006430 AT5G38970.1 brassinosteroid-6-oxidase 1 Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. brassinosteroid-6-oxidase 1;(source:Araport11) Ipc05G0006420 AT5G15640.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc05G0006410 AT4G14010.1 ralf-like 32 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 32;(source:Araport11) Ipc05G0006400 AT2G33775.1 ralf-like 19 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 19;(source:Araport11) Ipc05G0006390 AT1G28270.1 ralf-like 4 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. RALF4 and RALF19 act redundantly in the pollen tube to regulate pollen tube growth. ralf-like 4;(source:Araport11) Ipc05G0006380 AT5G39040.1 transporter associated with antigen processing protein 2 Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2;(source:Araport11) Ipc05G0006370 AT5G38980.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0006360 AT1G28270.1 ralf-like 4 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. RALF4 and RALF19 act redundantly in the pollen tube to regulate pollen tube growth. ralf-like 4;(source:Araport11) Ipc05G0006350 AT1G69230.2 SPIRAL1-like2 SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. SPIRAL1-like2;(source:Araport11) Ipc05G0006340 AT5G26710.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0 Glutamyl/glutaminyl-tRNA synthetase, class Ic;(source:Araport11) Ipc05G0006330 AT1G74160.1 0 Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation. LONGIFOLIA protein;(source:Araport11) Ipc05G0006320 AT3G02150.1 plastid transcription factor 1 a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation. plastid transcription factor 1;(source:Araport11) Ipc05G0006310 AT1G56240.1 phloem protein 2-B13 0 phloem protein 2-B13;(source:Araport11) Ipc05G0006300 AT1G09155.1 phloem protein 2-B15 0 phloem protein 2-B15;(source:Araport11) Ipc05G0006290 AT2G03630.2 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc05G0006280 AT1G50170.1 sirohydrochlorin ferrochelatase B encodes sirohydrochlorin ferrochelatase catalyzing the last step of the siroheme biosynthesis sirohydrochlorin ferrochelatase B;(source:Araport11) Ipc05G0006270 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc05G0006260 #N/A #N/A #N/A #N/A Ipc05G0006250 AT3G29400.1 exocyst subunit exo70 family protein E1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein E1;(source:Araport11) Ipc05G0006240 AT3G29390.1 RS2-interacting KH protein Nuclear localized K-homology containing protein that interacts with AS1. RS2-interacting KH protein;(source:Araport11) Ipc05G0006230 AT5G07980.2 0 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc05G0006220 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006210 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006200 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006190 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006180 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006170 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0006160 AT1G20530.1 Protein of unknown function (DUF630 and DUF632) 0 girdin (DUF630 and DUF632);(source:Araport11) Ipc05G0006150 AT5G39240.1 0 Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. transcription factor UPBEAT-like protein;(source:Araport11) Ipc05G0006140 AT4G00830.6 0 Encodes a heterogeneous nuclear ribonucleoprotein (hnRNP-Q) that is involved in the plant innate immune response and may function as a suppressor of cell-autonomous immunity. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0006130 AT5G15510.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc05G0006120 AT2G40715.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0006110 AT3G29360.2 UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein;(source:Araport11) Ipc05G0006100 AT2G03470.1 ELM2 domain-containing protein 0 ELM2 domain-containing protein;(source:Araport11) Ipc05G0006090 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc05G0006080 AT5G15390.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc05G0006070 AT5G39400.1 Calcium/lipid-binding (CaLB) phosphatase 0 Calcium/lipid-binding (CaLB) phosphatase;(source:Araport11) Ipc05G0006060 AT5G15410.1 Cyclic nucleotide-regulated ion channel family protein 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens. CNGC2 could be the key step mediating bulk Ca2+ influx into leaf cells after unloading from the vascular and have no direct roles in the leaf development and HR. Cyclic nucleotide-regulated ion channel family protein;(source:Araport11) Ipc05G0006050 AT3G29270.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0006040 AT5G39360.1 EID1-like 2 0 EID1-like 2;(source:Araport11) Ipc05G0006030 AT3G29280.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0006020 AT3G29290.5 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0006010 AT5G15450.1 casein lytic proteinase B3 Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3;(source:Araport11) Ipc05G0006000 AT5G39410.1 Saccharopine dehydrogenase 0 Saccharopine dehydrogenase;(source:Araport11) Ipc05G0005990 AT5G39410.1 Saccharopine dehydrogenase 0 Saccharopine dehydrogenase;(source:Araport11) Ipc05G0005980 AT1G77710.1 0 0 ubiquitin-fold modifier;(source:Araport11) Ipc05G0005970 AT3G29240.2 Protein of unknown function (DUF179) 0 PPR containing protein (DUF179);(source:Araport11) Ipc05G0005960 AT3G29200.1 chorismate mutase 1 L-ascorbate peroxidase chorismate mutase 1;(source:Araport11) Ipc05G0005950 AT5G15350.1 early nodulin-like protein 17 0 early nodulin-like protein 17;(source:Araport11) Ipc05G0005940 AT1G13970.1 Protein of unknown function (DUF1336) 0 beta-hexosaminidase (DUF1336);(source:Araport11) Ipc05G0005930 #N/A #N/A #N/A #N/A Ipc05G0005920 AT1G13980.2 sec7 domain-containing protein Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions. BFA inhibits GNOM trafficking and BFA resistant lines are more resistant to cold stress. sec7 domain-containing protein;(source:Araport11) Ipc05G0005910 AT3G29100.3 0 Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated. vesicle transport V-snare 13;(source:Araport11) Ipc05G0005900 AT1G22930.2 T-complex protein 11 0 T-complex protein 11;(source:Araport11) Ipc05G0005890 AT3G29075.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc05G0005880 AT5G15310.1 myb domain protein 16 Member of the R2R3 factor gene family. myb domain protein 16;(source:Araport11) Ipc05G0005870 AT5G07680.2 NAC domain containing protein 80 0 NAC domain containing protein 80;(source:Araport11) Ipc05G0005860 AT3G03210.1 0 0 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein;(source:Araport11) Ipc05G0005850 AT5G15290.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0005840 AT5G15280.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0005830 AT5G39670.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0005820 AT4G14910.1 HISTIDINE BIOSYNTHESIS 5B Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis HISTIDINE BIOSYNTHESIS 5B;(source:Araport11) Ipc05G0005810 AT3G01180.1 starch synthase 2 0 starch synthase 2;(source:Araport11) Ipc05G0005800 AT3G01175.1 Protein of unknown function (DUF1666) 0 transmembrane protein;(source:Araport11) Ipc05G0005790 AT3G28960.5 0 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc05G0005780 AT5G48600.2 structural maintenance of chromosome 3 member of SMC subfamily structural maintenance of chromosome 3;(source:Araport11) Ipc05G0005770 AT2G30600.6 0 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc05G0005760 AT2G11890.1 adenylate cyclases Encodes a tripolyphosphatase that is involved in root development. adenylate cyclase;(source:Araport11) Ipc05G0005750 AT3G28920.1 homeobox protein 34 0 homeobox protein 34;(source:Araport11) Ipc05G0005740 AT3G28917.1 mini zinc finger 2 0 mini zinc finger 2;(source:Araport11) Ipc05G0005730 AT3G47600.1 myb domain protein 94 Encodes a putative transcription factor (MYB94). myb domain protein 94;(source:Araport11) Ipc05G0005720 AT5G39785.5 0 0 hypothetical protein (DUF1666);(source:Araport11) Ipc05G0005710 AT5G43820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0005700 AT5G39820.1 NAC domain containing protein 94 0 NAC domain containing protein 94;(source:Araport11) Ipc05G0005690 AT5G39830.1 Trypsin family protein with PDZ domain Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II. Trypsin family protein with PDZ domain-containing protein;(source:Araport11) Ipc05G0005670 AT3G55160.3 0 THADA is an orphan gene in Arabidopsis thaliana. It is the only DUF2428 domain containing protein in the genome. thyroid adenoma-associated-like protein;(source:Araport11) Ipc05G0005680 AT4G20920.5 0 0 double-stranded RNA-binding domain (DsRBD)-containing protein;(source:Araport11) Ipc05G0005660 AT1G26830.1 cullin 3 Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3;(source:Araport11) Ipc05G0005650 AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc05G0005640 AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0005630 AT5G39865.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc05G0005620 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc05G0005610 AT1G69780.1 Homeobox-leucine zipper protein family Encodes a homeodomain leucine zipper class I (HD-Zip I) protein which is expressed during the seed-to-seedling transition, regulates some of the network nodes, and affects late seedling establishment. Knock-out mutants for athb13 showed increased primary root length as compared with wild type (Col-0) seedlings, suggesting that this transcription factor is a negative regulator of early root growth, possibly repressing cell division and/or cell elongation or the length of time cells elongate. Homeobox-leucine zipper protein family;(source:Araport11) Ipc05G0005600 AT5G15080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0005590 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc05G0005580 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc05G0005570 AT3G28720.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0005560 AT2G40190.1 UDP-Glycosyltransferase superfamily protein Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0005550 AT3G28730.1 high mobility group encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC. high mobility group;(source:Araport11) Ipc05G0005540 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc05G0005530 AT5G39950.1 thioredoxin 2 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin 2;(source:Araport11) Ipc05G0005520 AT5G15070.5 0 Encodes a functional VIP1/PPIP5K-type ATP-grasp kinase that is involved in both InsP6 to InsP7 conversion and InsP7 to InsP8 conversion. It is the minor isoform in plants and is expressed in pollen. Phosphoglycerate mutase-like family protein;(source:Araport11) Ipc05G0005510 AT3G22660.1 rRNA processing protein-related 0 rRNA processing protein-like protein;(source:Araport11) Ipc05G0005500 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0005490 AT1G59710.1 Protein of unknown function (DUF569) 0 actin cross-linking protein (DUF569);(source:Araport11) Ipc05G0005480 AT1G27100.1 Actin cross-linking protein 0 Actin cross-linking protein;(source:Araport11) Ipc05G0005470 AT2G38110.1 glycerol-3-phosphate acyltransferase 6 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly. glycerol-3-phosphate acyltransferase 6;(source:Araport11) Ipc05G0005450 AT1G59650.1 Protein of unknown function (DUF1336) Encodes CW14. CW14 protein (DUF1336);(source:Araport11) Ipc05G0005460 AT5G20100.1 0 0 plant/protein;(source:Araport11) Ipc05G0005440 AT3G28450.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0005430 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0005420 AT1G74860.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0005410 AT3G28420.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc05G0005400 AT3G28370.4 0 0 spindle assembly checkpoint component;(source:Araport11) Ipc05G0005390 AT5G15020.2 SIN3-like 2 Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). SIN3-like 2;(source:Araport11) Ipc05G0005380 AT2G30050.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc05G0005370 AT5G14950.1 golgi alpha-mannosidase II Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans. golgi alpha-mannosidase II;(source:Araport11) Ipc05G0005360 AT3G01360.2 Family of unknown function (DUF716) 0 plant viral-response family protein (DUF716);(source:Araport11) Ipc05G0005350 AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0005340 AT2G04700.3 0 Encodes catalytic subunit of ferredoxin/thioredoxin reductase. ferredoxin thioredoxin reductase catalytic beta chain family protein;(source:Araport11) Ipc05G0005330 AT5G14930.2 senescence-associated gene 101 encodes an acyl hydrolase involved in senescence . senescence-associated gene 101;(source:Araport11) Ipc05G0005320 AT3G01380.2 0 0 sulfatase and phosphatidylinositolglycan class N domain-containing protein;(source:Araport11) Ipc05G0005310 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0005300 AT5G14910.2 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0005290 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0005280 AT3G28150.1 TRICHOME BIREFRINGENCE-LIKE 22 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 22;(source:Araport11) Ipc05G0005270 AT3G28150.1 TRICHOME BIREFRINGENCE-LIKE 22 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 22;(source:Araport11) Ipc05G0005260 AT1G18680.1 HNH endonuclease domain-containing protein 0 HNH endonuclease domain-containing protein;(source:Araport11) Ipc05G0005250 AT4G22310.1 Uncharacterised protein family (UPF0041) 0 Uncharacterized protein family (UPF0041);(source:Araport11) Ipc05G0005240 AT5G40240.3 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc05G0005230 AT1G63800.1 ubiquitin-conjugating enzyme 5 0 ubiquitin-conjugating enzyme 5;(source:Araport11) Ipc05G0005220 AT5G40250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0005210 AT3G01550.1 phosphoenolpyruvate (pep)/phosphate translocator 2 0 phosphoenolpyruvate (pep)/phosphate translocator 2;(source:Araport11) Ipc05G0005200 AT5G40370.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc05G0005190 AT1G55420.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc05G0005180 AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative 0 polyribonucleotide nucleotidyltransferase;(source:Araport11) Ipc05G0005170 AT3G27730.7 0 DNA helicase required for interference-sensitive meiotic crossover events. DNA helicase ROCK-N-ROLLERS;(source:Araport11) Ipc05G0005160 AT5G14540.1 Protein of unknown function (DUF1421) 0 basic salivary proline-rich-like protein (DUF1421);(source:Araport11) Ipc05G0005150 AT3G27700.2 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 0 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc05G0005140 AT5G14530.1 Transducin/WD40 repeat-like superfamily protein Encodes a low molecular weight nuclear WDR protein which displays functional homology to the Swd2 protein, an essential subunit of the yeast histone methylation COMPASS complex. APRF1 acts upstream of FLC and promotes flowering under long day conditions. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0005130 AT4G20960.1 Cytidine/deoxycytidylate deaminase family protein encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc05G0005120 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0005110 AT3G27650.1 LOB domain-containing protein 25 0 LOB domain-containing protein 25;(source:Araport11) Ipc05G0005100 AT3G27640.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0005090 AT3G24190.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0005080 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc05G0005070 AT5G40380.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 42 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 42;(source:Araport11) Ipc05G0005060 AT3G01500.2 carbonic anhydrase 1 Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells. carbonic anhydrase 1;(source:Araport11) Ipc05G0005050 AT3G01516.2 0 0 transmembrane protein;(source:Araport11) Ipc05G0005040 AT5G14660.3 0 Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427). peptide deformylase 1B;(source:Araport11) Ipc05G0005030 AT5G40350.1 myb domain protein 24 Myb24 transcription factor. Member of the R2R3 factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. MYB24 interacts with JAZ proteins, and functions redundantly with MYB21 and MYB57 to regulate stamen development. Possible positive regulator of CKL2 and 7 expression under high temperature. myb domain protein 24;(source:Araport11) Ipc05G0005020 AT3G27820.1 monodehydroascorbate reductase 4 Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 monodehydroascorbate reductase 4;(source:Araport11) Ipc05G0005010 AT3G27860.2 0 0 Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc05G0005000 AT5G14680.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc05G0004990 AT5G40740.1 0 Encodes a conserved AUGMIN subunit 6 (AUG6) which is known to be involved in microtuble nucleation. Mutants affect both male and female gametogenesis. HAUS augmin-like complex subunit;(source:Araport11) Ipc05G0004980 AT3G26020.6 0 Encodes protein phosphatase 2A (PP2A) B Primeeta subunit. Targeted to nucleus and cytosol. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc05G0004970 AT5G23340.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc05G0004960 AT3G27320.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0004950 AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc05G0004940 AT5G40690.1 0 0 histone-lysine N-methyltransferase trithorax-like protein;(source:Araport11) Ipc05G0004930 AT5G40690.1 0 0 histone-lysine N-methyltransferase trithorax-like protein;(source:Araport11) Ipc05G0004920 AT5G16340.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0004910 #N/A #N/A #N/A #N/A Ipc05G0004900 AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein 0 PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) Ipc05G0004890 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc05G0004880 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc05G0004870 AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein 0 RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc05G0004860 AT5G40640.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0004850 AT5G14360.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc05G0004840 AT3G27400.2 0 Encodes a pectate lyase involved in response to nematodes. Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0004830 AT3G01660.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0004820 AT5G41880.1 DNA primases;DNA primases 0 DNA primase POLA3;(source:Araport11) Ipc05G0004810 AT1G70610.1 transporter associated with antigen processing protein 1 member of TAP subfamily transporter associated with antigen processing protein 1;(source:Araport11) Ipc05G0004800 AT5G40510.1 Sucrase/ferredoxin-like family protein 0 Sucrase/ferredoxin-like family protein;(source:Araport11) Ipc05G0004790 AT1G04840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0004780 AT5G14500.1 aldose 1-epimerase family protein 0 aldose 1-epimerase family protein;(source:Araport11) Ipc05G0004770 AT5G40530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0004760 AT3G08040.2 MATE efflux family protein Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. MATE efflux family protein;(source:Araport11) Ipc05G0004750 AT1G71990.1 fucosyltransferase 13 This gene encodes a Lewis-type alpha 1,4-fucosyltransferase fucosyltransferase 13;(source:Araport11) Ipc05G0004740 AT5G50180.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0004720 AT3G01640.2 0 AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc05G0004700 AT3G01640.1 glucuronokinase G AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc05G0004680 AT5G40470.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc05G0004730 AT3G01640.2 0 AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc05G0004710 AT3G01640.1 glucuronokinase G AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc05G0004690 AT5G40470.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc05G0004670 AT5G40460.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc05G0004660 AT5G40450.2 0 Encodes a member of a plant gene family, APK_ORTHOMCL5144,of unknown function. RBB1 is localized to the cytosol and involved in vacuolar biogenesis and organization. RBB1 mutants have increased number of vacuolar bulbs and fewer trans-vacuolar strands. A-kinase anchor-like protein;(source:Araport11) Ipc05G0004650 AT1G19860.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc05G0004640 AT5G14895.1 0 0 NHL domain protein;(source:Araport11) Ipc05G0004630 AT5G14870.1 cyclic nucleotide-gated channel 18 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth and pollen tube guidance to ovules. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. Also functions as a Ca2+ permeable channel. cyclic nucleotide-gated channel 18;(source:Araport11) Ipc05G0004620 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc05G0004610 AT3G01490.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0004600 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0004590 AT3G27960.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0004580 AT5G40760.2 0 Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.The mRNA is cell-to-cell mobile. glucose-6-phosphate dehydrogenase 6;(source:Araport11) Ipc05G0004570 AT3G26000.1 Ribonuclease inhibitor RIPF1 is an F-Box E3 ligase that interacts with the ABA receptor RCAR3 and appears to be responsible for facilitating its turnover. Ribonuclease inhibitor;(source:Araport11) Ipc05G0004560 AT5G40780.1 lysine histidine transporter 1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. lysine histidine transporter 1;(source:Araport11) Ipc05G0004550 AT3G27260.4 0 Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain global transcription factor group E8;(source:Araport11) Ipc05G0004540 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0004530 AT5G40800.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0004520 AT5G14260.3 Rubisco methyltransferase family protein 0 Rubisco methyltransferase family protein;(source:Araport11) Ipc05G0004510 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc05G0004500 AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc05G0004490 AT5G14250.1 Proteasome component (PCI) domain protein Encodes subunit 3 of the COP9 signalosome. Proteasome component (PCI) domain protein;(source:Araport11) Ipc05G0004480 AT3G01830.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0004470 AT3G01840.1 Protein kinase superfamily protein Encodes a putative LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it was determined to be a pseudo kinase since lack of the ATP-binding P-loop in the kinase domain. Protein kinase superfamily protein;(source:Araport11) Ipc05G0004460 AT1G21650.3 Preprotein translocase SecA family protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. Preprotein translocase SecA family protein;(source:Araport11) Ipc05G0004450 AT3G27210.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0004440 AT2G39230.1 LATERAL ORGAN JUNCTION Encodes a pentatricopeptide protein (LOJ) that is specifically expressed in lateral organ junctions. LATERAL ORGAN JUNCTION;(source:Araport11) Ipc05G0004430 AT5G14180.1 Myzus persicae-induced lipase 1 0 Myzus persicae-induced lipase 1;(source:Araport11) Ipc05G0004420 AT3G27200.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc05G0004410 AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1 Encodes a protein that with uridine kinase but not uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1;(source:Araport11) Ipc05G0004400 AT3G27180.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0004390 AT3G27150.2 0 Target gene of MIR2111-5p. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc05G0004380 AT5G14170.1 SWIB/MDM2 domain superfamily protein CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates. Also named as SWP73B, a subunit of the SWI/SNF chromatin remodeling complex. Acts as important modulator of major developmental pathways. SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc05G0004370 AT3G01910.1 sulfite oxidase Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite. sulfite oxidase;(source:Araport11) Ipc05G0004360 AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0004350 AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0004340 AT3G27050.1 0 0 plant/protein;(source:Araport11) Ipc05G0004330 AT5G50460.1 secE/sec61-gamma protein transport protein 0 secE/sec61-gamma protein transport protein;(source:Araport11) Ipc05G0004320 AT5G14130.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0004310 AT3G01930.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0004300 AT3G27030.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0004290 AT3G27027.1 Protein of unknown function (DUF 3339) 0 GPI-anchored-like protein (DUF 3339);(source:Araport11) Ipc05G0004280 AT5G11470.2 0 SG1 is a Bromo-Adjacent Homology (BAH) domain containing protein involved in CHG methylation within genebodies. Loss of function results in pleiotrophic developmental effects that increase after 4 generations. bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc05G0004270 AT1G63110.1 GPI transamidase subunit PIG-U 0 GPI transamidase subunit PIG-U;(source:Araport11) Ipc05G0004260 AT5G14105.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0004250 AT3G27020.1 YELLOW STRIPE like 6 Arabidopsis thaliana metal-nicotianamine transporter YSL6 YELLOW STRIPE like 6;(source:Araport11) Ipc05G0004240 AT5G13990.1 exocyst subunit exo70 family protein C2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. This particular member is expressed in pollen and is involved in pollen tube elongation. Found in the cytoplasm and surprisingly, not found in the plasma membrane and is not found to colocalize with or interact with core exocyst subunits. exocyst subunit exo70 family protein C2;(source:Araport11) Ipc05G0004230 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0004220 AT5G14400.2 0 Encodes a brassinosteroid C-22 hydroxylase. cytochrome P450, family 724, subfamily A, polypeptide 1;(source:Araport11) Ipc05G0004210 AT1G12930.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0004200 AT3G54900.1 CAX interacting protein 1 A.thaliana PICOT protein.It activates CAX1 gene Calcium transport activity.In other organisms, PICOT proteins appear to play a negative regulatory role in cellular stress responses. CAX interacting protein 1;(source:Araport11) Ipc05G0004190 AT3G26670.4 0 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc05G0004180 AT5G13950.4 0 0 nuclear factor kappa-B-binding protein;(source:Araport11) Ipc05G0004170 AT2G28850.1 cytochrome P450, family 710, subfamily A, polypeptide 3 member of CYP710A cytochrome P450, family 710, subfamily A, polypeptide 3;(source:Araport11) Ipc05G0004160 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc05G0004150 AT2G22690.2 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc05G0004140 AT3G26730.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0004130 AT3G26790.1 AP2/B3-like transcriptional factor family protein Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc05G0004120 AT1G12830.1 0 0 nucleolin;(source:Araport11) Ipc05G0004110 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0004100 AT4G02235.1 AGAMOUS-like 51 0 AGAMOUS-like 51;(source:Araport11) Ipc05G0004090 AT2G20490.3 0 0 nucleolar RNA-binding Nop10p family protein;(source:Araport11) Ipc05G0004080 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc05G0004070 AT5G14020.5 0 0 Endosomal targeting BRO1-like domain-containing protein;(source:Araport11) Ipc05G0004060 AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein Encodes KNUCKLES (KNU), a C2H2-type zinc finger protein with a conserved transcriptional repression motif. Mediates the repression of WUS in floral meristem determinacy control. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc05G0004050 AT3G02040.1 senescence-related gene 3 Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation. The mRNA is cell-to-cell mobile. senescence-related gene 3;(source:Araport11) Ipc05G0004040 AT3G26950.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0004030 AT4G01660.1 ABC transporter 1 Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant The mRNA is cell-to-cell mobile. ABC transporter 1;(source:Araport11) Ipc05G0004020 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0004010 AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative 0 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11) Ipc05G0004000 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc05G0003990 AT3G27010.2 0 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20;(source:Araport11) Ipc05G0003980 AT3G06040.3 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 0 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11) Ipc05G0003970 AT1G79620.1 Leucine-rich repeat protein kinase family protein VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0003960 AT3G59980.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0003950 AT5G14540.1 Protein of unknown function (DUF1421) 0 basic salivary proline-rich-like protein (DUF1421);(source:Araport11) Ipc05G0003940 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc05G0003930 AT2G31890.1 RAP Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance. Alpha helical repeat protein; only member of the OPR (octotricopeptide repeat) protein family in land plants. RAP;(source:Araport11) Ipc05G0003920 AT3G02050.1 K+ uptake transporter 3 potassium transporter KUP3p (KUP3) K+ uptake transporter 3;(source:Araport11) Ipc05G0003910 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0003900 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0003890 AT2G43970.1 RNA-binding protein 0 RNA-binding protein;(source:Araport11) Ipc05G0003880 AT1G70360.2 0 0 F-box family protein;(source:Araport11) Ipc05G0003870 AT1G23780.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0003860 AT2G43900.1 Endonuclease/exonuclease/phosphatase family protein Encodes a 5-inositol-phosphate phosphatase, that, in vitro, shows activity against IP(1,4,5). Endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc05G0003850 AT1G23360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0003840 AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0003830 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc05G0003820 AT5G50375.1 cyclopropyl isomerase Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2 cyclopropyl isomerase;(source:Araport11) Ipc05G0003810 AT3G04910.1 with no lysine (K) kinase 1 Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. with no lysine (K) kinase 1;(source:Araport11) Ipc05G0003800 AT4G36160.2 0 Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants. NAC domain containing protein 76;(source:Araport11) Ipc05G0003790 AT3G04890.1 Uncharacterized conserved protein (DUF2358) 0 adenine phosphoribosyltransferase-like protein, putative (DUF2358);(source:Araport11) Ipc05G0003780 AT3G04880.1 DNA-damage-repair/toleration protein (DRT102) encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes). DNA-damage-repair/toleration protein (DRT102);(source:Araport11) Ipc05G0003770 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0003760 AT5G58140.7 0 Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.The mRNA is cell-to-cell mobile. phototropin 2;(source:Araport11) Ipc05G0003750 AT5G28220.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc05G0003740 AT3G04820.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc05G0003730 AT3G11010.2 0 0 receptor like protein 34;(source:Araport11) Ipc05G0003720 AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf106 0 Bacterial sec-independent translocation protein mttA/Hcf106;(source:Araport11) Ipc05G0003710 AT5G28770.2 bZIP transcription factor family protein BASIC LEUCINE ZIPPER protein which regulates the circadian oscillator gene PSEUDO RESPONSE REGULATOR7 (PRR7) to change the circadian phase in response to sugars. It upregulates PRR7 in response to low energy. bZIP63 and PRR7 are required for correct oscillator phase under light/dark cycles. bZIP protein BZO2H3 mRNA, partial cds bZIP transcription factor family protein;(source:Araport11) Ipc05G0003700 AT5G28840.2 GDP-D-mannose 3',5'-epimerase Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose. GDP-D-mannose 3,5-epimerase;(source:Araport11) Ipc05G0003690 AT5G14740.5 carbonic anhydrase 2 Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform. carbonic anhydrase 2;(source:Araport11) Ipc05G0003680 AT1G47820.2 0 0 hypothetical protein;(source:Araport11) Ipc05G0003670 AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc05G0003660 AT1G54460.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc05G0003650 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc05G0003640 AT4G14970.3 0 Encodes a protein that is required for meiotic homologous recombination and acts in parallel to both MUTS HOMOLOG 4 (AtMSH4), known for its role in promoting interfering cross-overs (COs) and MMS AND UV SENSITIVE 81 (AtMUS81), known for its role in the formation of non-interfering COs. fanconi anemia group D2 protein;(source:Araport11) Ipc05G0003630 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0003620 AT1G09960.1 sucrose transporter 4 low affinity (10mM) sucrose transporter in sieve elements (phloem) sucrose transporter 4;(source:Araport11) Ipc05G0003610 AT2G04700.3 0 Encodes catalytic subunit of ferredoxin/thioredoxin reductase. ferredoxin thioredoxin reductase catalytic beta chain family protein;(source:Araport11) Ipc05G0003600 AT3G11010.6 0 0 receptor like protein 34;(source:Araport11) Ipc05G0003590 AT5G44700.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc05G0003580 AT2G33170.2 0 0 Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc05G0003560 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc05G0003570 AT2G33030.1 receptor like protein 25 0 receptor like protein 25;(source:Araport11) Ipc05G0003550 AT3G28890.2 receptor like protein 43 0 receptor like protein 43;(source:Araport11) Ipc05G0003540 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0003530 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc05G0003520 AT3G11010.2 0 0 receptor like protein 34;(source:Araport11) Ipc05G0003510 AT3G11010.2 0 0 receptor like protein 34;(source:Araport11) Ipc05G0003500 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc05G0003480 AT5G41670.4 0 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc05G0003490 AT5G41670.4 0 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc05G0003470 AT3G28890.2 receptor like protein 43 0 receptor like protein 43;(source:Araport11) Ipc05G0003460 AT3G04570.1 AT-hook motif nuclear-localized protein 19 0 AT-hook motif nuclear-localized protein 19;(source:Araport11) Ipc05G0003450 AT4G08850.2 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc05G0003440 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc05G0003430 AT3G28890.2 receptor like protein 43 0 receptor like protein 43;(source:Araport11) Ipc05G0003420 AT3G04620.1 Alba DNA/RNA-binding protein Target promoter of the male germline-specific transcription factor DUO1. Alba DNA/RNA-binding protein;(source:Araport11) Ipc05G0003410 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0003400 AT2G27140.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc05G0003390 AT5G04930.1 aminophospholipid ATPase 1 Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 1;(source:Araport11) Ipc05G0003380 AT5G18440.2 0 Encodes NUFIP that directs assembly of C/D snoRNP (small nucleolar ribonucleoprotein). GATA zinc finger protein;(source:Araport11) Ipc05G0003370 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0003360 AT3G15356.1 Legume lectin family protein 0 Legume lectin family protein;(source:Araport11) Ipc05G0003350 AT4G08870.1 Arginase/deacetylase superfamily protein Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. It is involved in the defense response to B.cinerea. Arginase/deacetylase superfamily protein;(source:Araport11) Ipc05G0003340 AT5G50350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0003330 AT3G54320.3 Integrase-type DNA-binding superfamily protein WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0003320 AT2G27050.1 ETHYLENE-INSENSITIVE3-like 1 ethylene-insensitive3-like1 (EIL1) The mRNA is cell-to-cell mobile. ETHYLENE-INSENSITIVE3-like 1;(source:Araport11) Ipc05G0003310 AT5G04990.1 SAD1/UNC-84 domain protein 1 Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with WPP domain interacting-proteins (WIPs). It is involved in maintaining the elongated nuclear shape of epidermal cells. SAD1/UNC-84 domain protein 1;(source:Araport11) Ipc05G0003300 AT1G71080.1 RNA polymerase II transcription elongation factor 0 RNA polymerase II transcription elongation factor;(source:Araport11) Ipc05G0003290 AT3G10540.1 3-phosphoinositide-dependent protein kinase 0 3-phosphoinositide-dependent protein kinase;(source:Araport11) Ipc05G0003280 AT3G09650.1 Tetratricopeptide repeat (TPR)-like superfamily protein RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0003270 #N/A #N/A #N/A #N/A Ipc05G0003260 AT2G28470.5 0 putative beta-galactosidase (BGAL8 gene) beta-galactosidase 8;(source:Araport11) Ipc05G0003250 AT3G53540.1 0 0 afadin;(source:Araport11) Ipc05G0003240 AT3G10860.2 0 0 Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11) Ipc05G0003230 AT5G02580.1 Plant protein 1589 of unknown function 0 argininosuccinate lyase;(source:Araport11) Ipc05G0003220 AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc05G0003210 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc05G0003200 AT2G37440.3 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc05G0003190 AT3G52960.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc05G0003180 AT5G59840.1 Ras-related small GTP-binding family protein 0 Ras-related small GTP-binding family protein;(source:Araport11) Ipc05G0003170 AT4G16390.1 pentatricopeptide (PPR) repeat-containing protein Encodes a pentatricopeptide repeat protein, SVR7 (SUPPRESSOR OF VARIEGATION7), required for FtsH-mediated chloroplast biogenesis. It is involved in accumulation and translation of chloroplast ATP synthase subunits. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc05G0003160 AT3G53630.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0003150 AT5G22030.1 ubiquitin-specific protease 8 0 ubiquitin-specific protease 8;(source:Araport11) Ipc05G0003140 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003130 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc05G0003120 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003080 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003090 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003100 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003110 AT1G12260.2 0 Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants. NAC 007;(source:Araport11) Ipc05G0003070 AT1G62700.2 0 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. NAC (No apical meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0003060 AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc05G0003050 AT2G37510.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0003040 AT2G37520.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc05G0003030 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0003020 AT1G26820.1 ribonuclease 3 Encodes ribonuclease RNS3. ribonuclease 3;(source:Araport11) Ipc05G0003010 AT5G02540.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0003000 AT3G53720.1 cation/H+ exchanger 20 member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells. cation/H+ exchanger 20;(source:Araport11) Ipc05G0002990 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0002980 AT2G28780.1 0 0 P-hydroxybenzoic acid efflux pump subunit;(source:Araport11) Ipc05G0002970 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc05G0002960 AT5G02500.1 heat shock cognate protein 70-1 encodes a member of heat shock protein 70 family. heat shock cognate protein 70-1;(source:Araport11) Ipc05G0002950 #N/A #N/A #N/A #N/A Ipc05G0002940 AT2G37580.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0002930 AT5G03415.1 Transcription factor DP Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. Transcription factor DP;(source:Araport11) Ipc05G0002920 AT3G55370.1 OBF-binding protein 3 Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. OBF-binding protein 3;(source:Araport11) Ipc05G0002910 AT1G44130.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0002900 AT5G02440.1 0 0 60S ribosomal protein L36;(source:Araport11) Ipc05G0002890 AT2G37670.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0002880 AT1G07440.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0002870 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0002860 AT3G09410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc05G0002850 AT2G28890.1 poltergeist like 4 Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. poltergeist like 4;(source:Araport11) Ipc05G0002840 AT4G27790.1 Calcium-binding EF hand family protein 0 Calcium-binding EF hand family protein;(source:Araport11) Ipc05G0002830 AT5G02390.3 0 Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc05G0002820 AT3G09390.2 0 metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage metallothionein 2A;(source:Araport11) Ipc05G0002810 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc05G0002800 AT3G27030.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0002790 AT2G28930.2 protein kinase 1B 0 protein kinase 1B;(source:Araport11) Ipc05G0002780 AT5G02260.1 expansin A9 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A9;(source:Araport11) Ipc05G0002770 AT2G29050.1 RHOMBOID-like 1 0 RHOMBOID-like 1;(source:Araport11) Ipc05G0002760 AT2G02148.5 0 0 PPR containing protein;(source:Araport11) Ipc05G0002750 AT5G23880.1 cleavage and polyadenylation specificity factor 100 Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus. cleavage and polyadenylation specificity factor 100;(source:Araport11) Ipc05G0002740 AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc05G0002730 AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc05G0002720 AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc05G0002710 AT4G31140.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc05G0002700 AT4G31150.3 0 0 endonuclease V family protein;(source:Araport11) Ipc05G0002690 AT3G43800.1 glutathione S-transferase tau 27 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). The mRNA is cell-to-cell mobile. glutathione S-transferase tau 27;(source:Araport11) Ipc05G0002680 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0002670 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0002660 AT2G37710.1 receptor lectin kinase Induced in response to Salicylic acid. The mRNA is cell-to-cell mobile. receptor lectin kinase;(source:Araport11) Ipc05G0002650 AT4G04320.2 malonyl-CoA decarboxylase family protein 0 malonyl-CoA decarboxylase family protein;(source:Araport11) Ipc05G0002640 AT1G80770.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0002630 AT5G02100.1 Oxysterol-binding family protein Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. Oxysterol-binding family protein;(source:Araport11) Ipc05G0002620 AT2G37650.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc05G0002610 AT2G31680.1 RAB GTPase homolog A5D 0 RAB GTPase homolog A5D;(source:Araport11) Ipc05G0002600 AT5G02230.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0002590 AT5G43290.1 WRKY DNA-binding protein 49 member of WRKY Transcription Factor; Group II-c WRKY DNA-binding protein 49;(source:Araport11) Ipc05G0002580 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc05G0002570 AT3G54680.1 proteophosphoglycan-related 0 proteophosphoglycan-like protein;(source:Araport11) Ipc05G0002560 AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc05G0002550 AT2G18760.7 0 0 chromatin remodeling 8;(source:Araport11) Ipc05G0002540 AT5G20980.2 methionine synthase 3 encodes a plastidic methionine synthase, involved in methionine de novo synthesis in the chloroplast methionine synthase 3;(source:Araport11) Ipc05G0002530 AT5G07770.1 Actin-binding FH2 protein 0 Actin-binding FH2 protein;(source:Araport11) Ipc05G0002520 AT3G09320.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0002510 AT3G09320.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0002500 AT5G60020.1 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc05G0002490 AT5G02160.1 0 Zinc-finger domain containing protein involved in abiotic stress response. Possesses an N-terminal transit peptide followed by a hydrophobic domain and a zinc-finger domain. Despite the presence of a zinc-finger domain (C4-type) with two CXXCXGXG conserved repeats, characteristic of DNAJ protein, the conserved J domain is absent in FIP. Interacts with FtsH5. Gene expression levels are reduced and negatively regulates stress response genes during stress conditions. transmembrane protein;(source:Araport11) Ipc15G0014920 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0014930 AT4G32790.3 0 0 Exostosin family protein;(source:Araport11) Ipc15G0014940 AT2G24740.1 SET domain group 21 Encodes a SU(VAR)3-9 homolog, a SET domain protein (Homology Subgroup V; Orthology Group 1). Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. This protein is a putative histone methyltransferase (predicted to methylate H3K9/20) related to the the Drosophila Su(var)3-9 and mammalian G9a proteins. SET domain group 21;(source:Araport11) Ipc15G0014950 AT5G11700.2 0 0 ephrin type-B receptor;(source:Araport11) Ipc15G0014960 AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc15G0014970 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0014980 #N/A #N/A #N/A #N/A Ipc15G0014990 AT2G38640.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc15G0015000 AT1G67280.1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein Encodes a Ni+ dependent glyoxylase. Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein;(source:Araport11) Ipc15G0015010 AT4G32780.2 0 FORKED-LIKE family member, part of Group 2 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. phosphoinositide binding protein;(source:Araport11) Ipc15G0015030 AT4G28880.4 0 Member of CKL gene family (CKL-A group) casein kinase I-like 3;(source:Araport11) Ipc15G0015020 AT2G01410.1 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc15G0015040 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc15G0015050 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc15G0015060 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015070 AT5G54440.2 0 Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis. Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. CLUB;(source:Araport11) Ipc15G0015080 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0015090 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015100 AT3G16180.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015110 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc15G0015120 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc15G0015130 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015140 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015150 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc15G0015160 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0015170 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0015180 AT4G28940.1 Phosphorylase superfamily protein 0 Phosphorylase superfamily protein;(source:Araport11) Ipc15G0015190 AT4G29000.1 Tesmin/TSO1-like CXC domain-containing protein 0 Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11) Ipc15G0015200 AT5G25770.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0015210 AT5G25760.2 peroxin4 mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. peroxin4;(source:Araport11) Ipc15G0015220 AT4G32760.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc15G0015230 AT4G32750.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0015240 AT5G25757.1 RNA polymerase I-associated factor PAF67 0 RNA polymerase I-associated factor PAF67;(source:Araport11) Ipc15G0015250 AT1G22430.3 0 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc15G0015260 AT1G64570.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc15G0015270 AT3G54120.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc15G0015280 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc15G0015290 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0015300 AT1G14800.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0015310 AT5G14720.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0015320 AT5G01160.2 0 Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. RING/U-box superfamily protein;(source:Araport11) Ipc15G0015330 AT3G21352.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0015340 AT1G22440.1 Zinc-binding alcohol dehydrogenase family protein 0 Zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc15G0015350 AT5G03320.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0015360 AT4G32730.5 0 Encodes a putative c-myb-like transcription factor with three MYB repeats. Homeodomain-like protein;(source:Araport11) Ipc15G0015370 AT3G09560.4 0 The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 μM Pi. Lipin family protein;(source:Araport11) Ipc15G0015380 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc15G0015390 AT4G28530.1 NAC domain containing protein 74 Member of NAC family of transcription factors. Along with NAC2, KIR1 positively regulates programmed cell death of stigmatic tissue. NAC domain containing protein 74;(source:Araport11) Ipc15G0015400 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc15G0015410 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc15G0015420 #N/A #N/A #N/A #N/A Ipc15G0015430 AT5G25640.1 Rhomboid-related intramembrane serine protease family protein 0 Rhomboid-related intramembrane serine protease family protein;(source:Araport11) Ipc15G0015440 AT1G69480.2 0 0 EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc15G0015450 AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0015460 AT3G07060.1 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc15G0015470 AT5G12470.1 Protein of unknown function (DUF3411) 0 UvrABC system C protein, putative (DUF3411);(source:Araport11) Ipc15G0015480 AT2G16090.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0015490 AT5G11480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0015500 AT1G15250.2 0 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc15G0015510 #N/A #N/A #N/A #N/A Ipc15G0015520 AT5G25620.1 Flavin-binding monooxygenase family protein Encodes a member of a family of flavin monooxygenases with an important role in auxin biosynthesis. YUC6 possesses an additional thiol-reductase activity that confers drought resistance independently of auxin biosynthesis. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc15G0015530 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0015540 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc15G0015550 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc15G0015560 AT3G29360.2 UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein;(source:Araport11) Ipc15G0015570 AT4G14190.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0015580 AT5G25610.1 BURP domain-containing protein responsive to dehydration 22 (RD22) mediated by ABA BURP domain-containing protein;(source:Araport11) Ipc15G0015590 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0015600 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0015610 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc15G0015620 AT3G22150.2 0 Involved in RNA editing of plastid atpF and mitochondrial nad5. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0015630 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0015640 AT4G24480.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0015650 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0015660 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0015670 #N/A #N/A #N/A #N/A Ipc15G0015680 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0015690 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc15G0015700 AT5G25610.1 BURP domain-containing protein responsive to dehydration 22 (RD22) mediated by ABA BURP domain-containing protein;(source:Araport11) Ipc15G0015710 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0015720 AT1G30410.3 0 member of MRP subfamily multidrug resistance-associated protein 13;(source:Araport11) Ipc15G0015730 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0015740 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0015750 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc15G0015760 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0015770 AT1G32310.1 0 Encodes a plant-specific negative regulator of the APC/C complex. It is expressed during embryogenesis and early plant development and plays a key role in organ size control. Mutants are defective in mitosis I of pollen development, resulting in pollen without sperm nuclei. valine-tRNA ligase;(source:Araport11) Ipc15G0015780 AT1G32320.1 MAP kinase kinase 10 member of MAP Kinase Kinase MAP kinase kinase 10;(source:Araport11) Ipc15G0015790 AT4G32700.2 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding Encodes a DNA polymerase required for microhomology mediated repair of DNA double strand breaks and is required for T-DNA integration. The protein contains two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. MUS308 and mammalian DNA polymerase-like protein;(source:Araport11) Ipc15G0015800 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0015810 #N/A #N/A #N/A #N/A Ipc15G0015820 AT3G24350.1 syntaxin of plants 32 member of Glycoside Hydrolase Family 17 syntaxin of plants 32;(source:Araport11) Ipc15G0015830 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0015840 AT3G24350.1 syntaxin of plants 32 member of Glycoside Hydrolase Family 17 syntaxin of plants 32;(source:Araport11) Ipc15G0015850 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0015860 AT4G09800.1 S18 ribosomal protein encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex S18 ribosomal protein;(source:Araport11) Ipc15G0015870 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc15G0015880 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0015890 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc15G0015900 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc15G0015910 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0015920 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0019020 AT1G21540.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0019030 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0019040 AT3G44510.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0019050 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc01G0019060 AT2G15490.3 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc01G0019070 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0019080 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0019090 AT3G44510.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0019100 AT2G27510.1 ferredoxin 3 0 ferredoxin 3;(source:Araport11) Ipc01G0019110 AT2G27500.2 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc01G0019120 AT3G25220.1 FK506-binding protein 15 kD-1 immunophilin (FKBP15-1) FK506-binding protein 15 kD-1;(source:Araport11) Ipc01G0019130 AT5G21970.2 0 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0019140 AT2G41700.2 ATP-binding cassette A1 0 ATP-binding cassette A1;(source:Araport11) Ipc01G0019150 AT4G01400.1 0 Pentatricopeptide Repeat Protein involved in splicing of nad4, nad 5, nad 1 and nad2 introns which affects biogenesis of the respiratory complex I. oligomeric golgi complex subunit-like protein;(source:Araport11) Ipc01G0019160 AT1G26120.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0019170 AT2G30330.1 GCN5L1 family protein Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport. GCN5L1 family protein;(source:Araport11) Ipc01G0019180 AT5G22400.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc01G0019190 AT5G22390.1 Protein of unknown function (DUF3049) 0 FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc01G0019200 AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0019210 AT5G17820.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc01G0019220 AT1G02335.1 germin-like protein subfamily 2 member 2 precursor Encodes a plasodesmata-located protein involved in regulating primary root growth by controlling phloem-mediated allocation of resources between the primary and lateral root meristems. germin-like protein subfamily 2 member 2 precursor;(source:Araport11) Ipc01G0019230 AT3G62020.2 germin-like protein 10 germin-like protein (GLP10) germin-like protein 10;(source:Araport11) Ipc01G0019240 AT2G27385.2 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc01G0019250 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc01G0019260 AT5G22360.1 vesicle-associated membrane protein 714 Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. vesicle-associated membrane protein 714;(source:Araport11) Ipc01G0019270 AT3G10230.1 lycopene cyclase Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene. lycopene cyclase;(source:Araport11) Ipc01G0019280 AT2G27370.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc01G0019290 AT2G27350.2 OTU-like cysteine protease family protein Encodes an otubain-like histone deubiquitinase involved in chromatin modification and regulation of plant gene expression. OTU-like cysteine protease family protein;(source:Araport11) Ipc01G0019300 AT3G44330.1 0 0 M28 Zn-peptidase nicastrin;(source:Araport11) Ipc01G0019310 AT5G22340.1 0 0 NF-kappa-B inhibitor-like protein;(source:Araport11) Ipc01G0019320 AT5G22320.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0019330 AT2G27310.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0019340 AT3G11590.1 0 0 golgin family A protein;(source:Araport11) Ipc01G0019350 AT5G22280.1 0 0 peptidyl-prolyl cis-trans isomerase G;(source:Araport11) Ipc01G0019360 AT3G11600.1 0 One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations. E3 ubiquitin-protein ligase;(source:Araport11) Ipc01G0019370 AT3G52560.1 ubiquitin E2 variant 1D-4 MMZ4/UEV1D encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1D can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ4/UEV1D transcripts are found in most plant organs, like the other three MMZ/UEV1 family members, but it is normally present at higher levels. In addition, MMZ4/UEV1D is the only family member whose transcripts are detected in pollen. However, MMZ4/UEV1D transcript levels do not appear to be stress-inducible. uev1d-1 mutants are more sensitive than wild type plants to the DNA damaging agent MMS in seed germination and pollen germination assays. ubiquitin E2 variant 1D-4;(source:Araport11) Ipc01G0019380 AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0019390 AT3G52525.1 ovate family protein 6 0 ovate family protein 6;(source:Araport11) Ipc01G0019400 AT2G27290.1 Protein of unknown function (DUF1279) 0 FAM210B-like protein, putative (DUF1279);(source:Araport11) Ipc01G0019410 AT5G22220.2 E2F transcription factor 1 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. E2F transcription factor 1;(source:Araport11) Ipc01G0019420 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0019430 AT3G44220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0019440 AT3G44220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0019450 AT3G44200.2 0 Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. serine/threonine-protein kinase NEK5;(source:Araport11) Ipc01G0019460 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0019470 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0019480 AT3G44190.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc01G0019490 AT3G44190.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc01G0019500 AT2G01820.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0019510 AT2G27230.2 transcription factor-related Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. transcription factor-like protein;(source:Araport11) Ipc01G0019520 AT5G47370.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis. Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein;(source:Araport11) Ipc01G0019530 AT2G35940.3 BEL1-like homeodomain 1 Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. BEL1-like homeodomain 1;(source:Araport11) Ipc01G0019540 AT5G22120.1 0 0 coiled-coil protein;(source:Araport11) Ipc01G0019550 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc01G0019560 AT5G12330.2 Lateral root primordium (LRP) protein-related A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. Lateral root primordium (LRP) protein-like protein;(source:Araport11) Ipc01G0019570 AT2G35930.1 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23;(source:Araport11) Ipc01G0019580 AT4G15000.1 Ribosomal L27e protein family 0 Ribosomal L27e protein family;(source:Araport11) Ipc01G0019590 AT5G15820.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0019600 AT3G22190.4 0 0 IQ-domain 5;(source:Araport11) Ipc01G0019610 AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc01G0019620 AT1G08410.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a large 60S subunit nuclear export GTPase 1 that is required for 40S maturation and is involved in ribosome biogenesis and affects multiple auxin-regulated development processes. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0019630 AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2 0 BRI1 suppressor 1 (BSU1)-like 2;(source:Araport11) Ipc01G0019640 AT5G22080.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0019650 AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a putative LysM-containing receptor-like kinase LYK4. Shares overlapping function with LYK5 in mediating chitin-triggered immune responses. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc01G0019660 AT5G22090.2 Protein of unknown function (DUF3049) EAR1 is a negative regulator of ABA signaling that enhances the activity of all six clade A PP2Cs (ABI1, ABI2, HAB1, HAB2, AHG1, AHG3) by interacting with and releasing the N-terminal autoinhibition of these proteins. EAR1 indirectly affects OST1 activity through enhancing ABI1 activity. The EAR1 141-287 fragment is sufficient for the functioning of EAR1 in ABA responses; the 131-248 region harbors an intrinsically disordered region and only 249-278 can form a predicted regular structure. EAR1 is located in the ER, nuclei, and cytoplasm; ABA signaling promotes the translocation of EAR1 from the ER and/or cytoplasm to the nucleus. Mutations showed that it functions in seed germination, primary root growth, and drought tolerance. FAF-like protein (DUF3049);(source:Araport11) Ipc01G0019670 AT1G11180.3 0 0 Secretory carrier membrane protein (SCAMP) family protein;(source:Araport11) Ipc01G0019680 AT5G22000.3 RING-H2 group F2A encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. RING-H2 group F2A;(source:Araport11) Ipc01G0019690 AT5G09920.1 RNA polymerase II, Rpb4, core protein Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4) RNA polymerase II, Rpb4, core protein;(source:Araport11) Ipc01G0019700 AT1G08465.1 Plant-specific transcription factor YABBY family protein Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc01G0019710 AT5G22030.1 ubiquitin-specific protease 8 0 ubiquitin-specific protease 8;(source:Araport11) Ipc01G0019720 AT5G22040.3 0 0 ubiquitin carboxyl-terminal hydrolase;(source:Araport11) Ipc01G0019730 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0019740 AT5G21990.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Functions as a chaperone receptor at the chloroplast outer envelope, mediating Hsp70-dependent protein targeting to chloroplasts. It has been localized to the ER membrane, interacts with the Sec translocon, and has a potential function in post-translational protein transport into the ER. The mRNA is cell-to-cell mobile. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0019750 AT5G06570.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0019760 AT5G20930.1 Protein kinase superfamily protein Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development and is involved in the regulation of RNA interference. Expression localized to the developing style by stage 13. Protein kinase superfamily protein;(source:Araport11) Ipc01G0019770 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc01G0019780 AT3G17640.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0019790 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc01G0019800 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc01G0019810 AT3G43610.1 Spc97 / Spc98 family of spindle pole body (SBP) component 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc01G0019820 AT3G62800.2 double-stranded-RNA-binding protein 4 Encodes a nuclear dsRNA-binding protein DRB4 that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. Also has an impact on polymerase IV-dependent siRNA levels. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression. double-stranded-RNA-binding protein 4;(source:Araport11) Ipc01G0019830 AT3G20770.1 Ethylene insensitive 3 family protein Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores. Ethylene insensitive 3 family protein;(source:Araport11) Ipc01G0019840 AT1G74670.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc01G0019850 AT2G27060.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0019860 AT2G27080.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0019870 AT3G10572.1 3-phosphoinositide-dependent protein kinase-1, putative APEM9 is required for both PTS1- and PTS2-dependent protein transport. APEM9 interacts with PEX6 in BiFC assay and mating-based Split ubiquitin system. BiFC data shows that APEM9 is required for peroxisomal localization of PEX1-PEX6 complex. These results indicate that APEM9 functions like mammalian PEX26 and yeast PEX15. 3-phosphoinositide-dependent protein kinase-1;(source:Araport11) Ipc01G0019880 AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc01G0019890 AT2G27100.1 C2H2 zinc-finger protein SERRATE (SE) Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia and forms a complex with both AtCBC (cap binding complex) proteins to control alternative splicing. C2H2 zinc-finger protein SERRATE (SE);(source:Araport11) Ipc01G0019900 AT3G19184.2 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0019910 AT5G42700.2 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0019920 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0019930 AT1G64750.2 deletion of SUV3 suppressor 1(I) 0 deletion of SUV3 suppressor 1(I);(source:Araport11) Ipc01G0019940 AT3G08010.1 RNA binding Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II. RNA binding protein;(source:Araport11) Ipc01G0019950 AT5G21060.1 Glyceraldehyde-3-phosphate dehydrogenase-like family protein 0 Glyceraldehyde-3-phosphate dehydrogenase-like family protein;(source:Araport11) Ipc01G0019960 AT3G43720.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0019970 AT5G06100.5 0 Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. myb domain protein 33;(source:Araport11) Ipc01G0019980 AT3G03740.1 BTB-POZ and MATH domain 4 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 4;(source:Araport11) Ipc01G0019990 AT5G20990.1 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling. molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1);(source:Araport11) Ipc01G0020000 AT2G43760.3 molybdopterin biosynthesis MoaE family protein 0 molybdopterin biosynthesis MoaE family protein;(source:Araport11) Ipc01G0020010 AT5G26960.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0020020 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0020030 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0020040 AT3G12490.1 cystatin B Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress). cystatin B;(source:Araport11) Ipc01G0020050 AT2G26930.1 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 4-(cytidine 5-phospho)-2-C-methyl-D-erithritol kinase;(source:Araport11) Ipc01G0020060 AT5G19500.1 Tryptophan/tyrosine permease Encodes a putative amino acid transporter that localizes to the chloroplast inner envelope membrane. Tryptophan/tyrosine permease;(source:Araport11) Ipc01G0020070 AT3G02950.2 0 Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. Tho complex subunit 7/Mft1p;(source:Araport11) Ipc01G0020080 AT5G12110.1 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 0 elongation factor 1-beta 1;(source:Araport11) Ipc01G0020090 AT2G41060.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0020100 AT3G44220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0020110 AT5G56200.1 C2H2 type zinc finger transcription factor family Encodes a transcription factor expressed in the female gametophyte. C2H2 type zinc finger transcription factor family;(source:Araport11) Ipc01G0020120 AT5G21160.1 LA RNA-binding protein Encodes a protein with sequence similarity to mRNA binding proteins from humans. LARP1a is involved in mRNA degradation in response to heat stress. Upon heat stress LARP1a interacts with XRN4 and appears to be responsible for addressing XRN4 to the polysome. LARP1/XRN4 double mutants are impaired in thermotolerance and lower levels of heat induced RNA turnover. LA RNA-binding protein;(source:Araport11) Ipc01G0020130 AT1G33110.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc01G0020140 AT1G33110.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc01G0020150 AT3G07100.1 Sec23/Sec24 protein transport family protein Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology. Has epistatic interactions with AT1G55350, AT3G59420, and AT3G10525. Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0020160 AT2G27030.3 calmodulin 5 encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile. calmodulin 5;(source:Araport11) Ipc01G0020170 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0020180 AT4G35280.1 C2H2-like zinc finger protein Target promoter of the male germline-specific transcription factor DUO1. C2H2-like zinc finger protein;(source:Araport11) Ipc01G0020190 AT2G26990.1 proteasome family protein Represses photomorphogenesis and induces skotomorphogenesis in the dark. proteasome family protein;(source:Araport11) Ipc01G0020200 AT2G26980.3 CBL-interacting protein kinase 3 encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. CBL-interacting protein kinase 3;(source:Araport11) Ipc01G0020210 AT2G02800.2 protein kinase 2B Encodes protein kinase APK2b. protein kinase 2B;(source:Araport11) Ipc01G0020220 AT1G74350.1 Intron maturase, type II family protein Encodes nMAT4, a maturase factor required for nad1 pre-mRNA processing and maturation. Essential for holocomplex I biogenesis in Arabidopsis mitochondria. Intron maturase, type II family protein;(source:Araport11) Ipc01G0020230 AT2G26770.3 0 Encodes a plant-specific actin binding protein SCAB1 (STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN1). SCAB1 stabilizes actin filaments and regulates stomatal movement. plectin-like protein;(source:Araport11) Ipc01G0020240 AT4G34670.1 Ribosomal protein S3Ae 0 Ribosomal protein S3Ae;(source:Araport11) Ipc01G0020250 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0020260 AT3G02400.2 0 Contains a single exon and encodes a ~66-kD protein with a Forkhead- Associated domain. Binds the promoter of PEX11b and expression is correlated with negative regulation of PEX11b. SMAD/FHA domain-containing protein;(source:Araport11) Ipc01G0020270 AT1G14320.1 Ribosomal protein L16p/L10e family protein Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself. Ribosomal protein L16p/L10e family protein;(source:Araport11) Ipc01G0020280 AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent;(source:Araport11) Ipc01G0020290 AT5G58003.1 C-terminal domain phosphatase-like 4 Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences. C-terminal domain phosphatase-like 4;(source:Araport11) Ipc01G0020300 AT1G08500.1 early nodulin-like protein 18 0 early nodulin-like protein 18;(source:Araport11) Ipc01G0020310 AT4G24940.1 SUMO-activating enzyme 1A Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 1A;(source:Araport11) Ipc01G0020320 AT5G12180.1 calcium-dependent protein kinase 17 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17;(source:Araport11) Ipc01G0020330 AT3G12250.7 0 basic leucine zipper transcription factor involved in the activation of SA-responsive genes. TGACG motif-binding factor 6;(source:Araport11) Ipc01G0020340 AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein 0 RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc01G0020350 AT3G11830.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc01G0020360 AT2G26850.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0020370 AT2G26810.2 Putative methyltransferase family protein 0 Putative methyltransferase family protein;(source:Araport11) Ipc01G0020380 AT2G26260.1 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 Encodes an enzyme with 3β-hydroxysteroid dehydrogenase/C4-decarboxylase activity in vitro. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the Arabidopsis gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound. 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2;(source:Araport11) Ipc01G0020390 AT2G26800.1 Aldolase superfamily protein Mutant has increased seed ile, leu and val as well as his and arg. Aldolase superfamily protein;(source:Araport11) Ipc01G0020400 AT1G20696.1 high mobility group B3 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B3;(source:Araport11) Ipc01G0020410 AT5G12170.2 CRT (chloroquine-resistance transporter)-like transporter 3 Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection. The mRNA is cell-to-cell mobile. CRT (chloroquine-resistance transporter)-like transporter 3;(source:Araport11) Ipc01G0020420 AT1G63500.1 Protein kinase protein with tetratricopeptide repeat domain 0 kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc01G0020430 AT5G13500.3 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc01G0020440 AT3G07910.1 0 0 reactive oxygen species modulator-like protein;(source:Araport11) Ipc01G0020450 AT1G77450.1 NAC domain containing protein 32 0 NAC domain containing protein 32;(source:Araport11) Ipc01G0020460 AT5G17380.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc01G0020470 AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc01G0020480 AT3G57090.2 0 Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0020490 AT4G31530.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0020500 AT1G66220.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc01G0020510 AT1G50420.1 scarecrow-like 3 Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). scarecrow-like 3;(source:Araport11) Ipc01G0020520 AT3G10185.1 Gibberellin-regulated family protein Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein Gibberellin-regulated family protein;(source:Araport11) Ipc01G0020530 AT5G37055.1 HIT-type Zinc finger family protein Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes. HIT-type Zinc finger family protein;(source:Araport11) Ipc01G0020540 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0020550 AT5G12400.1 DNA binding;zinc ion binding;DNA binding 0 PHD-finger and DNA binding domain-containing protein;(source:Araport11) Ipc01G0020560 AT1G08520.1 ALBINA 1 Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal. ALBINA 1;(source:Araport11) Ipc01G0020570 AT3G20060.1 ubiquitin-conjugating enzyme19 Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus. ubiquitin-conjugating enzyme19;(source:Araport11) Ipc01G0020580 #N/A #N/A #N/A #N/A Ipc01G0020590 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0020600 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0020610 AT3G07530.2 0 0 integrator complex subunit;(source:Araport11) Ipc01G0020620 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc01G0020630 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0020640 AT4G34040.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0020650 AT4G04890.2 0 Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 2;(source:Araport11) Ipc01G0020660 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0020670 AT5G03990.1 0 0 FK506-binding-like protein;(source:Araport11) Ipc01G0020680 AT5G03990.1 0 0 FK506-binding-like protein;(source:Araport11) Ipc01G0020690 AT1G50450.1 Saccharopine dehydrogenase 0 Saccharopine dehydrogenase;(source:Araport11) Ipc01G0020700 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc01G0020710 AT3G21100.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0020720 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc01G0020730 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc01G0020740 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0020750 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0020760 AT3G21090.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc01G0020770 AT3G21090.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc01G0020780 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc01G0020790 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc01G0020800 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc01G0020810 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc01G0020820 AT5G12470.1 Protein of unknown function (DUF3411) 0 UvrABC system C protein, putative (DUF3411);(source:Araport11) Ipc01G0020830 AT4G36010.2 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc01G0020840 AT1G51440.1 alpha/beta-Hydrolases superfamily protein Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0020850 #N/A #N/A #N/A #N/A Ipc01G0020860 AT1G74630.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0020870 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc01G0020880 AT1G51340.5 0 Encodes a root citrate transporter which together with the root malate transporter ALMT1 are the primary mechanism of aluminum tolerance. MATE efflux family protein;(source:Araport11) Ipc01G0020890 AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0020900 AT1G51355.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc01G0020910 AT5G12840.4 nuclear factor Y, subunit A1 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. nuclear factor Y, subunit A1;(source:Araport11) Ipc01G0020920 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0020930 AT2G01870.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0020940 AT4G21090.3 MITOCHONDRIAL FERREDOXIN 2 0 MITOCHONDRIAL FERREDOXIN 2;(source:Araport11) Ipc01G0020950 AT1G77450.1 NAC domain containing protein 32 0 NAC domain containing protein 32;(source:Araport11) Ipc01G0020960 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0020970 AT1G77450.1 NAC domain containing protein 32 0 NAC domain containing protein 32;(source:Araport11) Ipc01G0020980 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0020990 AT3G48480.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc01G0021000 AT4G36250.1 aldehyde dehydrogenase 3F1 Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. aldehyde dehydrogenase 3F1;(source:Araport11) Ipc01G0021010 AT5G19350.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0021020 AT3G57650.1 lysophosphatidyl acyltransferase 2 Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity. lysophosphatidyl acyltransferase 2;(source:Araport11) Ipc01G0021030 AT1G16120.1 wall associated kinase-like 1 Encodes a WAK-like receptor-like kinase with a cytoplasmic Ser/Thr protein kinase domain and an extracellular domain with EGF-like repeats. wall associated kinase-like 1;(source:Araport11) Ipc01G0021040 AT2G23140.4 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc01G0021050 AT4G24020.2 0 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc01G0021060 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc01G0021070 AT2G23140.4 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc01G0021080 AT3G24870.1 Helicase/SANT-associated, DNA binding protein 0 Helicase/SANT-associated, DNA binding protein;(source:Araport11) Ipc01G0021090 AT2G47550.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0021100 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0021110 AT4G24020.2 0 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc01G0021120 AT1G64530.1 Plant regulator RWP-RK family protein 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc01G0021130 AT3G44940.1 Protein of unknown function (DUF1635) 0 enabled-like protein (DUF1635);(source:Araport11) Ipc01G0021140 AT4G24020.2 0 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor.The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc01G0021150 AT3G08580.2 ADP/ATP carrier 1 mitochondrial ADP/ATP carrier ADP/ATP carrier 1;(source:Araport11) Ipc01G0021160 AT5G13490.2 ADP/ATP carrier 2 Encodes mitochondrial ADP/ATP carrier ADP/ATP carrier 2;(source:Araport11) Ipc01G0021170 AT5G19620.1 outer envelope protein of 80 kDa AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality. outer envelope protein of 80 kDa;(source:Araport11) Ipc01G0021180 AT3G57670.1 C2H2-type zinc finger family protein Encodes a a C2H2/C2HC zinc finger transcription factor specifically expressed in the transmitting tract and involved in transmitting tract development and pollen tube growth.Acts redundantly with WIP4 and WIP5 to determine distal cell fate in the root. MP binds to regulatory elements within the NTT locus and likely regulates its expression. C2H2-type zinc finger family protein;(source:Araport11) Ipc01G0021190 AT3G20870.3 0 0 ZIP metal ion transporter family;(source:Araport11) Ipc01G0021200 AT3G51790.1 transmembrane protein G1P-related 1 Encodes a heme-binding protein located in the mitochondrial inner membrane that is involved in cytochrome c maturation. transmembrane protein G1P-related 1;(source:Araport11) Ipc01G0021210 AT3G20860.1 NIMA-related kinase 5 Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. Serine/Threonine kinase catalytic domain protein;(source:Araport11) Ipc01G0021220 AT5G13070.1 MSF1-like family protein 0 MSF1-like family protein;(source:Araport11) Ipc01G0021230 AT2G24400.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc01G0021240 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc01G0021250 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0021260 AT4G14110.1 COP9 signalosome, subunit CSN8 Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex. COP9 signalosome, subunit CSN8;(source:Araport11) Ipc01G0021270 AT3G20830.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc01G0021280 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc01G0021290 AT3G13440.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0021300 AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix-type transcription factor involved in photoperiodism flowering. Binds to the E-box cis-element in the CONSTANS (CO) promoter to regulate flowering. Interacts with CFL1 and along with CFLAP2 negatively regulates cuticle development. Binds to the potassium channel gene KAT1 as a dimer. The DNA-binding capacity is inhibited in response to ABA through phosphorylation-dependent monomerization. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0021310 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0021320 AT4G12070.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0021330 AT1G31320.1 LOB domain-containing protein 4 0 LOB domain-containing protein 4;(source:Araport11) Ipc01G0021340 AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain Encodes a homologue of spliceosome disassembly factor NTR1. Required for correct expression and splicing of DOG1, a regulator of seed dormancy. The mRNA is cell-to-cell mobile. GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein;(source:Araport11) Ipc01G0021350 AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain Encodes a homologue of spliceosome disassembly factor NTR1. Required for correct expression and splicing of DOG1, a regulator of seed dormancy. The mRNA is cell-to-cell mobile. GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein;(source:Araport11) Ipc01G0021360 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021370 AT3G05660.1 receptor like protein 33 0 receptor like protein 33;(source:Araport11) Ipc01G0021380 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021390 AT5G07280.1 Leucine-rich repeat transmembrane protein kinase Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc01G0021400 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021410 AT5G12900.1 0 0 DNA double-strand break repair RAD50 ATPase;(source:Araport11) Ipc01G0021420 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0021430 AT5G10560.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc01G0021440 AT1G74190.1 receptor like protein 15 0 receptor like protein 15;(source:Araport11) Ipc01G0021450 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021460 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021470 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021480 AT1G73165.1 CLAVATA3/ESR-RELATED 1 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 1;(source:Araport11) Ipc01G0021490 AT4G19420.4 0 0 Pectinacetylesterase family protein;(source:Araport11) Ipc01G0021500 AT2G46930.1 Pectinacetylesterase family protein Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves. Pectinacetylesterase family protein;(source:Araport11) Ipc01G0021510 AT4G14320.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc01G0021520 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc01G0021530 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0021540 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0021550 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc01G0021560 AT3G45140.1 lipoxygenase 2 Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection. The mRNA is cell-to-cell mobile. lipoxygenase 2;(source:Araport11) Ipc01G0021570 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc01G0021580 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc01G0021590 AT4G04830.1 methionine sulfoxide reductase B5 0 methionine sulfoxide reductase B5;(source:Araport11) Ipc01G0021600 AT1G77310.1 0 0 wound-responsive family protein;(source:Araport11) Ipc01G0021610 AT3G02940.2 0 Encodes a putative transcription factor (MYB107). myb domain protein 107;(source:Araport11) Ipc01G0021620 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0021630 AT5G13030.1 0 Chloroplast localized homolog of SELO. Loss of function mutants have reduced production of reactive oxygen species (ROS) and higher ROS scavenging. selenoprotein O;(source:Araport11) Ipc01G0021640 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0021650 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0021660 AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein;(source:Araport11) Ipc01G0021670 AT5G19630.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0021680 AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein. KHZ1 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ2. khz1 mutants are late flowering and double mutants with khz2 are even more late flowering. Overexpression leads to increased rates of leaf senescence. KH domain-containing protein / zinc finger (CCCH type) family protein;(source:Araport11) Ipc01G0021690 AT5G13000.1 glucan synthase-like 12 encodes a gene similar to callose synthase glucan synthase-like 12;(source:Araport11) Ipc01G0021700 AT3G07160.3 0 Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850). glucan synthase-like 10;(source:Araport11) Ipc01G0021710 AT5G19900.5 0 0 PRLI-interacting factor;(source:Araport11) Ipc01G0021720 AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0021730 AT5G19890.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc01G0021740 AT1G05890.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0021750 AT2G44140.3 0 0 Peptidase family C54 protein;(source:Araport11) Ipc01G0021760 AT5G27720.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc01G0021770 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc01G0021780 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0021790 AT5G60160.1 Zn-dependent exopeptidases superfamily protein Vacuolar aspartyl aminopeptidase which also functions as a molecular chaperone. Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc01G0021800 AT2G44150.1 histone-lysine N-methyltransferase ASHH3 Encodes a protein-lysine N-methyltransferase. Located in ER. histone-lysine N-methyltransferase ASHH3;(source:Araport11) Ipc01G0021810 AT3G58040.3 0 Encodes a RING finger domain containing protein that interacts with AtRAP2.2 and interacts with ATG6, MUSE13/14 resulting in ubiquitination of ATG6.The mRNA is cell-to-cell mobile. seven in absentia of Arabidopsis 2;(source:Araport11) Ipc01G0021820 AT3G11750.1 Dihydroneopterin aldolase Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo. Dihydroneopterin aldolase;(source:Araport11) Ipc01G0021830 AT2G41110.2 calmodulin 2 Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile. calmodulin 2;(source:Araport11) Ipc01G0021840 AT4G10620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0021850 AT2G34860.2 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc01G0021860 AT3G13670.1 Protein kinase family protein MUT9-like protein kinase. Contributes to phosphorylation of photoexcited CRY2. Interaction with CRY2 occurs via the non catalytic PPKC domain.MLK4 phosphorylates the conserved H2A serine 95 residue. Synthetic mutants that cannot phosphorylate H2AS95 fail to complement the late flowering phenotype suggesting that MLK4 promotes long day flowering via phosphorylation.MLK4 is required for H2A295 phosphorylation of GI. Protein kinase family protein;(source:Araport11) Ipc01G0021870 AT2G38400.1 alanine:glyoxylate aminotransferase 3 alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA, alanine:glyoxylate aminotransferase 3;(source:Araport11) Ipc01G0021880 AT4G31570.6 0 0 nucleoporin;(source:Araport11) Ipc01G0021890 AT1G05550.3 Protein of unknown function (DUF295) 0 hypothetical protein (DUF295);(source:Araport11) Ipc01G0021900 AT3G59140.1 multidrug resistance-associated protein 14 member of MRP subfamily multidrug resistance-associated protein 14;(source:Araport11) Ipc01G0021910 AT1G69770.1 chromomethylase 3 Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3;(source:Araport11) Ipc01G0021920 AT2G20480.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0021930 AT1G64530.1 Plant regulator RWP-RK family protein 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc01G0021940 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0021950 AT3G18280.2 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0021960 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0021970 AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0021980 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0021990 AT4G32040.2 0 A member of Class II KN1-like homeodomain transcription factors factors (together with KNAT3 and KNAT4), with greatest homology to the maize knox1 homeobox protein. Regulates photomorphogenic responses and represses late steps in gibberellin biosynthesis. KNAT5 promoter activity showed cell-type specific pattern along longitudinal root axis, primarily in the epidermis of the distal end of primary root elongation zone. homeobox protein knotted-1-like 5;(source:Araport11) Ipc01G0022000 AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022010 AT5G47040.1 lon protease 2 Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 2;(source:Araport11) Ipc01G0022020 AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022030 AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022040 AT1G43667.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022050 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022060 AT3G32930.2 0 Protein of unknown function. Locus is correlated with bacterial hypersensitive response, expression is reduced after injection with avrRpm1. 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc01G0022070 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc01G0022080 AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0022090 AT1G55265.1 Protein of unknown function, DUF538 0 DUF538 family protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc01G0022100 AT3G58500.1 protein phosphatase 2A-4 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. protein phosphatase 2A-4;(source:Araport11) Ipc01G0022110 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc01G0022120 AT2G33030.1 receptor like protein 25 0 receptor like protein 25;(source:Araport11) Ipc01G0022130 AT2G20240.1 Protein of unknown function (DUF3741) 0 GPI-anchored adhesin-like protein, putative (DUF3741);(source:Araport11) Ipc01G0022140 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0022150 AT4G08810.1 calcium ion binding Calcium binding protein involved in cryptochrome and phytochrome coaction calcium ion binding protein;(source:Araport11) Ipc01G0022160 AT5G11950.3 0 Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210. Putative lysine decarboxylase family protein;(source:Araport11) Ipc01G0022170 AT3G13540.1 myb domain protein 5 Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches). myb domain protein 5;(source:Araport11) Ipc01G0022180 AT2G31510.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc01G0022190 AT5G19830.1 Peptidyl-tRNA hydrolase family protein 0 Peptidyl-tRNA hydrolase family protein;(source:Araport11) Ipc01G0022200 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0022210 AT2G17250.1 CCAAT-binding factor Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and homozygous embryos arrest in the globular stage of development. CCAAT-binding factor;(source:Araport11) Ipc01G0022220 AT5G19760.1 Mitochondrial substrate carrier family protein Encodes a novel mitochondrial carrier capable of transporting both dicarboxylates (such as malate, oxaloacetate, oxoglutarate, and maleate) and tricarboxylates (such as citrate, isocitrate, cis-aconitate, and trans-aconitate). Mitochondrial substrate carrier family protein;(source:Araport11) Ipc01G0022230 AT1G05060.1 0 0 coiled-coil protein;(source:Araport11) Ipc01G0022240 AT5G16140.2 Peptidyl-tRNA hydrolase family protein 0 Peptidyl-tRNA hydrolase family protein;(source:Araport11) Ipc01G0022250 #N/A #N/A #N/A #N/A Ipc01G0022260 AT4G38220.1 Peptidase M20/M25/M40 family protein 0 Peptidase M20/M25/M40 family protein;(source:Araport11) Ipc01G0022270 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0022280 AT5G21970.2 0 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0022290 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc01G0022300 AT3G25220.1 FK506-binding protein 15 kD-1 immunophilin (FKBP15-1) FK506-binding protein 15 kD-1;(source:Araport11) Ipc01G0022310 AT1G55340.2 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc01G0022320 AT3G13510.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal peptidase, putative (DUF239);(source:Araport11) Ipc01G0022330 AT3G13480.2 0 0 nuclear polyadenylated RNA-binding protein;(source:Araport11) Ipc01G0022340 AT1G27595.1 0 Encodes a protein of unknown function containing a Symplekin C domain that is involved in negative regulation of glucose response. Mutants show increased sensitivity to glucose with a variety of assays. symplekin;(source:Araport11) Ipc01G0022350 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0022360 #N/A #N/A #N/A #N/A Ipc01G0022370 AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0022380 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc01G0022390 AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc01G0022400 AT3G13400.2 0 0 SKU5 similar 13;(source:Araport11) Ipc01G0022410 AT1G55530.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0022420 AT5G56350.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc01G0022430 AT5G15260.2 0 0 ribosomal protein L34e superfamily protein;(source:Araport11) Ipc01G0022440 AT3G13460.1 evolutionarily conserved C-terminal region 2 Physically interacts with CIPK1. evolutionarily conserved C-terminal region 2;(source:Araport11) Ipc01G0022450 AT4G26330.2 0 0 Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc01G0022460 AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc01G0022470 AT1G70460.1 root hair specific 10 Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). root hair specific 10;(source:Araport11) Ipc01G0022480 AT5G36110.2 0 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc01G0022490 AT1G55570.1 SKU5 similar 12 0 SKU5 similar 12;(source:Araport11) Ipc01G0022500 AT5G25110.1 CBL-interacting protein kinase 25 member of AtCIPKs CBL-interacting protein kinase 25;(source:Araport11) Ipc01G0022510 AT1G55570.1 SKU5 similar 12 0 SKU5 similar 12;(source:Araport11) Ipc01G0022520 AT4G20350.6 0 0 oxidoreductase;(source:Araport11) Ipc01G0022530 AT3G12280.1 retinoblastoma-related 1 Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA. Functions as a positive regulator of the developmental switch from embryonic heterotrophic growth to autotrophic growth.ChIP studies indicate that one class of targets of RBR1 are transposable elements. retinoblastoma-related 1;(source:Araport11) Ipc01G0022540 AT4G10250.1 HSP20-like chaperones superfamily protein Columbia endomembrane-localized small heat shock protein HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0022550 AT1G33360.1 ATP-dependent Clp protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease;(source:Araport11) Ipc01G0022560 AT1G64290.1 F-box protein-related 0 F-box protein-like protein;(source:Araport11) Ipc01G0022570 AT1G33290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0022580 AT2G16600.1 rotamase CYP 3 Encodes cytosolic cyclophilin ROC3. The mRNA is cell-to-cell mobile. rotamase CYP 3;(source:Araport11) Ipc01G0022590 AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase 0 nucleotide-rhamnose synthase/epimerase-reductase;(source:Araport11) Ipc01G0022600 AT1G71250.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0022610 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0022620 AT5G32613.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0022630 AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0022640 AT1G71260.1 WHIRLY 2 Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway. WHIRLY 2;(source:Araport11) Ipc01G0022650 AT5G24670.4 0 A protein coding gene with unknown function. The 5?UTR of this gene overlaps with a RNA coding gene TER2. TER2 (GenBank accession no. HQ401285) encodes a putative template sequence corresponding to 1.5 copies of the Arabidopsis telomere repeat (PNAS 2011, 108:73-78). Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc01G0022660 AT5G62060.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0022670 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0022680 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc01G0022690 AT4G10120.3 0 Encodes a protein with putative sucrose-phosphate synthase activity. Sucrose-phosphate synthase family protein;(source:Araport11) Ipc01G0022700 AT1G71350.1 eukaryotic translation initiation factor SUI1 family protein 0 eukaryotic translation initiation factor SUI1 family protein;(source:Araport11) Ipc01G0022710 AT1G71350.1 eukaryotic translation initiation factor SUI1 family protein 0 eukaryotic translation initiation factor SUI1 family protein;(source:Araport11) Ipc01G0022720 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc01G0022730 AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Deadenylase. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0022740 AT1G71360.1 Galactose-binding protein Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. Galactose-binding protein;(source:Araport11) Ipc01G0022750 AT2G46290.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0022760 AT1G71380.1 cellulase 3 0 cellulase 3;(source:Araport11) Ipc01G0022770 AT1G33590.2 0 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0022780 AT1G33590.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0022790 AT5G39030.2 0 Involved in growth adaptation upon exposure to metal ions. Contributes together with the other MDS genes to the complex network of CrRLK1Ls that positively and negatively affect growth. Protein kinase superfamily protein;(source:Araport11) Ipc01G0022800 AT4G10100.3 co-factor for nitrate, reductase and xanthine dehydrogenase 7 molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling. co-factor for nitrate, reductase and xanthine dehydrogenase 7;(source:Araport11) Ipc01G0022810 AT4G13530.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0022820 AT1G07160.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0022830 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0022840 AT1G31230.1 aspartate kinase-homoserine dehydrogenase i Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase i;(source:Araport11) Ipc01G0022850 AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0022860 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0022870 AT1G22850.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc01G0022880 AT1G05190.1 Ribosomal protein L6 family Encodes the plastid 50S ribosomal protein L6. Ribosomal protein L6 family;(source:Araport11) Ipc01G0022890 AT4G10070.1 KH domain-containing protein 0 KH domain-containing protein;(source:Araport11) Ipc01G0022900 AT5G49900.3 0 0 Beta-glucosidase, GBA2 type family protein;(source:Araport11) Ipc01G0022910 AT4G10050.1 esterase/lipase/thioesterase family protein 0 esterase/lipase/thioesterase family protein;(source:Araport11) Ipc01G0022920 AT4G10040.1 cytochrome c-2 Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers. Double mutants with CYTC-1 accumulate starch during the day, have delayed growth and development and reduced GA and DELLA proteins linking cellular metabolism and GA homeostasis. cytochrome c-2;(source:Araport11) Ipc01G0022940 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0022930 AT4G19510.6 0 0 Disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0022950 AT2G44530.2 Phosphoribosyltransferase family protein 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0022960 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0022970 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0022980 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0022990 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0023000 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc01G0023010 AT1G72920.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc01G0002350 AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0002360 AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0002370 AT3G04240.2 0 Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0002380 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc01G0002390 AT1G51660.1 mitogen-activated protein kinase kinase 4 Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. The mRNA is cell-to-cell mobile. mitogen-activated protein kinase kinase 4;(source:Araport11) Ipc01G0002400 AT2G05540.1 Glycine-rich protein family 0 Glycine-rich protein family;(source:Araport11) Ipc01G0002410 #N/A #N/A #N/A #N/A Ipc01G0002420 AT2G05520.6 glycine-rich protein 3 Encodes a glycine-rich protein that is expressed mainly in stems and leaves. AtGRP3 functions in root size determination during development and in Al stress. mRNA levels are upregulated in response to ABA, salicylic acid and ethylene but downregulated in response to desiccation. The mRNA is cell-to-cell mobile. glycine-rich protein 3;(source:Araport11) Ipc01G0002430 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0002440 AT3G61050.2 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0002450 AT1G73470.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0002460 AT3G23660.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0002470 AT3G09180.3 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc01G0002480 AT3G23710.1 Tic22-like family protein 0 Tic22-like family protein;(source:Araport11) Ipc01G0002490 AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan endotransglycosylase-related protein (XTR7) xyloglucan endotransglucosylase/hydrolase 15;(source:Araport11) Ipc01G0002500 AT3G23740.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0002510 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0002520 AT1G05560.1 UDP-glucosyltransferase 75B1 A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques. UDP-glucosyltransferase 75B1;(source:Araport11) Ipc01G0002530 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc01G0002540 AT1G05560.1 UDP-glucosyltransferase 75B1 A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques. UDP-glucosyltransferase 75B1;(source:Araport11) Ipc01G0002550 AT2G17650.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0002560 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0002570 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0002580 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0002590 AT3G06480.1 DEAD box RNA helicase family protein 0 DEAD box RNA helicase family protein;(source:Araport11) Ipc01G0002600 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0002610 AT4G14080.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0002620 AT3G24520.1 heat shock transcription factor C1 member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1;(source:Araport11) Ipc01G0002630 AT5G18280.1 apyrase 2 Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. apyrase 2;(source:Araport11) Ipc01G0002640 AT4G38010.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0002650 AT5G18280.1 apyrase 2 Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. apyrase 2;(source:Araport11) Ipc01G0002660 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0002670 AT1G03610.1 Protein of unknown function (DUF789) 0 plant/protein (DUF789);(source:Araport11) Ipc01G0002680 AT3G23790.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0002690 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc01G0002700 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc01G0002710 AT3G23790.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0002720 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0002730 AT4G14040.1 selenium-binding protein 2 0 selenium-binding protein 2;(source:Araport11) Ipc01G0002740 AT4G13980.1 winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc01G0002750 AT4G13950.1 ralf-like 31 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 31;(source:Araport11) Ipc01G0002760 AT4G13940.1 S-adenosyl-L-homocysteine hydrolase Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. The mRNA is cell-to-cell mobile. S-adenosyl-L-homocysteine hydrolase;(source:Araport11) Ipc01G0002770 AT4G13930.1 serine hydroxymethyltransferase 4 Encodes a serine hydroxymethyltransferase maximally expressed in root serine hydroxymethyltransferase 4;(source:Araport11) Ipc01G0002780 AT3G23820.1 UDP-D-glucuronate 4-epimerase 6 Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. The mRNA is cell-to-cell mobile. UDP-D-glucuronate 4-epimerase 6;(source:Araport11) Ipc01G0002790 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc01G0002800 AT4G13850.3 glycine-rich RNA-binding protein 2 Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold. glycine-rich RNA-binding protein 2;(source:Araport11) Ipc01G0002810 AT5G48610.5 0 0 myb-like protein X;(source:Araport11) Ipc01G0002820 AT1G51120.1 AP2/B3 transcription factor family protein 0 AP2/B3 transcription factor family protein;(source:Araport11) Ipc01G0002830 AT3G23840.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc01G0002840 AT3G23900.2 RNA recognition motif (RRM)-containing protein 0 RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc01G0002850 AT3G50370.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0002860 AT3G23910.1 0 0 reverse transcriptase-like protein;(source:Araport11) Ipc01G0002870 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc01G0002880 AT3G50170.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc01G0002890 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0002900 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc01G0002910 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc01G0002920 #N/A #N/A #N/A #N/A Ipc01G0002930 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0002940 AT5G41150.4 0 Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins Restriction endonuclease, type II-like superfamily protein;(source:Araport11) Ipc01G0002950 AT3G25070.2 0 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is Primeguarded Prime by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.The mRNA is cell-to-cell mobile. RPM1 interacting protein 4;(source:Araport11) Ipc01G0002960 AT1G07340.1 sugar transporter 2 0 sugar transporter 2;(source:Araport11) Ipc01G0002970 AT4G22330.1 Alkaline phytoceramidase (aPHC) AtCES1 encodes a nuclear and endoplasmic reticulum localized Acyl-CoA independent ceramide synthase that is involved in sphingolipid metabolism, disease resistance, nutrient limitation, and response to salt stress. Facilitates adaptation to environmental stresses by regulating autophagy. Alkaline phytoceramidase (aPHC);(source:Araport11) Ipc01G0002980 AT5G37830.1 oxoprolinase 1 Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism. oxoprolinase 1;(source:Araport11) Ipc01G0002990 AT1G05440.1 C-8 sterol isomerases 0 C-8 sterol isomerase;(source:Araport11) Ipc01G0003000 AT4G13750.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc01G0003020 AT1G08300.2 0 0 no vein-like protein;(source:Araport11) Ipc01G0003010 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0003030 AT3G24560.3 Adenine nucleotide alpha hydrolases-like superfamily protein novel gene involved in embryogenesis Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc01G0003040 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc01G0003050 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc01G0003060 AT3G62720.2 xylosyltransferase 1 Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides. xylosyltransferase 1;(source:Araport11) Ipc01G0003070 AT4G15802.1 heat shock factor binding protein Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment. heat shock factor binding protein;(source:Araport11) Ipc01G0003080 AT1G26220.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc01G0003090 AT2G20010.1 Protein of unknown function (DUF810) 0 Gls protein (DUF810);(source:Araport11) Ipc01G0003100 AT1G74190.1 receptor like protein 15 0 receptor like protein 15;(source:Araport11) Ipc01G0003110 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0003120 AT1G74190.1 receptor like protein 15 0 receptor like protein 15;(source:Araport11) Ipc01G0003130 AT3G16565.6 0 0 threonyl and alanyl tRNA synthetase second additional domain-containing protein;(source:Araport11) Ipc01G0003140 AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. DIR1 protein is cell-to-cell mobile and is transported via phloem sap. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0003150 AT4G15780.1 vesicle-associated membrane protein 724 member of VAMP72 Gene Family vesicle-associated membrane protein 724;(source:Araport11) Ipc01G0003160 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc01G0003170 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc01G0003180 AT2G39100.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0003190 AT1G12900.1 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 0 glyceraldehyde 3-phosphate dehydrogenase A subunit 2;(source:Araport11) Ipc01G0003200 AT3G12260.1 LYR family of Fe/S cluster biogenesis protein 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc01G0003210 AT5G09270.2 0 0 transmembrane protein;(source:Araport11) Ipc01G0003220 AT3G26700.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0003230 AT5G18560.1 Integrase-type DNA-binding superfamily protein Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0003240 AT2G47850.3 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc01G0003250 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc01G0003260 AT3G21430.2 DNA binding 0 DNA binding protein;(source:Araport11) Ipc01G0003270 AT5G18540.4 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc01G0003280 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc01G0003290 AT3G21420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein LATERAL BRANCHING OXIDOREDUCTASE (LBO), encodes an oxidoreductase-like enzyme of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily. It is involved in the biosynthesis of strigolactones. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0003300 AT2G47810.1 nuclear factor Y, subunit B5 0 nuclear factor Y, subunit B5;(source:Araport11) Ipc01G0003310 AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0003320 AT2G47820.2 0 0 arginine-glutamic acid dipeptide repeat protein;(source:Araport11) Ipc01G0003330 AT3G19830.4 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0003340 AT3G21400.1 0 0 dynein beta chain, ciliary protein;(source:Araport11) Ipc01G0003350 AT5G48970.1 Mitochondrial substrate carrier family protein Encodes a mitochondrial thiamin diphosphate carrier. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc01G0003360 AT1G68020.1 UDP-Glycosyltransferase / trehalose-phosphatase family protein Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme. UDP-Glycosyltransferase / trehalose-phosphatase family protein;(source:Araport11) Ipc01G0003370 AT5G10625.1 0 0 flowering-promoting factor-like protein;(source:Araport11) Ipc01G0003390 AT4G33990.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0003380 AT1G31260.1 zinc transporter 10 precursor member of Fe(II) transporter isolog family zinc transporter 10 precursor;(source:Araport11) Ipc01G0003400 AT2G39090.1 tetratricopeptide repeat (TPR)-containing protein 0 tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0003410 AT4G15650.1 0 0 kinase-like protein;(source:Araport11) Ipc01G0003420 AT5G18640.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0003430 AT5G18620.2 chromatin remodeling factor17 Encodes a member of the A. thaliana imitation switch (AtISWI) subfamily of chromatin remodeling factors. Double mutation in CHR17 and CHR11 results in the loss of the evenly spaced nucleosome pattern in gene bodies, but does not affect nucleosome density. chromatin remodeling factor17;(source:Araport11) Ipc01G0003440 AT5G18610.3 0 Encodes a receptor-like cytoplasmic kinase that is an immediate downstream component of the chitin receptor CERK1 and contributes to the regulation of chitin-induced immunity. Protein kinase superfamily protein;(source:Araport11) Ipc01G0003450 AT3G21460.1 Glutaredoxin family protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Glutaredoxin family protein;(source:Araport11) Ipc01G0003460 AT4G15690.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc01G0003470 AT4G15640.2 0 0 adenylyl cyclase;(source:Araport11) Ipc01G0003480 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0003500 AT2G45000.1 structural constituent of nuclear pore Encodes a nucleoporin, a component of the nuclear pore complex, that appears to be a major negative regulator of auxin signalling. Loss of function mutants are embryo lethal. structural constituent of nuclear pore;(source:Araport11) Ipc01G0003490 #N/A #N/A #N/A #N/A Ipc01G0003510 AT5G04010.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0003520 AT5G06970.1 Protein of unknown function (DUF810) PATROL1 is a Munc13-like protein involved in mediating H[+]-ATPase translocation. It interacts with AHA1and is responsible for its translocation during stomatal movement. plant/protein (DUF810);(source:Araport11) Ipc01G0003530 AT5G06970.1 Protein of unknown function (DUF810) PATROL1 is a Munc13-like protein involved in mediating H[+]-ATPase translocation. It interacts with AHA1and is responsible for its translocation during stomatal movement. plant/protein (DUF810);(source:Araport11) Ipc01G0003540 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0003550 AT1G66250.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0003560 AT2G41473.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0003570 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0003580 AT1G31540.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc01G0003590 AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003600 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0003610 AT1G10586.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003620 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003630 AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003640 AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003650 AT5G17890.1 DA1-related protein 4 Encodes a protein that appears to be involved in defense responses. Contains TIR, NB-LRR and LIM domains. A gain of function allele exhibits cold dependent phenotypes including apparent activation of defense responses and an increased freezing tolerance. The mRNA is cell-to-cell mobile. DA1-related protein 4;(source:Araport11) Ipc01G0003660 AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0003670 AT2G02360.1 phloem protein 2-B10 Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.Expression is induced by SA and pathogenic bacteria. phloem protein 2-B10;(source:Araport11) Ipc01G0003680 AT2G02360.1 phloem protein 2-B10 Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.Expression is induced by SA and pathogenic bacteria. phloem protein 2-B10;(source:Araport11) Ipc01G0003690 AT2G02250.1 phloem protein 2-B2 0 phloem protein 2-B2;(source:Araport11) Ipc01G0003700 AT2G02240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0003710 AT5G60040.1 nuclear RNA polymerase C1 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1;(source:Araport11) Ipc01G0003720 AT3G03300.3 dicer-like 2 Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. dicer-like 2;(source:Araport11) Ipc01G0003730 AT2G33100.2 0 encodes a gene similar to cellulose synthase cellulose synthase-like D1;(source:Araport11) Ipc01G0003740 AT1G04730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Necessary for sister chromatid cohesion. Acts in synergy with ETG1. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0003750 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc01G0003760 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc01G0003770 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc01G0003780 AT3G02750.3 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0003790 AT5G66430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0008130 AT2G26660.1 SPX domain gene 2 0 SPX domain-containing protein 2 (SPX2);(source:Araport11) Ipc03G0008140 AT2G41480.1 Peroxidase superfamily protein Encodes a cationic cell-wall-bound peroxidase homolog that is involved in the lignification of cell walls. peroxidase superfamily protein;(source:Araport11) Ipc03G0008150 AT2G26670.1 Plant haem oxygenase (decyclizing) family protein Encodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast. Plant heme oxygenase (decyclizing) family protein;(source:Araport11) Ipc03G0008160 AT5G62200.1 Embryo-specific protein 3, (ATS3) 0 Embryo-specific protein 3, (ATS3);(source:Araport11) Ipc03G0008170 AT2G41475.1 Embryo-specific protein 3, (ATS3) 0 Embryo-specific protein 3, (ATS3);(source:Araport11) Ipc03G0008180 AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc03G0008190 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc03G0008200 AT2G35100.1 Exostosin family protein Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems. Exostosin family protein;(source:Araport11) Ipc03G0008210 AT3G05320.3 0 Golgi localized protein with similarity to protein O-fucosyltransferases. Mutants show lower seed set/reduced fertility. Mutant pollen fails to compete with wild type due to the inability to penetrate the stigma-style boundary. O-fucosyltransferase family protein;(source:Araport11) Ipc03G0008220 AT2G26680.1 0 0 FkbM family methyltransferase;(source:Araport11) Ipc03G0008230 AT1G80170.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0008240 AT1G80170.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0008250 AT1G17350.5 0 0 NADH:ubiquinone oxidoreductase intermediate-associated protein 30;(source:Araport11) Ipc03G0008260 AT2G25520.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc03G0008270 #N/A #N/A #N/A #N/A Ipc03G0008280 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0008290 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc03G0008300 AT2G26690.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0008310 AT1G47370.1 Toll-Interleukin-Resistance (TIR) domain family protein RBA1 variant in Ag0 background is a TIR-only receptor protein that binds to the bacterial type III effector protein HopBA. The Col-0 variant, which is not expressed, is likely a psuedogene and more highly methylated than the Ag0 variant which is expressed. Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc03G0008320 AT1G23670.2 Domain of unknown function (DUF220) 0 OBP32pep protein, putative (DUF220);(source:Araport11) Ipc03G0008330 AT5G22660.2 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein 0 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc03G0008340 AT2G35930.1 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23;(source:Araport11) Ipc03G0008350 AT4G32400.1 Mitochondrial substrate carrier family protein Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc03G0008360 AT2G34160.1 Alba DNA/RNA-binding protein 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc03G0008370 AT5G20120.2 0 0 testis- and ovary-specific PAZ domain protein;(source:Araport11) Ipc03G0008380 AT1G80160.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc03G0008390 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc03G0008400 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc03G0008410 AT1G11300.2 0 The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc03G0008420 AT1G65800.1 receptor kinase 2 Encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. Together with AtPUB9, it is required for auxin-mediated lateral root development under phosphate-starved conditions. The mRNA is cell-to-cell mobile. receptor kinase 2;(source:Araport11) Ipc03G0008430 AT2G26700.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Member of AGC VIIIa Kinase gene family. Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc03G0008440 AT5G66631.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0008450 AT5G66631.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0008460 AT5G17460.5 0 0 glutamyl-tRNA (Gln) amidotransferase subunit C;(source:Araport11) Ipc03G0008470 AT5G25940.1 early nodulin-related 0 early nodulin-like protein;(source:Araport11) Ipc03G0008480 AT2G26695.2 0 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc03G0008490 AT3G19360.2 0 0 Zinc finger (CCCH-type) family protein;(source:Araport11) Ipc03G0008500 AT5G20070.1 nudix hydrolase homolog 19 0 nudix hydrolase homolog 19;(source:Araport11) Ipc03G0008510 AT5G20080.1 FAD/NAD(P)-binding oxidoreductase 0 FAD/NAD(P)-binding oxidoreductase;(source:Araport11) Ipc03G0008520 AT2G02160.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc03G0008530 AT5G20100.1 0 0 plant/protein;(source:Araport11) Ipc03G0008540 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc03G0008550 AT2G15020.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0008560 AT2G03913.1 Cysteine-rich protein Encodes a defensin-like (DEFL) family protein. Cysteine-rich protein;(source:Araport11) Ipc03G0008570 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008580 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008590 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008600 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008610 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008620 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc03G0008630 AT2G26910.1 pleiotropic drug resistance 4 Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle. pleiotropic drug resistance 4;(source:Araport11) Ipc03G0008640 AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. transcriptional corepressor LEUNIG;(source:Araport11) Ipc03G0008650 AT1G56110.1 homolog of nucleolar protein NOP56 NOP56-like protein NOP56-like pre RNA processing ribonucleoprotein;(source:Araport11) Ipc03G0008660 AT5G14170.1 SWIB/MDM2 domain superfamily protein CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates. Also named as SWP73B, a subunit of the SWI/SNF chromatin remodeling complex. Acts as important modulator of major developmental pathways. SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc03G0008670 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0008680 AT1G79220.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc03G0008690 AT3G24330.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc03G0008700 AT2G25670.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0008710 AT2G25670.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0008720 AT4G32600.2 0 0 C3H4 type zinc finger protein;(source:Araport11) Ipc03G0008730 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc03G0008740 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc03G0008750 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0008760 AT1G08510.1 fatty acyl-ACP thioesterases B Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer. fatty acyl-ACP thioesterases B;(source:Araport11) Ipc03G0008770 AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein 0 Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc03G0008780 AT4G17486.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc03G0008790 AT5G20060.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0008800 AT1G04870.2 protein arginine methyltransferase 10 Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. protein arginine methyltransferase 10;(source:Araport11) Ipc03G0008810 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0008820 AT1G68680.1 0 0 SH3/FCH domain protein;(source:Araport11) Ipc03G0008830 AT1G52720.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0008840 AT2G26650.1 K+ transporter 1 Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). K+ transporter 1;(source:Araport11) Ipc03G0008850 AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0008860 AT1G67520.5 0 0 lectin protein kinase family protein;(source:Araport11) Ipc03G0008870 AT5G19990.3 0 26S proteasome AAA-ATPase subunitThe mRNA is cell-to-cell mobile. regulatory particle triple-A ATPase 6A;(source:Araport11) Ipc03G0008880 AT5G19980.1 golgi nucleotide sugar transporter 4 Encodes a Golgi-localized nucleotide-sugar transporter. golgi nucleotide sugar transporter 4;(source:Araport11) Ipc03G0008890 AT1G14920.1 GRAS family transcription factor family protein Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. GRAS family transcription factor family protein;(source:Araport11) Ipc03G0008900 #N/A #N/A #N/A #N/A Ipc03G0008910 AT5G43810.4 0 Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development. Stabilizer of iron transporter SufD / Polynucleotidyl transferase;(source:Araport11) Ipc03G0008920 AT5G19960.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0008930 AT2G03500.1 Homeodomain-like superfamily protein Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression. Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0008940 AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0008950 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0008960 AT5G12440.8 0 0 CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11) Ipc03G0008970 AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells. Pre-mRNA splicing Prp18-interacting factor;(source:Araport11) Ipc03G0008980 AT5G19460.1 nudix hydrolase homolog 20 0 nudix hydrolase homolog 20;(source:Araport11) Ipc03G0008990 AT3G24420.1 alpha/beta-Hydrolases superfamily protein DLK2 is a divergent member of the DWARF14 family. It's expression is dependent on D14 and KAI2 but it does not appear to play a role in stringolactone metabolism. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0009000 AT3G24440.1 Fibronectin type III domain-containing protein Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM. Fibronectin type III domain-containing protein;(source:Araport11) Ipc03G0009010 AT5G19590.2 0 0 DUF538 family protein (Protein of unknown function, DUF538);(source:Araport11) Ipc03G0009020 AT3G24450.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0009030 AT4G13350.2 NSP (nuclear shuttle protein)-interacting GTPase Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection. NSP (nuclear shuttle protein)-interacting GTPase;(source:Araport11) Ipc03G0009040 AT3G24460.2 0 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc03G0009050 AT1G62440.1 leucine-rich repeat/extensin 2 encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis. leucine-rich repeat/extensin 2;(source:Araport11) Ipc03G0009060 #N/A #N/A #N/A #N/A Ipc03G0009070 AT5G27010.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0009080 AT5G19600.1 sulfate transporter 3;5 Encodes sulfate transporter Sultr3;5. sulfate transporter 3;(source:Araport11) Ipc03G0009090 AT3G24490.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 0 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11) Ipc03G0009100 AT2G17265.1 homoserine kinase Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutation of this gene results in higher level of the amino acid homoserine and resistance to downy mildew pathogen Hyaloperonospora arabidopsidis. homoserine kinase;(source:Araport11) Ipc03G0009110 AT3G24495.1 MUTS homolog 7 encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts. MUTS homolog 7;(source:Araport11) Ipc03G0009120 AT5G66960.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc03G0009130 AT3G24500.1 multiprotein bridging factor 1C One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses. multiprotein bridging factor 1C;(source:Araport11) Ipc03G0009140 AT3G24503.1 aldehyde dehydrogenase 2C4 Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively aldehyde dehydrogenase 2C4;(source:Araport11) Ipc03G0009150 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0009160 AT3G24503.1 aldehyde dehydrogenase 2C4 Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively aldehyde dehydrogenase 2C4;(source:Araport11) Ipc03G0009170 AT2G25735.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0009180 AT5G53250.1 arabinogalactan protein 22 0 arabinogalactan protein 22;(source:Araport11) Ipc03G0009190 AT3G29300.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0009200 AT5G18470.1 Curculin-like (mannose-binding) lectin family protein 0 Curculin-like (mannose-binding) lectin family protein;(source:Araport11) Ipc03G0009210 AT3G24515.1 ubiquitin-conjugating enzyme 37 0 ubiquitin-conjugating enzyme 37;(source:Araport11) Ipc03G0009220 AT1G52343.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0009230 AT3G24520.1 heat shock transcription factor C1 member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1;(source:Araport11) Ipc03G0009240 AT4G13260.1 Flavin-binding monooxygenase family protein Encodes YUC2. Catalyzes conversion of IPA (indole-3-pyruvic acid) to IAA (indole-3-acetic acid) in auxin biosynthesis pathway. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc03G0009250 AT1G15260.1 0 0 LOW protein: ATP-dependent RNA helicase-like protein;(source:Araport11) Ipc03G0009260 AT5G19650.1 ovate family protein 8 0 ovate family protein 8;(source:Araport11) Ipc03G0009270 AT3G18830.1 polyol/monosaccharide transporter 5 This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily. polyol/monosaccharide transporter 5;(source:Araport11) Ipc03G0009280 AT3G24530.1 AAA-type ATPase family protein / ankyrin repeat family protein 0 AAA-type ATPase family protein / ankyrin repeat family protein;(source:Araport11) Ipc03G0009290 AT4G13250.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II). NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0009300 AT3G24605.1 0 0 late embryogenesis abundant protein, group 2;(source:Araport11) Ipc03G0009310 AT2G20120.2 0 Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles. CONTINUOUS VASCULAR RING protein (DUF502);(source:Araport11) Ipc03G0009320 AT3G24630.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0009330 AT2G32730.1 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 0 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit;(source:Araport11) Ipc03G0009340 AT3G24620.1 RHO guanyl-nucleotide exchange factor 8 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 8;(source:Araport11) Ipc03G0009350 AT5G11520.1 aspartate aminotransferase 3 Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3;(source:Araport11) Ipc03G0009360 AT2G32230.2 0 Encodes a protein-only RNase P that is involved in the 5? cleavage of the precursor tRNAs and is able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. Mutants show a drastic reduction in the levels of mature plastid tRNA-Phe(GAA) and tRNA-Arg(ACG), limiting plastid gene expression. proteinaceous RNase P 1;(source:Araport11) Ipc03G0009370 AT3G13674.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0009380 AT4G29000.1 Tesmin/TSO1-like CXC domain-containing protein 0 Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11) Ipc03G0009390 AT4G28990.1 RNA-binding protein-related 0 RNA-binding protein-like protein;(source:Araport11) Ipc03G0009400 AT1G67300.3 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0009410 AT4G28980.3 0 Encodes a CDK-activating kinase that regulates root initial cell differentiation. Phosphorylates CDKD2 and CDKD3, but not CDKD1. Controls CDK activities and basal transcription. CDK-activating kinase 1AT;(source:Araport11) Ipc03G0009420 AT4G28950.1 RHO-related protein from plants 9 A member of ROP GTPase gene family. RHO-related protein from plants 9;(source:Araport11) Ipc03G0009430 AT1G65980.1 thioredoxin-dependent peroxidase 1 thioredoxin-dependent peroxidase thioredoxin-dependent peroxidase 1;(source:Araport11) Ipc03G0009440 AT3G06880.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0009450 AT2G24700.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc03G0009460 AT4G28940.1 Phosphorylase superfamily protein 0 Phosphorylase superfamily protein;(source:Araport11) Ipc03G0009470 AT5G18636.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc03G0009480 AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0009490 AT4G28840.1 0 Encodes TCP INTERACTOR-CONTAINING EAR MOTIF PROTEIN 1 (TIE1), an important repressor of CINCINNATA (CIN)-like TEOSINTE BRANCHED1/CYCLOIDEA/PCF (TCP) transcription factors, which are key for leaf development. mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc03G0009500 AT1G67280.1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein Encodes a Ni+ dependent glyoxylase. Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein;(source:Araport11) Ipc03G0009510 AT2G20050.1 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases 0 protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein;(source:Araport11) Ipc03G0009520 AT4G28890.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0009530 AT4G28910.3 novel interactor of JAZ Encodes a transcriptional repressor that functions in the jasmonic acid (JA) signalling pathway, root development, and has a key role in leaf development, likely due to the transcriptional regulation of CYCD3 expression. Putative interactor of JAZ;(source:Araport11) Ipc03G0009540 AT3G52040.1 0 0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;(source:Araport11) Ipc03G0009550 AT1G77210.2 sugar transporter 14 AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose. sugar transporter 14;(source:Araport11) Ipc03G0009560 AT5G19670.2 0 0 Exostosin family protein;(source:Araport11) Ipc03G0009570 AT2G33490.4 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0009580 AT2G44970.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0009590 AT4G32800.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0009600 AT1G62340.1 PA-domain containing subtilase family protein Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants PA-domain containing subtilase family protein;(source:Araport11) Ipc03G0009610 AT5G19690.1 staurosporin and temperature sensitive 3-like A encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions The mRNA is cell-to-cell mobile. staurosporin and temperature sensitive 3-like A;(source:Araport11) Ipc03G0009620 AT2G19930.2 0 0 RNA-dependent RNA polymerase family protein;(source:Araport11) Ipc03G0009630 AT5G25880.1 NADP-malic enzyme 3 The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. NADP-malic enzyme 3;(source:Araport11) Ipc03G0009640 AT1G77170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0009650 AT1G60660.1 cytochrome B5-like protein member of Cytochromes b5 cytochrome B5-like protein;(source:Araport11) Ipc03G0009660 AT2G19880.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes Glucosylceramide synthase (GCS) which catalyzes the final step in glucosylceramide (GlcCer) synthesis by transferring a glucosyl residue from UDP-Glc to the ceramide backbone. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc03G0009670 AT4G29120.1 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc03G0009680 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc03G0009690 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc03G0009700 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc03G0009710 AT2G19860.1 hexokinase 2 Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses. hexokinase 2;(source:Araport11) Ipc03G0009720 AT1G16680.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc03G0009730 AT4G29380.1 protein kinase family protein / WD-40 repeat family protein The gene encodes phosphatidylinositol 3- kinase involved in the development and germination of pollen through the biosynthesis of phosphatidylinositol 3-phosphate (PI3P). The mRNA is cell-to-cell mobile. protein kinase family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0009740 AT4G26300.5 0 0 Arginyl-tRNA synthetase, class Ic;(source:Araport11) Ipc03G0009750 AT2G19770.1 profilin 5 Encodes profilin 5, originally named profilin 4 (PRO4/PFN4). Low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Pollen-specific plant profilin present predominantly in mature pollen and growing pollen tubes. profilin 5;(source:Araport11) Ipc03G0009760 AT4G29310.1 Protein of unknown function (DUF1005) 0 DUF1005 family protein (DUF1005);(source:Araport11) Ipc03G0009770 AT4G29260.1 HAD superfamily, subfamily IIIB acid phosphatase VSP3 is a secreted acid phosphatase. HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc03G0009780 AT4G29240.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc03G0009790 AT4G29230.2 0 0 NAC domain containing protein 75;(source:Araport11) Ipc03G0009800 AT1G51980.1 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc03G0009810 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc03G0009820 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc03G0009830 AT2G19790.1 SNARE-like superfamily protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. SNARE-like superfamily protein;(source:Araport11) Ipc03G0009840 AT5G11700.2 0 0 ephrin type-B receptor;(source:Araport11) Ipc03G0009850 AT4G26260.2 myo-inositol oxygenase 4 Encodes a myo-inositol oxygenase. myo-inositol oxygenase 4;(source:Araport11) Ipc03G0009860 AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc03G0009870 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc03G0009880 AT4G29170.1 Mnd1 family protein A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis. Mnd1 family protein;(source:Araport11) Ipc03G0009890 AT2G19830.2 0 0 SNF7 family protein;(source:Araport11) Ipc03G0009900 AT5G56680.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein Encodes a putative cytosolic asparaginyl-tRNA synthetase. The mRNA is cell-to-cell mobile. Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11) Ipc03G0009910 AT4G26240.1 0 0 histone-lysine N-methyltransferase;(source:Araport11) Ipc03G0009920 AT5G56730.1 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc03G0009930 AT4G29400.1 Protein of unknown function (DUF3531) 0 oxidoreductase/transition metal ion-binding protein (DUF3531);(source:Araport11) Ipc03G0009940 AT5G56740.1 histone acetyltransferase of the GNAT family 2 Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12. histone acetyltransferase of the GNAT family 2;(source:Araport11) Ipc03G0009950 AT4G29420.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc03G0009960 AT5G05920.1 deoxyhypusine synthase Encodes a deoxyhypusine synthase. deoxyhypusine synthase;(source:Araport11) Ipc03G0009970 AT2G19710.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc03G0009980 AT2G19690.2 phospholipase A2-beta Encodes one of the four Arabidopsis phospholipase PLA2 parologs: AT2G06925 (PLA2-ALPHA), AT2G19690 (PLA2-BETA), AT4G29460 (PLA2-GAMMA) and AT4G29470 (PLA2-DELTA). Involved in pollen development and germination and tube growth. Also involved in stomatal opening in response to light. phospholipase A2-beta;(source:Araport11) Ipc03G0009990 AT4G26210.2 Mitochondrial ATP synthase subunit G protein 0 Mitochondrial ATP synthase subunit G protein;(source:Araport11) Ipc03G0010000 AT1G16280.1 RNA helicase 36 Encodes a putative DEAD-box RNA helicase. Essential for female gametogenesis. RNA helicase 36;(source:Araport11) Ipc03G0010010 AT3G42140.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0010020 AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65b. U2 snRNP auxilliary factor, large subunit, splicing factor;(source:Araport11) Ipc03G0010030 AT4G29490.1 Metallopeptidase M24 family protein 0 Metallopeptidase M24 family protein;(source:Araport11) Ipc03G0010040 AT4G29510.1 arginine methyltransferase 11 Has arginine N-methyltransferase activity. Modifies AtMBD7. arginine methyltransferase 11;(source:Araport11) Ipc03G0010050 AT5G56750.1 N-MYC downregulated-like 1 0 N-MYC downregulated-like 1;(source:Araport11) Ipc03G0010060 AT4G26180.1 Mitochondrial substrate carrier family protein Encodes a mitochondrial CoA transporter. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc03G0010070 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0010080 AT4G29540.2 bacterial transferase hexapeptide repeat-containing protein Encodes a UDP-N-acetylglucosamine acyltransferase. bacterial transferase hexapeptide repeat-containing protein;(source:Araport11) Ipc03G0010090 AT5G56840.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc03G0010100 AT2G19590.1 ACC oxidase 1 encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase ACC oxidase 1;(source:Araport11) Ipc03G0010110 AT2G19580.1 tetraspanin2 Member of TETRASPANIN family tetraspanin2;(source:Araport11) Ipc03G0010120 AT2G19570.1 cytidine deaminase 1 Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds. cytidine deaminase 1;(source:Araport11) Ipc03G0010130 AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc03G0010140 AT4G29670.1 atypical CYS HIS rich thioredoxin 2 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. atypical CYS HIS rich thioredoxin 2;(source:Araport11) Ipc03G0010150 AT4G29680.1 Alkaline-phosphatase-like family protein 0 Alkaline-phosphatase-like family protein;(source:Araport11) Ipc03G0010160 AT2G19560.1 proteasome family protein encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response. proteasome family protein;(source:Araport11) Ipc03G0010170 AT2G19540.1 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0010180 AT4G26150.1 cytokinin-responsive gata factor 1 Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression. cytokinin-responsive gata factor 1;(source:Araport11) Ipc03G0010190 AT4G26140.1 beta-galactosidase 12 putative beta-galactosidase beta-galactosidase 12;(source:Araport11) Ipc03G0010200 AT4G26140.1 beta-galactosidase 12 putative beta-galactosidase beta-galactosidase 12;(source:Araport11) Ipc03G0010210 AT4G29720.1 polyamine oxidase 5 0 polyamine oxidase 5;(source:Araport11) Ipc03G0010220 AT2G19520.1 Transducin family protein / WD-40 repeat family protein Controls flowering. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0010230 AT5G56900.2 CwfJ-like family protein / zinc finger (CCCH-type) family protein 0 CwfJ-like family protein / zinc finger (CCCH-type) family protein;(source:Araport11) Ipc03G0010240 AT5G11900.1 Translation initiation factor SUI1 family protein 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc03G0010250 AT5G56970.1 cytokinin oxidase 3 It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3;(source:Araport11) Ipc03G0010260 AT3G47560.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0010270 AT5G56960.2 0 0 basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc03G0010280 AT2G19490.1 recA DNA recombination family protein 0 recA DNA recombination family protein;(source:Araport11) Ipc03G0010290 AT5G56950.1 nucleosome assembly protein 1;3 Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc03G0010300 AT2G26150.4 0 member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2;(source:Araport11) Ipc03G0010310 AT5G57000.1 0 0 DEAD-box ATP-dependent RNA helicase;(source:Araport11) Ipc03G0010320 AT4G33050.3 calmodulin-binding family protein Encodes a calmodulin-binding protein involved in stomatal movement. calmodulin-binding family protein;(source:Araport11) Ipc03G0010330 AT3G13898.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc03G0010340 AT4G26100.1 casein kinase 1 Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization (member of CKL-B group). casein kinase 1;(source:Araport11) Ipc03G0010350 AT3G13920.3 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1;(source:Araport11) Ipc03G0010360 AT3G30290.1 cytochrome P450, family 702, subfamily A, polypeptide 8 a member of cytochrome P450 gene family cytochrome P450, family 702, subfamily A, polypeptide 8;(source:Araport11) Ipc03G0010370 AT5G57020.1 myristoyl-CoA:protein N-myristoyltransferase Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase. myristoyl-CoA:protein N-myristoyltransferase;(source:Araport11) Ipc03G0010380 AT5G57040.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Responds to NaCl,drought and high light stress. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc03G0010390 AT5G12010.1 0 0 nuclease;(source:Araport11) Ipc03G0010400 AT4G33080.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc03G0010410 AT4G29790.1 0 0 serine/arginine repetitive matrix protein;(source:Araport11) Ipc03G0010420 AT1G17550.2 0 Protein Phosphatase 2C homology to ABI2;(source:Araport11) Ipc03G0010430 AT4G29810.1 MAP kinase kinase 2 encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2;(source:Araport11) Ipc03G0010440 AT4G29820.1 homolog of CFIM-25 Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit. homolog of CFIM-25;(source:Araport11) Ipc03G0010450 AT1G72790.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0010460 AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein threonine synthase Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc03G0010470 AT5G20490.2 Myosin family protein with Dil domain Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. Required for fast root hair growth. This gene appears to be expressed at low levels throughout the plant. myosin family protein with Dil;(source:Araport11) Ipc03G0010480 AT5G35460.2 0 0 membrane protein;(source:Araport11) Ipc03G0010490 AT5G20610.1 0 Encodes a member of a plant specific C2 domain containing gene family. Along with PMI, it appears to be involved in chloroplast and nuclear relocation in response to light. EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc03G0010500 AT3G58290.3 TRAF-like superfamily protein 0 TRAF-like superfamily protein;(source:Araport11) Ipc03G0010510 AT5G20510.1 alfin-like 5 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 5;(source:Araport11) Ipc03G0010520 AT5G20520.1 alpha/beta-Hydrolases superfamily protein Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch). alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0010530 AT1G72830.1 nuclear factor Y, subunit A3 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Expression is upregulated in the shoot of cax1/cax3 mutant. nuclear factor Y, subunit A3;(source:Araport11) Ipc03G0010540 AT5G13640.1 phospholipid:diacylglycerol acyltransferase arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT) phospholipid:diacylglycerol acyltransferase;(source:Araport11) Ipc03G0010550 AT5G20540.1 BREVIS RADIX-like 4 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BREVIS RADIX-like 4;(source:Araport11) Ipc03G0010560 AT2G06040.1 0 Contributes to UV tolerance through nucleotide excision repair. F-box/LRR protein;(source:Araport11) Ipc03G0010570 AT3G13960.1 growth-regulating factor 5 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5;(source:Araport11) Ipc03G0010580 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc03G0010590 AT4G22930.2 0 Encodes dihydroorotase (PYR4). pyrimidin 4;(source:Araport11) Ipc03G0010600 AT2G31670.1 Stress responsive alpha-beta barrel domain protein 0 Stress responsive alpha-beta barrel domain protein;(source:Araport11) Ipc03G0010610 AT2G06255.1 ELF4-like 3 DUF1313 domain containing protein. ELF4-like 3;(source:Araport11) Ipc03G0010620 AT5G35530.1 Ribosomal protein S3 family protein 0 Ribosomal protein S3 family protein;(source:Araport11) Ipc03G0010630 AT2G06530.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc03G0010640 AT3G13980.1 0 0 SKI/DACH domain protein;(source:Araport11) Ipc03G0010650 AT5G12040.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein 0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein;(source:Araport11) Ipc03G0010660 AT3G42725.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc03G0010670 AT2G06010.1 OBP3-responsive gene 4 encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3. OBP3-responsive protein 4 (ORG4);(source:Araport11) Ipc03G0010680 AT2G06010.1 OBP3-responsive gene 4 encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3. OBP3-responsive protein 4 (ORG4);(source:Araport11) Ipc03G0010690 AT5G21940.1 0 0 hybrid signal transduction histidine kinase M-like protein;(source:Araport11) Ipc03G0010700 AT1G77550.1 tubulin-tyrosine ligases;tubulin-tyrosine ligases 0 tubulin-tyrosine ligase;(source:Araport11) Ipc03G0010710 AT5G60360.1 aleurain-like protease Encodes a senescence-associated thiol protease. The mRNA is cell-to-cell mobile. aleurain-like protease;(source:Araport11) Ipc03G0010720 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc03G0010730 AT5G20570.1 RING-box 1 Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. RING-box 1;(source:Araport11) Ipc03G0010740 AT2G05920.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc03G0010750 AT1G54115.1 cation calcium exchanger 4 Involved in cation (Na and K) homeostasis. cation calcium exchanger 4;(source:Araport11) Ipc03G0010760 AT2G05840.1 20S proteasome subunit PAA2 Encodes 20S proteasome subunit PAA2 (PAA2). 20S proteasome subunit PAA2;(source:Araport11) Ipc03G0010770 AT3G10540.1 3-phosphoinositide-dependent protein kinase 0 3-phosphoinositide-dependent protein kinase;(source:Araport11) Ipc03G0010780 AT3G52210.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0010790 AT2G11890.1 adenylate cyclases Encodes a tripolyphosphatase that is involved in root development. adenylate cyclase;(source:Araport11) Ipc03G0010800 AT3G55480.1 protein affected trafficking 2 Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles. protein affected traf%26#64257;(source:Araport11) Ipc03G0010810 AT3G52990.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc03G0010820 AT5G04550.2 0 0 type-1 restriction enzyme mjaxp r protein (DUF668);(source:Araport11) Ipc03G0010830 AT2G28600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0010840 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc03G0010860 AT5G04560.3 0 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. HhH-GPD base excision DNA repair family protein;(source:Araport11) Ipc03G0010850 AT5G29624.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc03G0010870 AT3G16990.1 Haem oxygenase-like, multi-helical 0 heme oxygenase-like, multi-helical;(source:Araport11) Ipc03G0010880 AT5G04660.1 cytochrome P450, family 77, subfamily A, polypeptide 4 encodes a protein with cytochrome P450 domain cytochrome P450, family 77, subfamily A, polypeptide 4;(source:Araport11) Ipc03G0010890 AT2G35000.1 RING/U-box superfamily protein ATL9 is an E3 ligase-like protein that is induced by chitin oligomers and contributes to fungal resistance.It differs from other members of the ATL family in that it has a PEST domain. It is a short lived protein that is subject to proteosome mediated degradation. It is expressed in many aerial tissues in a pattern that varies with developmental stage. RING/U-box superfamily protein;(source:Araport11) Ipc03G0010900 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0010910 AT5G22510.2 0 Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. alkaline/neutral invertase;(source:Araport11) Ipc03G0010920 AT5G17820.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc03G0010930 AT4G37930.1 serine transhydroxymethyltransferase 1 Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants. serine transhydroxymethyltransferase 1;(source:Araport11) Ipc03G0010940 AT4G02030.1 Vps51/Vps67 family (components of vesicular transport) protein 0 Vps51/Vps67 family (components of vesicular transport) protein;(source:Araport11) Ipc03G0010950 AT5G60990.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc03G0010960 AT1G66240.1 homolog of anti-oxidant 1 0 homolog of anti-oxidant 1;(source:Araport11) Ipc03G0010970 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc03G0010980 AT3G20970.1 NFU domain protein 4 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion. NFU domain protein 4;(source:Araport11) Ipc03G0010990 AT2G36320.1 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc03G0011000 AT1G05060.1 0 0 coiled-coil protein;(source:Araport11) Ipc03G0011010 AT3G10770.1 Single-stranded nucleic acid binding R3H protein 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc03G0011020 AT5G04710.1 Zn-dependent exopeptidases superfamily protein Plastid localized metalloaminopeptidase. Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc03G0011030 AT2G36300.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc03G0011040 AT2G36290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0011050 AT3G54250.1 GHMP kinase family protein Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. GHMP kinase family protein;(source:Araport11) Ipc03G0011060 AT3G54260.1 TRICHOME BIREFRINGENCE-LIKE 36 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 36;(source:Araport11) Ipc03G0011070 AT3G10080.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc03G0011080 AT5G04740.1 ACT domain-containing protein Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. ACT domain-containing protein;(source:Araport11) Ipc03G0011090 AT5G56610.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT1 in root. For PTPMT2.1, lower expression levels were detected in leaf and stem as compared to the other tissues. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc03G0011100 AT2G16710.1 Iron-sulphur cluster biosynthesis family protein 0 Iron-sulfur cluster biosynthesis family protein;(source:Araport11) Ipc03G0011110 AT2G27510.1 ferredoxin 3 0 ferredoxin 3;(source:Araport11) Ipc03G0011120 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0011130 AT5G24280.3 0 Encodes GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein. Involved in somatic homologous recombination. gamma-irradiation and mitomycin c induced 1;(source:Araport11) Ipc03G0011140 AT3G54290.1 0 0 hemerythrin HHE cation-binding domain protein;(source:Araport11) Ipc03G0011150 AT2G23930.1 probable small nuclear ribonucleoprotein G 0 Putative small nuclear ribonucleoprotein G;(source:Araport11) Ipc03G0011160 AT2G38710.4 0 0 AMMECR1 family;(source:Araport11) Ipc03G0011170 AT3G52220.1 0 0 leukocyte immunoglobulin-like receptor family A protein;(source:Araport11) Ipc03G0011180 AT5G04750.1 F1F0-ATPase inhibitor protein, putative 0 F1F0-ATPase inhibitor protein;(source:Araport11) Ipc03G0011190 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc03G0011200 AT3G26618.1 eukaryotic release factor 1-3 0 eukaryotic release factor 1-3;(source:Araport11) Ipc03G0011210 AT3G44190.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc03G0011220 AT3G10640.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc03G0011230 AT5G04840.1 bZIP protein 0 bZIP protein;(source:Araport11) Ipc03G0011240 AT4G18230.3 0 0 UDP-N-acetylglucosamine transferase subunit ALG14-like protein;(source:Araport11) Ipc03G0011250 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc03G0011260 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc03G0011270 AT2G39518.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc03G0011280 AT5G01420.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc03G0011290 AT2G45260.1 Plant protein of unknown function (DUF641) 0 myosin-4 protein (DUF641);(source:Araport11) Ipc03G0011300 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc03G0011310 AT3G56070.2 rotamase cyclophilin 2 rotamase cyclophilin 2 (ROC2) exhibiting peptidyl-prolyl cis-trans isomerase activity involved in signal transduction. rotamase cyclophilin 2;(source:Araport11) Ipc03G0011320 AT3G04560.1 0 0 nucleolar/coiled-body phosphoprotein;(source:Araport11) Ipc03G0011330 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc03G0011340 AT3G04580.2 Signal transduction histidine kinase, hybrid-type, ethylene sensor Ethylene receptor, subfamily 2. Has serine kinase activity. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc03G0011350 AT3G04590.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc03G0011360 AT4G12750.1 Homeodomain-like transcriptional regulator 0 Homeodomain-like transcriptional regulator;(source:Araport11) Ipc03G0011370 AT5G58090.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc03G0011380 AT1G08730.2 0 Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc03G0011390 AT3G56710.2 0 Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts. sigma factor binding protein 1;(source:Araport11) Ipc03G0011400 AT5G28640.1 SSXT family protein Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. SSXT family protein;(source:Araport11) Ipc03G0011410 AT2G31335.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0011420 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc03G0011430 AT5G55490.9 0 Encodes a transmembrane domain containing protein that is expressed in pollen germ cells. gamete expressed protein 1;(source:Araport11) Ipc03G0011440 AT3G11910.3 0 0 ubiquitin-specific protease 13;(source:Araport11) Ipc03G0011450 AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor 0 FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11) Ipc03G0011460 AT5G04870.1 calcium dependent protein kinase 1 A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. calcium dependent protein kinase 1;(source:Araport11) Ipc03G0011470 AT3G10650.2 0 Encodes a nucleoporin involved in mRNA export from the nucleus. It is also involved in the regulation of nuclear morphology. nuclear pore complex protein;(source:Araport11) Ipc03G0011480 AT3G04530.1 phosphoenolpyruvate carboxylase kinase 2 Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light and is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphoenolpyruvate carboxylase kinase 2;(source:Araport11) Ipc03G0011490 AT5G18480.1 plant glycogenin-like starch initiation protein 6 Encodes an IPC (inositol phosphorylceramide) glucuronosyltransferase. Defects in transmission via the pollen are evident but the defect in transmission through the male gametophyte is not due to improper pollen development or inability of pollen tubes to germinate and grow. Using a pollen specific complementation strategy to obtain homozygotes, loss of function results in constitutive hypersensitive response and severe growth defects. plant glycogenin-like starch initiation protein 6;(source:Araport11) Ipc03G0011500 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc03G0011510 AT1G08640.1 Chloroplast J-like domain 1 Encodes a choloroplast membrane protein CJD1 (Chloroplast J-like Domain 1). Predicted to contain a transit peptide, three transmembrane domains and an N-terminal J-like domain. Influences fatty acid composition of chloroplast lipids. Chloroplast J-like domain 1;(source:Araport11) Ipc03G0011520 AT1G08630.6 0 Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings. threonine aldolase 1;(source:Araport11) Ipc03G0011530 AT5G28490.1 Protein of unknown function (DUF640) Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner. LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc03G0011540 AT1G08620.4 0 0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc03G0011550 AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation. chloroplastic NIFS-like cysteine desulfurase;(source:Araport11) Ipc03G0011560 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011570 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011600 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011580 AT3G04760.2 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011590 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011610 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011620 AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0011630 AT5G28850.2 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0011640 AT5G28900.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0011650 AT5G52390.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc03G0011670 AT5G16630.2 DNA repair protein Rad4 family 0 DNA repair protein Rad4 family;(source:Araport11) Ipc03G0011660 AT3G28700.3 0 0 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185);(source:Araport11) Ipc03G0011680 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc03G0011690 AT5G08110.3 0 Plays a role in the maintenance of genome stability and the repair of aberrant replication intermediates in the root meristem. Is involved with RAD1, FAN1, and RECQ4A in the repair of DNA CLs. UBQ, helicase-c and DEAD-like helicase domain-containing protein;(source:Araport11) Ipc03G0011700 AT3G04470.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc03G0011710 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0011720 AT5G28910.2 0 0 alpha-(1,6)-fucosyltransferase;(source:Araport11) Ipc03G0011730 AT1G04030.2 0 0 eisosome protein;(source:Araport11) Ipc03G0011740 AT5G54010.1 UDP-Glycosyltransferase superfamily protein Encodes a flavonoid 3-O-glucoside:2″-O-glucosyltransferase that determines pollen-specific flavonol structure. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0011750 AT3G55060.2 0 0 CAP-gly domain linker;(source:Araport11) Ipc03G0011760 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0011770 AT2G39340.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family Putative mRNA export factor that is highly co-expressed with PRP4KA. SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11) Ipc03G0011780 AT3G12345.1 0 0 FKBP-type peptidyl-prolyl cis-trans isomerase;(source:Araport11) Ipc03G0011790 AT3G55090.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc03G0011800 AT1G28060.3 0 0 Pre-mRNA-splicing factor 3;(source:Araport11) Ipc03G0011810 AT3G46290.1 hercules receptor kinase 1 Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 1;(source:Araport11) Ipc03G0011820 AT2G46080.1 0 Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal. BPS1-like protein;(source:Araport11) Ipc03G0011830 AT5G13560.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc03G0011840 AT2G39370.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc03G0011850 AT3G12360.1 Ankyrin repeat family protein Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein;(source:Araport11) Ipc03G0011860 AT5G04530.1 3-ketoacyl-CoA synthase 19 Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 19;(source:Araport11) Ipc03G0011870 AT2G28630.2 0 Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 12;(source:Araport11) Ipc03G0011880 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc03G0011890 AT2G39420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0011900 AT2G33680.8 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0011910 AT3G55220.1 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein Encodes a spliceosomal protein that is required for proper reproduction. RNAi lines display low pollen viability,caused by a defect in the transition from microspore to bicellular stage during pollen development. Cleavage and polyadenylation specificity factor (CPSF) A subunit protein;(source:Araport11) Ipc03G0011920 AT1G75270.1 dehydroascorbate reductase 2 0 dehydroascorbate reductase 2;(source:Araport11) Ipc03G0011930 AT3G55270.1 mitogen-activated protein kinase phosphatase 1 Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation. mitogen-activated protein kinase phosphatase 1;(source:Araport11) Ipc03G0011940 AT3G55280.2 ribosomal protein L23AB 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA. ribosomal protein L23AB;(source:Araport11) Ipc03G0011950 AT3G55320.1 P-glycoprotein 20 0 P-glycoprotein 20;(source:Araport11) Ipc03G0011960 AT5G54380.1 protein kinase family protein Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. protein kinase family protein;(source:Araport11) Ipc03G0011970 AT4G01470.1 tonoplast intrinsic protein 1;3 Encodes AtTIP1;3, functions as water and urea channels in pollen. tonoplast intrinsic protein 1;(source:Araport11) Ipc03G0011980 AT1G64940.1 cytochrome P450, family 87, subfamily A, polypeptide 6 member of CYP89A cytochrome P450, family 87, subfamily A, polypeptide 6;(source:Araport11) Ipc03G0011990 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0012000 AT1G64940.1 cytochrome P450, family 87, subfamily A, polypeptide 6 member of CYP89A cytochrome P450, family 87, subfamily A, polypeptide 6;(source:Araport11) Ipc03G0012010 AT2G28710.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc03G0012020 AT5G13660.1 0 0 N-lysine methyltransferase;(source:Araport11) Ipc03G0012030 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0012040 AT3G55410.2 0 0 2-oxoglutarate dehydrogenase, E1 component;(source:Araport11) Ipc03G0012050 AT5G54130.4 Calcium-binding endonuclease/exonuclease/phosphatase family 0 Calcium-binding endonuclease/exonuclease/phosphatase family;(source:Araport11) Ipc03G0012060 AT3G46060.3 RAB GTPase homolog 8A small GTP-binding protein (ara-3) The mRNA is cell-to-cell mobile. RAB GTPase homolog 8A;(source:Araport11) Ipc03G0012070 AT2G31730.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0012080 AT5G59890.1 actin depolymerizing factor 4 actin depolymerizing factor 4 (ADF4) mRNA, complete cds actin depolymerizing factor 4;(source:Araport11) Ipc03G0012090 AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0012100 AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0012110 AT5G55390.3 0 Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. ENHANCED DOWNY MILDEW 2;(source:Araport11) Ipc03G0012120 AT1G23290.1 Ribosomal protein L18e/L15 superfamily protein Encodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20. The mRNA is cell-to-cell mobile. Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc03G0012130 AT3G12590.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0012140 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0012150 AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0012170 AT3G10500.1 NAC domain containing protein 53 Encodes a transcriptional activator that is associated with the plasma membrane in a dormant form and is proteolytically cleaved to create a form that can enter the nucleus. It is thought to promote ROS production by binding directly to the promoters of genes encoding ROS biosynthetic enzymes during drought-induced leaf senescence. The mRNA is cell-to-cell mobile. NAC domain containing protein 53;(source:Araport11) Ipc03G0012160 #N/A #N/A #N/A #N/A Ipc03G0012180 AT2G39570.1 ACT domain-containing protein Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. ACT domain-containing protein;(source:Araport11) Ipc03G0012190 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0012200 AT5G17700.2 0 0 MATE efflux family protein;(source:Araport11) Ipc03G0012210 AT5G46500.4 0 0 protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein;(source:Araport11) Ipc03G0012220 AT3G55400.1 methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) 0 methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS);(source:Araport11) Ipc03G0012230 AT2G28760.4 0 0 UDP-XYL synthase 6;(source:Araport11) Ipc03G0012240 AT3G46450.3 0 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc03G0012250 #N/A #N/A #N/A #N/A Ipc03G0012260 AT3G55390.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc03G0012270 AT5G59300.1 ubiquitin carrier protein 7 ubiquitin conjugating enzyme E2 ubiquitin-conjugating enzyme E2;(source:Araport11) Ipc03G0012280 AT1G56210.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0012290 AT3G06130.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0012300 AT3G55360.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport as well as reduced trichome papillae. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) Ipc03G0012310 AT3G12110.1 actin-11 Encodes an actin that is expressed predominantly during reproductive development. actin-11;(source:Araport11) Ipc03G0012320 AT3G55420.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0012330 AT2G39650.1 Protein of unknown function (DUF506) 0 cruciferin (DUF506);(source:Araport11) Ipc03G0012340 AT3G55440.1 triosephosphate isomerase Encodes triosephosphate isomerase. triosephosphate isomerase;(source:Araport11) Ipc03G0012350 AT1G07570.5 0 Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues Protein kinase superfamily protein;(source:Araport11) Ipc03G0012360 AT2G39670.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc03G0012370 AT3G55460.1 SC35-like splicing factor 30 encodes an SC35-like splicing factor that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. The mRNA is cell-to-cell mobile. SC35-like splicing factor 30;(source:Araport11) Ipc03G0012380 AT3G55470.2 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0012400 AT3G55480.2 protein affected trafficking 2 Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles. protein affected traf%26#64257;(source:Araport11) Ipc03G0012390 AT2G39690.1 Protein of unknown function, DUF547 0 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547);(source:Araport11) Ipc03G0012410 AT3G48670.3 0 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. XH/XS domain-containing protein;(source:Araport11) Ipc03G0012420 AT2G39700.1 expansin A4 putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A4;(source:Araport11) Ipc03G0012430 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc03G0012440 AT2G39705.1 ROTUNDIFOLIA like 8 0 ROTUNDIFOLIA like 8;(source:Araport11) Ipc03G0012450 AT3G55530.1 RING/U-box superfamily protein Encodes an intracellular membrane localized protein with E3 ligase activity, found in the ER with the C-terminus facing the cytoplasm. It is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA. RING/U-box superfamily protein;(source:Araport11) Ipc03G0012460 AT1G51805.2 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0012470 AT2G39710.1 Eukaryotic aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0012480 AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc03G0012490 AT3G11430.1 glycerol-3-phosphate acyltransferase 5 sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester. glycerol-3-phosphate acyltransferase 5;(source:Araport11) Ipc03G0012500 AT3G21420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein LATERAL BRANCHING OXIDOREDUCTASE (LBO), encodes an oxidoreductase-like enzyme of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily. It is involved in the biosynthesis of strigolactones. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0012510 AT5G02140.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc03G0012520 AT5G06080.1 LOB domain-containing protein 33 0 LOB domain-containing protein 33;(source:Araport11) Ipc03G0012530 AT1G74260.1 purine biosynthesis 4 Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development. purine biosynthesis 4;(source:Araport11) Ipc03G0012540 AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0012550 AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0012560 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc03G0012570 AT2G44920.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentapeptide-repeat protein (PRP) composed of 25 repeats capped by N- and C-terminal a-helices. Unlike other PRPs, At2g44920 consists exclusively of type II b-turns Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0012580 AT2G37730.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc03G0012590 AT4G17810.2 0 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc03G0012600 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0012610 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0012620 AT1G07430.1 highly ABA-induced PP2C gene 2 Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy. highly ABA-induced PP2C protein 2;(source:Araport11) Ipc03G0012630 AT2G39750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0012640 AT3G55570.1 0 0 cytoplasmic tRNA 2-thiolation protein;(source:Araport11) Ipc03G0012650 AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein TCF1 encodes a member of the RCC1 gene family and is required for chromatin based gene regulation of cold responsive genes in a CBF-independent manner. It is expressed in response to cold but not ABA. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc03G0012660 AT5G02070.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc03G0012670 AT3G53850.2 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc03G0012680 AT3G55605.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc03G0012690 AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2 encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner. Mutants are defective in pollen development. delta 1-pyrroline-5-carboxylate synthase 2;(source:Araport11) Ipc03G0012700 AT4G38040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc03G0012710 AT2G37900.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0012720 AT5G05970.1 Transducin/WD40 repeat-like superfamily protein a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0012730 AT2G39830.1 DA1-related protein 2 Essential for early phloem development and function, and for root system development.DAR2 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. DA1-related protein 2;(source:Araport11) Ipc03G0012740 AT1G07410.1 RAB GTPase homolog A2B 0 RAB GTPase homolog A2B;(source:Araport11) Ipc03G0012750 AT5G02020.1 0 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). E3 ubiquitin-protein ligase RLIM-like protein;(source:Araport11) Ipc03G0012760 AT5G05950.1 maternal effect embryo arrest 60 0 maternal effect embryo arrest 60;(source:Araport11) Ipc03G0012780 AT5G05930.1 guanylyl cyclase 1 0 guanylyl cyclase 1;(source:Araport11) Ipc03G0012770 AT1G58060.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc03G0012790 AT2G39870.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0012800 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc03G0012810 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc03G0012820 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc03G0012830 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc03G0012840 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc03G0012850 AT1G71820.1 SEC6 Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. SEC6;(source:Araport11) Ipc03G0012860 AT5G05840.1 Protein of unknown function (DUF620) 0 replication factor C subunit, putative (DUF620);(source:Araport11) Ipc03G0012870 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0012880 AT3G55740.1 proline transporter 2 Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots. proline transporter 2;(source:Araport11) Ipc03G0012890 AT3G11320.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc03G0012900 AT3G55770.5 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc03G0012910 AT2G39920.2 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc03G0012920 AT3G55800.1 sedoheptulose-bisphosphatase Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. The mRNA is cell-to-cell mobile. sedoheptulose-bisphosphatase;(source:Araport11) Ipc03G0012930 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc03G0012940 AT2G38090.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc03G0012950 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc03G0012960 AT2G39950.1 0 0 flocculation protein;(source:Araport11) Ipc03G0012970 AT2G39960.1 Microsomal signal peptidase 25 kDa subunit (SPC25) 0 Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11) Ipc03G0012980 AT1G30530.1 UDP-glucosyl transferase 78D1 The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin UDP-glucosyl transferase 78D1;(source:Araport11) Ipc03G0012990 AT2G39782.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0013000 AT1G07310.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0013010 AT3G31950.1 0 0 nucleic acid-binding/zinc ion-binding protein;(source:Araport11) Ipc03G0013020 AT2G39980.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc03G0013030 AT3G11260.1 WUSCHEL related homeobox 5 WOX5 is a member of the Wuschel (WUS) family of homeodomain transcription factors and is required for quiescent center (QC) function and columella stem cell maintenance in the root meristem. It is expressed in the QC and moves to the columella stem cells where it represses their differentiation. WOX5 binds members of the Topless family of transcriptional co-repressors. WUSCHEL related homeobox 5;(source:Araport11) Ipc03G0013040 AT4G00430.1 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1;(source:Araport11) Ipc03G0013050 AT3G55830.1 Nucleotide-diphospho-sugar transferases superfamily protein A member of the Glycosyltransferase Family 64, homologous to Poplar cambium-expressed GT64 gene. The EPC1 protein plays a critical role during plant development in maintaining the integrity of organs via cell-cell adhesion, thereby providing mechanical strength and facilitating the movement of metabolites throughout the plant.Loss of function specifically affects glycosylinositolphosphorylceramide (GIPC) mannosylation. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc03G0013060 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0013070 AT2G40000.1 ortholog of sugar beet HS1 PRO-1 2 0 ortholog of sugar beet HS1 PRO-1 2;(source:Araport11) Ipc03G0013080 AT2G40010.1 Ribosomal protein L10 family protein 0 Ribosomal protein L10 family protein;(source:Araport11) Ipc03G0013090 AT2G38120.1 Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0013100 #N/A #N/A #N/A #N/A Ipc03G0013110 AT2G40020.2 Nucleolar histone methyltransferase-related protein 0 Nucleolar histone methyltransferase-related protein;(source:Araport11) Ipc03G0013120 AT5G05730.1 anthranilate synthase alpha subunit 1 ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. anthranilate synthase alpha subunit 1;(source:Araport11) Ipc03G0013130 AT5G05710.1 Pleckstrin homology (PH) domain superfamily protein 0 Pleckstrin homology (PH) domain superfamily protein;(source:Araport11) Ipc03G0013140 AT2G40070.1 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc03G0013150 AT3G11240.1 arginine-tRNA protein transferase 2 Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. ATE2 has also been show to be involved in the response to pathogens. arginine-tRNA protein transferase 2;(source:Araport11) Ipc03G0013160 AT2G40110.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc03G0013170 AT5G05690.1 Cytochrome P450 superfamily protein Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0013180 AT2G40095.2 0 0 Alpha/beta hydrolase related protein;(source:Araport11) Ipc03G0013200 AT3G55920.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc03G0013190 AT2G40080.1 Protein of unknown function (DUF1313) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes. EARLY FLOWERING-like protein (DUF1313);(source:Araport11) Ipc03G0013210 AT3G08510.2 phospholipase C 2 Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol. It is involved in auxin biosynthesis and signaling, modulating development of both male and female gametophytes. It also regulates MAMP-triggered immunity by modulating ROS production. phospholipase C 2;(source:Araport11) Ipc03G0013220 AT3G55950.1 CRINKLY4 related 3 0 CRINKLY4 related 3;(source:Araport11) Ipc03G0013230 AT3G55960.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0013240 AT2G29970.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. The mRNA is cell-to-cell mobile. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0013250 AT5G05610.2 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 1;(source:Araport11) Ipc03G0013260 AT1G76500.1 Predicted AT-hook DNA-binding family protein Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc03G0013270 AT5G05600.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a protein with similarity to flavonol synthases that is involved in the detoxifcation polycyclic aromatic hydrocarbons.One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0013280 AT1G09730.2 Cysteine proteinases superfamily protein Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Cysteine proteinases superfamily protein;(source:Araport11) Ipc03G0013290 AT2G40140.2 zinc finger (CCCH-type) family protein 0 zinc finger (CCCH-type) family protein;(source:Araport11) Ipc03G0013300 AT5G05580.1 fatty acid desaturase 8 Encodes a temperature sensitive plastidic fatty acid desaturase. fatty acid desaturase 8;(source:Araport11) Ipc03G0013310 AT3G55990.1 Plant protein of unknown function (DUF828) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). The mRNA is cell-to-cell mobile. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc03G0013320 AT2G40180.1 phosphatase 2C5 Encodes PP2C5, a member of the PP2C family phosphatases. PP2C5 acts as a MAPK phosphatase that positively regulates seed germination, stomatal closure and ABA-inducible gene expression. phosphatase 2C5;(source:Araport11) Ipc03G0013330 AT3G08530.1 Clathrin, heavy chain CHC2 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis Mutants have increased drought tolerance due to defects in stomatal movement. Clathrin, heavy chain;(source:Araport11) Ipc03G0013340 AT3G56010.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0013350 AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0013360 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc03G0013370 AT2G40230.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc03G0013380 AT3G46510.1 plant U-box 13 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13;(source:Araport11) Ipc03G0013390 AT3G56040.1 UDP-glucose pyrophosphorylase 3 0 UDP-glucose pyrophosphorylase 3;(source:Araport11) Ipc03G0013400 AT2G40250.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc03G0013410 AT2G40260.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0013420 AT5G05520.1 Outer membrane OMP85 family protein 0 Outer membrane OMP85 family protein;(source:Araport11) Ipc03G0013430 AT2G40270.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc03G0013440 AT2G40280.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0013450 AT4G19180.3 0 Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence. GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11) Ipc03G0013460 AT2G30130.1 Lateral organ boundaries (LOB) domain family protein Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc03G0013470 AT5G05460.1 Glycosyl hydrolase family 85 Encodes a cytosolic beta-endo-N-acetyglucosaminidase (ENGase). ENGases N-glycans cleave the O-glycosidic linkage between the two GlcNAc residues of the N-glycan core structure and thus generate a protein with a single GlcNAc attached to asparagine. Glycosyl hydrolase family 85;(source:Araport11) Ipc03G0013480 AT2G40316.1 0 0 autophagy-like protein;(source:Araport11) Ipc03G0013490 AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Chemical evidence for function comes from xylan NMR analysis. Secondary wall thickening phenotype can be only observed in double or triple mutant with esk1. TRICHOME BIREFRINGENCE-LIKE 33;(source:Araport11) Ipc03G0013500 AT2G40330.1 PYR1-like 6 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYR1-like 6;(source:Araport11) Ipc03G0013510 AT5G20420.1 chromatin remodeling 42 Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs. chromatin remodeling 42;(source:Araport11) Ipc03G0013520 AT2G40370.1 laccase 5 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 5;(source:Araport11) Ipc03G0013530 AT3G51740.1 inflorescence meristem receptor-like kinase 2 encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. The mRNA is cell-to-cell mobile. inflorescence meristem receptor-like kinase 2;(source:Araport11) Ipc03G0013540 AT3G56140.3 0 0 DUF399 family protein, putative (DUF399 and DUF3411);(source:Araport11) Ipc03G0013550 AT3G56140.2 0 0 DUF399 family protein, putative (DUF399 and DUF3411);(source:Araport11) Ipc03G0013560 AT4G14270.2 0 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins. polyadenylate-binding protein interacting protein;(source:Araport11) Ipc03G0013570 AT2G40410.2 Staphylococcal nuclease homologue Encodes a Ca(2+)-dependent nuclease that can degrade both DNA and RNA. Ca(2+)-dependent nuclease family protein;(source:Araport11) Ipc03G0013590 #N/A #N/A #N/A #N/A Ipc03G0013580 AT3G10985.1 senescence associated gene 20 A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis. The mRNA is cell-to-cell mobile. senescence associated gene 20;(source:Araport11) Ipc03G0013600 AT5G05350.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc03G0013610 AT3G56190.1 alpha-soluble NSF attachment protein 2 Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis alpha-soluble NSF attachment protein 2;(source:Araport11) Ipc03G0013620 AT3G56200.1 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0013630 AT2G40435.1 0 0 transcription factor SCREAM-like protein;(source:Araport11) Ipc03G0013640 AT3G56230.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc03G0013650 AT5G66200.1 armadillo repeat only 2 Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. armadillo repeat only 2;(source:Araport11) Ipc03G0013660 AT2G40460.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0013670 AT2G40470.1 LOB domain-containing protein 15 LOB-domain containing protein. Involved in regulation of xylem differentiation- acts as a regulator of VND7 which is a master regulator of xylem cell differentiation. LOB domain-containing protein 15;(source:Araport11) Ipc03G0013680 AT5G01790.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0013690 AT2G40480.1 Plant protein of unknown function (DUF827) 0 WEB family protein (DUF827);(source:Araport11) Ipc03G0013700 AT3G10970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0013710 AT3G10960.1 AZA-guanine resistant1 Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2). AZA-guanine resistant1;(source:Araport11) Ipc03G0013720 AT3G10940.1 dual specificity protein phosphatase (DsPTP1) family protein Encodes a protein with a predicted dual-specificity phosphatase domain, similar to the glucan phosphorylases SEX4 and LSF1, however, it lacks the carbohydrate binding domain present in those proteins. Has phosphoglucan phosphatase activity. It binds to starch and specifically hydrolyzes phosphate from the C3-position. dual specificity protein phosphatase (DsPTP1) family protein;(source:Araport11) Ipc03G0013730 AT5G05310.7 0 0 TLC ATP/ADP transporter;(source:Araport11) Ipc03G0013740 AT2G40540.5 0 putative potassium transporter AtKT2p (AtKT2) mRNA, potassium transporter 2;(source:Araport11) Ipc03G0013750 AT4G01010.2 0 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 13;(source:Araport11) Ipc03G0013760 AT3G56330.1 N2,N2-dimethylguanosine tRNA methyltransferase 0 N2,N2-dimethylguanosine tRNA methyltransferase;(source:Araport11) Ipc03G0013770 AT1G06890.4 0 UXT3 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0013780 AT3G10915.2 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc03G0013790 AT2G40600.1 appr-1-p processing enzyme family protein 0 appr-1-p processing enzyme family protein;(source:Araport11) Ipc03G0013800 AT2G40610.1 expansin A8 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A8;(source:Araport11) Ipc03G0013810 AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc03G0013820 AT3G10910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0013830 AT3G56360.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0013840 AT5G05240.2 0 0 cation-transporting ATPase;(source:Araport11) Ipc03G0013850 AT5G05230.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0013860 AT3G56370.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0013870 AT3G56400.1 WRKY DNA-binding protein 70 Member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. WRKY DNA-binding protein 70;(source:Araport11) Ipc03G0013880 AT2G40760.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc03G0013890 AT5G05220.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0013900 AT2G40770.3 0 0 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein;(source:Araport11) Ipc03G0013910 AT5G05190.1 Protein of unknown function (DUF3133) 0 hypothetical protein (DUF3133);(source:Araport11) Ipc03G0013920 AT5G05180.2 0 0 myosin heavy chain, striated protein;(source:Araport11) Ipc03G0013930 AT3G10870.1 methyl esterase 17 Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem. methyl esterase 17;(source:Araport11) Ipc03G0013940 AT3G08720.4 0 Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. serine/threonine protein kinase 2;(source:Araport11) Ipc03G0013950 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0013960 AT3G10670.1 non-intrinsic ABC protein 7 Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe–S clusters. Expressed in embryos and meristems. non-intrinsic ABC protein 7;(source:Araport11) Ipc03G0013970 AT2G40800.1 0 0 import inner membrane translocase subunit;(source:Araport11) Ipc03G0013980 AT3G10850.1 Metallo-hydrolase/oxidoreductase superfamily protein glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc03G0013990 AT3G10850.1 Metallo-hydrolase/oxidoreductase superfamily protein glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc03G0014000 AT5G01960.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0014010 AT3G56460.1 GroES-like zinc-binding alcohol dehydrogenase family protein 0 GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc03G0014020 AT3G10840.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0014040 AT4G19985.6 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc03G0014030 AT2G40815.2 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0014050 AT1G79010.1 Alpha-helical ferredoxin 0 Alpha-helical ferredoxin;(source:Araport11) Ipc03G0014060 AT3G54190.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0014070 AT1G17360.1 0 0 LOW protein: protein phosphatase 1 regulatory subunit-like protein;(source:Araport11) Ipc03G0014080 AT1G33400.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0014090 AT5G05000.3 translocon at the outer envelope membrane of chloroplasts 34 Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 34;(source:Araport11) Ipc03G0014100 AT2G18030.1 Peptide methionine sulfoxide reductase family protein 0 Peptide methionine sulfoxide reductase family protein;(source:Araport11) Ipc03G0014110 AT3G49740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0014120 AT1G02170.1 metacaspase 1 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 1;(source:Araport11) Ipc03G0014130 AT5G07440.2 glutamate dehydrogenase 2 Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 2;(source:Araport11) Ipc03G0014140 AT5G51150.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc03G0014150 AT2G31180.1 myb domain protein 14 Member of the R2R3 factor gene family. myb domain protein 14;(source:Araport11) Ipc03G0014160 AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase) 0 RNA-directed DNA polymerase (reverse transcriptase);(source:Araport11) Ipc03G0014170 AT2G44740.1 cyclin p4;1 0 cyclin p4;(source:Araport11) Ipc03G0014180 AT5G07475.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc03G0014190 AT1G02130.1 RAS 5 Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5;(source:Araport11) Ipc03G0014200 AT5G61620.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc03G0014210 AT5G51230.1 VEFS-Box of polycomb protein Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. VEFS-Box of polycomb protein;(source:Araport11) Ipc03G0014220 AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0014230 AT3G45080.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0014240 AT5G61520.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0014250 AT5G61520.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0014260 AT5G23270.1 sugar transporter 11 Membrane localized sucrose transporter. sugar transporter 11;(source:Araport11) Ipc03G0014270 AT5G61540.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 0 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc03G0014280 AT4G25160.1 U-box domain-containing protein kinase family protein Encodes a U-box domain-containing E3 ubiquitin ligase with central Ser/Thr protein kinase domain whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. U-box domain-containing protein kinase family protein;(source:Araport11) Ipc03G0014290 AT5G07620.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0014300 AT4G25150.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc03G0014310 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc03G0014320 AT5G51220.1 ubiquinol-cytochrome C chaperone family protein 0 ubiquinol-cytochrome C chaperone family protein;(source:Araport11) Ipc03G0014330 AT5G07590.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0014340 AT5G07580.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive transcription factor;(source:Araport11) Ipc03G0014350 AT5G51190.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0014360 AT4G17500.1 ethylene responsive element binding factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene responsive element binding factor 1;(source:Araport11) Ipc03G0014370 AT5G51210.1 oleosin3 Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. oleosin3;(source:Araport11) Ipc03G0014380 AT5G04620.2 biotin F The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms. biotin F;(source:Araport11) Ipc03G0014390 AT5G61500.1 autophagy 3 (APG3) autophagy-related (ATG) gene autophagy 3 (APG3);(source:Araport11) Ipc03G0014400 AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein PLAT1 domain stress protein family member. Involved in mediating response to stresses such as pathogen infection. It is found in endoplasmic reticulum bodies. PLAT1 is induced by pathogenic fungi and induces the production of scopolin. Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11) Ipc03G0014410 AT4G25180.1 RNA polymerase III RPC4 0 RNA polymerase III RPC4;(source:Araport11) Ipc03G0014420 AT4G16720.1 Ribosomal protein L23/L15e family protein 0 Ribosomal protein L23/L15e family protein;(source:Araport11) Ipc03G0014430 AT5G61480.1 Leucine-rich repeat protein kinase family protein Encodes PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0014440 AT5G61450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0014450 AT3G47440.1 tonoplast intrinsic protein 5;1 Encodes AtTIP5;1, functions as water and urea channels in pollen. Target promoter of the male germline-specific transcription factor DUO1. tonoplast intrinsic protein 5;(source:Araport11) Ipc03G0014460 AT5G62410.1 structural maintenance of chromosomes 2 SMC2-1 (SMC2) structural maintenance of chromosomes 2;(source:Araport11) Ipc03G0014470 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc03G0014480 AT2G45010.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc03G0014490 AT3G47430.1 peroxin 11B member of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation. The mRNA is cell-to-cell mobile. peroxin 11B;(source:Araport11) Ipc03G0014500 AT1G74875.1 0 0 F-box protein;(source:Araport11) Ipc03G0014510 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc03G0014520 AT3G47420.3 0 Encodes a Pi starvation-responsive protein AtPS3. A member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. putative glycerol-3-phosphate transporter 1;(source:Araport11) Ipc03G0014530 AT4G25225.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0014540 AT5G64770.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc03G0014550 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0014560 AT5G64770.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc03G0014570 AT4G12500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0014580 AT5G11310.1 Pentatricopeptide repeat (PPR) superfamily protein The SOAR1 gene encodes a pentatricopeptide repeat (PPR) protein which localizes to both the cytosol and nucleus. Down-regulation of SOAR1 strongly enhances, but up-regulation of SOAR1 almost completely impairs, ABA responses, revealing that SOAR1 is a critical, negative, regulator of ABA signalling. Further genetic evidence supports that SOAR1 functions downstream of ABAR and probably upstream of an ABA-responsive transcription factor ABI5. Changes in the SOAR1 expression alter expression of a subset of ABA-responsive genes including ABI5. These findings provide important information to elucidate further the functional mechanism of PPR proteins and the complicated ABA signalling network. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0014590 AT5G62390.1 BCL-2-associated athanogene 7 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance. BCL-2-associated athanogene 7;(source:Araport11) Ipc03G0014600 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc03G0014610 AT5G51460.4 0 homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0014620 AT1G62660.1 Glycosyl hydrolases family 32 protein 0 Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc03G0014630 AT4G12420.2 Cupredoxin superfamily protein Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. Cupredoxin superfamily protein;(source:Araport11) Ipc03G0014640 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc03G0014650 AT3G47400.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc03G0014660 AT1G23210.1 glycosyl hydrolase 9B6 0 glycosyl hydrolase 9B6;(source:Araport11) Ipc03G0014670 AT1G70710.1 glycosyl hydrolase 9B1 endo-1,4-beta-glucanase. Involved in cell elongation. glycosyl hydrolase 9B1;(source:Araport11) Ipc03G0014680 AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor expressed throughout the plant. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc03G0014690 AT4G25250.1 Plant invertase/pectin methylesterase inhibitor superfamily protein PMEI4 pectin methyleseterase inhibitor. Expressed in roots. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc03G0014700 AT5G62350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc03G0014710 AT4G12350.1 myb domain protein 42 Encodes a putative transcription factor (MYB42). myb domain protein 42;(source:Araport11) Ipc03G0014720 AT5G62310.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc03G0014730 AT4G25290.1 DNA photolyases;DNA photolyases 0 DNA photolyase;(source:Araport11) Ipc03G0014740 AT5G51550.1 EXORDIUM like 3 0 EXORDIUM like 3;(source:Araport11) Ipc03G0014750 AT3G47370.3 Ribosomal protein S10p/S20e family protein 0 Ribosomal protein S10p/S20e family protein;(source:Araport11) Ipc03G0014760 AT4G00100.1 ribosomal protein S13A Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development The mRNA is cell-to-cell mobile. ribosomal protein S13A;(source:Araport11) Ipc03G0014770 AT1G12310.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0014780 AT5G51560.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0014790 AT5G62280.1 Protein of unknown function (DUF1442) 0 DUF1442 family protein (DUF1442);(source:Araport11) Ipc03G0014800 AT1G12380.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0014810 AT5G51640.1 Plant protein of unknown function (DUF828) Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc03G0014820 AT5G51680.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0014830 AT5G51690.1 1-amino-cyclopropane-1-carboxylate synthase 12 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. 1-amino-cyclopropane-1-carboxylate synthase 12;(source:Araport11) Ipc03G0014840 AT4G11990.1 Cell cycle regulated microtubule associated protein 0 Cell cycle regulated microtubule associated protein;(source:Araport11) Ipc03G0014850 AT5G07180.1 ERECTA-like 2 Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments. ERECTA-like 2;(source:Araport11) Ipc03G0014860 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc03G0014870 AT5G62190.1 DEAD box RNA helicase (PRH75) DEAD/DEAH box RNA helicase PRH75 DEAD box RNA helicase (PRH75);(source:Araport11) Ipc03G0014880 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0014890 AT2G28100.1 alpha-L-fucosidase 1 Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase The mRNA is cell-to-cell mobile. alpha-L-fucosidase 1;(source:Araport11) Ipc03G0014900 AT5G51760.2 0 Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination. Protein phosphatase 2C family protein;(source:Araport11) Ipc03G0014910 AT2G45590.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0014920 AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0014930 AT5G51800.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0014940 AT4G25420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0014950 AT5G62165.3 AGAMOUS-like 42 Encodes a MADS box transcription factor. Expressed in quiescent center. Involved in floral transition. AGAMOUS-like 42;(source:Araport11) Ipc03G0014960 AT5G51950.3 0 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc03G0014970 AT4G25433.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc03G0014980 AT1G80210.2 Mov34/MPN/PAD-1 family protein 0 Mov34/MPN/PAD-1 family protein;(source:Araport11) Ipc03G0014990 AT1G12580.1 phosphoenolpyruvate carboxylase-related kinase 1 0 phosphoenolpyruvate carboxylase-related kinase 1;(source:Araport11) Ipc03G0015000 AT4G25450.1 non-intrinsic ABC protein 8 member of NAP subfamily non-intrinsic ABC protein 8;(source:Araport11) Ipc03G0015010 AT1G16560.9 0 0 Per1-like family protein;(source:Araport11) Ipc03G0015020 AT5G51990.1 C-repeat-binding factor 4 encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF4). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to drought stress and abscisic acid treatment, but not to low temperature. C-repeat-binding factor 4;(source:Araport11) Ipc03G0015030 AT5G52020.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0015040 AT5G52030.2 TraB family protein 0 TraB family protein;(source:Araport11) Ipc03G0015050 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc03G0015060 AT4G25500.4 arginine/serine-rich splicing factor 35 Encodes an arginine/serine-rich splicing factor. The transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RS40 binds to HYL1 and co-localizes to the nuclear dicing body. Along with RS41, it appears to be involved in pri-miRNA processing and miRNA biogenesis (DOI:10.1093/nar/gkv751). arginine/serine-rich splicing factor 35;(source:Araport11) Ipc03G0015070 AT4G23030.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc03G0015080 AT5G65840.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc03G0015090 AT5G52060.1 BCL-2-associated athanogene 1 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 1;(source:Araport11) Ipc03G0015100 AT5G52100.1 Dihydrodipicolinate reductase, bacterial/plant Is essential for chloroplast NAD(P)H dehydrogenase activity, which is involved in electron transfer between PSII and PSI. Likely functions in biogenesis or stabilization of the NAD(P)H dehydrogenase complex. The mRNA is cell-to-cell mobile. Dihydrodipicolinate reductase, bacterial/plant;(source:Araport11) Ipc03G0015110 AT3G61060.1 phloem protein 2-A13 0 phloem protein 2-A13;(source:Araport11) Ipc03G0015120 AT3G63530.2 RING/U-box superfamily protein Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation. RING/U-box superfamily protein;(source:Araport11) Ipc03G0015130 AT4G00750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0015140 AT4G23060.1 IQ-domain 22 0 IQ-domain 22;(source:Araport11) Ipc03G0015150 AT5G62065.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0015160 AT5G07270.1 XB3 ortholog 3 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc03G0015170 AT5G52230.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 13;(source:Araport11) Ipc03G0015180 AT3G48880.3 0 Encodes an F-box protein, SNIPER4, that regulates the turnover of MUSE13 and MUSE14, redundant TRAF proteins serving as adaptors in the SCFCRP1 complex to facilitate the turnover of nucleotide-binding domain and leucine-rich repeats (NLR) immune receptors. RNI-like superfamily protein;(source:Araport11) Ipc03G0015190 AT2G16700.1 actin depolymerizing factor 5 Encodes actin depolymerizing factor 5 (ADF5). actin depolymerizing factor 5;(source:Araport11) Ipc03G0015200 AT5G52280.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc03G0015210 AT5G52290.1 shortage in chiasmata 1 Encodes a protein with similarity to XPF endonucleases. Loss of function mutations have defects in meiosis- specifically a reduction in the number of chiasmata. As a result both pollen and embryo sacs are abnormal and plants have severely reduced fertility. shortage in chiasmata 1;(source:Araport11) Ipc03G0015220 AT3G60050.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0015230 AT3G48970.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0015240 AT5G23850.1 Arabidopsis thaliana protein of unknown function (DUF821) 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc03G0015250 AT3G22270.1 Topoisomerase II-associated protein PAT1 0 Topoisomerase II-associated protein PAT1;(source:Araport11) Ipc03G0015260 AT5G23850.1 Arabidopsis thaliana protein of unknown function (DUF821) 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc03G0015270 AT5G23890.1 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc03G0015280 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc03G0015290 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc08G0006730 #N/A #N/A #N/A #N/A Ipc08G0006740 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006750 AT3G12720.1 myb domain protein 67 Member of the R2R3 factor gene family. myb domain protein 67;(source:Araport11) Ipc08G0006760 AT5G64610.1 histone acetyltransferase of the MYST family 1 Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5. histone acetyltransferase of the MYST family 1;(source:Araport11) Ipc08G0006770 #N/A #N/A #N/A #N/A Ipc08G0006780 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0006790 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006800 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006810 AT3G45830.1 0 0 nuclear factor kappa-B-binding-like protein;(source:Araport11) Ipc08G0006820 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006840 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006850 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0005750 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0005740 AT5G24740.2 Protein of unknown function (DUF1162) Encodes a vacuolar sorting protein that interacts with the plant-specific GRAS family transcription factor SHORT-ROOT and acts in a pathway that controls root growth and radial patterning. It provides a connections between gibberellic acid, SHR and PLT signaling in the root. vacuolar protein sorting-associated protein, putative (DUF1162);(source:Araport11) Ipc02G0005730 AT2G18900.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0005720 AT1G60930.1 RECQ helicase L4B AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination. RECQ helicase L4B;(source:Araport11) Ipc02G0005710 AT1G01040.1 dicer-like 1 Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs. The mRNA is cell-to-cell mobile. dicer-like 1;(source:Araport11) Ipc02G0005700 AT1G01060.4 Homeodomain-like superfamily protein LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1 Homeodomain-like superfamily protein;(source:Araport11) Ipc02G0005690 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc02G0005680 AT2G46820.2 photosystem I P subunit Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits. photosystem I P subunit;(source:Araport11) Ipc02G0005670 AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc02G0005660 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0005650 AT4G01395.1 0 0 conserved oligomeric Golgi complex subunit 4;(source:Araport11) Ipc02G0005640 AT1G01090.1 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha subunit pyruvate dehydrogenase E1 alpha;(source:Araport11) Ipc02G0005630 AT4G00800.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0005620 AT4G00820.1 IQ-domain 17 0 IQ-domain 17;(source:Araport11) Ipc02G0005610 AT3G61610.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc02G0005600 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0005590 AT4G00830.6 0 Encodes a heterogeneous nuclear ribonucleoprotein (hnRNP-Q) that is involved in the plant innate immune response and may function as a suppressor of cell-autonomous immunity. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0005580 AT1G01120.1 3-ketoacyl-CoA synthase 1 Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis. 3-ketoacyl-CoA synthase 1;(source:Araport11) Ipc02G0005570 AT2G34780.1 maternal effect embryo arrest 22 Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway. maternal effect embryo arrest 22;(source:Araport11) Ipc02G0005560 AT4G00840.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc02G0005550 AT1G65681.1 beta expansin 6 Encodes a beta-expansin EXPB6. Thought to be a pseudogene in Columbia, but a full-length gene in Landsberg erecta (Plant J 44:409-419, 2005). The current gene model on TAIR suggests it may not be a pseudogene in Columbia as previous suggested. beta expansin 6;(source:Araport11) Ipc02G0005540 AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 is bHLH transcriptional regulator. It functions as a JAZ-interacting transcription factor that acts together with MYC2 and MYC3 to activate JA-responses. It also functions in blue light mediated secondary cell wall biogenesis via regulation of NST1 expression. MYC4 directly binds to NST1 promoter and activates its expression. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc02G0005530 AT2G46710.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain ROP (Rho of plant GTPases) family member Involved in cell wall patterning. Encodes ROP inactivator, regulates the formation of ROP-activated domains; these in turn determined the pattern of cell wall pits. Positively regulates pit formation, but negatively regulates pit size, required for periodic formation of secondary cell wall pits. Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc02G0005520 AT3G18080.1 B-S glucosidase 44 0 B-S glucosidase 44;(source:Araport11) Ipc02G0005510 AT2G46700.1 CDPK-related kinase 3 0 CDPK-related kinase 3;(source:Araport11) Ipc02G0005500 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0005490 AT2G46660.1 cytochrome P450, family 78, subfamily A, polypeptide 6 Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth. cytochrome P450, family 78, subfamily A, polypeptide 6;(source:Araport11) Ipc02G0005480 AT5G53560.1 cytochrome B5 isoform E Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. cytochrome B5 isoform E;(source:Araport11) Ipc02G0005470 AT3G61870.1 0 0 plant/protein;(source:Araport11) Ipc02G0005460 AT2G46620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0005450 AT4G09650.1 ATP synthase delta-subunit gene Encodes the chloroplast ATPase delta-subunit. The mRNA is cell-to-cell mobile. F-type H+-transporting ATPase subunit delta;(source:Araport11) Ipc02G0005440 AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0005430 AT2G46600.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0005420 AT1G01220.7 0 Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis. L-fucokinase/GDP-L-fucose pyrophosphorylase;(source:Araport11) Ipc02G0005410 AT5G42000.1 ORMDL family protein 0 ORMDL family protein;(source:Araport11) Ipc02G0005400 AT3G54000.1 0 0 TIP41-like protein;(source:Araport11) Ipc02G0005390 AT1G47278.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0005380 AT1G18890.1 calcium-dependent protein kinase 1 encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. calcium-dependent protein kinase 1;(source:Araport11) Ipc02G0005370 AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein 0 Nodulin-like / Major Facilitator Superfamily protein;(source:Araport11) Ipc02G0005360 AT3G28510.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0005350 AT3G24620.1 RHO guanyl-nucleotide exchange factor 8 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 8;(source:Araport11) Ipc02G0005340 AT5G20110.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc02G0005330 AT5G62610.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0005320 AT3G08720.4 0 Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. serine/threonine protein kinase 2;(source:Araport11) Ipc02G0005310 AT1G19000.2 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc02G0005300 AT1G09980.3 0 0 Putative serine esterase family protein;(source:Araport11) Ipc02G0005290 AT5G62910.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0005280 AT3G48090.1 alpha/beta-Hydrolases superfamily protein Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0005270 AT1G74890.1 response regulator 15 Encodes a nuclear response regulator that acts as a negative regulator in cytokinin-mediated signal transduction. Transcript accumulates in leaves and roots in response to cytokinin treatment. response regulator 15;(source:Araport11) Ipc02G0005260 AT3G48120.1 0 0 serine/arginine-rich splicing factor;(source:Araport11) Ipc02G0005250 AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX. pyridoxin (pyrodoxamine) 5-phosphate oxidase;(source:Araport11) Ipc02G0005240 AT1G74910.2 ADP-glucose pyrophosphorylase family protein KONJAC1 is imilar to sugar pyrophosphorylases but has an insertion of 2 AA in the pyrophosphorylase consensus motif that is highly conserved in GMPPs. It lacks GDP-mannose pyrophosphorylase activity but can simulate GDP-mannose pyrophosphorylase activity of VTC1. ADP-glucose pyrophosphorylase family protein;(source:Araport11) Ipc02G0005230 AT5G13690.1 alpha-N-acetylglucosaminidase family / NAGLU family Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development. alpha-N-acetylglucosaminidase family / NAGLU family;(source:Araport11) Ipc02G0005220 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0005210 AT2G39140.1 pseudouridine synthase family protein Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins. pseudouridine synthase family protein;(source:Araport11) Ipc02G0005200 AT5G50120.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0005190 AT4G17690.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0005180 AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0005170 AT2G14255.1 Ankyrin repeat family protein with DHHC zinc finger domain 0 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11) Ipc02G0005160 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc02G0005150 AT5G62890.3 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc12G0007910 AT1G18835.1 mini zinc finger Encodes a small zinc finger protein whose overexpression induces ectopic meristem formation on leaf margins. mini zinc finger;(source:Araport11) Ipc12G0007920 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc12G0007930 AT3G47600.1 myb domain protein 94 Encodes a putative transcription factor (MYB94). myb domain protein 94;(source:Araport11) Ipc12G0007940 AT1G74640.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0007950 AT1G52980.1 GTP-binding family protein Encodes a GTPase that belongs to the subfamily of YlqF/YawG GTPases. Functions in Pre-60S ribosomal subunit maturation. The mRNA is cell-to-cell mobile. GTP-binding family protein;(source:Araport11) Ipc12G0007960 AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein 0 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein;(source:Araport11) Ipc12G0007970 AT1G74590.1 glutathione S-transferase TAU 10 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 10;(source:Araport11) Ipc12G0007990 AT1G74580.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0007980 AT4G23290.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 21 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 21;(source:Araport11) Ipc12G0008000 #N/A #N/A #N/A #N/A Ipc12G0008010 AT3G47610.1 transcription regulators;zinc ion binding 0 transcription regulator/ zinc ion binding protein;(source:Araport11) Ipc12G0008020 AT1G26850.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0008030 AT1G18810.1 phytochrome kinase substrate-related 0 phytochrome kinase substrate-like protein;(source:Araport11) Ipc12G0008040 AT2G44065.3 0 0 Ribosomal protein L2 family;(source:Araport11) Ipc12G0008050 AT1G18800.1 NAP1-related protein 2 Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. Plant mutated in both NRP1 and NRP2 genes show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. NRP genes act synergistically with NAP1 genes in promoting somatic homologous recombination. NAP1-related protein 2;(source:Araport11) Ipc12G0008060 AT2G47030.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0008070 AT3G19010.4 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0008080 AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner. TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14;(source:Araport11) Ipc12G0008090 AT2G04270.5 RNAse E/G-like Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose. RNAse E/G-like protein;(source:Araport11) Ipc12G0008100 AT3G47640.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0008110 AT1G74520.2 0 Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible. HVA22 homologue A;(source:Araport11) Ipc12G0008120 AT5G62500.1 end binding protein 1B Encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. end binding protein 1B;(source:Araport11) Ipc12G0008130 AT3G14300.1 pectinesterase family protein 0 pectinesterase family protein;(source:Araport11) Ipc12G0008140 AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc12G0008150 AT3G47700.1 RINT-1 / TIP-1 family Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins. Member of MAG2 complex, involved in the development of vegetative organs. RINT-1 / TIP-1 family;(source:Araport11) Ipc12G0008160 AT1G74510.3 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0008170 AT4G02660.3 0 0 Beige/BEACH and WD40 domain-containing protein;(source:Araport11) Ipc12G0008190 #N/A #N/A #N/A #N/A Ipc12G0008180 AT1G21130.2 O-methyltransferase family protein 0 O-methyltransferase family protein;(source:Araport11) Ipc12G0008200 #N/A #N/A #N/A #N/A Ipc12G0008210 AT1G66400.1 calmodulin like 23 Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23;(source:Araport11) Ipc12G0008220 AT1G79610.1 Na+/H+ antiporter 6 Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity. Na+/H+ antiporter 6;(source:Araport11) Ipc12G0008240 AT1G29170.2 SCAR family protein Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments. SCAR family protein;(source:Araport11) Ipc12G0008230 AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes STC8 (salt tolerant callus 8)/bHLH106 (basic helix-loop-helix transcription factor bHLH106). Knockout lines are more sensitive to NaCl, KCl, LiCl, ABA, and low temperatures than the wild-type. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0008250 AT1G54220.2 Dihydrolipoamide acetyltransferase, long form protein Encodes a subunit of the mitochondrial pyruvate dehydrogenase complex. Dihydrolipoamide acetyltransferase, long form protein;(source:Araport11) Ipc12G0008260 AT3G47710.1 BANQUO 3 BNQ3 belongs to a family of atypical non-DNA binding basic helix-loop-helix (bHLH) proteins that heterodimerize with and negatively regulate bHLH transcription factors. Directly and negatively regulated by AP3 and PI in petals. Required for appropriate regulation of flowering time.May also have a role in regulating light responses. BANQUO 3;(source:Araport11) Ipc12G0008270 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc12G0008280 AT3G47780.1 ABC2 homolog 6 member of ATH subfamily The mRNA is cell-to-cell mobile. ABC2 homolog 6;(source:Araport11) Ipc12G0008290 AT3G47780.1 ABC2 homolog 6 member of ATH subfamily The mRNA is cell-to-cell mobile. ABC2 homolog 6;(source:Araport11) Ipc12G0008300 AT3G47730.1 ATP-binding cassette A2 member of ATH subfamily ATP-binding cassette A2;(source:Araport11) Ipc12G0008310 AT5G09670.2 loricrin-related 0 loricrin-like protein;(source:Araport11) Ipc12G0008320 AT3G47780.1 ABC2 homolog 6 member of ATH subfamily The mRNA is cell-to-cell mobile. ABC2 homolog 6;(source:Araport11) Ipc12G0008330 AT3G17700.1 cyclic nucleotide-binding transporter 1 cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. The mRNA is cell-to-cell mobile. cyclic nucleotide-binding transporter 1;(source:Araport11) Ipc12G0008340 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0008350 AT5G62550.1 0 0 microtubule-associated futsch-like protein;(source:Araport11) Ipc12G0008360 AT2G02760.4 0 ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. ubiquiting-conjugating enzyme 2;(source:Araport11) Ipc12G0008370 AT1G18860.1 WRKY DNA-binding protein 61 member of WRKY Transcription Factor; Group II-b WRKY DNA-binding protein 61;(source:Araport11) Ipc12G0008380 AT3G51000.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0008390 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) Ipc12G0008400 AT5G62530.1 aldehyde dehydrogenase 12A1 Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. aldehyde dehydrogenase 12A1;(source:Araport11) Ipc12G0008410 AT5G39890.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc12G0008420 AT1G18870.1 isochorismate synthase 2 Encodes a protein with isochorismate synthase activity involved in phylloquinone biosynthesis. Mutant studies of this gene's function suggest that its function is redundant with that of ICS1 (AT1G7410). isochorismate synthase 2;(source:Araport11) Ipc12G0008430 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc12G0008440 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc12G0008450 AT5G62750.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0008460 AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc12G0008470 AT4G30600.2 0 0 signal recognition particle receptor alpha subunit family protein;(source:Araport11) Ipc12G0008480 AT2G02390.1 glutathione S-transferase zeta 1 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism. glutathione S-transferase zeta 1;(source:Araport11) Ipc12G0008490 AT2G02380.1 glutathione S-transferase (class zeta) 2 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase (class zeta) 2;(source:Araport11) Ipc12G0008500 AT1G69850.1 nitrate transporter 1:2 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems. nitrate transporter 1:2;(source:Araport11) Ipc12G0008510 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0008520 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc12G0008530 AT5G62720.1 Integral membrane HPP family protein 0 Integral membrane HPP family protein;(source:Araport11) Ipc12G0008540 AT5G60040.1 nuclear RNA polymerase C1 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1;(source:Araport11) Ipc12G0008550 AT3G29260.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0008560 AT5G64950.1 Mitochondrial transcription termination factor family protein mTERF family protein which functions in the regulation of mtDNA transcription. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc12G0008570 AT3G54000.3 0 0 TIP41-like protein;(source:Araport11) Ipc12G0008580 AT5G41290.1 Receptor-like protein kinase-related family protein 0 Receptor-like protein kinase-related family protein;(source:Araport11) Ipc12G0008590 AT5G62710.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0008600 AT5G28470.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc12G0008610 AT1G58350.4 0 0 Putative serine esterase family protein;(source:Araport11) Ipc12G0008620 AT1G09980.2 Putative serine esterase family protein 0 Putative serine esterase family protein;(source:Araport11) Ipc12G0008630 AT1G74840.2 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc12G0008640 AT5G62600.1 ARM repeat superfamily protein Encodes a nuclear importer of serine-arginine rich (SR) proteins and is involved in the regulation of splicing of R genes by regulating the import of the SR proteins into the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc12G0008650 AT5G11010.4 0 0 Pre-mRNA cleavage complex II protein family;(source:Araport11) Ipc12G0008660 AT1G74830.1 Protein of unknown function, DUF593 0 myosin-binding protein, putative (Protein of unknown function, DUF593);(source:Araport11) Ipc12G0008670 AT1G18970.1 germin-like protein 4 Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record). germin-like protein 4;(source:Araport11) Ipc12G0008680 AT3G47850.1 0 0 tRNA (Ile)-lysidine synthase;(source:Araport11) Ipc12G0008690 AT5G62620.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced seed coat mucilage and accelerated leaf senescence. Galactosyltransferase family protein;(source:Araport11) Ipc12G0008700 AT3G23290.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc12G0008710 AT1G74750.4 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0008720 AT3G47890.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc12G0008730 AT1G74770.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc12G0008740 #N/A #N/A #N/A #N/A Ipc12G0008750 AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein 0 Nodulin-like / Major Facilitator Superfamily protein;(source:Araport11) Ipc12G0008760 AT1G74790.1 catalytics 0 catalytics;(source:Araport11) Ipc12G0008770 AT1G18950.3 0 0 DDT domain superfamily;(source:Araport11) Ipc12G0008780 AT1G18890.1 calcium-dependent protein kinase 1 encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. calcium-dependent protein kinase 1;(source:Araport11) Ipc12G0008790 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc12G0008800 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc12G0008810 AT3G47940.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc12G0008820 AT3G47950.2 0 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase H[+]-ATPase 4;(source:Araport11) Ipc12G0008830 AT5G62680.1 Major facilitator superfamily protein Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds. Major facilitator superfamily protein;(source:Araport11) Ipc12G0008840 AT5G62920.1 response regulator 6 Encodes a Type-A response regulator that is responsive to cytokinin treatment. Its C-ter domain is very short in comparison to other Arabidopsis ARRs (17 total). Arr6 protein is stabilized by cytokinin. response regulator 6;(source:Araport11) Ipc12G0008850 AT4G12730.1 FASCICLIN-like arabinogalactan 2 AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds FASCICLIN-like arabinogalactan 2;(source:Araport11) Ipc12G0008860 AT5G62910.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0008870 AT5G19410.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc12G0008880 AT1G24200.1 Paired amphipathic helix (PAH2) superfamily protein 0 Paired amphipathic helix (PAH2) superfamily protein;(source:Araport11) Ipc12G0008890 AT3G55620.1 Translation initiation factor IF6 0 Translation initiation factor IF6;(source:Araport11) Ipc12G0008900 AT3G48140.1 B12D protein 0 B12D protein;(source:Araport11) Ipc12G0008910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0008920 AT3G48150.1 anaphase-promoting complex subunit 8 anaphase-promoting complex or cyclosome subunit anaphase-promoting complex subunit 8;(source:Araport11) Ipc12G0008930 AT3G48160.2 DP-E2F-like 1 E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle. DP-E2F-like 1;(source:Araport11) Ipc12G0008940 AT1G74920.1 aldehyde dehydrogenase 10A8 ALDH10A8 encodes a protein that has not been functionally characterized, but it is similar to an Arabidopsis protein that has betaine aldehyde dehydrogenase and aminoaldehyde dehydrogenase activity. ALDH10A8 localizes to leucoplasts. aldh10a8 mutant plants are more susceptible to NaCl and dehydration stress. aldehyde dehydrogenase 10A8;(source:Araport11) Ipc12G0008950 AT3G48180.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc12G0008960 AT2G45010.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc12G0008970 AT1G08010.3 0 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 11;(source:Araport11) Ipc12G0008980 AT1G27210.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0008990 AT2G18110.1 Translation elongation factor EF1B/ribosomal protein S6 family protein 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc12G0009000 AT5G50120.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0009010 AT3G47830.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc12G0009020 AT5G27880.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc12G0009030 AT1G27520.1 Glycosyl hydrolase family 47 protein 0 Glycosyl hydrolase family 47 protein;(source:Araport11) Ipc12G0009040 AT5G14920.1 Gibberellin-regulated family protein Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation. Gibberellin-regulated family protein;(source:Araport11) Ipc12G0009050 AT3G60050.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0009060 AT4G25800.2 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc12G0009070 AT5G62570.1 Calmodulin binding protein-like 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc12G0009080 AT5G62570.4 0 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc12G0009090 AT5G62570.2 Calmodulin binding protein-like 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc12G0009100 AT5G50100.1 Putative thiol-disulphide oxidoreductase DCC Encodes a putative thioredoxin DCC1 involved in determining shoot regeneration capacity. It interacts directly with CARBONIC ANHYDRASE 2 (CA2), an essential subunit of respiratory chain NADH dehydrogenase complex (Complex I) and regulates Complex I activity via redox modification of CA2. Putative thiol-disulfide oxidoreductase DCC;(source:Araport11) Ipc12G0009110 AT5G62575.2 0 Encodes subunit 7 of mitochondrial complex II (succinate dehydrogenase complex) and participates in the respiratory chain. It contributes to anchoring succinate dehydrogenase to the inner mitochondrial membrane. The mRNA is cell-to-cell mobile. succinate dehydrogenase subunit;(source:Araport11) Ipc12G0009120 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc12G0009130 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0009140 AT2G17320.2 0 0 pantothenate kinase;(source:Araport11) Ipc12G0009150 AT1G60010.1 0 0 D-ribose-binding periplasmic protein;(source:Araport11) Ipc12G0009160 AT5G62890.3 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc12G0009170 AT3G48050.2 BAH domain ;TFIIS helical bundle-like domain Encodes a large protein with N-terminal bromo-adjacent homology (BAH) and transcription elongation factor S-II (TFS2N) domains and two C-terminal GW (glycine and tryptophan) repeats. It is nuclear and colocalizes with the processing-body component DCP1 in the cytoplasm. SOU is a component of the miRNA pathway and is involved in translational repression. protein SUO;(source:Araport11) Ipc12G0009180 AT3G48040.1 RHO-related protein from plants 10 Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling. RHO-related protein from plants 10;(source:Araport11) Ipc12G0009190 AT1G07830.1 ribosomal protein L29 family protein 0 ribosomal protein L29 family protein;(source:Araport11) Ipc12G0009200 AT5G40200.1 DegP protease 9 Encodes a putative DegP protease. The mRNA is cell-to-cell mobile. DegP protease 9;(source:Araport11) Ipc12G0009210 AT4G11130.1 RNA-dependent RNA polymerase 2 Encodes RNA-dependent RNA polymerase that is required for endogenous siRNA (but not miRNA) formation. Nomenclature according to Xie, et al. (2004). RNA-dependent RNA polymerase 2;(source:Araport11) Ipc12G0009220 AT1G30450.3 cation-chloride co-transporter 1 member of Cation-chloride co-transporter family cation-chloride co-transporter 1;(source:Araport11) Ipc12G0009230 AT3G23600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0009240 AT3G23600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0009250 AT5G14870.1 cyclic nucleotide-gated channel 18 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth and pollen tube guidance to ovules. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. Also functions as a Ca2+ permeable channel. cyclic nucleotide-gated channel 18;(source:Araport11) Ipc12G0009260 AT1G64640.1 early nodulin-like protein 8 0 early nodulin-like protein 8;(source:Araport11) Ipc12G0009270 AT3G48000.1 aldehyde dehydrogenase 2B4 Encodes a putative (NAD+) aldehyde dehydrogenase. aldehyde dehydrogenase 2B4;(source:Araport11) Ipc12G0009280 AT1G60190.1 ARM repeat superfamily protein Encodes PUB19, a plant U-box armadillo repeat protein. Involved in salt inhibition of germination together with PUB18. The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc12G0009290 AT5G08510.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0009300 AT1G76390.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0009310 AT5G14860.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0009320 AT5G13680.1 IKI3 family protein A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1–ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Mutants have no ncm5U (5-carbamoylmethyluridine). IKI3 family protein;(source:Araport11) Ipc12G0009330 AT5G14860.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0009340 AT1G74410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0009350 AT5G62850.1 Nodulin MtN3 family protein Encodes a protein that is expressed in vegetative cells of pollen. A member of the SWEET sucrose efflux transporter family proteins. Nodulin MtN3 family protein;(source:Araport11) Ipc12G0009360 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc12G0009370 AT1G27510.1 Protein of unknown function (DUF3506) Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death. UvrB/UvrC domain protein (DUF3506);(source:Araport11) Ipc12G0009380 AT2G36330.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc12G0009390 AT1G62400.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0009400 AT1G27500.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0009410 AT2G25355.1 PNAS-3 related 0 PNAS-3-like protein;(source:Araport11) Ipc12G0009420 AT5G62790.1 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype. 1-deoxy-D-xylulose 5-phosphate reductoisomerase;(source:Araport11) Ipc12G0009430 AT1G23710.1 Protein of unknown function (DUF1645) 0 hypothetical protein (DUF1645);(source:Araport11) Ipc12G0009440 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0009450 AT2G07505.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc12G0009460 AT1G52343.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0009470 AT5G62520.1 similar to RCD one 5 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to RCD one 5;(source:Araport11) Ipc12G0009480 AT3G48190.2 0 Encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role homologous recombination for DNA damage repair in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. Serine/Threonine-kinase ATM-like protein;(source:Araport11) Ipc12G0009490 AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc12G0009500 AT5G02850.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0009510 AT4G22220.1 SufE/NifU family protein Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein. SufE/NifU family protein;(source:Araport11) Ipc12G0009520 AT1G02080.2 transcription regulators Acts as scaffold protein in the CCR4-NOT complex, by interacting with various NOT proteins and CAF1. transcription regulator;(source:Araport11) Ipc12G0009530 AT5G25770.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0009540 AT5G10080.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0009550 AT3G62270.1 HCO3- transporter family BOR2 is involved in efficient borate crosslinking of rhamnogalacturonan II in cell walls under boron limitation. HCO3- transporter family;(source:Araport11) Ipc12G0009560 AT5G61550.2 U-box domain-containing protein kinase family protein 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc12G0009570 AT1G06110.1 SKP1/ASK-interacting protein 16 0 SKP1/ASK-interacting protein 16;(source:Araport11) Ipc12G0009580 AT2G30780.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0009590 AT3G48200.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0009600 AT5G63010.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0009610 AT4G27595.2 0 Encodes a microtubule-associated protein. WEB family protein (DUF827);(source:Araport11) Ipc12G0009620 AT1G12470.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc12G0009630 AT1G19100.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes a member of the conserved Microrchidia (MORC) adenosine triphosphatase (ATPase) family, predicted to catalyze alterations in chromosome superstructure. Required for heterochromatin condensation and gene silencing. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc12G0009640 AT2G41460.4 0 Apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair. apurinic endonuclease-redox protein;(source:Araport11) Ipc12G0009650 AT1G18070.2 Translation elongation factor EF1A/initiation factor IF2gamma family protein 0 Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11) Ipc12G0009660 AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a putative apoplastic lipid transfer protein that is involved in systemic acquired resistance. Mutants in this gene exhibit wild-type local resistance to avirulent and virulent Pseudomonas syringae, but pathogenesis-related gene expression is abolished in uninoculated distant leaves and fail to develop SAR to virulent Pseudomonas or Peronospora parasitica. DIR1 protein is cell-to-cell mobile and is transported via phloem sap. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0009670 AT1G11760.1 0 Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. MED32 has now been annotated as the MED2 subunit of the Mediator complex. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc12G0009680 AT1G18070.2 Translation elongation factor EF1A/initiation factor IF2gamma family protein 0 Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11) Ipc12G0009690 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0009700 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc12G0009710 AT4G19180.3 0 Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence. GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11) Ipc12G0009720 AT5G63060.2 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc12G0009730 AT4G10790.1 UBX domain-containing protein Encodes a member of the plant UBX-domain containing (PUX) protein family. It is an integral lipid droplet (LD) protein that associates with a subpopulation of LDs during seed germination. It likely acts as an adaptor recruiting CDC48A to ubiquitinated oleosins, thus facilitating the dislocation of oleosins from LDs by the segregase activity of CDC48A. UBX domain-containing protein;(source:Araport11) Ipc12G0009740 AT5G50150.1 Protein of Unknown Function (DUF239) LOTR1 protein has an unknown function. It contains both DUF4409 and DUF239 domains. Loss of function mutations show defects in formation of the Casparian band- which is correlated with mis localization of CASP1. NEP-interacting protein, putative (DUF239);(source:Araport11) Ipc12G0009750 AT3G49190.1 O-acyltransferase (WSD1-like) family protein 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc12G0009760 AT5G56040.2 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0009770 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0009780 AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ClpS1 is a member of the caseionolytic proteinase S family of N-recognins. It is involved in proteolysis in the chloroplast stroma. An arginine residue (Arg50) controls low-affinity substrate binding. Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11) Ipc12G0009790 AT5G50410.1 0 0 ribonucleoside-diphosphate reductase subunit beta;(source:Araport11) Ipc12G0009800 AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0009810 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0009820 AT4G01560.1 Ribosomal RNA processing Brix domain protein 0 Ribosomal RNA processing Brix domain protein;(source:Araport11) Ipc12G0009830 AT4G24670.2 tryptophan aminotransferase related 2 Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.TAR2 is required for reprogramming root architecture in response to low nitrogen conditions. tryptophan aminotransferase related 2;(source:Araport11) Ipc12G0009840 AT1G60780.1 Clathrin adaptor complexes medium subunit family protein 0 Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc12G0009850 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0009860 #N/A #N/A #N/A #N/A Ipc12G0009870 AT4G24750.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc12G0009880 AT5G63090.4 Lateral organ boundaries (LOB) domain family protein Involved in lateral organ development Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc12G0009890 AT5G63100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0009900 AT1G57560.1 myb domain protein 50 Member of the R2R3 factor gene family. myb domain protein 50;(source:Araport11) Ipc12G0009910 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0009920 AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc12G0009930 AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0009940 AT5G53870.2 0 0 early nodulin-like protein 1;(source:Araport11) Ipc12G0009950 AT5G63135.1 0 0 transcription termination factor;(source:Araport11) Ipc12G0009960 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc12G0009970 AT5G05850.1 plant intracellular ras group-related LRR 1 Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen. plant intracellular ras group-related LRR 1;(source:Araport11) Ipc12G0009980 AT4G24690.1 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein Encodes NBR1, a selective autophagy substrate. The mRNA is cell-to-cell mobile. ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein;(source:Araport11) Ipc12G0009990 AT3G48250.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein implicated in splicing of intron 1 of mitochondrial nad7 transcripts. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0010000 AT3G48770.2 0 0 ATP/DNA binding protein;(source:Araport11) Ipc12G0010010 AT5G50700.1 hydroxysteroid dehydrogenase 1 Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. hydroxysteroid dehydrogenase 1;(source:Araport11) Ipc12G0010020 AT4G24780.2 Pectin lyase-like superfamily protein Encodes a pectate lyase involved in response to nematodes. Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0010030 AT2G31880.1 Leucine-rich repeat protein kinase family protein Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0010040 AT3G57620.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc12G0010050 AT3G48500.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc12G0010060 AT3G13530.1 mitogen-activated protein kinase kinase kinase 7 MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7;(source:Araport11) Ipc12G0010070 AT1G78790.4 0 Encodes a protein with high similarity to mammalian MHF2 that acts in the same pathway as FANCM to restrain class II meiotic crossing over. centromere protein X;(source:Araport11) Ipc12G0010080 AT2G47000.6 0 Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation. ATP binding cassette subfamily B4;(source:Araport11) Ipc12G0010090 AT2G31955.5 0 COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria. cofactor of nitrate reductase and xanthine dehydrogenase 2;(source:Araport11) Ipc12G0010100 AT2G04220.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc12G0010110 #N/A #N/A #N/A #N/A Ipc12G0010120 AT4G05360.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0010130 AT4G24715.1 0 0 high-affinity nitrate transporter-like protein;(source:Araport11) Ipc12G0010140 AT4G24715.1 0 0 high-affinity nitrate transporter-like protein;(source:Araport11) Ipc12G0010150 AT4G24730.2 Calcineurin-like metallo-phosphoesterase superfamily protein 0 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein;(source:Araport11) Ipc12G0010160 AT1G01940.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc12G0010170 AT5G63160.1 BTB and TAZ domain protein 1 BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. BTB and TAZ domain protein 1;(source:Araport11) Ipc12G0010180 AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0010190 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc12G0010200 AT3G12930.1 Lojap-related protein 0 Lojap-related protein;(source:Araport11) Ipc12G0010210 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc12G0010220 AT1G56090.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0010230 AT1G16610.7 0 Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth. arginine/serine-rich 45;(source:Araport11) Ipc12G0010240 AT5G45030.2 Trypsin family protein 0 Trypsin family protein;(source:Araport11) Ipc12G0010250 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0010260 AT5G52390.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc12G0010270 AT3G12955.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc12G0010280 AT1G56050.1 GTP-binding protein-related 0 GTP-binding protein-like protein;(source:Araport11) Ipc12G0010290 #N/A #N/A #N/A #N/A Ipc12G0010300 AT1G21310.1 extensin 3 Encodes extensin 3. extensin 3;(source:Araport11) Ipc12G0010310 #N/A #N/A #N/A #N/A Ipc12G0010320 AT1G56000.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc12G0010330 AT1G16670.1 Protein kinase superfamily protein Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress. Protein kinase superfamily protein;(source:Araport11) Ipc12G0010340 AT5G43490.1 0 0 myb-like protein X;(source:Araport11) Ipc12G0010350 AT5G56290.1 peroxin 5 Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions. peroxin 5;(source:Araport11) Ipc12G0010360 AT1G55620.2 chloride channel F Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. chloride channel F;(source:Araport11) Ipc12G0010370 AT5G56230.1 prenylated RAB acceptor 1.G2 0 prenylated RAB acceptor 1.G2;(source:Araport11) Ipc12G0010380 AT5G56220.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0010390 AT4G26455.1 WPP domain interacting protein 1 Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells. WPP domain interacting protein 1;(source:Araport11) Ipc12G0010400 AT1G55670.1 photosystem I subunit G Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or "spontaneous" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin. photosystem I subunit G;(source:Araport11) Ipc12G0010410 AT1G55673.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0010420 AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 0 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1;(source:Araport11) Ipc12G0010430 AT1G73870.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc12G0010440 AT3G63300.1 FORKED 1 Encodes a pleckstrin homology domain- and DUF828-containing protein. Mutants have defects in leaf vascular pattering, with vascular bundles that fail to meet distally in both the cotyledons and leaves. Necessary to the formation of the closed leaf vascular pattern characteristic of dicot leaves in response to auxin. Redundant with FKD2. FKD1 may influence PIN1 localization in an auxin dependent manner. proposed to be a key component of the auxin canalization pathway. FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. FORKED 1;(source:Araport11) Ipc12G0010450 AT1G09070.1 soybean gene regulated by cold-2 SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting. The mRNA is cell-to-cell mobile. soybean gene regulated by cold-2;(source:Araport11) Ipc12G0010460 AT1G55690.5 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc12G0010470 AT4G00231.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0010480 AT4G26470.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc12G0010490 AT5G16850.1 telomerase reverse transcriptase Encodes the catalytic subunit of telomerase reverse transcriptase. Involved in telomere homeostasis. Homozygous double mutants with ATR show gross morphological defects over a period of generations. TERT shows Class II telomerase activity in vitro, indicating that it can initiate de novo telomerase synthesis on non-telomeric DNA, often using a preferred position within the telomerase-bound RNA. Loss of function mutants have reduced telomere length in roots and over a period of generations, decreasing root meristem function. telomerase reverse transcriptase;(source:Araport11) Ipc12G0010500 AT3G60050.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0010510 AT2G25090.1 CBL-interacting protein kinase 16 Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16) and is involved in salinity tolerance. CBL-interacting protein kinase 16;(source:Araport11) Ipc12G0010520 AT2G18500.1 ovate family protein 7 0 ovate family protein 7;(source:Araport11) Ipc12G0010530 AT4G35460.1 NADPH-dependent thioredoxin reductase B NADPH-dependent thioredoxin reductase 1 (NTR1. Similar to E.coli NTR and has conserved NADPH binding domains. NADPH-dependent thioredoxin reductase B;(source:Araport11) Ipc12G0010540 AT5G56140.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc12G0010550 AT5G56130.1 Transducin/WD40 repeat-like superfamily protein Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0010560 #N/A #N/A #N/A #N/A Ipc12G0010570 AT5G56120.1 0 0 RNA polymerase II elongation factor;(source:Araport11) Ipc12G0010580 AT5G23810.1 amino acid permease 7 Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. amino acid permease 7;(source:Araport11) Ipc12G0010590 AT1G49850.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0010600 AT5G23810.1 amino acid permease 7 Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. amino acid permease 7;(source:Araport11) Ipc12G0010610 AT5G23810.1 amino acid permease 7 Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. amino acid permease 7;(source:Araport11) Ipc12G0010620 AT3G13300.2 Transducin/WD40 repeat-like superfamily protein Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0010630 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc12G0010640 AT1G55760.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc12G0010650 AT3G20180.3 0 0 Copper transport protein family;(source:Araport11) Ipc12G0010660 AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0010670 AT4G26530.3 0 0 Aldolase superfamily protein;(source:Araport11) Ipc12G0010680 AT1G55810.6 0 One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively. uridine kinase-like 3;(source:Araport11) Ipc12G0010690 AT5G11290.2 0 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc12G0010700 AT3G44730.3 0 0 kinesin-like protein 1;(source:Araport11) Ipc12G0010710 AT2G04220.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc12G0010720 AT3G13226.1 regulatory protein RecX family protein 0 regulatory protein RecX family protein;(source:Araport11) Ipc12G0010730 AT5G56040.2 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0010740 AT3G13225.2 WW domain-containing protein 0 WW domain-containing protein;(source:Araport11) Ipc12G0010750 AT4G17190.1 farnesyl diphosphate synthase 2 Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers. farnesyl diphosphate synthase 2;(source:Araport11) Ipc12G0010760 AT5G55970.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0010770 AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein 0 Cwf15 / Cwc15 cell cycle control family protein;(source:Araport11) Ipc12G0010780 AT3G13220.1 ABC-2 type transporter family protein Encodes a ATP-binding cassette transporter G26 (ABCG26) involved in tapetal cell and pollen development. Required for male fertility and pollen exine formation. ABC-2 type transporter family protein;(source:Araport11) Ipc12G0010790 AT1G55840.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc12G0010800 AT1G55910.1 zinc transporter 11 precursor member of Putative zinc transporter ZIP2 - like family zinc transporter 11 precursor;(source:Araport11) Ipc12G0010810 AT1G55850.1 cellulose synthase like E1 encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase like E1;(source:Araport11) Ipc12G0010820 AT1G55850.1 cellulose synthase like E1 encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase like E1;(source:Araport11) Ipc12G0010830 AT3G07680.1 emp24/gp25L/p24 family/GOLD family protein Encodes an Golgi-localized p24 protein. Interacts with p24delta5 at ER export sites for ER exit and coupled transport to the Golgi apparatus. The mRNA is cell-to-cell mobile. emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc12G0010840 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc12G0010850 AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein 0 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein;(source:Araport11) Ipc12G0010860 AT1G55870.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA. Functions with AGS1 to regulate the poly(A) status of mitochondrial mRNA. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0010870 AT5G55830.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc12G0010880 AT5G47650.5 0 Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress. nudix hydrolase homolog 2;(source:Araport11) Ipc12G0010890 AT1G49490.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc12G0010900 AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0010910 AT4G14540.1 nuclear factor Y, subunit B3 0 nuclear factor Y, subunit B3;(source:Araport11) Ipc12G0010920 AT4G26630.2 DEK domain-containing chromatin associated protein Encodes a chromatin-associated protein that specifically binds histones H3 and H4 and contributes to modulation of Arabidopsis chromatin structure and function. DEK domain-containing chromatin associated protein;(source:Araport11) Ipc12G0010930 AT5G55640.1 0 0 Na-translocating NADH-quinone reductase subunit A;(source:Araport11) Ipc12G0010940 AT4G16400.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0010950 AT5G55630.2 Outward rectifying potassium channel protein Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins. Outward rectifying potassium channel protein;(source:Araport11) Ipc12G0010960 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0010970 AT1G55910.1 zinc transporter 11 precursor member of Putative zinc transporter ZIP2 - like family zinc transporter 11 precursor;(source:Araport11) Ipc12G0010980 AT5G55610.1 0 0 isopentenyl-diphosphate delta-isomerase;(source:Araport11) Ipc12G0010990 AT5G55600.3 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein 0 Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc12G0011000 AT3G52790.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc12G0011010 AT1G55920.1 serine acetyltransferase 2;1 Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. The mRNA is cell-to-cell mobile. serine acetyltransferase 2;(source:Araport11) Ipc12G0011020 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc12G0011030 AT4G35290.5 0 Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family glutamate receptor 2;(source:Araport11) Ipc12G0011040 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc12G0011050 AT3G13080.1 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc12G0011060 AT3G13080.1 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc12G0011070 AT3G13080.1 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc12G0011080 AT1G55930.2 0 0 CBS domain-containing protein / transporter associated domain-containing protein;(source:Araport11) Ipc12G0011090 AT1G55930.1 CBS domain-containing protein / transporter associated domain-containing protein 0 CBS domain-containing protein / transporter associated domain-containing protein;(source:Araport11) Ipc12G0011100 AT5G55580.1 Mitochondrial transcription termination factor family protein Encodes a mitochondrial transcription termination factor (mTERF) family protein. The gene product is targeted to the chloroplast and mutants are affected in chloroplast development. Mutants, named as twirt1 (twr-1), display altered root meristem function resulting in short roots. Mutation also affects shoot meristem function. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc12G0011110 AT5G55570.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0011120 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc12G0011130 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc12G0011140 AT4G26640.2 WRKY family transcription factor family protein member of WRKY Transcription Factor; Group I WRKY family transcription factor family protein;(source:Araport11) Ipc12G0011150 AT3G08680.2 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0011160 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0011170 AT5G55540.1 tornado 1 Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. tornado 1;(source:Araport11) Ipc12G0011180 AT5G55530.3 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc12G0011190 AT1G17880.1 basic transcription factor 3 0 basic transcription factor 3;(source:Araport11) Ipc12G0011200 AT3G20150.1 Kinesin motor family protein 0 Kinesin motor family protein;(source:Araport11) Ipc12G0011210 AT1G50575.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) Ipc12G0011220 AT5G59240.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc12G0011230 AT5G47540.1 Mo25 family protein 0 Mo25 family protein;(source:Araport11) Ipc12G0011250 AT5G55480.1 SHV3-like 1 Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. The mRNA is cell-to-cell mobile. SHV3-like 1;(source:Araport11) Ipc12G0011240 AT4G26690.1 PLC-like phosphodiesterase family protein Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. PLC-like phosphodiesterase family protein;(source:Araport11) Ipc12G0011260 AT4G22360.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) Ipc12G0011270 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc12G0011280 AT5G55340.1 MBOAT (membrane bound O-acyl transferase) family protein 0 MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11) Ipc12G0011290 AT5G55290.3 0 0 ATPase, V0 complex, subunit E;(source:Araport11) Ipc12G0011300 AT1G04950.3 TATA BOX ASSOCIATED FACTOR II 59 Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant. TATA BOX ASSOCIATED FACTOR II 59;(source:Araport11) Ipc12G0011310 AT5G55260.1 protein phosphatase X 2 Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase. protein phosphatase X 2;(source:Araport11) Ipc12G0011320 AT1G04970.1 lipid-binding serum glycoprotein family protein Encodes one of the two LBP/BPI related proteins (AT1G04970/LBR-1, AT3G20270/LBR-2) that bind to LPS directly and regulate PR1 expression. lipid-binding serum glycoprotein family protein;(source:Araport11) Ipc12G0011330 AT5G55250.1 IAA carboxylmethyltransferase 1 Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. IAA carboxylmethyltransferase 1;(source:Araport11) Ipc12G0011340 AT4G26770.1 Phosphatidate cytidylyltransferase family protein 0 Phosphatidate cytidylyltransferase family protein;(source:Araport11) Ipc12G0011350 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc12G0011360 AT3G20420.1 RNAse THREE-like protein 2 double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm. RNAse THREE-like protein 2;(source:Araport11) Ipc12G0011370 AT3G20800.1 Cell differentiation, Rcd1-like protein 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc12G0011380 AT1G50730.3 0 0 hypothetical protein;(source:Araport11) Ipc12G0011390 AT1G61340.2 F-box family protein Encodes a F-box protein induced by various biotic or abiotic stress. F-box family protein;(source:Araport11) Ipc12G0011400 AT3G14180.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc12G0011410 AT4G26900.1 HIS HF encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway HIS HF;(source:Araport11) Ipc12G0011420 AT4G26910.2 Dihydrolipoamide succinyltransferase 0 Dihydrolipoamide succinyltransferase;(source:Araport11) Ipc12G0011430 AT5G55060.1 0 0 Rab3 GTPase-activating protein catalytic subunit;(source:Araport11) Ipc12G0011440 AT1G62040.1 Ubiquitin-like superfamily protein Autophagy protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc12G0011450 AT1G05170.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc12G0011460 AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0 NADH:ubiquinone oxidoreductase, 17.2kDa subunit;(source:Araport11) Ipc12G0011470 AT3G20395.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0011480 AT3G20390.1 endoribonuclease L-PSP family protein Encodes a plastidial RidA (Reactive Intermediate Deaminase A) homolog that hydrolyzes the enamines/imines formed by Thr dehydratase from Ser or Thr. RidA accelerates the deamination of reactive enamine/imine intermediates produced by threonine dehydratase (At3g10050) with threonine or serine as substrates. In the absence of RidA, the serine-derived imine inactivates BCAT3 (At3g49680). RidA thus pre-empts damage to BCAT3 by hydrolyzing the reactive imine before it does damage. endoribonuclease L-PSP family protein;(source:Araport11) Ipc12G0011490 AT1G50660.1 0 0 actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11) Ipc12G0011500 AT3G20490.1 0 Involved in DNA repair. Mutants show accumulation of DNA lesions upon genotoxic stress Rho GTPase-activating protein;(source:Araport11) Ipc12G0011510 AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0 RNA-binding CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc12G0011520 AT4G27020.1 0 0 inositol-1,4,5-trisphosphate 5-phosphatase;(source:Araport11) Ipc12G0011530 AT4G27020.1 0 0 inositol-1,4,5-trisphosphate 5-phosphatase;(source:Araport11) Ipc12G0011540 AT4G27020.1 0 0 inositol-1,4,5-trisphosphate 5-phosphatase;(source:Araport11) Ipc12G0011550 AT5G54855.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc12G0011560 AT1G32120.1 0 0 serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0011570 AT1G07870.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0011580 AT3G20540.2 polymerase gamma 1 Encodes an organellar DNA polymerase I that is also involved in double strand break repair. polymerase gamma 1;(source:Araport11) Ipc12G0011590 AT4G21780.3 0 0 hypothetical protein;(source:Araport11) Ipc12G0011600 AT1G50900.1 Ankyrin repeat family protein Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein;(source:Araport11) Ipc12G0011610 AT5G54840.1 Ras-related small GTP-binding family protein Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes. Ras-related small GTP-binding family protein;(source:Araport11) Ipc12G0011620 AT5G54800.1 glucose 6-phosphate/phosphate translocator 1 Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development. The mRNA is cell-to-cell mobile. glucose 6-phosphate/phosphate translocator 1;(source:Araport11) Ipc12G0011630 AT4G14096.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc12G0011640 AT3G20560.1 PDI-like 5-3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). PDI-like 5-3;(source:Araport11) Ipc12G0011650 AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc12G0011660 AT5G54770.1 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer. The mRNA is cell-to-cell mobile. thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4);(source:Araport11) Ipc12G0011670 AT1G54290.1 Translation initiation factor SUI1 family protein 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc12G0011680 AT2G26430.1 arginine-rich cyclin 1 Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast. arginine-rich cyclin 1;(source:Araport11) Ipc12G0011690 AT4G05320.6 polyubiquitin 10 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc12G0011700 AT3G20600.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response. The mRNA is cell-to-cell mobile. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc12G0011710 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc12G0011720 AT4G01020.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc12G0011730 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc12G0011740 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc12G0011750 AT4G01020.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc12G0011760 AT4G04790.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0011770 AT3G20720.2 0 0 amino-terminal region of chorein;(source:Araport11) Ipc12G0011780 AT5G54730.1 homolog of yeast autophagy 18 (ATG18) F 0 yeast autophagy 18 F-like protein;(source:Araport11) Ipc12G0011790 AT2G44190.1 Family of unknown function (DUF566) Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo. ENDOSPERM DEFECTIVE protein (DUF566);(source:Araport11) Ipc12G0011800 AT3G20680.1 Domain of unknown function (DUF1995) 0 plant/protein (DUF1995);(source:Araport11) Ipc12G0011810 AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0011820 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc12G0011830 AT3G01440.1 PsbQ-like 1 Encodes a subunit of the NAD(P)H complex located in the chloroplast thylakoid lumen. PsbQ-like 1;(source:Araport11) Ipc12G0011840 AT5G54660.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc12G0011850 AT5G54650.2 formin homology5 Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene. formin homology5;(source:Araport11) Ipc12G0011860 AT4G27230.2 histone H2A 2 Encodes HTA2, a histone H2A protein. histone H2A 2;(source:Araport11) Ipc12G0011870 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc12G0011880 AT4G27250.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc12G0011890 AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc12G0011900 AT5G54590.4 0 Splice variant At5g54590.2 encodes CRLK1 (440-amino acid in length) calcium/calmodulin-regulated receptor-like kinase crucial for cold tolerance. CRLK1 is Primarily localized in the plasma membrane. Protein kinase superfamily protein;(source:Araport11) Ipc12G0011910 AT2G38152.1 alpha 1,4-glycosyltransferase family protein 0 alpha 1,4-glycosyltransferase family protein;(source:Araport11) Ipc12G0011920 AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein Encodes a sesterterpene synthase responsible for the biosynthesis of the tricyclic sesterterpene (+)-thalianatriene with a 11-6-5 fused ring system. Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc12G0011930 AT5G47360.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0011940 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc12G0011950 AT3G20660.1 organic cation/carnitine transporter4 0 organic cation/carnitine transporter4;(source:Araport11) Ipc12G0011960 AT4G36130.1 Ribosomal protein L2 family 0 Ribosomal protein L2 family;(source:Araport11) Ipc12G0011970 AT5G54570.1 beta glucosidase 41 0 beta glucosidase 41;(source:Araport11) Ipc12G0011980 AT5G54540.1 Uncharacterised conserved protein (UCP012943) 0 Uncharacterized conserved protein (UCP012943);(source:Araport11) Ipc12G0011990 AT3G62660.1 galacturonosyltransferase-like 7 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 7;(source:Araport11) Ipc12G0012000 AT5G54510.1 Auxin-responsive GH3 family protein Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). Auxin-responsive GH3 family protein;(source:Araport11) Ipc12G0012010 AT5G54520.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0012020 AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0012030 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc12G0012040 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc12G0012050 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc12G0012060 AT5G54470.1 B-box type zinc finger family protein 0 B-box type zinc finger family protein;(source:Araport11) Ipc12G0012070 AT1G11360.4 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc12G0012080 AT5G08240.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0012090 AT5G45540.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc12G0012100 AT1G11390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0012110 AT4G10265.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc12G0012120 AT4G33560.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc12G0012130 AT4G21450.1 PapD-like superfamily protein 0 PapD-like superfamily protein;(source:Araport11) Ipc12G0012140 AT5G54240.1 Protein of unknown function (DUF1223) 0 membrane lipoprotein lipid attachment site-like protein, putative (DUF1223);(source:Araport11) Ipc12G0012150 AT5G54250.4 0 member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. cyclic nucleotide-gated cation channel 4;(source:Araport11) Ipc12G0012160 AT5G54280.2 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc12G0012170 AT4G28590.1 0 0 polyadenylate-binding protein 2-binding protein;(source:Araport11) Ipc12G0012180 AT5G54290.1 cytochrome c biogenesis protein family Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen. cytochrome c biogenesis protein family;(source:Araport11) Ipc12G0012190 AT1G61260.1 Protein of unknown function (DUF761) 0 cotton fiber (DUF761);(source:Araport11) Ipc12G0012200 AT2G34480.2 0 Encodes a nuclear localized member of the ribosomal L18ae/LX protein family. Loss of function mutations show reduced transmission through the gametophytes and embryo lethality. Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc12G0012210 AT5G54370.1 Late embryogenesis abundant (LEA) protein-related 0 Late embryogenesis abundant (LEA) protein-like protein;(source:Araport11) Ipc12G0012220 AT5G54380.1 protein kinase family protein Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. protein kinase family protein;(source:Araport11) Ipc12G0012230 AT3G15534.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0012240 AT5G54390.1 HAL2-like Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. The mRNA is cell-to-cell mobile. HAL2-like protein;(source:Araport11) Ipc12G0012250 AT5G54400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0012260 AT3G15520.3 0 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc12G0012270 AT3G15518.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0012280 AT3G15510.1 NAC domain containing protein 2 Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2. NAC domain containing protein 2;(source:Araport11) Ipc12G0012290 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc12G0012300 AT4G27410.2 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes a NAC transcription factor induced in response to desiccation. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc12G0012310 AT3G16260.2 0 Encodes a tRNase Z.The mRNA is cell-to-cell mobile. tRNAse Z4;(source:Araport11) Ipc12G0012320 AT4G27420.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc12G0012330 AT4G27430.2 COP1-interacting protein 7 Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression. The mRNA is cell-to-cell mobile. COP1-interacting protein 7;(source:Araport11) Ipc12G0012340 AT3G15480.1 Protein of unknown function (DUF1218) 0 fiber (DUF1218);(source:Araport11) Ipc12G0012350 AT4G16760.1 acyl-CoA oxidase 1 Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate. acyl-CoA oxidase 1;(source:Araport11) Ipc12G0012360 AT4G17430.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc12G0012370 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc12G0012380 AT3G15470.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0012390 AT4G27450.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc12G0012400 AT5G53750.1 CBS domain-containing protein 0 CBS domain-containing protein;(source:Araport11) Ipc12G0012410 AT5G53760.2 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc12G0012420 AT3G15380.1 Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport, localizes to the trans-Golgi network, and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile, defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein;(source:Araport11) Ipc12G0012430 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0012440 AT1G15680.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc12G0012450 AT3G15370.1 expansin 12 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin 12;(source:Araport11) Ipc12G0012460 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc12G0012470 AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc12G0012480 AT4G21700.1 Protein of unknown function (DUF2921) 0 DUF2921 family protein, putative (DUF2921);(source:Araport11) Ipc12G0012490 AT1G53025.1 Ubiquitin-conjugating enzyme family protein 0 Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc11G0009190 AT2G39450.1 Cation efflux family protein Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn2+ and Cu2+ tolerance. Cation efflux family protein;(source:Araport11) Ipc11G0009180 AT3G12520.1 sulfate transporter 4;2 Encodes a sulfate transporter that in induced under sulfate limitation. sulfate transporter 4;(source:Araport11) Ipc11G0009170 AT3G05380.3 DIRP ;Myb-like DNA-binding domain 0 ALWAYS EARLY 2;(source:Araport11) Ipc11G0009160 AT2G33847.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0009150 AT2G39435.6 0 0 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11) Ipc11G0009140 AT2G39420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc11G0009130 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc11G0009120 AT3G55140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc11G0009110 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0009100 AT3G55120.1 Chalcone-flavanone isomerase family protein Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. Co-expressed with CHS. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc11G0009090 AT1G55350.6 0 Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm. calpain-type cysteine protease family;(source:Araport11) Ipc11G0009080 AT2G39350.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc11G0009070 AT1G28110.2 serine carboxypeptidase-like 45 0 serine carboxypeptidase-like 45;(source:Araport11) Ipc11G0009060 AT2G23030.1 SNF1-related protein kinase 2.9 encodes a member of SNF1-related protein kinases (SnRK2) SNF1-related protein kinase 2.9;(source:Araport11) Ipc11G0009050 AT5G13590.5 0 0 hypothetical protein;(source:Araport11) Ipc11G0009030 AT1G76320.3 0 0 FAR1-related sequence 4;(source:Araport11) Ipc11G0009040 #N/A #N/A #N/A #N/A Ipc11G0009020 AT1G01970.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0009010 AT5G17050.1 UDP-glucosyl transferase 78D2 The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. UDP-glucosyl transferase 78D2;(source:Araport11) Ipc11G0009000 AT1G54140.1 TATA binding protein associated factor 21kDa subunit putative TATA binding protein associated factor 21kDa TATA binding protein associated factor 21kDa subunit;(source:Araport11) Ipc11G0008990 AT3G04480.1 endoribonucleases 0 endoribonuclease;(source:Araport11) Ipc11G0008980 AT3G04490.2 0 0 exportin-4 protein;(source:Araport11) Ipc11G0008970 AT1G09770.1 cell division cycle 5 Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1. The mRNA is cell-to-cell mobile. cell division cycle 5;(source:Araport11) Ipc11G0008960 AT1G12740.1 cytochrome P450, family 87, subfamily A, polypeptide 2 encodes a protein with cytochrome P450 domain cytochrome P450, family 87, subfamily A, polypeptide 2;(source:Araport11) Ipc11G0008950 AT1G12740.1 cytochrome P450, family 87, subfamily A, polypeptide 2 encodes a protein with cytochrome P450 domain cytochrome P450, family 87, subfamily A, polypeptide 2;(source:Araport11) Ipc11G0008940 #N/A #N/A #N/A #N/A Ipc11G0008930 AT3G62150.3 0 Encodes a facultative transporter controlling auxin concentrations in plant cells. P-glycoprotein 21;(source:Araport11) Ipc11G0008920 #N/A #N/A #N/A #N/A Ipc11G0008910 AT3G04530.1 phosphoenolpyruvate carboxylase kinase 2 Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light and is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphoenolpyruvate carboxylase kinase 2;(source:Araport11) Ipc11G0008900 AT2G29400.1 type one protein phosphatase 1 Type 1 protein phosphatase, expressed in roots, rosettes and flowers type one protein phosphatase 1;(source:Araport11) Ipc11G0008890 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0008880 AT4G38500.1 Protein of unknown function (DUF616) 0 Sept9 (DUF616);(source:Araport11) Ipc11G0008870 AT1G54650.1 Methyltransferase family protein 0 Methyltransferase family protein;(source:Araport11) Ipc11G0008860 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0008850 AT3G04580.2 Signal transduction histidine kinase, hybrid-type, ethylene sensor Ethylene receptor, subfamily 2. Has serine kinase activity. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc11G0008840 AT2G38680.1 5'-nucleotidases;magnesium ion binding 0 5-nucleotidase / magnesium ion binding protein;(source:Araport11) Ipc11G0008830 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc11G0008820 AT5G58090.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc11G0008810 AT1G54560.2 0 Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc11G0008800 AT5G46850.1 0 0 phosphatidylinositol-glycan biosynthesis class X-like protein;(source:Araport11) Ipc11G0008790 AT2G37690.1 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative 0 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase;(source:Araport11) Ipc11G0008780 AT5G04870.1 calcium dependent protein kinase 1 A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. calcium dependent protein kinase 1;(source:Araport11) Ipc11G0008770 AT3G10650.2 0 Encodes a nucleoporin involved in mRNA export from the nucleus. It is also involved in the regulation of nuclear morphology. nuclear pore complex protein;(source:Araport11) Ipc11G0008760 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0008740 AT4G32605.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc11G0008730 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc11G0008720 AT4G32605.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc11G0008710 AT1G62260.1 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9;(source:Araport11) Ipc11G0008700 AT3G11760.1 0 0 structural maintenance of chromosomes flexible hinge domain protein;(source:Araport11) Ipc11G0008690 AT2G38680.1 5'-nucleotidases;magnesium ion binding 0 5-nucleotidase / magnesium ion binding protein;(source:Araport11) Ipc11G0008680 AT5G06470.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc11G0008670 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0008660 AT5G06490.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0008650 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc11G0008640 AT3G10620.1 nudix hydrolase homolog 26 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 26;(source:Araport11) Ipc11G0008630 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0008620 AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0008610 AT5G03540.1 exocyst subunit exo70 family protein A1 AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. It plays a central role in Casparian strip formation, generating a transient positional information that will be translated into a precisely localized cell wall modification. exocyst subunit exo70 family protein A1;(source:Araport11) Ipc11G0008600 AT5G04830.2 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc11G0008590 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc11G0008580 AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide which is essential during the early stages of embryo development and acts in the plastid nucleoids as the factor responsible of rps12 intron 1 trans-splicing and, indirectly, in the assembly of 70S ribosomes and plastid translation. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc11G0008570 AT5G04770.1 cationic amino acid transporter 6 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. cationic amino acid transporter 6;(source:Araport11) Ipc11G0008560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0008550 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0008540 AT5G04760.1 Duplicated homeodomain-like superfamily protein R-R-type MYB protein which plays negative roles in salt stress and is required for ABA signaling in Arabidopsis. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc11G0008530 AT1G62260.1 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9;(source:Araport11) Ipc11G0008520 AT1G62260.1 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9;(source:Araport11) Ipc11G0008510 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0008500 AT3G54300.3 0 Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal. vesicle-associated membrane protein 727;(source:Araport11) Ipc11G0008490 AT2G38710.4 0 0 AMMECR1 family;(source:Araport11) Ipc11G0008480 AT5G04750.1 F1F0-ATPase inhibitor protein, putative 0 F1F0-ATPase inhibitor protein;(source:Araport11) Ipc11G0008470 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0008460 AT1G60430.3 0 0 actin-related protein C3;(source:Araport11) Ipc11G0008450 AT3G11470.8 0 0 4-phosphopantetheinyl transferase superfamily;(source:Araport11) Ipc11G0008440 AT5G22450.3 0 0 spectrin beta chain, brain;(source:Araport11) Ipc11G0008430 AT3G54260.1 TRICHOME BIREFRINGENCE-LIKE 36 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 36;(source:Araport11) Ipc11G0008420 AT5G56090.1 cytochrome c oxidase 15 Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor. cytochrome c oxidase 15;(source:Araport11) Ipc11G0008410 AT1G68340.3 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc11G0008400 AT1G30240.2 0 0 proline-, glutamic acid/leucine-rich protein;(source:Araport11) Ipc11G0008390 AT3G54250.1 GHMP kinase family protein Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. GHMP kinase family protein;(source:Araport11) Ipc11G0008380 AT2G01830.5 0 Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane CHASE domain containing histidine kinase protein;(source:Araport11) Ipc11G0008370 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc11G0008360 AT5G46690.1 beta HLH protein 71 0 beta HLH protein 71;(source:Araport11) Ipc11G0008350 AT3G56160.3 0 0 Sodium Bile acid symporter family;(source:Araport11) Ipc11G0008340 AT3G02650.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0008330 AT2G36300.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc11G0008320 AT5G11720.1 Glycosyl hydrolases family 31 protein 0 Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc11G0008310 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc11G0008300 AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc11G0008290 AT5G11720.1 Glycosyl hydrolases family 31 protein 0 Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc11G0008280 AT5G11720.1 Glycosyl hydrolases family 31 protein 0 Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc11G0008270 AT3G10770.1 Single-stranded nucleic acid binding R3H protein 0 Single-stranded nucleic acid binding R3H protein;(source:Araport11) Ipc11G0008260 AT5G11720.1 Glycosyl hydrolases family 31 protein 0 Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc11G0008250 AT3G56590.2 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc11G0008240 AT5G42210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc11G0008230 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc11G0008220 AT4G13810.1 receptor like protein 47 0 receptor like protein 47;(source:Araport11) Ipc11G0008210 AT5G11860.5 0 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 5;(source:Araport11) Ipc11G0008200 AT3G20930.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a unique protein that is both a member of the RIP (RNA-editing interacting protein) family and the RNA recognition motif (RRM)-containing family. It controls the editing extent of 62% of the plastid Cs targeted for editing in Arabidopsis. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc11G0008190 AT2G27600.1 AAA-type ATPase family protein Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function. The mRNA is cell-to-cell mobile. AAA-type ATPase family protein;(source:Araport11) Ipc11G0008180 AT5G13320.2 0 Encodes an enzyme capable of conjugating amino acids to 4-substituted benzoates. 4-HBA (4-hydroxybenzoic acid) and pABA (4-aminobenzoate) may be targets of the enzyme in Arabidopsis, leading to the production of pABA-Glu, 4HBA-Glu, or other related compounds. This enzyme is involved in disease-resistance signaling. It is required for the accumulation of salicylic acid, activation of defense responses, and resistance to Pseudomonas syringae. Salicylic acid can decrease this enzyme Primes activity in vitro and may act as a competitive inhibitor. Expression of PBS3/GH3.12 can be detected in cotyledons, true leaves, hypocotyls, and occasionally in some parts of roots from 10-day-old seedlings. No expression has been detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants. Auxin-responsive GH3 family protein;(source:Araport11) Ipc11G0008170 AT3G56240.3 0 CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro. copper chaperone;(source:Araport11) Ipc11G0008160 AT3G44610.1 Protein kinase superfamily protein Kinase involved in the first positive phototropism and gravitropism. Phosphorylates serine residues in the cytoplasmic loop of PIN1 and shares phosphosite preferences with D6PK. Critical component for both hypocotyl phototropism and gravitropism, control tropic responses mainly through regulation of PIN-mediated auxin transport by protein phosphorylation. Protein kinase superfamily protein;(source:Araport11) Ipc11G0008150 AT2G36380.1 pleiotropic drug resistance 6 0 pleiotropic drug resistance 6;(source:Araport11) Ipc11G0008140 AT1G80370.1 Cyclin A2;4 Encodes a A2-type cyclin. Contributes to the fine-tuning of local proliferation during plant development. Cyclin A2;(source:Araport11) Ipc11G0008130 AT3G61110.1 ribosomal protein S27 Arabidopsis ribosomal protein ribosomal protein S27;(source:Araport11) Ipc11G0008120 AT4G09920.4 0 0 FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc11G0008110 AT1G49920.2 0 0 MuDR family transposase;(source:Araport11) Ipc11G0008100 AT3G52900.1 Family of unknown function (DUF662) 0 RAB6-interacting golgin (DUF662);(source:Araport11) Ipc11G0008090 AT3G61110.1 ribosomal protein S27 Arabidopsis ribosomal protein ribosomal protein S27;(source:Araport11) Ipc11G0008080 AT3G48310.1 cytochrome P450, family 71, subfamily A, polypeptide 22 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 22;(source:Araport11) Ipc11G0008070 AT3G52240.1 0 0 transcriptional regulator ATRX;(source:Araport11) Ipc11G0008060 AT2G35000.1 RING/U-box superfamily protein ATL9 is an E3 ligase-like protein that is induced by chitin oligomers and contributes to fungal resistance.It differs from other members of the ATL family in that it has a PEST domain. It is a short lived protein that is subject to proteosome mediated degradation. It is expressed in many aerial tissues in a pattern that varies with developmental stage. RING/U-box superfamily protein;(source:Araport11) Ipc11G0008050 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0008040 AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc11G0008030 AT5G04560.3 0 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. HhH-GPD base excision DNA repair family protein;(source:Araport11) Ipc11G0008020 AT5G42010.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0008010 AT3G57810.4 0 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc11G0008000 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc11G0007990 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc11G0007980 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc11G0007970 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc11G0007960 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc11G0007950 AT3G59000.2 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc11G0007940 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0007920 AT1G13570.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc11G0007910 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc11G0007900 AT2G28600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0007890 AT1G30890.2 Integral membrane HRF1 family protein 0 Integral membrane HRF1 family protein;(source:Araport11) Ipc11G0007880 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0007870 AT5G04550.2 0 0 type-1 restriction enzyme mjaxp r protein (DUF668);(source:Araport11) Ipc11G0007860 AT1G76320.4 0 0 FAR1-related sequence 4;(source:Araport11) Ipc11G0007850 AT3G52200.1 Dihydrolipoamide acetyltransferase, long form protein Encodes a dihydrolipoamide S-acetyltransferase, a subunit of the mitochondrial pyruvate dehydrogenase complex. Dihydrolipoamide acetyltransferase, long form protein;(source:Araport11) Ipc11G0007840 AT4G24350.1 Phosphorylase superfamily protein 0 Phosphorylase superfamily protein;(source:Araport11) Ipc11G0007830 AT3G10540.1 3-phosphoinositide-dependent protein kinase 0 3-phosphoinositide-dependent protein kinase;(source:Araport11) Ipc11G0007820 AT2G41740.2 0 Encodes a protein with high homology to animal villin. villin 2;(source:Araport11) Ipc11G0007810 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc11G0007800 AT5G55540.1 tornado 1 Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. tornado 1;(source:Araport11) Ipc11G0007790 AT2G25320.2 0 0 TRAF-like family protein;(source:Araport11) Ipc11G0007780 AT4G23020.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0007770 AT2G05830.1 NagB/RpiA/CoA transferase-like superfamily protein Encodes a 5-methylthioribose-1-phosphate isomerase. NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc11G0007760 #N/A #N/A #N/A #N/A Ipc11G0007750 AT2G05840.1 20S proteasome subunit PAA2 Encodes 20S proteasome subunit PAA2 (PAA2). 20S proteasome subunit PAA2;(source:Araport11) Ipc11G0007740 AT2G02700.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc11G0007730 AT1G65810.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0007720 AT5G20635.1 0 Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development. guanine nucleotide-binding protein subunit gamma;(source:Araport11) Ipc11G0007710 AT2G05920.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc11G0007700 AT1G55000.3 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc11G0007690 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0007680 AT5G20570.1 RING-box 1 Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. RING-box 1;(source:Araport11) Ipc11G0007670 AT3G55820.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc11G0007660 AT3G45310.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc11G0007650 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0007640 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0007630 AT1G64870.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0007620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007610 AT1G19800.6 0 Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. trigalactosyldiacylglycerol 1;(source:Araport11) Ipc11G0007600 #N/A #N/A #N/A #N/A Ipc11G0007590 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0007580 AT1G04160.2 0 Encodes a member of the type XI myosin protein family involved in root hair elongation. myosin XI B;(source:Araport11) Ipc11G0007570 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0007560 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc11G0007550 AT2G30360.1 SOS3-interacting protein 4 Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter. SOS3-interacting protein 4;(source:Araport11) Ipc11G0007540 AT5G56930.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc11G0007530 AT3G43850.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0007520 AT1G64870.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0007510 AT4G11110.1 SPA1-related 2 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. SPA1-related 2;(source:Araport11) Ipc11G0007500 AT3G42725.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc11G0007490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007480 AT2G23140.4 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc11G0007470 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007460 AT5G35570.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0007450 AT5G45550.1 Mob1/phocein family protein Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling. Mob1/phocein family protein;(source:Araport11) Ipc11G0007440 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0007430 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007420 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0007410 AT1G64370.1 0 0 filaggrin-like protein;(source:Araport11) Ipc11G0007400 #N/A #N/A #N/A #N/A Ipc11G0007390 AT5G20630.1 germin 3 Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation. germin 3;(source:Araport11) Ipc11G0007380 AT5G20630.1 germin 3 Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation. germin 3;(source:Araport11) Ipc03G0025080 AT4G09830.1 Uncharacterised conserved protein UCP009193 0 nuclear receptor family 2 group C protein;(source:Araport11) Ipc03G0025070 AT4G09830.1 Uncharacterised conserved protein UCP009193 0 nuclear receptor family 2 group C protein;(source:Araport11) Ipc03G0025060 AT4G39370.1 ubiquitin-specific protease 27 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 27;(source:Araport11) Ipc03G0025050 AT1G72270.1 0 Encodes IDAP1. Acts together with IDAP2 and IDM1 to regulate active DNA demethylation. nucleolar pre-ribosomal-associated protein;(source:Araport11) Ipc03G0025040 AT5G57120.2 0 0 nucleolar/coiled-body phosphoprotein;(source:Araport11) Ipc03G0025030 AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5) Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects. 26S proteasome regulatory subunit, putative (RPN5);(source:Araport11) Ipc03G0025020 AT5G64750.1 Integrase-type DNA-binding superfamily protein Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response. The mRNA is cell-to-cell mobile. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0025010 AT2G21790.1 ribonucleotide reductase 1 encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair ribonucleotide reductase 1;(source:Araport11) Ipc03G0025000 AT1G43130.1 like COV 2 0 like COV 2;(source:Araport11) Ipc03G0024990 AT4G19191.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0024980 AT5G09850.5 0 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc03G0024970 AT5G64740.1 cellulose synthase 6 Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The mRNA is cell-to-cell mobile. cellulose synthase 6;(source:Araport11) Ipc03G0024960 AT1G17910.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc03G0024950 AT1G66400.1 calmodulin like 23 Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23;(source:Araport11) Ipc03G0024940 AT5G64700.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0024930 AT5G14970.1 0 0 seed maturation-like protein;(source:Araport11) Ipc03G0024920 AT2G41680.1 NADPH-dependent thioredoxin reductase C Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage. NADPH-dependent thioredoxin reductase C;(source:Araport11) Ipc03G0024910 #N/A #N/A #N/A #N/A Ipc03G0024900 AT2G18465.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc03G0024890 AT3G01540.1 DEAD box RNA helicase 1 RNA HELICASE DRH1 DEAD box RNA helicase 1;(source:Araport11) Ipc03G0024870 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0024880 AT2G24540.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc03G0024860 AT2G29620.6 0 0 dentin sialophosphoprotein;(source:Araport11) Ipc03G0024850 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0024840 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0024830 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc03G0024820 AT5G43870.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc03G0024810 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0024800 AT5G09830.1 BolA-like family protein Encodes a cytosolic BolA protein. Plays a repressive role in the tolerance against excess iron and methyl viologen-induced oxidative stress. BolA-like family protein;(source:Araport11) Ipc03G0024790 AT1G68170.2 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0024780 AT3G27740.1 carbamoyl phosphate synthetase A Encodes carbamoyl phosphate synthetase (CPS) small subunit (carA), also named as VEN6. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins. carbamoyl phosphate synthetase A;(source:Araport11) Ipc03G0024770 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc03G0024760 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0024750 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc03G0024740 AT5G09810.1 actin 7 Member of Actin gene family.Mutants are defective in germination and root growth. The mRNA is cell-to-cell mobile. actin 7;(source:Araport11) Ipc03G0024730 AT5G64880.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0024720 AT2G22010.1 related to KPC1 Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein. related to KPC1;(source:Araport11) Ipc03G0024710 AT1G69420.2 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc03G0024700 AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Encodes one of the subunits of the head domain of the MEDIATOR complex. The complex conveys transcriptional signals by acting as an intermediary between transcription factors and RNA polymerase II. Together with MED18, MED20 is proposed to control the balance of salicylic acid and jasmonate associated defense pathways. It is involved in miRNA biogenesis by recruiting Pol II to promoters of miRNA genes. TATA-binding related factor (TRF) of subunit 20 of Mediator complex;(source:Araport11) Ipc03G0024690 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0024680 AT5G24510.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc03G0024670 AT5G10020.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc03G0024660 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0024650 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0024640 AT5G12210.1 RAB geranylgeranyl transferase beta subunit 1 0 RAB geranylgeranyl transferase beta subunit 1;(source:Araport11) Ipc03G0024630 AT3G03305.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc03G0024620 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0024610 AT3G12070.4 0 0 RAB geranylgeranyl transferase beta subunit 2;(source:Araport11) Ipc03G0024600 #N/A #N/A #N/A #N/A Ipc03G0024590 AT2G41720.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein that is essential for trans-splicing of a chloroplast small ribosomal subunit transcript. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0024580 AT4G39620.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0024570 AT5G65210.7 0 Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated. bZIP transcription factor family protein;(source:Araport11) Ipc03G0024560 AT2G41060.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0024550 AT5G67340.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0024540 AT5G65205.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0024530 AT5G10050.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0024520 AT4G39680.2 SAP domain-containing protein 0 SAP domain-containing protein;(source:Araport11) Ipc03G0024510 AT5G10070.2 RNase L inhibitor protein-related 0 RNase L inhibitor protein-like protein;(source:Araport11) Ipc03G0024500 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0024490 AT2G46310.1 cytokinin response factor 5 CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves. cytokinin response factor 5;(source:Araport11) Ipc03G0024480 AT2G22125.1 binding Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment. The mRNA is cell-to-cell mobile. binding protein;(source:Araport11) Ipc03G0024470 AT5G01090.1 Concanavalin A-like lectin family protein 0 Concanavalin A-like lectin family protein;(source:Araport11) Ipc03G0024460 AT4G39830.1 Cupredoxin superfamily protein role in the degradation of ascorbate to (mono)dehydroascorbate Cupredoxin superfamily protein;(source:Araport11) Ipc03G0024450 AT4G39820.2 0 Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0024440 AT2G22250.1 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) Ipc03G0024430 AT2G22250.1 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) Ipc03G0024420 AT4G39810.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0024410 AT1G50030.1 target of rapamycin Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems. target of rapamycin;(source:Araport11) Ipc03G0024400 AT5G57260.1 cytochrome P450, family 71, subfamily B, polypeptide 10 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 10;(source:Araport11) Ipc03G0024390 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc03G0024380 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0024370 AT1G22160.1 Protein of unknown function (DUF581) 0 senescence-associated family protein (DUF581);(source:Araport11) Ipc03G0024360 AT5G41220.2 0 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 3;(source:Araport11) Ipc03G0024350 AT5G10150.1 Domain of unknown function (DUF966) SOK2 is a DUF966 domain containing protein of unknown function. Expressed in discrete domains of the PM. In root endodermis and embryo, expression is in inner basal edges and in basal UPSTREAM OF FLC protein (DUF966);(source:Araport11) Ipc03G0024340 AT5G40820.2 0 Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al. Ataxia telangiectasia-mutated and RAD3-like protein;(source:Araport11) Ipc03G0024330 AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein Encodes a protein, expressed in leaves, with similarity to pollen allergens. The mRNA is cell-to-cell mobile. Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc03G0024320 AT1G64260.2 0 0 MuDR family transposase;(source:Araport11) Ipc03G0024300 AT1G22170.2 0 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc03G0024310 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0024290 AT5G65090.3 0 Encodes a protein involved in root hair morphogenesis and tip growth. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but, apparently, is not required for normal subsequent tip growth. DNAse I-like superfamily protein;(source:Araport11) Ipc03G0024230 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024240 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024250 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024260 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024270 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024280 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc03G0024220 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc03G0024210 AT1G26630.2 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection. The mRNA is cell-to-cell mobile. Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein;(source:Araport11) Ipc03G0024200 AT4G39790.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP transcription factor, putative (DUF630 and DUF632);(source:Araport11) Ipc03G0024190 AT5G65110.1 acyl-CoA oxidase 2 Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. acyl-CoA oxidase 2;(source:Araport11) Ipc03G0024180 AT4G39780.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0024170 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc03G0024160 AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0024150 AT2G22180.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0024140 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0024130 AT4G36945.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc03G0024120 AT2G23420.1 nicotinate phosphoribosyltransferase 2 0 nicotinate phosphoribosyltransferase 2;(source:Araport11) Ipc03G0024110 AT2G06570.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0024100 AT5G67140.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc03G0024090 AT5G67130.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc03G0024080 AT5G67170.2 SEC-C motif-containing protein / OTU-like cysteine protease family protein 0 SEC-C motif-containing protein / OTU-like cysteine protease family protein;(source:Araport11) Ipc03G0024070 AT4G36920.2 Integrase-type DNA-binding superfamily protein Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0024060 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0024050 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc03G0024040 AT4G36910.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc03G0024030 AT2G23340.1 DREB and EAR motif protein 3 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 3;(source:Araport11) Ipc03G0024020 AT5G67210.1 Protein of unknown function (DUF579) Encode a DUF579 (domain of unknown function 579) containing protein essential for normal xylan synthesis and deposition in the secondary cell wall. IRREGULAR XYLEM protein (DUF579);(source:Araport11) Ipc03G0024010 AT4G24240.1 WRKY DNA-binding protein 7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. WRKY DNA-binding protein 7;(source:Araport11) Ipc03G0024000 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0023990 AT5G67230.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc03G0023980 AT1G47128.1 Granulin repeat cysteine protease family protein cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc03G0023970 AT4G39220.2 0 Key player of retrieval of ER membrane proteins Rer1 family protein;(source:Araport11) Ipc03G0023960 AT4G37250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0023950 AT5G67290.1 FAD-dependent oxidoreductase family protein 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc03G0023940 AT5G67290.1 FAD-dependent oxidoreductase family protein 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc03G0023930 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc03G0023920 AT4G37270.1 heavy metal atpase 1 Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions. heavy metal atpase 1;(source:Araport11) Ipc03G0023910 AT4G37280.1 MRG family protein 0 MRG family protein;(source:Araport11) Ipc03G0023900 AT2G02660.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0023890 AT5G24010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0023880 AT5G24010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0023870 AT5G43230.1 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc03G0023860 AT4G37360.1 cytochrome P450, family 81, subfamily D, polypeptide 2 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 2;(source:Araport11) Ipc03G0023850 AT4G37360.1 cytochrome P450, family 81, subfamily D, polypeptide 2 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 2;(source:Araport11) Ipc03G0023840 AT2G15000.1 0 0 caspase-6 protein;(source:Araport11) Ipc03G0023830 AT2G14960.1 Auxin-responsive GH3 family protein encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin. Auxin-responsive GH3 family protein;(source:Araport11) Ipc03G0023820 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0023810 AT4G24204.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0023800 AT2G23150.1 natural resistance-associated macrophage protein 3 Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. natural resistance-associated macrophage protein 3;(source:Araport11) Ipc03G0023790 AT4G34280.1 transducin family protein / WD-40 repeat family protein Encodes a putative substrate receptor for the cullin4-RING ubiquitin E3 ligase complex that is involved in negative regulation of plant UV-B response. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0023780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0023770 AT4G37450.2 0 AGP18 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP17 and AGP19, other lysine-rich AGPs. It is expressed in young leaves, shoots, roots and flowers and is active in the regulation of the selection and survival of megaspores. arabinogalactan protein 18;(source:Araport11) Ipc03G0023760 AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain. PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc03G0023750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0023740 AT4G37470.1 alpha/beta-Hydrolases superfamily protein HTL belonging to the alpha/beta fold hydrolase superfamily. Mutant and over-expression studies indicates its involvement in seedling de-etiolation process. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0023730 AT4G33920.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc03G0023720 AT5G67350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0023710 AT2G33690.1 Late embryogenesis abundant protein, group 6 0 Late embryogenesis abundant protein, group 6;(source:Araport11) Ipc03G0023700 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc03G0023690 AT2G23090.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc03G0023680 AT5G67380.1 casein kinase alpha 1 Casein kinase II (CK2) catalytic subunit (alpha 1). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis. casein kinase alpha 1;(source:Araport11) Ipc03G0023670 AT5G67390.3 0 0 glycosyltransferase-like protein;(source:Araport11) Ipc03G0023660 AT3G49950.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc03G0023650 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0023640 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc03G0023630 AT5G67420.2 0 Encodes a LOB-domain protein involved in nitrogen metabolism and affecting leaf morphogenesis. LOB domain-containing protein 37;(source:Araport11) Ipc03G0023620 AT4G37560.1 Acetamidase/Formamidase family protein 0 Acetamidase/Formamidase family protein;(source:Araport11) Ipc03G0023610 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0023600 AT3G18520.2 histone deacetylase 15 Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. histone deacetylase 15;(source:Araport11) Ipc03G0023590 AT2G23070.1 Protein kinase superfamily protein Encodes a chloroplast localized subunit of casien kinase4. Functions reduntantly with other alpha subunits (1, 2,and 3) in ABA mediated suppression of seed germination, lateral root development and flowering time. Protein kinase superfamily protein;(source:Araport11) Ipc03G0023580 AT2G14820.2 0 A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc03G0023570 AT5G67460.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc03G0023560 AT5G67470.1 formin homolog 6 0 formin homolog 6;(source:Araport11) Ipc03G0023550 AT5G67480.3 0 BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. BTB and TAZ domain protein 4;(source:Araport11) Ipc03G0023540 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0023530 AT4G37630.1 cyclin d5;1 core cell cycle genes; a quantitative trait gene for endoreduplication. cyclin d5;(source:Araport11) Ipc03G0023520 AT1G64960.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0023510 AT4G37640.1 calcium ATPase 2 Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor. calcium ATPase 2;(source:Araport11) Ipc03G0023500 AT5G17380.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc03G0023490 AT2G14750.1 APS kinase Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability. The mRNA is cell-to-cell mobile. APS kinase;(source:Araport11) Ipc03G0023480 AT3G49890.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0023470 AT5G67530.1 plant U-box 49 0 plant U-box 49;(source:Araport11) Ipc03G0023460 AT4G37650.1 GRAS family transcription factor Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT-ROOT forms a network in combination with JACKDAW, BLUEJAY AND SCARECROW to regulate tissue patterning through asymmetric cell division. The ground tissue lineage remains in shortroot mutant, while it is progressively lost in the triple mutant bluejay jackdaw scarecrow and double mutant jackdaw scarecrow. In addition, ground tissue basal identity remains in shortroot mutant while it is defective in the quadruple mutant bluejay jackdaw magpie nutcracker. GRAS family transcription factor;(source:Araport11) Ipc03G0023450 AT3G49880.1 glycosyl hydrolase family protein 43 0 glycosyl hydrolase family protein 43;(source:Araport11) Ipc03G0023440 AT5G67550.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0023430 AT3G49870.1 ADP-ribosylation factor-like A1C A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. ADP-ribosylation factor-like A1C;(source:Araport11) Ipc03G0023420 AT5G67570.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0023410 AT4G37660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein 0 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11) Ipc03G0023400 AT5G67580.2 Homeodomain-like/winged-helix DNA-binding family protein Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc03G0023390 AT5G67590.1 NADH-ubiquinone oxidoreductase-related Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain. The mRNA is cell-to-cell mobile. NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc03G0023380 AT2G22910.1 N-acetyl-l-glutamate synthase 1 0 N-acetyl-l-glutamate synthase 1;(source:Araport11) Ipc03G0023370 AT5G67610.1 Uncharacterized conserved protein (DUF2215) Encodes an orthlog of the Xenopus inner nuclear membrane (INM) protein Nemp1/TMEM194A. transmembrane protein (DUF2215);(source:Araport11) Ipc03G0023360 AT1G70210.1 CYCLIN D1;1 Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination. CYCLIN D1;(source:Araport11) Ipc03G0023350 AT4G37680.4 0 heptahelical transmembrane protein HHP4 heptahelical protein 4;(source:Araport11) Ipc03G0023340 AT2G22900.1 Galactosyl transferase GMA12/MNN10 family protein Encodes MUCI10, a galactomannan-1,6-galactosyltransferase. MUCI10 likely decorates glucomannan, synthesized by CSLA2, with galactose residues in vivo. The degree of galactosylation is essential for the synthesis of the GGM backbone, the structure of cellulose, mucilage density, as well as the adherence of pectin. Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc03G0023330 AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0023320 AT3G49810.1 ARM repeat superfamily protein Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination. ARM repeat superfamily protein;(source:Araport11) Ipc03G0023310 AT2G22880.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc03G0023300 AT3G49800.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc03G0023290 AT5G65890.3 0 Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques. ACT domain repeat 1;(source:Araport11) Ipc03G0023280 AT2G22850.2 basic leucine-zipper 6 0 basic leucine-zipper 6;(source:Araport11) Ipc03G0023270 AT3G55280.3 ribosomal protein L23AB 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA. ribosomal protein L23AB;(source:Araport11) Ipc03G0023260 AT1G22680.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0023250 AT2G22840.1 growth-regulating factor 1 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1;(source:Araport11) Ipc03G0023240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0023230 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0023220 AT3G49750.1 receptor like protein 44 0 receptor like protein 44;(source:Araport11) Ipc03G0023210 AT5G39990.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14A, a beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan. The protein was localized to the Golgi apparatus when transiently expressed in Nicotiana benthamiana. Plays a role in cell elongation during seedling growth. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0023200 AT3G49725.1 GTP-binding protein, HflX 0 GTP-binding protein, HflX;(source:Araport11) Ipc03G0023190 AT5G65810.1 0 Encodes CGR3 (cotton Golgi-related 3). CGR3 and a close homologue CGR2 have overlapping roles in pectin methylesterification and plant growth. transmembrane protein;(source:Araport11) Ipc03G0023170 AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0023180 AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0023160 AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0023150 AT4G37770.1 1-amino-cyclopropane-1-carboxylate synthase 8 Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8;(source:Araport11) Ipc03G0023140 AT5G65780.1 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) Encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant. Note that the AT5G65780.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support. The mRNA is cell-to-cell mobile. branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);(source:Araport11) Ipc03G0023130 AT5G65760.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc04G0006370 AT1G31880.1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with PAX, thereby timing PPSE differentiation. Dampens PIN-mediated auxin efflux. DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein;(source:Araport11) Ipc04G0006380 AT4G19110.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0006390 AT1G11940.2 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc04G0006400 AT4G05440.1 temperature sensing protein-related Plays a role in pollen development and modulating DNA replication via interaction with MCM4 and MCM7 of the pre-replication complex. temperature sensing protein-like protein;(source:Araport11) Ipc04G0006410 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0006420 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0006430 AT4G19420.3 0 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006440 AT1G04300.5 0 Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc04G0006450 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006460 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006470 AT3G16555.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0006480 AT1G21090.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc04G0006490 AT3G49800.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc04G0006500 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006510 AT5G45280.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006520 AT5G45280.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006530 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006540 AT5G22690.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc04G0006550 AT1G74480.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc04G0006560 AT1G21770.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0006570 AT2G34470.1 urease accessory protein G Encodes a urease accessory protein which is essential for the activation of plant urease. urease accessory protein G;(source:Araport11) Ipc04G0006580 AT4G30810.1 serine carboxypeptidase-like 29 0 serine carboxypeptidase-like 29;(source:Araport11) Ipc04G0006590 AT2G43670.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc04G0006600 AT2G39030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Encodes a protein that acts as an ornithine N-delta-acetyltransferase, leading to the formation of N-delta-actetylornithine. This compound is likely used in plant defense and levels of it are increased in Arabidopsis plants in response to MeJA and ABA. The mRNA is cell-to-cell mobile. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0006610 AT4G18170.1 WRKY DNA-binding protein 28 Member of WRKY Transcription Factor; Group II-c. Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3. In the ovule, it is expressed in hypodermal somatic cells and appears to play a role in supression of megasporocyte cell fate. WRKY DNA-binding protein 28;(source:Araport11) Ipc04G0006620 AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6 Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK3 is found in the thylakoid stromal lamellae. May form homomeric ion channels in vivo. It modulates the partitioning of the proton motive force (pmf) between the delta psi and delta pH in chloroplasts in vivo at physiological light intensities. Ca2+ activated outward rectifying K+ channel 6;(source:Araport11) Ipc04G0006630 AT1G29850.1 double-stranded DNA-binding family protein Encodes a protein that by its interaction with HAM acetyltransferases plays an important role during DNA damage responses induced by UV-B radiation and participates in programmed cell death programs. double-stranded DNA-binding family protein;(source:Araport11) Ipc04G0006640 AT1G60970.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc04G0006650 AT1G29350.1 Kinase-related protein of unknown function (DUF1296) 0 RNA polymerase II degradation factor-like protein (DUF1296);(source:Araport11) Ipc04G0006660 AT5G46390.2 Peptidase S41 family protein 0 Peptidase S41 family protein;(source:Araport11) Ipc04G0006670 AT2G39930.2 0 Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex. isoamylase 1;(source:Araport11) Ipc04G0006680 AT1G29390.1 cold regulated 314 thylakoid membrane 2 Integral membrane protein in the inner envelope of chloroplasts. Provide freezing tolerance. cold regulated 314 thylakoid membrane 2;(source:Araport11) Ipc04G0006690 AT5G46400.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0006700 AT4G18950.1 Integrin-linked protein kinase family BHP1 is a Raf-like protein kinase involved in mediating blue light dependent stomatal opening. Integrin-linked protein kinase family;(source:Araport11) Ipc04G0006710 AT1G29670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0006720 AT3G22170.2 far-red elongated hypocotyls 3 A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. far-red elongated hypocotyls 3;(source:Araport11) Ipc04G0006730 AT1G29670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0006740 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0006750 AT3G14770.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc04G0006760 AT5G14270.3 0 Bromodomain protein that functions as a negative regulator of sugar and ABA signaling. bromodomain and extraterminal domain protein 9;(source:Araport11) Ipc04G0006770 AT4G18050.1 P-glycoprotein 9 0 P-glycoprotein 9;(source:Araport11) Ipc04G0006780 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc04G0006790 #N/A #N/A #N/A #N/A Ipc04G0006800 AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein 0 RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11) Ipc04G0006810 AT5G45690.1 Protein of unknown function (DUF1264) 0 histone acetyltransferase (DUF1264);(source:Araport11) Ipc04G0006820 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0006830 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0006840 AT4G38495.1 0 0 chromatin-remodeling complex subunit;(source:Araport11) Ipc04G0006850 AT1G53430.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006860 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006870 AT1G53430.2 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006880 AT1G53420.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006890 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006900 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006910 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0006920 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0006940 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc04G0006930 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0006950 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc04G0006960 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc04G0006970 #N/A #N/A #N/A #N/A Ipc04G0006980 AT1G10680.2 0 0 P-glycoprotein 10;(source:Araport11) Ipc04G0006990 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007000 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007010 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007020 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007030 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007040 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc04G0007050 AT1G07650.4 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007060 AT1G07650.4 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007070 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007080 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007090 AT5G49780.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0007100 AT3G48520.1 cytochrome P450, family 94, subfamily B, polypeptide 3 CYP94B3 is a jasmonoyl-isoleucine-12-hydroxylase that catalyzes the formation of 12-OH-JA-Ile from JA-Ile. By reducing the levels of this the biologically active phytohormone, CYP94B3 attenuates the jasmonic acid signaling cascade. CYP94B3 transcript levels rise in response to wounding. cytochrome P450, family 94, subfamily B, polypeptide 3;(source:Araport11) Ipc04G0007110 AT1G07650.3 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007120 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007130 AT1G07650.4 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007140 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007150 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0007160 AT1G29760.1 Putative adipose-regulatory protein (Seipin) Membrane protein involved in lipid droplet biogenesis primarily in pollen. Putative adipose-regulatory protein (Seipin);(source:Araport11) Ipc04G0007170 AT4G18910.1 NOD26-like intrinsic protein 1;2 Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells. NOD26-like intrinsic protein 1;(source:Araport11) Ipc04G0007190 AT4G18880.1 heat shock transcription factor A4A Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses. heat shock transcription factor A4A;(source:Araport11) Ipc04G0007180 AT1G26260.5 0 Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1. cryptochrome-interacting basic-helix-loop-helix 5;(source:Araport11) Ipc04G0007200 AT4G18800.1 RAB GTPase homolog A1D Encodes RabA1d, a member of the RabA subfamily of small Rab GTPases. RAB GTPase homolog A1D;(source:Araport11) Ipc04G0007210 AT1G29270.1 0 0 transcription factor bHLH35-like protein;(source:Araport11) Ipc04G0007220 AT2G42760.1 0 0 DUF1685 family protein;(source:Araport11) Ipc04G0007230 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0007240 AT1G06250.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0007250 AT3G14067.1 Subtilase family protein Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility. Subtilase family protein;(source:Araport11) Ipc04G0007260 AT4G18550.2 0 DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0007270 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc04G0007280 AT4G18780.1 cellulose synthase family protein Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. cellulose synthase family protein;(source:Araport11) Ipc04G0007290 AT5G45760.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0007300 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0007310 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0007320 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0007330 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0007340 AT2G34190.1 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc04G0007350 AT2G38300.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc04G0007360 AT1G29240.1 Protein of unknown function (DUF688) 0 transcription initiation factor TFIID subunit, putative (DUF688);(source:Araport11) Ipc04G0007370 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc04G0007380 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc04G0007390 AT1G20850.1 xylem cysteine peptidase 2 Cysteine peptidase. Enzyme activity detected in leaf. xylem cysteine peptidase 2;(source:Araport11) Ipc04G0007400 AT1G09850.1 xylem bark cysteine peptidase 3 Arabidopsis thaliana papain-like cysteine peptidase xylem bark cysteine peptidase 3;(source:Araport11) Ipc04G0007410 AT3G58640.2 Mitogen activated protein kinase kinase kinase-related 0 Mitogen activated protein kinase kinase kinase-like protein;(source:Araport11) Ipc04G0007420 AT1G29260.1 peroxin 7 Encodes the peroxisomal targeting signal type 2 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS2 consensus sequence (RLX5HL or a variant) within the first 30 or so amino acids. RNAi experiments suggest that PEX7 is necessary for the maintenance of glyoxysomal but not leaf peroxisomal function. The mRNA is cell-to-cell mobile. peroxin 7;(source:Araport11) Ipc04G0007430 AT3G58630.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc04G0007440 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc04G0007450 AT2G42590.2 general regulatory factor 9 14-3-3 gene. Binds calcium and displays induced structural changes. general regulatory factor 9;(source:Araport11) Ipc04G0007460 AT1G29120.8 0 0 Hydrolase-like protein family;(source:Araport11) Ipc04G0007470 AT4G18593.2 0 0 dual specificity protein phosphatase-like protein;(source:Araport11) Ipc04G0007480 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0007490 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc04G0007500 AT5G61300.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0007510 AT3G15010.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0007520 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc04G0007530 AT4G18550.2 0 DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0007540 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0007550 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0007560 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0007570 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0007580 AT2G25300.1 Galactosyltransferase family protein Encodes a hydroxyproline O-galactosyltransferase. Galactosyltransferase family protein;(source:Araport11) Ipc04G0007590 AT4G18480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0007600 AT1G28960.5 nudix hydrolase homolog 15 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 15;(source:Araport11) Ipc04G0007610 AT2G31070.1 TCP domain protein 10 TCP family protein involved in heterchronic regulation of leaf differentiation. TCP domain protein 10;(source:Araport11) Ipc04G0007620 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc04G0007630 AT4G18465.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc04G0007640 AT2G34040.3 0 0 Apoptosis inhibitory protein 5 (API5);(source:Araport11) Ipc04G0007650 AT3G50760.1 galacturonosyltransferase-like 2 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase-like 2;(source:Araport11) Ipc04G0007660 AT2G34050.1 0 0 ATP synthase F1 complex assembly factor;(source:Araport11) Ipc04G0007670 AT4G18470.1 negative regulator of systemic acquired resistance (SNI1) Negative regulator of systemic acquired resistance (SAR), repressor of pathogenesis-related PR gene expression which is removed by NPR1 upon induction of SAR. Encodes leucine-rich nuclear protein. Conserved in plants, with putative orthologs found in several plant species. Many NPR1-dependent PR gene are specifically derepressed in the sni1 mutant. The structural similarity of SNI1 to Armadillo repeat proteins implies that SNI1 may form a scaffold for interaction with proteins that modulate transcription. Histone modification may be involved in SNI1-mediated repression of PR genes.SNI1 is the NSE6 subunit of the SMC5/6 complex. It can interact with and inhibit E2F transcription factors. negative regulator of systemic acquired resistance (SNI1);(source:Araport11) Ipc04G0007680 AT5G45960.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0007690 AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein 0 mitochondrial ribosomal protein L51/S25/CI-B8 family protein;(source:Araport11) Ipc04G0007700 AT5G47220.1 ethylene responsive element binding factor 2 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2;(source:Araport11) Ipc04G0007710 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc04G0007720 AT5G46020.1 0 MUSE7 was identified in a forward genetic screen to identify snc1 enhancers using a mos4 snc1 background. muse7 mos4 snc1 plants are morphologiclly similar to snc1 plants with slightly twisted leaves. The triple mutant also shows PR gene activation and enhanced resistance to pathogens, like the snc1 single mutant. It is a single copy gene conserved in plants and metazoans.MUSE7 encodes an evolutionarily conserved putative kinase substrate of unknown function that affects the accumulation of NLR proteins. 28 kDa heat/acid-stable phosphoprotein-like protein;(source:Araport11) Ipc04G0007730 AT1G28530.2 0 Encodes a protein that localizes to both chloroplasts and amyloplasts and is required for both chloroplast and mesophyll development. deneddylase;(source:Araport11) Ipc04G0007740 AT1G28520.5 0 VOZ transcription factor which acts as positive regulator of several salt-responsive genes. Functionally redundant in salt stress with VOZ2. vascular plant one zinc finger protein;(source:Araport11) Ipc04G0007750 AT1G28510.1 Optic atrophy 3 protein (OPA3) 0 Optic atrophy 3 protein (OPA3);(source:Araport11) Ipc04G0007760 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc04G0007770 AT5G46080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0007780 AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc04G0007790 AT5G44180.3 0 0 Homeodomain-like transcriptional regulator;(source:Araport11) Ipc04G0007800 AT3G46970.1 alpha-glucan phosphorylase 2 Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen. alpha-glucan phosphorylase 2;(source:Araport11) Ipc04G0007810 AT1G28410.2 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc04G0007820 AT2G33855.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0007830 #N/A #N/A #N/A #N/A Ipc04G0007840 AT2G33847.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0007850 AT2G33845.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0007860 AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0007870 AT1G28380.1 MAC/Perforin domain-containing protein This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots. The mRNA is cell-to-cell mobile. MAC/Perforin domain-containing protein;(source:Araport11) Ipc04G0007880 AT5G44210.1 erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9;(source:Araport11) Ipc04G0007890 AT2G33835.1 Zinc finger C-x8-C-x5-C-x3-H type family protein Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0007900 AT1G16250.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc04G0007910 AT1G28330.1 dormancy-associated protein-like 1 dormancy-associated protein (DRM1) dormancy-associated protein-like 1;(source:Araport11) Ipc04G0007920 AT5G44280.1 RING 1A Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression. RING 1A;(source:Araport11) Ipc04G0007930 AT1G28320.1 protease-related Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH. protease-like protein;(source:Araport11) Ipc04G0007940 AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein 0 Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) Ipc04G0007950 AT1G28260.2 Telomerase activating protein Est1 0 Telomerase activating protein Est1;(source:Araport11) Ipc04G0007960 AT1G28280.2 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc04G0007970 AT4G20980.4 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11) Ipc04G0007980 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0007990 AT5G58950.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0008000 AT2G03820.1 nonsense-mediated mRNA decay NMD3 family protein Encodes a protein involved in the nuclear export of the 60S ribosomal subunit and formation of the secondary cell wall. nonsense-mediated mRNA decay NMD3 family protein;(source:Araport11) Ipc04G0008010 AT1G28240.1 Protein of unknown function (DUF616) 0 strawberry notch protein (DUF616);(source:Araport11) Ipc04G0008020 AT4G04970.1 glucan synthase-like 1 encodes a gene similar to callose synthase The mRNA is cell-to-cell mobile. glucan synthase-like 1;(source:Araport11) Ipc04G0008030 AT5G22620.5 0 encodes a putative 2-carboxy-D-arabinitol 1-phosphate phosphatase phosphoglycerate/bisphosphoglycerate mutase family protein;(source:Araport11) Ipc04G0008040 AT1G03700.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0008050 AT3G62120.3 0 Encodes a cytosolic prolyl-tRNA synthetase. Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc04G0008060 AT1G76510.3 ARID/BRIGHT DNA-binding domain-containing protein 0 ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc04G0008070 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc04G0008080 AT5G62020.1 heat shock transcription factor B2A member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile. heat shock transcription factor B2A;(source:Araport11) Ipc04G0008090 AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0008100 AT4G27450.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc04G0008110 AT4G04955.1 allantoinase Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied. allantoinase;(source:Araport11) Ipc04G0008120 AT1G48320.1 Thioesterase superfamily protein Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis. Thioesterase superfamily protein;(source:Araport11) Ipc04G0008130 AT4G21720.1 0 0 defensin-like protein;(source:Araport11) Ipc04G0008140 AT4G17020.1 transcription factor-related 0 transcription factor-like protein;(source:Araport11) Ipc04G0008150 AT5G01520.1 RING/U-box superfamily protein Encodes a cytosolic RING-type E3 ubiquitin (Ub) ligase that is critical for ABA and high salinity responses during germination. AtAIRP2 and SDIR1 likely play a combinatory role in ABA signaling and the response to high salt in Arabidopsis. RING/U-box superfamily protein;(source:Araport11) Ipc04G0008160 AT4G27460.1 Cystathionine beta-synthase (CBS) family protein 0 Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc04G0008170 AT2G47960.1 0 Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. trafficking protein particle complex subunit-like protein;(source:Araport11) Ipc04G0008180 AT4G04920.3 0 Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress. Required for expression of CBF-controlled cold-upregulated genes and some, but not all, other cold up-regulated genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes. SFR6 was isolated as a suppressor of cell wall defects in cob6 mutant background. sensitive to freezing 6;(source:Araport11) Ipc04G0008190 AT3G09010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0008200 AT2G20760.1 Clathrin light chain protein 0 Clathrin light chain protein;(source:Araport11) Ipc04G0008210 AT4G21670.1 C-terminal domain phosphatase-like 1 encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. C-terminal domain phosphatase-like 1;(source:Araport11) Ipc04G0008220 AT3G51000.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0008230 AT3G05600.2 0 Encodes a cytosolic epoxide hydrolase capable of acting on 9,10-epoxystearic acid and on 12,13- epoxyoctadec-9-enoic acid that is involved in the synthesis of poly-hydroxylated cutin monomers. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0008240 AT2G20780.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0008250 AT2G35630.1 ARM repeat superfamily protein Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity. The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc04G0008260 AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc04G0008270 AT5G46160.2 Ribosomal protein L14p/L23e family protein 0 Ribosomal protein L14p/L23e family protein;(source:Araport11) Ipc04G0008280 AT1G61150.9 0 0 LisH and RanBPM domains containing protein;(source:Araport11) Ipc04G0008290 AT1G11120.2 0 0 CTTNBP 2 amino-terminal-like protein;(source:Araport11) Ipc04G0008300 AT1G61240.6 0 0 lysine ketoglutarate reductase trans-splicing-like protein (DUF707);(source:Araport11) Ipc04G0008310 AT1G61250.1 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc04G0008320 AT4G21620.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc04G0008330 AT2G29990.1 alternative NAD(P)H dehydrogenase 2 0 alternative NAD(P)H dehydrogenase 2;(source:Araport11) Ipc04G0008340 AT5G54370.1 Late embryogenesis abundant (LEA) protein-related 0 Late embryogenesis abundant (LEA) protein-like protein;(source:Araport11) Ipc04G0008350 AT4G21580.1 oxidoreductase, zinc-binding dehydrogenase family protein 0 oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc04G0008360 AT4G34210.1 SKP1-like 11 one of 20 SKP1 homologs in Arabidopsis. Protein is most similar to ASK12 and RNAi lines show defects in stamen development. SKP1-like 11;(source:Araport11) Ipc04G0008370 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc04G0008380 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc04G0008390 AT1G61260.1 Protein of unknown function (DUF761) 0 cotton fiber (DUF761);(source:Araport11) Ipc04G0008400 AT5G54280.2 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc04G0008410 AT4G21510.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0008420 AT5G53540.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a P-loop NTPase APP1. The disruption of APP1 is accompanied by a reduction in ROS level, a rise in the rate of cell division in the quiescent center (QC) and the promotion of root distal stem cell (DSC) differentiation. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0008430 AT4G05020.1 NAD(P)H dehydrogenase B2 0 NAD(P)H dehydrogenase B2;(source:Araport11) Ipc04G0008440 AT1G61350.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0008450 AT1G11260.1 sugar transporter 1 Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile. sugar transporter 1;(source:Araport11) Ipc04G0008460 #N/A #N/A #N/A #N/A Ipc04G0008470 AT4G21450.1 PapD-like superfamily protein 0 PapD-like superfamily protein;(source:Araport11) Ipc04G0008480 AT4G21445.1 0 CRR9 gene encodes a novel stromal protein without any known functional domains or motifs. It is highly conserved in cyanobacteria and land plants but not in green algae. receptor-interacting protein;(source:Araport11) Ipc04G0008490 AT4G05070.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Positively regulates plant resistance against Pst DC3000 by enhancing PTI responses. Wound-responsive family protein;(source:Araport11) Ipc04G0008500 AT4G05090.1 Inositol monophosphatase family protein 0 Inositol monophosphatase family protein;(source:Araport11) Ipc04G0008510 AT5G65200.1 plant U-box 38 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 38;(source:Araport11) Ipc04G0008520 AT4G11740.2 0 Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc04G0008530 AT4G21440.1 MYB-like 102 Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family. MYB-like 102;(source:Araport11) Ipc04G0008540 AT4G21430.1 Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase 0 protein B160;(source:Araport11) Ipc04G0008550 AT4G05150.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc04G0008560 AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0008570 AT1G61620.1 phosphoinositide binding Encodes a RING-finger E3 ubiquitin ligase that plays a major role in maintaining COP1 homeostasis by targeting COP1 for ubiquitination and degradation in dark-grown seedlings. The mRNA is cell-to-cell mobile. phosphoinositide binding protein;(source:Araport11) Ipc04G0008580 AT1G32910.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc04G0008590 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0008600 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0008610 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0008620 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008630 AT1G61370.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008640 AT1G61550.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008650 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc04G0008660 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008670 AT1G61370.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008680 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008690 AT1G11410.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0008700 AT4G21350.1 plant U-box 8 Encodes a U-box/ARM repeat protein required fore self-incompatibility. plant U-box 8;(source:Araport11) Ipc04G0008710 AT5G54500.1 flavodoxin-like quinone reductase 1 Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. flavodoxin-like quinone reductase 1;(source:Araport11) Ipc04G0008720 AT1G61660.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a transcriptional activator that regulates the expression of genes by binding to their GCG- or E-boxes to mediate physiological responses, including proline biosynthesis and ROS scavenging pathways, to enhance stress tolerance. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0008730 AT1G61667.2 0 0 serine protease, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc04G0008740 AT4G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor strongly expressed in the tapetum from late anther stage 5 to early stage 6, and at a lower level in meiocytes. dyt1 mutant exhibits abnormal anther morphology beginning at anther stage 4. DYT1 acts downstream of SPL/NZZ and EMS1/EXS , and regulates the expression of downstream genes like AMS, MS1 and other tapetum preferential genes for pollen development, primarily via TDF1. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0008750 AT1G11480.1 eukaryotic translation initiation factor-related 0 eukaryotic translation initiation factor-like protein;(source:Araport11) Ipc04G0008760 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc04G0008770 AT4G21320.1 Aldolase-type TIM barrel family protein Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc04G0008780 AT4G25210.1 DNA-binding storekeeper protein-related transcriptional regulator 0 DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc04G0008790 AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0008800 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008810 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008820 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008830 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008840 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008850 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008860 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008870 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008880 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008890 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008900 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008910 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008920 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008930 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008940 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008950 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008960 AT4G23280.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 20;(source:Araport11) Ipc04G0008970 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008980 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0008990 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0009000 AT3G01190.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc04G0009010 AT4G21215.2 0 0 transmembrane protein;(source:Araport11) Ipc04G0009020 AT1G61770.1 Chaperone DnaJ-domain superfamily protein J domain protein. The mRNA is cell-to-cell mobile. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0009030 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc04G0009040 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc04G0009050 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc04G0009060 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc04G0009070 AT4G27130.1 Translation initiation factor SUI1 family protein 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc04G0009080 AT1G61780.1 postsynaptic protein-related 0 postsynaptic protein-like protein;(source:Araport11) Ipc04G0009090 AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8 0 xyloglucan endotransglucosylase/hydrolase 8;(source:Araport11) Ipc04G0009100 AT4G21170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0009110 AT4G28556.1 PAK-box/P21-Rho-binding family protein Encodes RIC7, the downstream effector of active Rop2 GTPase. PAK-box/P21-Rho-binding family protein;(source:Araport11) Ipc04G0009120 AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc04G0009130 AT4G21750.4 0 Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene Primes spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc04G0009140 AT1G61800.1 glucose-6-phosphate/phosphate translocator 2 glucose6-Phosphate/phosphate transporter 2. Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile. glucose-6-phosphate/phosphate translocator 2;(source:Araport11) Ipc04G0009150 AT2G22145.1 ECA1 gametogenesis related family protein Encodes a ECA1 gametogenesis related family protein ECA1 gametogenesis related family protein;(source:Araport11) Ipc04G0009160 AT4G21760.2 0 0 beta-glucosidase 47;(source:Araport11) Ipc04G0009170 AT1G61820.1 beta glucosidase 46 0 beta glucosidase 46;(source:Araport11) Ipc04G0009180 AT4G21760.1 beta-glucosidase 47 0 beta-glucosidase 47;(source:Araport11) Ipc04G0009190 AT4G21760.1 beta-glucosidase 47 0 beta-glucosidase 47;(source:Araport11) Ipc04G0009200 AT1G61850.2 phospholipases;galactolipases Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea. phospholipase A I-like protein;(source:Araport11) Ipc04G0009210 AT4G04870.1 cardiolipin synthase Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria. cardiolipin synthase;(source:Araport11) Ipc04G0009220 AT4G21790.1 tobamovirus multiplication 1 encodes a host factor that is required for TMV virus multiplication. The mRNA is cell-to-cell mobile. tobamovirus multiplication 1;(source:Araport11) Ipc04G0009230 AT4G21820.2 0 0 binding / calmodulin binding protein;(source:Araport11) Ipc04G0009240 AT4G21870.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0009250 AT4G04780.1 mediator 21 Encodes the med21 subunit of the mediator complex which is involved in transcriptional regulation. MED21 interacts physically with the E3 ligase HUB1 and this interaction may be important in mediation defense responses to fungal pathogens. mediator 21;(source:Araport11) Ipc04G0009260 AT4G21895.2 0 0 DNA binding protein;(source:Araport11) Ipc04G0009270 AT4G04770.1 ATP binding cassette protein 1 Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. ATP binding cassette protein 1;(source:Araport11) Ipc04G0009280 AT1G11655.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0009290 AT3G21690.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc04G0009300 AT1G11700.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc04G0009310 AT5G54970.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0009320 AT1G11720.1 starch synthase 3 Encodes a starch synthase that in addition to its role in starch biosynthesis also has a negative regulatory function in the biosynthesis of transient starch. The protein apparently contains a starch-binding domain (SBD). starch synthase 3;(source:Araport11) Ipc04G0009330 AT1G62040.1 Ubiquitin-like superfamily protein Autophagy protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc04G0009340 AT1G57680.3 0 0 plasminogen activator inhibitor;(source:Araport11) Ipc04G0009350 AT4G10040.1 cytochrome c-2 Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers. Double mutants with CYTC-1 accumulate starch during the day, have delayed growth and development and reduced GA and DELLA proteins linking cellular metabolism and GA homeostasis. cytochrome c-2;(source:Araport11) Ipc04G0009360 AT4G21192.2 Cytochrome c oxidase biogenesis protein Cmc1-like 0 Cytochrome c oxidase biogenesis protein Cmc1-like protein;(source:Araport11) Ipc04G0009370 AT1G10280.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc04G0009380 AT1G59610.1 dynamin-like 3 A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. The mRNA is cell-to-cell mobile. dynamin-like 3;(source:Araport11) Ipc04G0009390 AT2G23390.1 0 0 acyl-CoA;(source:Araport11) Ipc04G0009400 AT4G24265.2 0 0 homeobox protein;(source:Araport11) Ipc04G0009410 #N/A #N/A #N/A #N/A Ipc04G0009420 AT4G22360.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) Ipc04G0009430 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc04G0009440 AT3G51970.1 acyl-CoA sterol acyl transferase 1 0 acyl-CoA sterol acyl transferase 1;(source:Araport11) Ipc04G0009450 AT1G12060.1 BCL-2-associated athanogene 5 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 5;(source:Araport11) Ipc04G0009460 AT1G12050.1 fumarylacetoacetase, putative Encodes a fumarylacetoacetase that converts fumarylacetoacetate to acetoacetate and fumarate and is likely to be involved in tyrosine catabolism. fumarylacetoacetase;(source:Araport11) Ipc04G0009470 AT1G12050.1 fumarylacetoacetase, putative Encodes a fumarylacetoacetase that converts fumarylacetoacetate to acetoacetate and fumarate and is likely to be involved in tyrosine catabolism. fumarylacetoacetase;(source:Araport11) Ipc04G0009480 AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors 0 transcription initiation factor IIF subunit alpha RAP74;(source:Araport11) Ipc04G0009490 AT3G27200.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc04G0009500 AT1G74060.1 Ribosomal protein L6 family protein 0 Ribosomal protein L6 family protein;(source:Araport11) Ipc04G0009510 AT4G22320.2 0 0 golgin family A protein;(source:Araport11) Ipc04G0009520 AT3G01435.4 0 0 Expressed protein;(source:Araport11) Ipc04G0009530 AT1G12020.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0009540 AT1G62400.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0009550 AT4G22290.1 Ubiquitin-specific protease family C19-related protein Paralog of SHOU4-like Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc04G0009560 AT4G31570.7 0 0 nucleoporin;(source:Araport11) Ipc04G0009570 AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc04G0009580 AT2G15325.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc04G0009590 AT3G20300.1 Protein of unknown function (DUF3537) 0 extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11) Ipc04G0009600 AT1G05000.1 Phosphotyrosine protein phosphatases superfamily protein Encodes an atypical dual-specificity phosphatase. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc04G0009610 AT1G12000.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0009620 AT4G22190.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc04G0009630 AT4G22130.1 STRUBBELIG-receptor family 8 0 STRUBBELIG-receptor family 8;(source:Araport11) Ipc04G0009640 AT4G04330.1 Chaperonin-like RbcX protein Encodes a chloroplast thylakoid localized RbcX protein that acts as a chaperone in the folding of Rubisco. Chaperonin-like RbcX protein;(source:Araport11) Ipc04G0009650 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc04G0009660 AT4G22120.6 ERD (early-responsive to dehydration stress) family protein Calcium-permeable stretch activated cation channel. ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc04G0009670 AT1G62305.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc04G0009680 AT1G11915.1 0 0 wall-associated receptor kinase galacturonan-binding protein;(source:Araport11) Ipc04G0009690 AT1G62300.1 WRKY family transcription factor Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress. WRKY family transcription factor;(source:Araport11) Ipc04G0009700 AT1G62280.1 SLAC1 homologue 1 Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane. SLAC1 homologue 1;(source:Araport11) Ipc04G0009710 AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc04G0009720 AT1G11860.2 Glycine cleavage T-protein family 0 Glycine cleavage T-protein family;(source:Araport11) Ipc04G0009730 AT1G62250.3 0 0 orotidine 5-phosphate decarboxylase;(source:Araport11) Ipc04G0009740 AT4G28200.1 0 0 U3 small nucleolar RNA-associated-like protein;(source:Araport11) Ipc04G0009750 #N/A #N/A #N/A #N/A Ipc04G0009760 AT4G04605.1 0 0 Myb-like DNA-binding domain protein;(source:Araport11) Ipc04G0009770 AT4G22010.1 SKU5 similar 4 0 SKU5 similar 4;(source:Araport11) Ipc04G0009780 AT5G13390.1 no exine formation 1 Required for normal pollen development and lipid accumulation within the tapetum no exine formation 1;(source:Araport11) Ipc04G0009790 AT4G21990.1 APS reductase 3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APS reductase 3;(source:Araport11) Ipc04G0009800 AT1G11840.6 glyoxalase I homolog Encodes Ni+ dependent glyoxalase I homolog ATGLX1. glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein;(source:Araport11) Ipc04G0009810 AT1G11790.1 arogenate dehydratase 1 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. arogenate dehydratase 1;(source:Araport11) Ipc04G0009820 AT1G09600.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0009830 AT1G09660.3 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc04G0009840 AT1G33980.1 Smg-4/UPF3 family protein Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD) Smg-4/UPF3 family protein;(source:Araport11) Ipc04G0009850 AT1G09830.1 Glycinamide ribonucleotide (GAR) synthetase glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide Glycinamide ribonucleotide (GAR) synthetase;(source:Araport11) Ipc04G0009860 AT5G49910.1 chloroplast heat shock protein 70-2 Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile. chloroplast heat shock protein 70-2;(source:Araport11) Ipc04G0009870 AT5G49920.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc04G0009880 AT5G05010.2 clathrin adaptor complexes medium subunit family protein 0 clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc04G0009890 AT5G05010.2 clathrin adaptor complexes medium subunit family protein 0 clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc04G0009900 AT1G09810.2 0 0 evolutionarily conserved C-terminal region 11;(source:Araport11) Ipc04G0009910 AT1G09800.2 0 0 Pseudouridine synthase family protein;(source:Araport11) Ipc04G0009920 AT3G02430.1 Protein of unknown function (DUF679) 0 transmembrane protein, putative (DUF679);(source:Araport11) Ipc04G0009930 AT1G07360.1 CCCH-type zinc fingerfamily protein with RNA-binding domain Encodes MAC5A, a component of the MOS4-associated complex (MAC) that contributes to snc1- mediated autoimmunity. MAC is a highly conserved nuclear protein complex associated with the spliceosome. Homologues include AT1G07360 (MAC5A), AT2G29580 (MAC5B) and AT5G07060 (MAC5C). CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11) Ipc04G0009940 AT1G74950.2 0 0 TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc04G0009950 AT1G80160.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc04G0009960 AT1G58060.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc04G0009970 AT1G09795.1 ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis ATP phosphoribosyl transferase 2;(source:Araport11) Ipc04G0009980 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc04G0009990 AT1G09794.1 Cox19 family protein (CHCH motif) 0 Cox19 family protein (CHCH motif);(source:Araport11) Ipc04G0010000 AT4G06676.1 0 0 etoposide-induced protein;(source:Araport11) Ipc04G0010010 AT1G58100.1 TCP family transcription factor Encodes TCP8, belongs to the TCP transcription factor family known to bind site II elements in promoter regions. TCP family transcription factor;(source:Araport11) Ipc04G0010020 AT4G06634.1 zinc finger (C2H2 type) family protein Encodes an ABA responsive C2H2-type zinc finger transcription factor with both transcriptional repression and activation domains, that binds a G-rich, 11-bp DNA-binding motif. YY1 binds to the promoter of ABR1 and disruption represses ABA- and salt-induced ABR1 expression. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc04G0010030 AT1G16430.1 Surfeit locus protein 5 subunit 22 of Mediator complex 0 Surfeit locus protein 5 subunit 22 of Mediator complex;(source:Araport11) Ipc04G0010040 AT2G32060.3 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc04G0010050 AT1G58110.2 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc04G0010060 AT3G58970.1 magnesium transporter 6 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 6;(source:Araport11) Ipc04G0010070 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc04G0010080 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc04G0010090 AT1G61010.5 0 0 cleavage and polyadenylation specificity factor 73-I;(source:Araport11) Ipc04G0010100 AT4G35790.2 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc04G0010110 AT3G27080.1 translocase of outer membrane 20 kDa subunit 3 Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins translocase of outer membrane 20 kDa subunit 3;(source:Araport11) Ipc04G0010120 AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein encodes a major leaf ferredoxin 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc04G0010130 AT1G22020.2 0 Encodes a putative serine hydroxymethyltransferase. serine hydroxymethyltransferase 6;(source:Araport11) Ipc04G0010140 AT1G71190.1 senescence associated gene 18 Senescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication. senescence associated gene 18;(source:Araport11) Ipc04G0010150 AT1G71160.1 3-ketoacyl-CoA synthase 7 Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 7;(source:Araport11) Ipc04G0010160 AT2G17390.1 ankyrin repeat-containing 2B Highly homologous to AKR2A. Involved in chloroplast biogenesis. Double mutants of AKR2A and AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes. The mRNA is cell-to-cell mobile. ankyrin repeat-containing 2B;(source:Araport11) Ipc04G0010170 AT1G21900.1 emp24/gp25L/p24 family/GOLD family protein Encodes an ER-localized p24 protein. Interacts with p24beta2 at ER export sites for ER exit and coupled transport to the Golgi apparatus. Once in the Golgi, p24delta5 interacts very efficiently with the COPI machinery for retrograde transport back to the ER. emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc04G0010180 AT1G10780.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc04G0010190 AT1G10790.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0010200 AT4G15770.1 RNA binding 0 RNA binding protein;(source:Araport11) Ipc04G0010210 AT1G68180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0010220 AT5G22370.3 0 Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800). P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0010230 AT5G24690.1 Protein of unknown function (DUF3411) 0 plant/protein, putative (DUF3411);(source:Araport11) Ipc04G0010240 AT1G77700.2 0 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc04G0010250 AT1G33270.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 0 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc04G0010260 AT5G24750.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0010270 AT1G11400.6 0 The PYM gene encodes a protein capable of interacting with MAGO, and Y14, whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually, or when they are together. But, MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic, but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined, but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus. partner of Y14-MAGO;(source:Araport11) Ipc04G0010280 AT1G25260.1 Ribosomal protein L10 family protein 0 Ribosomal protein L10 family protein;(source:Araport11) Ipc04G0010290 AT4G22970.1 homolog of separase Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature. separase;(source:Araport11) Ipc04G0010300 AT1G68140.4 0 0 zinc finger/BTB domain protein, putative (DUF1644);(source:Araport11) Ipc04G0010310 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0010320 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0010330 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0010340 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0010350 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0010360 AT1G43170.9 ribosomal protein 1 Encodes a cytoplasmic ribosomal protein. The mRNA is cell-to-cell mobile. ribosomal protein 1;(source:Araport11) Ipc04G0010370 AT4G14110.1 COP9 signalosome, subunit CSN8 Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex. COP9 signalosome, subunit CSN8;(source:Araport11) Ipc04G0010380 AT1G69060.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0010390 AT5G09876.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0010410 AT2G06000.2 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0010400 AT3G08840.5 0 0 D-alanine-D-alanine ligase family;(source:Araport11) Ipc04G0010420 AT4G15570.3 0 Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0010430 AT1G18740.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc04G0010440 AT1G25280.1 tubby like protein 10 Member of TLP family tubby like protein 10;(source:Araport11) Ipc04G0010450 AT4G34950.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0010460 AT3G12110.1 actin-11 Encodes an actin that is expressed predominantly during reproductive development. actin-11;(source:Araport11) Ipc04G0010470 AT2G07760.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0010480 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0010490 AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein 0 Ubiquinol-cytochrome C reductase hinge protein;(source:Araport11) Ipc04G0010500 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc04G0010510 AT1G03050.1 ENTH/ANTH/VHS superfamily protein Phosphatidylinositol binding clathrin assembly protein 5A/B are recent paralogs with overlapping functions in recycling ANXUR proteins to the pollen tube membrane. ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc04G0010520 AT5G57190.1 phosphatidylserine decarboxylase 2 Encodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast. phosphatidylserine decarboxylase 2;(source:Araport11) Ipc04G0010530 AT3G55550.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc04G0010540 AT3G19720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFP-ARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0010550 AT5G64570.1 beta-D-xylosidase 4 Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4;(source:Araport11) Ipc04G0010560 AT4G33430.1 BRI1-associated receptor kinase Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase;(source:Araport11) Ipc04G0010570 AT1G22040.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc04G0010580 AT1G30545.2 0 0 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein;(source:Araport11) Ipc04G0010590 AT5G02600.2 Heavy metal transport/detoxification superfamily protein Encodes a phloem mobile metal binding protein necessary for phloem function and root meristem maintenance. Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0010600 AT1G22150.4 0 sulfate transporter Sultr1;3 sulfate transporter 1;(source:Araport11) Ipc04G0010610 AT1G22150.4 0 sulfate transporter Sultr1;3 sulfate transporter 1;(source:Araport11) Ipc04G0010620 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc04G0010630 AT2G13840.1 Polymerase/histidinol phosphatase-like 0 Polymerase/histidinol phosphatase-like protein;(source:Araport11) Ipc04G0010640 AT5G64160.1 0 0 plant/protein;(source:Araport11) Ipc04G0010650 AT1G78160.1 pumilio 7 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 7;(source:Araport11) Ipc04G0010660 AT5G09390.1 CD2-binding protein-related 0 CD2-binding protein-like protein;(source:Araport11) Ipc04G0010670 AT5G09400.1 K+ uptake permease 7 Encodes a potassium uptake permease with a functional adenylate cyclase (AC) center. The first 100 aa of this protein can complement AC-deficient E. coli and display AC activity in vitro. KUP7 is localized to the plasma membrane where it functions in potassium uptake and translocation. K+ uptake permease 7;(source:Araport11) Ipc04G0010680 AT4G33520.2 P-type ATP-ase 1 Encodes a putative metal-transporting P-type ATPase PAA1. An alternative-splicing event of the PAA1 pre-mRNA produces a copper chaperon named PCH1. The mRNA is cell-to-cell mobile. P-type ATP-ase 1;(source:Araport11) Ipc04G0010690 AT4G33520.1 P-type ATP-ase 1 Encodes a putative metal-transporting P-type ATPase PAA1. An alternative-splicing event of the PAA1 pre-mRNA produces a copper chaperon named PCH1. The mRNA is cell-to-cell mobile. P-type ATP-ase 1;(source:Araport11) Ipc04G0010700 AT3G29770.1 methyl esterase 11 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 11;(source:Araport11) Ipc04G0010710 AT1G19270.2 0 Encodes a ubiquitin-activated peptidase that is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. DA1;(source:Araport11) Ipc04G0010720 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010730 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010750 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010760 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010770 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010740 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0010780 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0010790 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc04G0010800 AT4G21790.1 tobamovirus multiplication 1 encodes a host factor that is required for TMV virus multiplication. The mRNA is cell-to-cell mobile. tobamovirus multiplication 1;(source:Araport11) Ipc04G0010810 AT1G34750.3 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0010820 AT1G02170.1 metacaspase 1 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 1;(source:Araport11) Ipc04G0010830 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc04G0010840 AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0010850 AT5G64300.1 GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively The mRNA is cell-to-cell mobile. GTP cyclohydrolase II;(source:Araport11) Ipc04G0010860 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0010870 AT5G37780.1 calmodulin 1 encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. calmodulin 1;(source:Araport11) Ipc04G0010880 AT4G33590.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0010890 AT1G32750.1 HAC13 protein (HAC13) This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation. HAC13 protein (HAC13);(source:Araport11) Ipc04G0010900 AT4G33580.3 0 0 beta carbonic anhydrase 5;(source:Araport11) Ipc04G0010910 AT4G24540.1 AGAMOUS-like 24 Encodes a MADS-box protein involved in flowering. Regulates the expression of SOC1 and is also upregulated by SOC1. Binds with IMK3 kinase domain. Phosphorylated by IMK3; likely to be a target for IMK3 kinase domain. AGAMOUS-like 24;(source:Araport11) Ipc04G0010920 AT5G09550.1 GDP dissociation inhibitor family protein / Rab GTPase activator family protein 0 GDP dissociation inhibitor family protein / Rab GTPase activator family protein;(source:Araport11) Ipc04G0010930 AT4G33625.1 0 0 vacuole protein;(source:Araport11) Ipc04G0010940 AT4G33630.3 0 Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death. UvrB/UvrC domain protein (DUF3506);(source:Araport11) Ipc04G0010950 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0010960 AT3G21175.1 ZIM-like 1 member of a novel family of plant-specific GATA-type transcription factors. ZIM-like 1;(source:Araport11) Ipc04G0010970 AT5G09570.1 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc04G0010980 AT5G62490.1 HVA22 homologue B Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. HVA22 homologue B;(source:Araport11) Ipc04G0010990 AT1G69700.1 HVA22 homologue C Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. The mRNA is cell-to-cell mobile. HVA22 homologue C;(source:Araport11) Ipc04G0011000 AT2G19380.1 RNA recognition motif (RRM)-containing protein 0 RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc04G0011010 AT5G09590.1 mitochondrial HSO70 2 heat shock protein 70 (Hsc70-5); nuclear mitochondrial HSO70 2;(source:Araport11) Ipc04G0011020 AT5G09600.3 succinate dehydrogenase 3-1 Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2. succinate dehydrogenase 3-1;(source:Araport11) Ipc04G0011030 AT5G64420.1 DNA polymerase V family 0 DNA polymerase V family;(source:Araport11) Ipc04G0011040 AT5G10630.1 Translation elongation factor EF1A/initiation factor IF2gamma family protein Interacts with both Pelota1 and Pelota2 to form the non-stop decay (NSD) complex which is involved in quality control during translation. Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11) Ipc04G0011050 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc04G0011060 AT5G64470.2 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc04G0011070 AT2G14255.1 Ankyrin repeat family protein with DHHC zinc finger domain 0 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11) Ipc04G0011080 AT5G64510.1 0 Encodes Tunicamycin Induced 1(TIN1), a plant-specic ER stress-inducible protein. TIN1 mutation affects pollen surface morphology. Transcriptionally induced by treatment with the N-linked glyclsylation inhibitor tunicamycin. tunicamycin induced protein;(source:Araport11) Ipc04G0011090 AT4G17000.3 0 0 neurofilament heavy protein;(source:Araport11) Ipc04G0011100 AT5G51510.1 0 0 jagunal-like protein;(source:Araport11) Ipc04G0011110 AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc04G0011120 AT4G33690.1 0 0 G patch domain protein;(source:Araport11) Ipc04G0011130 AT1G02520.3 0 Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.The mRNA is cell-to-cell mobile. P-glycoprotein 11;(source:Araport11) Ipc04G0011140 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011150 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011160 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011170 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011180 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011190 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc04G0011200 AT1G16630.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0011210 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc04G0011220 AT1G20950.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0011230 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0011240 AT2G42770.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc04G0011250 AT2G30980.1 SHAGGY-related protein kinase dZeta Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. SHAGGY-related protein kinase dZeta;(source:Araport11) Ipc04G0011260 AT5G46680.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0011270 AT5G45775.2 Ribosomal L5P family protein 0 Ribosomal L5P family protein;(source:Araport11) Ipc04G0011280 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011290 AT3G18670.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011300 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011310 AT3G18670.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011320 AT4G03490.4 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011330 AT3G58710.2 WRKY DNA-binding protein 69 member of WRKY Transcription Factor; Group II-e WRKY DNA-binding protein 69;(source:Araport11) Ipc04G0011340 AT1G06400.1 Ras-related small GTP-binding family protein small GTP-binding protein (ara-2).RabGTPase functioning in anterograde trafficking from trans-Golgi network/early endosomal compartments to the plasma membrane as well as in responses to salinity stress. Ras-related small GTP-binding family protein;(source:Araport11) Ipc04G0011350 AT2G42690.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0011360 AT2G42670.2 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc04G0011370 AT2G30990.5 0 0 arginine N-methyltransferase, putative (DUF688);(source:Araport11) Ipc04G0011380 AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein 0 Cwf15 / Cwc15 cell cycle control family protein;(source:Araport11) Ipc04G0011400 AT2G31040.1 ATP synthase protein I -related Encodes an integral thylakoid protein that facilitates assembly of the membranous part of the chloroplast ATPase. ATP synthase protein I-like protein;(source:Araport11) Ipc04G0011390 #N/A #N/A #N/A #N/A Ipc04G0011410 AT1G06340.1 Plant Tudor-like protein 0 Plant Tudor-like protein;(source:Araport11) Ipc04G0011420 AT2G42590.2 general regulatory factor 9 14-3-3 gene. Binds calcium and displays induced structural changes. general regulatory factor 9;(source:Araport11) Ipc04G0011430 AT1G06320.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0011440 AT3G58610.3 ketol-acid reductoisomerase 0 ketol-acid reductoisomerase;(source:Araport11) Ipc04G0011450 AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0011460 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0011470 AT1G53270.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc04G0011480 AT5G13710.2 sterol methyltransferase 1 SMT1 controls the level of cholesterol in plants sterol methyltransferase 1;(source:Araport11) Ipc04G0011490 AT3G58600.1 Adaptin ear-binding coat-associated protein 1 NECAP-1 0 Adaptin ear-binding coat-associated protein 1 NECAP-1;(source:Araport11) Ipc04G0011500 AT2G31130.6 0 0 hypothetical protein;(source:Araport11) Ipc04G0011510 AT2G40150.1 TRICHOME BIREFRINGENCE-LIKE 28 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 28;(source:Araport11) Ipc04G0011520 AT3G62000.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0011530 AT3G18670.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011540 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011550 AT3G29770.1 methyl esterase 11 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 11;(source:Araport11) Ipc04G0011560 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0011570 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0011580 AT4G19020.2 0 Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance. chromomethylase 2;(source:Araport11) Ipc04G0011590 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0011600 AT1G09390.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0011610 AT3G62280.2 0 GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0011620 AT1G56670.2 0 GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0011630 AT3G50590.1 Transducin/WD40 repeat-like superfamily protein WD40/YVTN repeat protein. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0011640 AT1G56670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0011650 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0011660 AT5G66590.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0011670 AT2G47510.3 0 Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle. fumarase 1;(source:Araport11) Ipc04G0011680 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0011690 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0011700 AT3G14205.1 Phosphoinositide phosphatase family protein 0 Phosphoinositide phosphatase family protein;(source:Araport11) Ipc04G0011710 AT4G11030.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc04G0011720 AT2G33845.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0011730 AT2G33847.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0011740 AT4G28450.1 nucleotide binding;protein binding This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase WD repeat and SOF domain-containing protein 1;(source:Araport11) Ipc04G0011750 AT2G20580.1 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile. 26S proteasome regulatory subunit S2 1A;(source:Araport11) Ipc04G0011760 AT1G03820.1 0 0 E6-like protein;(source:Araport11) Ipc04G0011770 AT5G44180.2 Homeodomain-like transcriptional regulator 0 Homeodomain-like transcriptional regulator;(source:Araport11) Ipc04G0011780 AT1G03870.1 FASCICLIN-like arabinoogalactan 9 fasciclin-like arabinogalactan-protein 9 (Fla9) FASCICLIN-like arabinoogalactan 9;(source:Araport11) Ipc04G0011790 AT3G54680.1 proteophosphoglycan-related 0 proteophosphoglycan-like protein;(source:Araport11) Ipc04G0011800 AT3G58150.1 Optic atrophy 3 protein (OPA3) 0 Optic atrophy 3 protein (OPA3);(source:Araport11) Ipc04G0011810 AT1G06290.1 acyl-CoA oxidase 3 Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. The mRNA is cell-to-cell mobile. acyl-CoA oxidase 3;(source:Araport11) Ipc04G0011820 AT1G06290.1 acyl-CoA oxidase 3 Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. The mRNA is cell-to-cell mobile. acyl-CoA oxidase 3;(source:Araport11) Ipc04G0011830 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc04G0011840 AT5G45970.1 RAC-like 2 Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family. RAC-like 2;(source:Araport11) Ipc04G0011850 AT1G06280.1 LOB domain-containing protein 2 0 LOB domain-containing protein 2;(source:Araport11) Ipc04G0011860 AT2G42560.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 0 late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11) Ipc04G0011870 AT1G03780.2 targeting protein for XKLP2 Homolog of vertebrate TPX2. Protein has three domains involved in nuclear targeting, one in nuclear export and two in microtubule binding. Involved in mitotic spindle assembly during late prophase and early prometaphase. targeting protein for XKLP2;(source:Araport11) Ipc04G0011880 AT4G28390.2 0 Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli). ADP/ATP carrier 3;(source:Araport11) Ipc04G0011890 AT4G28365.1 early nodulin-like protein 3 0 early nodulin-like protein 3;(source:Araport11) Ipc04G0011900 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc04G0011910 AT5G22490.1 O-acyltransferase (WSD1-like) family protein 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc04G0011920 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0011930 AT2G20680.1 Glycosyl hydrolase superfamily protein Encodes a mannanase belonging to clade 1 of the GH5 7 phylogenetic tree that exhibits high substrate affinity and catalytic efficiency on mannan substrates with main chains containing both glucose and mannose units such as konjac glucomannan and spruce galactoglucomannan. It is likely a glycoprotein. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc04G0011940 AT1G53035.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0011950 AT4G28310.1 0 0 microtubule-associated protein;(source:Araport11) Ipc04G0011960 AT1G53025.1 Ubiquitin-conjugating enzyme family protein 0 Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc04G0011970 AT4G28300.1 Protein of unknown function (DUF1421) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall. The mRNA is cell-to-cell mobile. formin-like protein (DUF1421);(source:Araport11) Ipc04G0011980 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc04G0011990 AT2G20725.1 CAAX amino terminal protease family protein 0 CAAX amino terminal protease family protein;(source:Araport11) Ipc04G0012000 AT2G20770.1 GCR2-like 2 Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase. GCR2-like 2;(source:Araport11) Ipc04G0012010 AT5G64130.1 cAMP-regulated phosphoprotein 19-related protein 0 cAMP-regulated phosphoprotein 19-related protein;(source:Araport11) Ipc04G0012020 AT4G12950.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc04G0012030 AT4G03390.2 0 0 STRUBBELIG-receptor family 3;(source:Araport11) Ipc04G0012040 AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Identified in an enhancer trap line; member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc04G0012050 AT1G20860.1 phosphate transporter 1;8 Encodes Pht1;8, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc04G0012060 AT1G76440.3 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0012080 #N/A #N/A #N/A #N/A Ipc04G0012070 AT1G01360.1 regulatory component of ABA receptor 1 Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor. The mRNA is cell-to-cell mobile. regulatory component of ABA receptor 1;(source:Araport11) Ipc04G0012090 AT1G20870.2 0 Encodes an anti-silencing factor that prevents gene repression and DNA hypermethylation. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0012100 AT1G76510.4 0 0 ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc04G0012110 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc04G0012120 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0012130 AT1G03970.1 G-box binding factor 4 encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers. G-box binding factor 4;(source:Araport11) Ipc04G0012140 AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0012150 AT2G33560.1 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) Encodes BUBR1. May have the spindle assembly checkpoint protein functions conserved from yeast to humans. BUB1-related (BUB1: budding uninhibited by benzymidazol 1);(source:Araport11) Ipc04G0012160 AT1G76560.1 CP12 domain-containing protein 3 0 CP12 domain-containing protein 3;(source:Araport11) Ipc04G0012170 AT1G20980.1 squamosa promoter binding protein-like 14 Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture. The mRNA is cell-to-cell mobile. squamosa promoter binding protein-like 14;(source:Araport11) Ipc04G0012180 AT1G20990.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc04G0012190 AT1G76600.1 0 0 poly polymerase;(source:Araport11) Ipc04G0012210 AT1G76630.2 Tetratricopeptide repeat (TPR)-like superfamily protein SKI3 encodes a cytplasmically localized component of the SKI complex which is involved in exosome mediated RNA decay. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0012200 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc04G0012220 AT1G76660.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0012230 AT1G76670.2 0 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc04G0012240 AT1G79600.1 Protein kinase superfamily protein Encodes a chloroplast ABC1-like kinase that regulates vitamin E metabolism. Protein kinase superfamily protein;(source:Araport11) Ipc04G0012250 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc04G0012260 AT3G14730.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0019010 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0019000 AT2G27550.1 centroradialis encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations. It acts non-cell autonomously to inhibit floral initiation. centroradiali;(source:Araport11) Ipc01G0018990 AT1G08290.1 WIP domain protein 3 0 WIP domain protein 3;(source:Araport11) Ipc01G0018980 AT1G08280.1 Glycosyltransferase family 29 (sialyltransferase) family protein Encodes a glycosyltransferase (GT) GALT29A, which belongs to the Carbohydrate Active Enzyme family GT29. GALT29A co-expresses with other arabinogalactan GTs, GALT31A and GLCAT14A. The recombinant GALT29A expressed in Nicotiana benthamiana demonstrated a galactosyltransferase activity, transferring galactose from UDP-galactose to a mixture of various oligosaccharides derived from arabinogalactan proteins. Glycosyltransferase family 29 (sialyltransferase) family protein;(source:Araport11) Ipc01G0018970 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0018960 AT2G27600.1 AAA-type ATPase family protein Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function. The mRNA is cell-to-cell mobile. AAA-type ATPase family protein;(source:Araport11) Ipc01G0018950 AT3G44560.2 0 0 fatty acid reductase 8;(source:Araport11) Ipc01G0018940 AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc01G0018930 AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc01G0018920 AT5G59500.1 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases 0 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase;(source:Araport11) Ipc01G0018910 AT2G27680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0018900 AT3G44590.2 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc01G0018890 AT3G44600.1 cyclophilin71 Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3. cyclophilin71;(source:Araport11) Ipc01G0018880 AT3G44610.1 Protein kinase superfamily protein Kinase involved in the first positive phototropism and gravitropism. Phosphorylates serine residues in the cytoplasmic loop of PIN1 and shares phosphosite preferences with D6PK. Critical component for both hypocotyl phototropism and gravitropism, control tropic responses mainly through regulation of PIN-mediated auxin transport by protein phosphorylation. Protein kinase superfamily protein;(source:Araport11) Ipc01G0018870 AT2G36350.1 Protein kinase superfamily protein Member of AGC VIIIa Kinase gene family. Protein kinase superfamily protein;(source:Araport11) Ipc01G0018860 AT4G05400.3 0 0 copper ion binding protein;(source:Araport11) Ipc01G0018850 AT5G22510.2 0 Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. alkaline/neutral invertase;(source:Araport11) Ipc01G0018840 AT3G22430.1 0 0 RNA recognition motif XS domain protein;(source:Araport11) Ipc01G0018830 AT4G17895.1 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20;(source:Araport11) Ipc01G0018820 AT3G26744.6 0 Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. It also binds to and inhibits the expression of ABI3. Mutants are defective in cold-regulated gene expression and ABA signaling druing seed germination.. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. Together with ZOU, ICE1 determines primary seed dormancy depth independently of their joint role in endosperm development.ICE1 interacts with ABI5. Also members of the DELLA family, which repress ICE1 function. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0018810 AT3G21820.1 histone-lysine N-methyltransferase ATXR2 0 histone-lysine N-methyltransferase ATXR2;(source:Araport11) Ipc01G0018800 AT1G66960.4 0 0 Terpenoid cyclases family protein;(source:Araport11) Ipc01G0018790 AT2G27740.1 Family of unknown function (DUF662) 0 RAB6-interacting golgin (DUF662);(source:Araport11) Ipc01G0018780 AT2G27760.1 tRNAisopentenyltransferase 2 Encodes tRNA isopentenyltransferase, similar to yeast MOD5. tRNAisopentenyltransferase 2;(source:Araport11) Ipc01G0018770 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0018760 AT1G08250.1 arogenate dehydratase 6 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays. arogenate dehydratase 6;(source:Araport11) Ipc01G0018750 AT5G04560.3 0 Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele. HhH-GPD base excision DNA repair family protein;(source:Araport11) Ipc01G0018740 AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0018730 AT2G37610.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0018720 AT2G27920.1 serine carboxypeptidase-like 51 0 serine carboxypeptidase-like 51;(source:Araport11) Ipc01G0018710 AT2G27900.2 0 0 coiled-coil protein;(source:Araport11) Ipc01G0018700 AT1G08190.1 vacuolar protein sorting 41 Might be involved in protein sorting to the vacuole. The mRNA is cell-to-cell mobile. vacuolar protein sorting 41;(source:Araport11) Ipc01G0018690 AT3G53030.1 ser/arg-rich protein kinase 4 Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. ser/arg-rich protein kinase 4;(source:Araport11) Ipc01G0018680 AT5G22780.2 0 0 Adaptor protein complex AP-2, alpha subunit;(source:Araport11) Ipc01G0018670 AT3G44820.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc01G0018660 AT1G08200.1 UDP-D-apiose/UDP-D-xylose synthase 2 Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase. UDP-D-apiose/UDP-D-xylose synthase 2;(source:Araport11) Ipc01G0018650 AT3G44830.1 Lecithin:cholesterol acyltransferase family protein 0 Lecithin:cholesterol acyltransferase family protein;(source:Araport11) Ipc01G0018640 AT1G08390.1 0 Involved in preserving the stability of 45S rDNA repeats. recQ-mediated instability-like protein;(source:Araport11) Ipc01G0018630 AT5G22820.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0018620 AT5G50220.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0018610 AT3G22670.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0018600 AT5G22740.1 cellulose synthase-like A02 Encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. CSLA2 synthesizes the backbone of galactoglucomannan in seed coat epidermal cells. Both CSLA2 and MUCI10, which may be part of a protein complex, are critical for mucilage architecture. cellulose synthase-like A02;(source:Araport11) Ipc01G0018590 AT2G27980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc01G0018580 AT2G27970.1 CDK-subunit 2 0 CDK-subunit 2;(source:Araport11) Ipc01G0018570 AT1G11510.2 0 0 DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc01G0018560 AT5G22875.3 0 0 transmembrane protein;(source:Araport11) Ipc01G0018550 AT3G44890.1 ribosomal protein L9 Plastid ribosomal protein CL9 The mRNA is cell-to-cell mobile. ribosomal protein L9;(source:Araport11) Ipc01G0018540 AT5G04390.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc01G0018530 AT5G27990.2 0 0 Pre-rRNA-processing protein TSR2, conserved region;(source:Araport11) Ipc01G0018520 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0018510 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0018500 AT2G28150.1 Domain of unknown function (DUF966) DUF966 domain containing protein, expressed during embryogenesis. UPSTREAM OF FLC protein (DUF966);(source:Araport11) Ipc01G0018490 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc01G0018480 AT1G08130.1 DNA ligase 1 Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. In addition, it is an important component of the active DNA demethylation machinery and is indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus. DNA ligase 1;(source:Araport11) Ipc01G0018470 AT5G22930.1 Protein of unknown function (DUF1635) 0 enabled-like protein (DUF1635);(source:Araport11) Ipc01G0018460 AT3G44960.1 0 0 shugoshin;(source:Araport11) Ipc01G0018450 AT2G28130.1 0 NSE5 subunit of the SMC5/6 complex. actin protein 2/3 complex subunit-like protein;(source:Araport11) Ipc01G0018440 AT2G28120.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0018430 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0018420 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0018400 AT2G28110.1 Exostosin family protein Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings. Exostosin family protein;(source:Araport11) Ipc01G0018410 AT1G45130.2 0 0 beta-galactosidase 5;(source:Araport11) Ipc01G0018390 AT1G10660.4 0 0 transmembrane protein;(source:Araport11) Ipc01G0018380 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc01G0018370 AT1G21530.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0018360 AT5G22950.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc01G0018350 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0018340 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0018330 AT1G08125.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0018320 AT2G28100.1 alpha-L-fucosidase 1 Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase The mRNA is cell-to-cell mobile. alpha-L-fucosidase 1;(source:Araport11) Ipc01G0018310 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc01G0018300 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0018290 AT3G45040.1 phosphatidate cytidylyltransferase family protein Encodes a putative dolichol kinase that is localized to the endoplasmic reticulum and involved in pollen tube reception in the female gametophyte. phosphatidate cytidylyltransferase family protein;(source:Araport11) Ipc01G0018280 AT5G03340.1 ATPase, AAA-type, CDC48 protein 0 ATPase, AAA-type, CDC48 protein;(source:Araport11) Ipc01G0018270 AT3G45050.4 0 0 transmembrane protein;(source:Araport11) Ipc01G0018260 AT5G60770.1 nitrate transporter 2.4 member of High affinity nitrate transporter family nitrate transporter 2.4;(source:Araport11) Ipc01G0018250 AT2G28060.4 0 Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. 5-AMP-activated protein kinase beta-2 subunit protein;(source:Araport11) Ipc01G0018240 AT2G28050.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a relatively short regular p-class pentatricopeptide repeat protein comprising seven canonical p repeats and a single short s repeat that is necessary for the 5'-processing and stability of nad2 mRNA in mitochondria. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0018230 AT5G60760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0018220 AT2G28000.1 chaperonin-60alpha Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. The mRNA is cell-to-cell mobile. chaperonin-60alpha;(source:Araport11) Ipc01G0018210 AT3G45100.3 0 encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0018200 AT3G57120.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0018190 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc01G0018180 AT3G45750.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc01G0018170 AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc01G0018160 AT2G28260.1 cyclic nucleotide-gated channel 15 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 15;(source:Araport11) Ipc01G0018150 AT2G28315.1 Nucleotide/sugar transporter family protein UXT1 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and ER. UXT1 functions as a UDP-Xyl transporter. The mRNA is cell-to-cell mobile. Nucleotide/sugar transporter family protein;(source:Araport11) Ipc01G0018140 AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11) Ipc01G0018130 AT1G08010.3 0 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 11;(source:Araport11) Ipc01G0018120 AT2G28350.1 auxin response factor 10 Involved in root cap cell differentiation. auxin response factor 10;(source:Araport11) Ipc01G0018110 AT5G60680.1 Protein of unknown function, DUF584 0 transcription initiation factor TFIID subunit (Protein of unknown function, DUF584);(source:Araport11) Ipc01G0018100 AT2G37190.1 Ribosomal protein L11 family protein 0 Ribosomal protein L11 family protein;(source:Araport11) Ipc01G0018090 AT2G37170.2 0 a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev plasma membrane intrinsic protein 2;(source:Araport11) Ipc01G0018080 AT5G60640.1 PDI-like 1-4 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants. PDI-like 1-4;(source:Araport11) Ipc01G0018070 AT3G45230.1 hydroxyproline-rich glycoprotein family protein Encodes the arabinogalactan protein core of plant cell wall proteoglycan that contains arabinogalactan and cell wall matrix glycan pectin and/or xylan domains. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc01G0018060 AT5G60570.3 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0018050 AT5G60550.1 geminivirus rep interacting kinase 2 Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro. geminivirus rep interacting kinase 2;(source:Araport11) Ipc01G0018040 AT2G28470.3 0 putative beta-galactosidase (BGAL8 gene) beta-galactosidase 8;(source:Araport11) Ipc01G0018030 AT1G07980.1 nuclear factor Y, subunit C10 0 nuclear factor Y, subunit C10;(source:Araport11) Ipc01G0018020 AT5G03170.1 FASCICLIN-like arabinogalactan-protein 11 Encodes FLA11, a member of fasciclin-like arabinogalactan proteins (FLAs) containing a cell adhesion fasciclin (FAS) domain. Mutations result in altered stem biomechanics with reduced tensile strength and reduced tensile modulus of elasticity, as well as altered cell wall architecture and composition, with increased cellulose microfibril angle, reduced arabinose, galactose and cellulose content. FASCICLIN-like arabinogalactan-protein 11;(source:Araport11) Ipc01G0018010 AT3G09740.1 syntaxin of plants 71 syntaxin of plants 71 (SYP71) syntaxin of plants 71;(source:Araport11) Ipc01G0018000 AT1G59560.4 0 Encodes a chloroplast-localized putative RING-type ubiquitin E3 ligase. E3 Ubiquitin ligase family protein;(source:Araport11) Ipc01G0017990 AT1G61560.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc01G0017980 AT3G45290.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO3 belongs to the clade IV, with AtMLO2, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in primary root and lateral root primordia, in fruit abscission zone, in vascular system of cotyledons and in trichomes of young leaves,; it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc01G0017970 AT5G60450.2 0 Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. auxin response factor 4;(source:Araport11) Ipc01G0017960 AT1G07970.1 0 0 cytochrome B561, amino-terminal protein;(source:Araport11) Ipc01G0017950 AT5G60410.5 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein;(source:Araport11) Ipc01G0017940 AT1G07960.4 0 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. PDI-like 5-1;(source:Araport11) Ipc01G0017930 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc01G0017920 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc01G0017910 AT5G60410.5 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein;(source:Araport11) Ipc01G0017900 AT5G60370.1 0 0 exonuclease V-like protein;(source:Araport11) Ipc01G0017890 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc01G0017880 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc01G0017870 AT2G28500.1 LOB domain-containing protein 11 0 LOB domain-containing protein 11;(source:Araport11) Ipc01G0017860 AT1G29900.1 carbamoyl phosphate synthetase B Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins. carbamoyl phosphate synthetase B;(source:Araport11) Ipc01G0017850 AT5G17410.1 Spc97 / Spc98 family of spindle pole body (SBP) component 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc01G0017840 AT3G45590.2 splicing endonuclease 1 Encodes a catalytic subunit of tRNA splicing endonuclease. splicing endonuclease 1;(source:Araport11) Ipc01G0017830 AT3G45600.1 tetraspanin3 Member of TETRASPANIN family tetraspanin3;(source:Araport11) Ipc01G0017820 AT5G60210.6 0 Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 5;(source:Araport11) Ipc01G0017810 #N/A #N/A #N/A #N/A Ipc01G0017800 AT5G02960.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc01G0017790 AT2G28510.1 Dof-type zinc finger DNA-binding family protein DOF transcription factor with a conserved zinc finger (ZF) DNA-binding domain. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc01G0017780 AT2G28520.1 vacuolar proton ATPase A1 Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network. The mRNA is cell-to-cell mobile. vacuolar proton ATPase A1;(source:Araport11) Ipc01G0017770 AT3G45620.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0017760 AT3G45660.3 0 Encodes a member of the NAXT NPF subfamily. Major facilitator superfamily protein;(source:Araport11) Ipc01G0017750 AT3G45640.1 mitogen-activated protein kinase 3 Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro. The mRNA is cell-to-cell mobile. mitogen-activated protein kinase 3;(source:Araport11) Ipc01G0017740 AT1G07890.8 ascorbate peroxidase 1 Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. The mRNA is cell-to-cell mobile. ascorbate peroxidase 1;(source:Araport11) Ipc01G0017730 AT2G28840.1 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc01G0017720 AT5G01560.1 lectin receptor kinase a4.3 Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. lectin receptor kinase a4.3;(source:Araport11) Ipc01G0017700 AT3G45770.1 Polyketide synthase, enoylreductase family protein 0 Polyketide synthase, enoylreductase family protein;(source:Araport11) Ipc01G0017710 AT4G20810.1 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein 0 transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein;(source:Araport11) Ipc01G0017690 AT1G07870.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0017680 AT3G45780.2 phototropin 1 Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376. phototropin 1;(source:Araport11) Ipc01G0017670 AT5G60050.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc01G0017660 AT3G55120.1 Chalcone-flavanone isomerase family protein Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. Co-expressed with CHS. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc01G0017650 AT2G28610.1 Homeodomain-like superfamily protein Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0017640 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc01G0017630 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc01G0017620 AT5G02640.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0017610 AT2G37050.4 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0017600 AT1G07710.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc01G0017590 AT3G46200.1 nudix hydrolase homolog 9 Encodes a GDP-d-mannose pyrophosphohydrolase that is involved in the regulation of GDP-d-Man levels affecting ammonium sensitivity via modulation of protein N-glycosylation in the roots. nudix hydrolase homolog 9;(source:Araport11) Ipc01G0017580 AT2G28630.2 0 Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 12;(source:Araport11) Ipc01G0017570 AT2G39380.1 exocyst subunit exo70 family protein H2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H2;(source:Araport11) Ipc01G0017560 AT4G01470.1 tonoplast intrinsic protein 1;3 Encodes AtTIP1;3, functions as water and urea channels in pollen. tonoplast intrinsic protein 1;(source:Araport11) Ipc01G0017550 AT5G59770.1 Protein-tyrosine phosphatase-like, PTPLA 0 Protein-tyrosine phosphatase-like, PTPLA;(source:Araport11) Ipc01G0017540 AT5G59780.3 myb domain protein 59 Encodes a putative transcription factor (MYB59). In roots it is involved in K+/NO3- transport and expression of the NPF7.3 transporter. myb domain protein 59;(source:Araport11) Ipc01G0017530 AT5G59820.1 C2H2-type zinc finger family protein Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. The mRNA is cell-to-cell mobile. C2H2-type zinc finger family protein;(source:Araport11) Ipc01G0017520 AT5G59830.3 0 0 DNA-binding protein;(source:Araport11) Ipc01G0017510 AT5G59840.1 Ras-related small GTP-binding family protein 0 Ras-related small GTP-binding family protein;(source:Araport11) Ipc01G0017500 AT4G01590.3 0 0 DNA-directed RNA polymerase III subunit;(source:Araport11) Ipc01G0017490 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc01G0017480 AT1G07795.1 0 0 forkhead box protein G1;(source:Araport11) Ipc01G0017470 AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0017460 AT2G39570.1 ACT domain-containing protein Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. ACT domain-containing protein;(source:Araport11) Ipc01G0017450 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0017440 AT5G26250.1 Major facilitator superfamily protein Sugar transporter expressed strongly in pollen and pollen tubes. Major facilitator superfamily protein;(source:Araport11) Ipc01G0017430 AT1G07340.1 sugar transporter 2 0 sugar transporter 2;(source:Araport11) Ipc01G0017420 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc01G0017410 AT3G46510.1 plant U-box 13 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13;(source:Araport11) Ipc01G0017400 AT3G55370.1 OBF-binding protein 3 Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. OBF-binding protein 3;(source:Araport11) Ipc01G0017390 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc01G0017380 AT5G59350.3 0 0 transmembrane protein;(source:Araport11) Ipc01G0017370 AT5G59340.1 WUSCHEL related homeobox 2 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain. WUSCHEL related homeobox 2;(source:Araport11) Ipc01G0017360 AT2G37570.1 HSP20-like chaperones superfamily protein encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0017350 AT2G28790.2 0 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc01G0017340 AT1G07645.1 dessication-induced 1VOC superfamily protein Ortholog of HC205/ Xhdsi-1voc from Xerophyta humilis. Member of VOC metalloenzyme superfamily. Not involved in response to abiotic stress, unlike its Xerophyta ortholog. dessication-induced 1VOC superfamily protein;(source:Araport11) Ipc01G0017330 AT3G46450.3 0 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc01G0017320 AT2G28780.1 0 0 P-hydroxybenzoic acid efflux pump subunit;(source:Araport11) Ipc01G0017310 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc01G0017300 AT3G05960.1 sugar transporter 6 Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination. sugar transporter 6;(source:Araport11) Ipc01G0017290 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0017280 AT3G57150.1 homologue of NAP57 Encodes a putative pseudouridine synthase (NAP57). homologue of NAP57;(source:Araport11) Ipc01G0017270 AT2G28840.1 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc01G0017260 AT5G02440.1 0 0 60S ribosomal protein L36;(source:Araport11) Ipc01G0017250 AT5G02420.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc01G0017240 AT3G53750.2 0 Member of the Actin gene family. Expressed in mature pollen. actin 3;(source:Araport11) Ipc01G0017230 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc01G0017220 AT1G07630.1 pol-like 5 Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. pol-like 5;(source:Araport11) Ipc01G0017210 AT3G46550.1 Fasciclin-like arabinogalactan family protein Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.SOS5 is required for normal mucilage adherence to seeds. Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc01G0017200 AT4G10230.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc01G0017190 AT5G02390.3 0 Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc01G0017180 AT3G09390.2 0 metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage metallothionein 2A;(source:Araport11) Ipc01G0017170 AT3G26180.2 cytochrome P450, family 71, subfamily B, polypeptide 20 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 20;(source:Araport11) Ipc01G0017160 AT5G25180.1 cytochrome P450, family 71, subfamily B, polypeptide 14 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 14;(source:Araport11) Ipc01G0017150 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc01G0017140 AT2G39650.1 Protein of unknown function (DUF506) 0 cruciferin (DUF506);(source:Araport11) Ipc01G0017130 AT2G28930.3 protein kinase 1B 0 protein kinase 1B;(source:Araport11) Ipc01G0017120 AT1G13790.2 0 Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). XH/XS domain-containing protein;(source:Araport11) Ipc01G0017110 AT3G48670.3 0 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. XH/XS domain-containing protein;(source:Araport11) Ipc01G0017100 AT3G12550.4 0 Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). XH/XS domain-containing protein;(source:Araport11) Ipc01G0017090 AT3G48670.3 0 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. XH/XS domain-containing protein;(source:Araport11) Ipc01G0017080 AT2G39700.1 expansin A4 putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A4;(source:Araport11) Ipc01G0017070 AT2G32910.1 DCD (Development and Cell Death) domain protein 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc01G0017060 AT2G29050.1 RHOMBOID-like 1 0 RHOMBOID-like 1;(source:Araport11) Ipc01G0017050 AT2G29040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc01G0017040 AT5G59420.1 OSBP(oxysterol binding protein)-related protein 3C 0 OSBP(oxysterol binding protein)-related protein 3C;(source:Araport11) Ipc01G0017030 AT1G07540.1 TRF-like 2 Arabidopsis thaliana telomere-binding protein, putative (At1g07540) TRF-like 2;(source:Araport11) Ipc01G0017020 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc01G0017010 AT2G29060.2 0 0 GRAS family transcription factor;(source:Araport11) Ipc01G0017000 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc01G0016990 AT2G29060.2 0 0 GRAS family transcription factor;(source:Araport11) Ipc01G0016980 AT5G59460.1 scarecrow-like transcription factor 11 (SCL11) 0 scarecrow-like transcription factor 11 (SCL11);(source:Araport11) Ipc01G0016970 AT5G59480.5 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc01G0016960 AT1G07510.1 FTSH protease 10 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10;(source:Araport11) Ipc01G0016950 AT5G59510.1 ROTUNDIFOLIA like 5 0 ROTUNDIFOLIA like 5;(source:Araport11) Ipc01G0016940 AT5G60020.1 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc01G0016930 AT5G59520.1 ZRT/IRT-like protein 2 encodes a metal ion transporter whose expression is regulated by copper. ZRT/IRT-like protein 2;(source:Araport11) Ipc01G0016920 AT2G39720.2 0 Encodes a putative RING-H2 finger protein RHC2a. RING-H2 finger C2A;(source:Araport11) Ipc01G0016910 AT5G59600.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0016900 AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0016890 AT3G46750.1 0 0 low-temperature-induced protein;(source:Araport11) Ipc01G0016880 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc01G0016870 AT2G29380.1 highly ABA-induced PP2C gene 3 0 highly ABA-induced PP2C protein 3;(source:Araport11) Ipc01G0016860 #N/A #N/A #N/A #N/A Ipc01G0016850 AT1G07420.1 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA. The sterol 4alpha-methyl oxidase2 family proteins SMO2-1 and SMO2-2 function partially through effects on auxin accumulation, auxin response and PIN1 expression to regulate embryogenesis in Arabidopsis. sterol 4-alpha-methyl-oxidase 2-1;(source:Araport11) Ipc01G0016840 AT5G59210.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc01G0016830 AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0016820 AT5G59180.1 DNA-directed RNA polymerase II Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7 DNA-directed RNA polymerase II;(source:Araport11) Ipc01G0016810 AT4G09800.1 S18 ribosomal protein encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex S18 ribosomal protein;(source:Araport11) Ipc01G0016800 AT5G59160.3 type one serine/threonine protein phosphatase 2 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. type one serine/threonine protein phosphatase 2;(source:Araport11) Ipc01G0016790 AT2G29410.1 metal tolerance protein B1 member of Zinc transporter (ZAT) family metal tolerance protein B1;(source:Araport11) Ipc01G0016780 AT1G07410.1 RAB GTPase homolog A2B 0 RAB GTPase homolog A2B;(source:Araport11) Ipc01G0016770 AT5G59080.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0016760 AT5G05950.1 maternal effect embryo arrest 60 0 maternal effect embryo arrest 60;(source:Araport11) Ipc01G0016750 AT4G02830.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0016740 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc01G0016730 AT5G59580.1 UDP-glucosyl transferase 76E1 0 UDP-glucosyl transferase 76E1;(source:Araport11) Ipc01G0016720 AT3G06770.2 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0016710 AT3G46660.1 UDP-glucosyl transferase 76E12 0 UDP-glucosyl transferase 76E12;(source:Araport11) Ipc01G0016700 AT5G59020.1 Protein of unknown function (DUF3527) 0 hepatocyte growth factor activator, putative (DUF3527);(source:Araport11) Ipc01G0016690 AT5G59010.1 Protein kinase protein with tetratricopeptide repeat domain 0 kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc01G0016680 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc01G0016670 AT5G23860.2 tubulin beta 8 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile. tubulin beta 8;(source:Araport11) Ipc01G0016660 AT1G07380.2 0 Encodes a neutral ceramidase that is involved in sphingolipid homeostasis and responses to oxidative stress. Neutral/alkaline non-lysosomal ceramidase;(source:Araport11) Ipc01G0016650 AT5G58970.1 uncoupling protein 2 UCP2 and its paralog UCP1 is a member of the PUMP2 family of uncoupling proteins. It functions as a mitochondrial transporter of spartate, glutamate and dicarboxylates. uncoupling protein 2;(source:Araport11) Ipc01G0016640 AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a serine/arginine rich-like protein, SR45a. Involved in the regulation of stress-responsive alternative splicing. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0016630 AT4G00330.2 0 high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2;(source:Araport11) Ipc01G0016620 AT3G46980.3 phosphate transporter 4;3 Encodes an inorganic phosphate transporter (PHT4;3). phosphate transporter 4;(source:Araport11) Ipc01G0016610 AT3G23660.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0016600 AT3G54140.2 0 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source peptide transporter 1;(source:Araport11) Ipc01G0016590 AT3G54140.2 0 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source peptide transporter 1;(source:Araport11) Ipc01G0016580 AT3G54140.2 0 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source peptide transporter 1;(source:Araport11) Ipc01G0016570 AT5G58900.1 Homeodomain-like transcriptional regulator R-R-type MYB protein Homeodomain-like transcriptional regulator;(source:Araport11) Ipc01G0016560 AT3G47040.4 0 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc01G0016550 AT1G07300.1 josephin protein-related 0 josephin protein-like protein;(source:Araport11) Ipc01G0016540 AT3G47070.1 0 0 thylakoid soluble phosphoprotein;(source:Araport11) Ipc01G0016530 AT5G58860.1 cytochrome P450, family 86, subfamily A, polypeptide 1 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue. cytochrome P450, family 86, subfamily A, polypeptide 1;(source:Araport11) Ipc01G0016520 AT5G58850.1 myb domain protein 119 Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119). myb domain protein 119;(source:Araport11) Ipc01G0016510 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0016500 AT2G29690.1 anthranilate synthase 2 Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis. anthranilate synthase 2;(source:Araport11) Ipc01G0016490 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0016480 AT3G47120.2 0 GDS1is a member of the C3H-type zinc finger family of proteins. Mutants display growth defects due to reduced cell number and size. RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc01G0016470 AT5G42235.1 Expressed protein Encodes a defensin-like (DEFL) family protein. Expressed protein;(source:Araport11) Ipc01G0016460 AT2G29890.5 0 Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization. villin-like 1;(source:Araport11) Ipc01G0016450 AT1G07230.1 non-specific phospholipase C1 0 non-specific phospholipase C1;(source:Araport11) Ipc01G0016440 AT5G58750.2 0 Putative PRISE (progesterone 5β-reductase and/or iridoid synthase-like 1,4-enone reductases). NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0016430 AT5G58720.1 smr (Small MutS Related) domain-containing protein 0 smr (Small MutS Related) domain-containing protein;(source:Araport11) Ipc01G0016420 AT5G01410.2 0 Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc01G0016410 AT5G58620.1 zinc finger (CCCH-type) family protein 0 zinc finger (CCCH-type) family protein;(source:Araport11) Ipc01G0016400 AT5G58630.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0016390 AT2G29980.1 fatty acid desaturase 3 Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor. fatty acid desaturase 3;(source:Araport11) Ipc01G0016380 AT1G76390.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0016370 AT1G07175.1 0 0 alternative NAD(P)H dehydrogenase;(source:Araport11) Ipc01G0016360 AT2G30000.1 PHF5-like protein 0 PHF5-like protein;(source:Araport11) Ipc01G0016350 AT5G58660.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0016340 AT5G58610.4 0 0 PHD finger transcription factor;(source:Araport11) Ipc01G0016330 AT5G58600.1 Plant protein of unknown function (DUF828) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein (DUF828);(source:Araport11) Ipc01G0016320 AT3G47340.1 glutamine-dependent asparagine synthase 1 encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. glutamine-dependent asparagine synthase 1;(source:Araport11) Ipc01G0016310 AT3G51800.3 metallopeptidase M24 family protein putative nuclear DNA-binding protein G2p (AtG2) mRNA, metallopeptidase M24 family protein;(source:Araport11) Ipc01G0016300 AT5G58590.1 RAN binding protein 1 Encodes a Ran-binding protein 1 homolog (RanBP1). RAN binding protein 1;(source:Araport11) Ipc01G0016290 AT2G30070.1 potassium transporter 1 Encodes a high affinity potassium transporter. potassium transporter 1;(source:Araport11) Ipc01G0016280 AT1G07110.1 fructose-2,6-bisphosphatase Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase. fructose-2,6-bisphosphatase;(source:Araport11) Ipc01G0016270 AT2G47560.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0016260 AT2G27940.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0016250 AT3G10910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0016240 AT1G30050.1 0 0 tropomyosin;(source:Araport11) Ipc01G0016230 AT2G30080.1 ZIP metal ion transporter family member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess. ZIP metal ion transporter family;(source:Araport11) Ipc01G0016220 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0016210 AT5G58575.2 0 Component of the deubiquitination module of the SAGA complex. SAGA-associated factor-like protein;(source:Araport11) Ipc01G0016200 AT5G58560.1 Phosphatidate cytidylyltransferase family protein FOLK is a farnesol kinase that can phosphorylate farnesol using an NTP donor. It can also phosphorylate geraniol, or geranylgeraniol, but it prefers farnesol in experiments performed using yeast membranes. folk loss-of-function mutants show ABA hypersensitivity in a seed germination assay and the mutants also exhibit abnormal flower development, including extra carpel formation, when subjected to water stress. The mRNA is cell-to-cell mobile. Phosphatidate cytidylyltransferase family protein;(source:Araport11) Ipc01G0016190 AT2G30100.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc01G0016180 AT3G51770.2 tetratricopeptide repeat (TPR)-containing protein Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0016170 AT5G45840.2 Leucine-rich repeat protein kinase family protein Encodes a leucine-rich-repeat RLK that is localized to the plasma membrane of pollen tubes and functions with MIK1/2 as the male receptor of the pollen tube chemo-attractant LURE1.MDIS1 forms a complex with MIK1/2 and binds LURE1. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0016160 AT5G58530.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc01G0016150 AT2G30105.1 0 0 LRR/ubiquitin-like domain protein;(source:Araport11) Ipc01G0016140 AT2G30110.1 ubiquitin-activating enzyme 1 Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. ubiquitin-activating enzyme 1;(source:Araport11) Ipc01G0016130 AT5G58520.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0016120 AT1G07090.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc01G0016110 AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein 0 Ribosomal protein S4 (RPS4A) family protein;(source:Araport11) Ipc01G0016100 AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein 0 Ribosomal protein S4 (RPS4A) family protein;(source:Araport11) Ipc01G0016090 AT5G58480.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0016080 AT1G07060.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0016070 AT2G30130.1 Lateral organ boundaries (LOB) domain family protein Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc01G0016060 AT2G30140.2 UDP-Glycosyltransferase superfamily protein Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0016050 AT2G30140.2 UDP-Glycosyltransferase superfamily protein Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0016040 AT2G30200.1 catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding Malonyl-ACP expressed in developing seeds. Loss of function mutants are embryo lethal and over expression in seeds leads to increased seed oil content. EMBRYO DEFECTIVE 3147;(source:Araport11) Ipc01G0016030 AT1G07010.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc01G0016020 AT5G58460.1 cation/H+ exchanger 25 member of Putative Na+/H+ antiporter family cation/H+ exchanger 25;(source:Araport11) Ipc01G0016010 AT2G30210.1 laccase 3 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 3;(source:Araport11) Ipc01G0016000 AT2G30210.1 laccase 3 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 3;(source:Araport11) Ipc01G0015990 AT5G58450.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0015980 AT5G07120.2 0 Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole. sorting nexin 2B;(source:Araport11) Ipc01G0015970 AT3G62600.1 DNAJ heat shock family protein J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity. DNAJ heat shock family protein;(source:Araport11) Ipc01G0015960 AT2G30230.1 0 0 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc01G0015950 AT5G01710.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc01G0015940 AT2G38470.1 WRKY DNA-binding protein 33 Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. WRKY DNA-binding protein 33;(source:Araport11) Ipc01G0015930 AT5G01720.1 RNI-like superfamily protein RAE1 is an F-box protein component of a SCF-type E3 ligase complex. It is part of an alumium induced regulatory loop: its activity is induced by STOP1 and it in turn ubiquitinates STOP1 which is then targeted for degradation. RNI-like superfamily protein;(source:Araport11) Ipc01G0015920 AT2G30260.1 U2 small nuclear ribonucleoprotein B encodes U2B", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus. U2 small nuclear ribonucleoprotein B;(source:Araport11) Ipc01G0015910 AT5G58410.2 0 0 HEAT/U-box domain-containing protein;(source:Araport11) Ipc01G0015900 AT5G06240.1 embryo defective 2735 0 embryo defective 2735;(source:Araport11) Ipc01G0015890 AT5G07080.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc01G0015880 AT3G08860.1 PYRIMIDINE 4 Encodes a protein that is predicted to have beta-alanine aminotransferase activity. PYRIMIDINE 4;(source:Araport11) Ipc01G0015870 AT2G30280.1 RNA-directed DNA methylation 4 Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development. RNA-directed DNA methylation 4;(source:Araport11) Ipc01G0015860 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0015850 AT2G30300.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0015840 AT2G30320.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc01G0015830 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc01G0015820 AT2G30340.2 0 Lateral Organ Boundaries domain protein. LOB13 promotes lateral root formation. LOB domain-containing protein 13;(source:Araport11) Ipc01G0015810 AT4G25845.1 0 0 oxysterol-binding 4B-like protein;(source:Araport11) Ipc01G0015800 AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0015790 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc01G0015780 AT5G58375.1 Methyltransferase-related protein 0 Methyltransferase-related protein;(source:Araport11) Ipc01G0015770 AT2G30360.1 SOS3-interacting protein 4 Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter. SOS3-interacting protein 4;(source:Araport11) Ipc01G0015760 AT2G30380.1 Plant protein of unknown function (DUF641) 0 MYB family transcription factor;(source:Araport11) Ipc01G0015750 AT2G30395.1 ovate family protein 17 Member of the plant specific ovate protein family of unknown function. ovate family protein 17;(source:Araport11) Ipc01G0015740 AT1G06920.1 ovate family protein 4 Encodes OFP4, a member of the plant specific ovate family proteins. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. OFP4 interacts with KNAT7 to regulate secondary cell wall formation. ovate family protein 4;(source:Araport11) Ipc01G0015730 AT2G40590.1 Ribosomal protein S26e family protein 0 Ribosomal protein S26e family protein;(source:Araport11) Ipc01G0015720 AT5G05280.1 RING/U-box superfamily protein Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway. RING/U-box superfamily protein;(source:Araport11) Ipc01G0015710 AT4G34390.1 extra-large GTP-binding protein 2 0 extra-large GTP-binding protein 2;(source:Araport11) Ipc01G0015700 AT4G32010.2 0 0 HSI2-like 1;(source:Araport11) Ipc01G0015690 AT3G56380.1 response regulator 17 response regulator 17 response regulator 17;(source:Araport11) Ipc01G0015680 AT1G07130.1 Nucleic acid-binding, OB-fold-like protein Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0015670 AT2G30490.1 cinnamate-4-hydroxylase Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development. cinnamate-4-hydroxylase;(source:Araport11) Ipc01G0015660 AT5G58320.5 0 Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the tonoplast membrane. It is expressed in the epidermis of the root meristem and the early expansion zone. Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc01G0015650 AT5G49350.2 Glycine-rich protein family 0 Glycine-rich protein family;(source:Araport11) Ipc01G0015640 AT5G20920.2 eukaryotic translation initiation factor 2 beta subunit protein synthesis initiation factor eIF2 beta eukaryotic translation initiation factor 2 beta subunit;(source:Araport11) Ipc01G0015630 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc01G0015620 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc01G0015610 AT2G30520.1 Phototropic-responsive NPH3 family protein light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc01G0015600 AT1G06840.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0015590 AT5G01970.1 0 0 unknown protein;(source:TAIR10) Ipc01G0015580 AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein SCC4 is a tetratricopeptide repeat containing protein and a likely component of a plant cohesion loading complex along with its partner SSC2 It is expressed primarily in dividing cells. Loss of function mutants are embryo lethal, arresting by globular stage. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0015570 AT5G58240.1 FRAGILE HISTIDINE TRIAD Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities. FRAGILE HISTIDINE TRIAD;(source:Araport11) Ipc01G0015560 AT1G31360.8 0 Encodes a (d)NTP-dependent 3 Prime->5 Prime DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. RECQ helicase L2;(source:Araport11) Ipc01G0015550 AT1G09575.2 0 Mitochondrial calcium channel. calcium uniporter-like protein (DUF607);(source:Araport11) Ipc01G0015540 AT5G10860.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc01G0015530 AT3G20000.1 translocase of the outer mitochondrial membrane 40 Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore. The mRNA is cell-to-cell mobile. translocase of the outer mitochondrial membrane 40;(source:Araport11) Ipc01G0015520 AT3G25530.1 glyoxylate reductase 1 Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance. glyoxylate reductase 1;(source:Araport11) Ipc01G0015510 AT4G02600.2 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc01G0015500 AT4G12740.2 0 0 HhH-GPD base excision DNA repair family protein;(source:Araport11) Ipc01G0015490 AT2G04039.1 0 NdhV is loosely associated with the NDH complex and is required for stabilizing NDH subcomplexes A and E. DUF2996 family protein;(source:Araport11) Ipc01G0015480 AT4G12770.1 Chaperone DnaJ-domain superfamily protein Negative regulation of growth and endocytosis, most likely as a result of inhibition of the recruitment of clathrin to endocytic pits. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0015470 AT3G25520.3 0 Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. It also plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development. ribosomal protein L5;(source:Araport11) Ipc01G0015460 AT4G12790.6 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0015450 AT5G48340.4 0 0 hypothetical protein;(source:Araport11) Ipc01G0015440 AT2G39780.1 ribonuclease 2 Encodes the main endoribonuclease activity in plant cells and localizes to the endoplasmic reticulum (ER), ER-derived structures, and vacuoles. It is essential for normal ribosomal RNA recycling. The mRNA is cell-to-cell mobile. ribonuclease 2;(source:Araport11) Ipc01G0015430 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc01G0015420 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc01G0015410 AT5G45277.1 0 0 inhibitor of trypsin/hageman factor-like protein;(source:Araport11) Ipc01G0015400 AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc01G0015390 AT1G50380.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc01G0015380 AT3G07510.2 0 0 maternal effect embryo arrest protein;(source:Araport11) Ipc01G0015370 AT3G07510.2 0 0 maternal effect embryo arrest protein;(source:Araport11) Ipc01G0015360 AT3G07510.2 0 0 maternal effect embryo arrest protein;(source:Araport11) Ipc01G0015350 AT3G25430.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0015340 AT3G25410.1 Sodium Bile acid symporter family 0 Sodium Bile acid symporter family;(source:Araport11) Ipc01G0015330 AT2G43060.1 ILI1 binding bHLH 1 0 ILI1 binding bHLH 1;(source:Araport11) Ipc01G0015320 AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. Actin binding Calponin homology (CH) domain-containing protein;(source:Araport11) Ipc01G0015310 AT5G48480.1 Lactoylglutathione lyase / glyoxalase I family protein 0 Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc01G0015300 AT1G24577.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0015290 AT3G25400.1 0 0 dCTP pyrophosphatase-like protein;(source:Araport11) Ipc01G0015280 AT3G07410.1 RAB GTPase homolog A5B 0 RAB GTPase homolog A5B;(source:Araport11) Ipc01G0015270 AT3G07400.1 lipase class 3 family protein 0 lipase class 3 family protein;(source:Araport11) Ipc01G0015260 AT3G25290.2 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc01G0015250 AT4G18100.1 Ribosomal protein L32e 0 Ribosomal protein L32e;(source:Araport11) Ipc01G0015240 AT3G25250.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Arabidopsis protein kinase The mRNA is cell-to-cell mobile. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc01G0015230 AT3G07370.1 carboxyl terminus of HSC70-interacting protein Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. carboxyl terminus of HSC70-interacting protein;(source:Araport11) Ipc01G0015220 AT3G07360.1 plant U-box 9 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 9;(source:Araport11) Ipc01G0015210 AT3G07350.1 Protein of unknown function (DUF506) 0 sulfate/thiosulfate import ATP-binding protein, putative (DUF506);(source:Araport11) Ipc01G0015200 AT5G59240.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc01G0015190 AT3G07330.2 0 encodes a gene similar to cellulose synthase Cellulose-synthase-like C6;(source:Araport11) Ipc01G0015180 AT3G07320.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0015170 AT3G07320.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0015160 AT3G07310.1 Protein of unknown function (DUF760) 0 phosphoserine aminotransferase, putative (DUF760);(source:Araport11) Ipc01G0015150 AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein 0 Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc01G0015140 AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein 0 Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc01G0015130 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc01G0015120 AT5G28010.2 0 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc01G0015110 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc01G0015100 AT2G26040.1 PYR1-like 2 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYR1-like 2;(source:Araport11) Ipc01G0015090 AT1G11475.1 RNA polymerases N / 8 kDa subunit Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit;(source:Araport11) Ipc01G0015080 AT4G13040.8 0 Encodes a member of the AP2/EREBP transcription factor family that has only one AP2 domain. It is a positive regulator of disease defense that functions upstream of SA accumulation. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0015070 AT3G25130.1 0 0 acidic leucine-rich nuclear phosphoprotein 32 family B protein;(source:Araport11) Ipc01G0015060 AT3G25150.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc01G0015050 AT3G25110.1 fatA acyl-ACP thioesterase Encodes a FatA acyl-ACP thioesterase fatA acyl-ACP thioesterase;(source:Araport11) Ipc01G0015040 AT3G25070.1 RPM1 interacting protein 4 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. The mRNA is cell-to-cell mobile. RPM1 interacting protein 4;(source:Araport11) Ipc01G0015030 AT3G07170.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc01G0015020 AT1G04850.2 0 0 ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11) Ipc01G0015010 AT3G07140.1 GPI transamidase component Gpi16 subunit family protein 0 GPI transamidase component Gpi16 subunit family protein;(source:Araport11) Ipc01G0015000 AT3G24840.6 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc01G0014990 AT3G24830.1 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc01G0014980 AT2G32720.1 cytochrome B5 isoform B Participates with ELO2 in VLCFA synthesis. cytochrome B5 isoform B;(source:Araport11) Ipc01G0014970 AT3G24830.1 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc01G0014960 AT1G29195.1 0 0 phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein;(source:Araport11) Ipc01G0014950 AT5G48800.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc10G0000130 AT3G52240.1 0 0 transcriptional regulator ATRX;(source:Araport11) Ipc10G0000120 AT2G42270.1 U5 small nuclear ribonucleoprotein helicase Similar to yast Brr2p DEAD/DExH box ATP-dependent RNA helicase. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc10G0000110 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0000100 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0000090 #N/A #N/A #N/A #N/A Ipc10G0000080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0011990 AT1G01140.1 CBL-interacting protein kinase 9 Encodes a CBL-interacting protein kinase with similarity to SOS2 CBL-interacting protein kinase 9;(source:Araport11) Ipc01G0011980 AT3G18750.5 0 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 6;(source:Araport11) Ipc01G0011970 AT1G01225.1 NC domain-containing protein-related 0 NC domain-containing protein-like protein;(source:Araport11) Ipc01G0011960 AT2G46580.1 Pyridoxamine 5'-phosphate oxidase family protein 0 Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11) Ipc01G0011950 AT2G46560.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0011930 AT3G47890.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc01G0011940 AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0011920 AT1G01260.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH13 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH14 and bHLH17 to negatively regulate jasmonate responses. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0011910 AT1G01290.2 cofactor of nitrate reductase and xanthine dehydrogenase 3 COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria cofactor of nitrate reductase and xanthine dehydrogenase 3;(source:Araport11) Ipc01G0011900 AT1G01300.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0011890 AT3G61800.2 0 0 ENTH/VHS protein;(source:Araport11) Ipc01G0011880 AT3G61780.1 embryo defective 1703 0 embryo defective 1703;(source:Araport11) Ipc01G0011870 AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc01G0011860 AT5G42080.4 0 Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. dynamin-like protein;(source:Araport11) Ipc01G0011850 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc01G0011840 AT3G61750.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain 0 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein;(source:Araport11) Ipc01G0011830 AT1G01320.3 0 Encodes REDUCED CHLOROPLAST COVERAGE 1 (REC1). Located in the nucleus and cytosol. Contributes to establishing the size of the chloroplast compartment. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0011820 AT3G61740.2 SET domain protein 14 Encodes SET domain containing protein that acts redundantly with ATX4/5 to regulate histone H3-K4 methylation. SET domain protein 14;(source:Araport11) Ipc01G0011810 AT3G61730.1 reduced male fertility Encodes a nuclear localized F-box protein that is involved in tapetal layer degeneration and pollen development. Interacts with ASK1 and that interaction is mediated by the F-box domain. reduced male fertility;(source:Araport11) Ipc01G0011800 AT2G46495.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0011790 AT5G53130.1 cyclic nucleotide gated channel 1 member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1;(source:Araport11) Ipc01G0011780 AT5G53130.1 cyclic nucleotide gated channel 1 member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1;(source:Araport11) Ipc01G0011770 AT3G61690.3 0 Putative TNAase nucleotidyltransferase;(source:Araport11) Ipc01G0011760 AT3G61680.3 0 PLIP1 encodes a plastid localized phospholipase A1 involved in seed oil biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0011750 AT1G01360.1 regulatory component of ABA receptor 1 Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor. The mRNA is cell-to-cell mobile. regulatory component of ABA receptor 1;(source:Araport11) Ipc01G0011740 AT4G01030.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc01G0011730 AT1G03100.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0011720 AT4G01040.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc01G0011710 AT4G01050.1 thylakoid rhodanese-like hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow. The mRNA is cell-to-cell mobile. thylakoid rhodanese-like protein;(source:Araport11) Ipc01G0011700 AT5G53200.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0011690 AT4G11070.1 WRKY family transcription factor member of WRKY Transcription Factor; Group III WRKY family transcription factor;(source:Araport11) Ipc01G0011680 AT2G45400.1 NAD(P)-binding Rossmann-fold superfamily protein involved in the regulation of brassinosteroid metabolic pathway NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0011670 AT4G27250.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0011660 AT4G01070.1 UDP-Glycosyltransferase superfamily protein the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0011650 AT4G01070.1 UDP-Glycosyltransferase superfamily protein the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0011640 AT1G01430.1 TRICHOME BIREFRINGENCE-LIKE 25 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers.Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 25;(source:Araport11) Ipc01G0011630 AT2G46380.2 0 0 extra-large G-like protein, putative (DUF3133);(source:Araport11) Ipc01G0011620 AT4G01100.1 adenine nucleotide transporter 1 Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration. adenine nucleotide transporter 1;(source:Araport11) Ipc01G0011610 AT2G46340.2 0 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light. SPA (suppressor of phyA-105) protein family;(source:Araport11) Ipc01G0011600 AT1G64300.2 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc01G0011590 AT5G41760.2 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc01G0011580 AT5G41761.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0011570 AT4G27940.1 manganese tracking factor for mitochondrial SOD2 0 manganese tracking factor for mitochondrial SOD2;(source:Araport11) Ipc01G0011560 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc01G0011550 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc01G0011540 AT2G46270.3 0 encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3??s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. G-box binding factor 3;(source:Araport11) Ipc01G0011530 AT4G01130.3 0 GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0011520 AT4G01130.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0011510 AT4G01130.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0011500 AT4G01150.1 0 0 CURVATURE THYLAKOID 1A-like protein;(source:Araport11) Ipc01G0011490 AT2G04520.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0011480 AT5G04720.1 ADR1-like 2 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. The mRNA is cell-to-cell mobile. ADR1-like 2;(source:Araport11) Ipc01G0011470 AT5G44510.3 0 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc01G0011460 AT3G61600.1 POZ/BTB containin G-protein 1 POZ/BTB containing-protein AtPOB1. Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. The mRNA is cell-to-cell mobile. POZ/BTB containin G-protein 1;(source:Araport11) Ipc01G0011450 AT5G41620.1 0 0 intracellular protein transporter USO1-like protein;(source:Araport11) Ipc01G0011440 AT3G61590.1 Galactose oxidase/kelch repeat superfamily protein F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0011430 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011420 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011410 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011400 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011390 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011380 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc01G0011370 AT4G01210.1 glycosyl transferase family 1 protein 0 glycosyl transferase family 1 protein;(source:Araport11) Ipc01G0011360 AT4G01220.1 Nucleotide-diphospho-sugar transferase family protein Encodes MGP4 (MALE GAMETOPHYTE DEFECTIVE 4), a rhamnogalacturonan II xylosyltransferase important for growth of pollen tubes and roots. Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc01G0011350 AT2G46225.1 ABI-1-like 1 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins. ABI-1-like 1;(source:Araport11) Ipc01G0011340 AT2G46220.1 Uncharacterized conserved protein (DUF2358) 0 DUF2358 family protein (DUF2358);(source:Araport11) Ipc01G0011330 AT2G46180.1 golgin candidate 4 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC4 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (169 aa) portion of the protein. golgin Putative 4;(source:Araport11) Ipc01G0011320 AT4G11220.1 VIRB2-interacting protein 2 0 VIRB2-interacting protein 2;(source:Araport11) Ipc01G0011310 AT1G01470.1 Late embryogenesis abundant protein Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against desiccation. Late embryogenesis abundant protein;(source:Araport11) Ipc01G0011300 AT1G14620.1 decoy 0 decoy;(source:Araport11) Ipc01G0011290 AT4G01250.1 WRKY family transcription factor AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence. WRKY family transcription factor;(source:Araport11) Ipc01G0011280 AT3G50950.2 HOPZ-ACTIVATED RESISTANCE 1 Encodes a canonical CC-type NLR protein that is required for the recognition of the T3SE HopZ1a from the pathogenic bacteria P. syringae. HOPZ-ACTIVATED RESISTANCE 1;(source:Araport11) Ipc01G0011270 AT1G01490.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc01G0011260 AT5G63540.2 Domain of unknown function (DUF1767) Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. recQ-mediated instability protein (DUF1767);(source:Araport11) Ipc01G0011250 AT1G01500.1 Erythronate-4-phosphate dehydrogenase family protein 0 Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11) Ipc01G0011240 AT5G64130.1 cAMP-regulated phosphoprotein 19-related protein 0 cAMP-regulated phosphoprotein 19-related protein;(source:Araport11) Ipc01G0011230 AT1G01510.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. It has been shown to localize to cytosolic stress granules and is involved in their formation. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0011220 AT4G01280.2 Homeodomain-like superfamily protein RVE5 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0011210 AT4G01290.2 0 Protein with evolutionarily conserved eIF4E-binding motif in its N-terminal domain that can form mRNA cap?binding complexes and has the potential for regulating gene expression as a translation factor associated plant-specific cell cycle regulator. chorismate synthase;(source:Araport11) Ipc01G0011200 AT4G01310.1 Ribosomal L5P family protein 0 Ribosomal L5P family protein;(source:Araport11) Ipc01G0011190 AT4G01370.1 MAP kinase 4 Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. The mRNA is cell-to-cell mobile. MAP kinase 4;(source:Araport11) Ipc01G0011180 AT2G46080.1 0 Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal. BPS1-like protein;(source:Araport11) Ipc01G0011170 AT1G01540.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0011160 AT3G50950.2 HOPZ-ACTIVATED RESISTANCE 1 Encodes a canonical CC-type NLR protein that is required for the recognition of the T3SE HopZ1a from the pathogenic bacteria P. syringae. HOPZ-ACTIVATED RESISTANCE 1;(source:Araport11) Ipc01G0011150 AT4G01320.1 Peptidase family M48 family protein CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum. Peptidase family M48 family protein;(source:Araport11) Ipc01G0011140 AT4G00300.1 fringe-related protein AT4G00300 has been split into two loci based on new cDNA evidence provided by Aleksander Riise Hansen of University of Copenhagen: AT4G00300.2 becomes AT4G00300.1; a new locus AT4G00295 is created. See comments field for AT4G00295 annotation. receptor-like kinase;(source:Araport11) Ipc01G0011130 AT3G61480.2 0 0 Quinoprotein amine dehydrogenase, beta chain-like;(source:Araport11) Ipc01G0011120 AT3G61460.1 brassinosteroid-responsive RING-H2 Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. brassinosteroid-responsive RING-H2;(source:Araport11) Ipc01G0011110 AT4G23470.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc01G0011100 AT2G46060.1 transmembrane protein-related 0 transmembrane protein-like protein;(source:Araport11) Ipc01G0011090 AT1G63800.1 ubiquitin-conjugating enzyme 5 0 ubiquitin-conjugating enzyme 5;(source:Araport11) Ipc01G0011080 AT3G61440.1 cysteine synthase C1 Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. The mRNA is cell-to-cell mobile. cysteine synthase C1;(source:Araport11) Ipc01G0011070 AT4G00355.3 0 Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network. mesoderm induction early response protein;(source:Araport11) Ipc01G0011060 AT2G45970.1 cytochrome P450, family 86, subfamily A, polypeptide 8 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems. cytochrome P450, family 86, subfamily A, polypeptide 8;(source:Araport11) Ipc01G0011050 AT4G00370.1 Major facilitator superfamily protein Encodes an inorganic phosphate transporter (PHT4;4) that can transport ascorbate and is located in the chloroplast envelope membrane. It has been shown to play a role in the xanthophyll cycle during photosynthesis and may be required for tolerance to strong light stress. Major facilitator superfamily protein;(source:Araport11) Ipc01G0011040 AT3G61415.2 SKP1-like 21 0 SKP1-like 21;(source:Araport11) Ipc01G0011030 AT1G01650.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 0 SIGNAL PEPTIDE PEPTIDASE-LIKE 4;(source:Araport11) Ipc01G0011020 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc01G0011010 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc01G0011000 AT4G00440.5 0 0 GPI-anchored adhesin-like protein, putative (DUF3741);(source:Araport11) Ipc01G0010990 AT4G00450.3 0 Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype. RNA polymerase II transcription mediator;(source:Araport11) Ipc01G0010980 AT1G01700.1 RHO guanyl-nucleotide exchange factor 2 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 2;(source:Araport11) Ipc01G0010970 AT4G00467.2 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0010960 AT4G00490.1 beta-amylase 2 Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. It forms a tetramer whose activity requires K+ and exhibits sigmoidal kinetics Mutants of BAM2 have no visible phenotype. beta-amylase 2;(source:Araport11) Ipc01G0010950 AT2G45880.1 beta-amylase 7 Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays. beta-amylase 7;(source:Araport11) Ipc01G0010940 AT3G49050.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0010930 AT4G12020.8 0 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002,7(7):301. protein kinase family protein;(source:Araport11) Ipc01G0010920 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0010910 AT5G59500.2 0 0 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase;(source:Araport11) Ipc01G0010900 AT1G01710.1 Acyl-CoA thioesterase family protein 0 acyl-CoA thioesterase II;(source:Araport11) Ipc01G0010890 AT4G18950.2 0 BHP1 is a Raf-like protein kinase involved in mediating blue light dependent stomatal opening. Integrin-linked protein kinase family;(source:Araport11) Ipc01G0010880 AT3G61320.1 Bestrophin-like protein Encodes a bestrophin-like protein (Best1). Located in the stroma thylakoid membrane. Functions as a chloride ion channel. Proposed to modulate proton motive force partitioning by mediating chloride ion influx in the thylakoid lumen. Major isoform (based on transcript analysis), redundant function with AtBest2. Bestrophin-like protein;(source:Araport11) Ipc01G0010870 AT1G01730.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0010860 AT2G45860.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0010850 AT2G45850.2 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc01G0010840 AT5G44510.4 0 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc01G0010830 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc01G0010820 AT1G31850.4 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0010810 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc01G0010800 AT5G48620.6 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0010790 AT5G44510.4 0 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc01G0010770 AT2G45850.2 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc01G0010780 AT1G63860.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc01G0010760 AT5G04720.1 ADR1-like 2 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. The mRNA is cell-to-cell mobile. ADR1-like 2;(source:Araport11) Ipc01G0010750 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc01G0010740 AT1G01750.1 actin depolymerizing factor 11 0 actin depolymerizing factor 11;(source:Araport11) Ipc01G0010730 AT5G23850.1 Arabidopsis thaliana protein of unknown function (DUF821) 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc01G0010720 AT2G45830.4 0 0 downstream target of AGL15 2;(source:Araport11) Ipc01G0010710 AT1G01760.4 0 0 denosine deaminases acting on tRNA;(source:Araport11) Ipc01G0010700 AT3G61260.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc01G0010690 AT3G61250.1 myb domain protein 17 LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family. myb domain protein 17;(source:Araport11) Ipc01G0010680 AT3G61230.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc01G0010670 AT4G00630.1 K+ efflux antiporter 2 Encodes a K(+)/H(+) antiporter that modulates monovalent cation and pH homeostasis in plant chloroplasts or plastids. K+ efflux antiporter 2;(source:Araport11) Ipc01G0010660 AT4G00620.1 Amino acid dehydrogenase family protein 0 Amino acid dehydrogenase family protein;(source:Araport11) Ipc01G0010650 AT4G00590.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 0 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc01G0010640 AT4G05030.2 0 0 Copper transport protein family;(source:Araport11) Ipc01G0010630 AT2G45790.1 phosphomannomutase Encodes a cytoplasmic phosphomannomutase, involved in ascorbate biosynthesis phosphomannomutase;(source:Araport11) Ipc01G0010620 AT4G00570.1 NAD-dependent malic enzyme 2 Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day. NAD-dependent malic enzyme 2;(source:Araport11) Ipc01G0010610 AT4G00560.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0010600 AT4G21820.1 binding;calmodulin binding 0 binding / calmodulin binding protein;(source:Araport11) Ipc01G0010590 AT5G63370.5 0 CDKG1 interacts with the splicing factor RSZ33 to regulate proper splicing of Cals5 Pre-mRNA. Protein kinase superfamily protein;(source:Araport11) Ipc01G0010580 AT4G00550.2 0 encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane. digalactosyl diacylglycerol deficient 2;(source:Araport11) Ipc01G0010570 AT5G61930.2 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 3 APO RNA-binding protein (DUF794);(source:Araport11) Ipc01G0010560 AT2G45500.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc01G0010550 AT2G45510.1 cytochrome P450, family 704, subfamily A, polypeptide 2 member of CYP704A cytochrome P450, family 704, subfamily A, polypeptide 2;(source:Araport11) Ipc01G0010540 AT2G45540.6 0 0 WD-40 repeat family protein / beige-like protein;(source:Araport11) Ipc01G0010530 AT3G61050.2 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0010520 AT2G45590.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0010510 AT2G45600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0010500 AT2G45610.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0010490 AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein Hydroxyphenylpyruvate reductase (HPPR) family member with low activity. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc01G0010480 AT3G61130.1 galacturonosyltransferase 1 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase 1;(source:Araport11) Ipc01G0010470 AT2G45660.1 AGAMOUS-like 20 Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA. AGAMOUS-like 20;(source:Araport11) Ipc01G0010460 AT2G42010.1 phospholipase D beta 1 phospholipase D (PLDbeta) phospholipase D beta 1;(source:Araport11) Ipc01G0010450 AT4G00770.1 0 0 DUF4378 domain protein;(source:Araport11) Ipc01G0010440 AT4G25500.4 arginine/serine-rich splicing factor 35 Encodes an arginine/serine-rich splicing factor. The transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RS40 binds to HYL1 and co-localizes to the nuclear dicing body. Along with RS41, it appears to be involved in pri-miRNA processing and miRNA biogenesis (DOI:10.1093/nar/gkv751). arginine/serine-rich splicing factor 35;(source:Araport11) Ipc01G0010430 AT2G45720.5 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0010420 AT2G45740.3 peroxin 11D member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation. The mRNA is cell-to-cell mobile. peroxin 11D;(source:Araport11) Ipc01G0010410 AT4G00755.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0010400 AT4G00750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0010390 AT1G66400.1 calmodulin like 23 Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23;(source:Araport11) Ipc01G0010380 AT4G16015.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0010370 AT3G61140.1 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development. COP9 signalosome complex subunit 1;(source:Araport11) Ipc01G0010360 AT4G00740.2 0 Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0010350 AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development. Loss of function mutants have increased cell wall polysaccharide content. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc01G0010340 AT4G00720.1 shaggy-like protein kinase 32 Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway. shaggy-like protein kinase 32;(source:Araport11) Ipc01G0010330 AT3G61170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0010320 AT3G61180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0010310 AT2G45760.1 BON association protein 2 encodes a protein that is similar to BONZAI1-binding protein BAP1. BON association protein 2;(source:Araport11) Ipc01G0010300 AT3G60900.1 FASCICLIN-like arabinogalactan-protein 10 0 FASCICLIN-like arabinogalactan-protein 10;(source:Araport11) Ipc01G0010290 AT3G60890.2 protein binding 0 binding protein;(source:Araport11) Ipc01G0010280 AT1G01950.1 armadillo repeat kinesin 2 Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules. armadillo repeat kinesin 2;(source:Araport11) Ipc01G0010270 AT2G45430.1 AT-hook motif nuclear-localized protein 22 Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis. AT-hook motif nuclear-localized protein 22;(source:Araport11) Ipc01G0010260 AT3G60860.1 SEC7-like guanine nucleotide exchange family protein Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. The mRNA is cell-to-cell mobile. SEC7-like guanine nucleotide exchange family protein;(source:Araport11) Ipc01G0010250 AT2G45420.1 LOB domain-containing protein 18 0 LOB domain-containing protein 18;(source:Araport11) Ipc01G0010240 AT5G38340.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc01G0010230 AT1G54680.3 0 0 translation initiation factor 3 subunit I;(source:Araport11) Ipc01G0010220 AT5G17880.2 0 Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae. disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0010210 AT3G60850.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0010200 AT5G51600.1 Microtubule associated protein (MAP65/ASE1) family protein Mutant has defective roots. Essential for giant cell ontogenesis. Role in organizing the mitotic microtubule array during both early and late mitosis in all plant organs. Microtubule associated protein (MAP65/ASE1) family protein;(source:Araport11) Ipc01G0010190 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc01G0010180 AT1G12390.1 Cornichon family protein 0 Cornichon family protein;(source:Araport11) Ipc01G0010170 AT1G48050.1 Ku80 family protein Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation. Ku80 family protein;(source:Araport11) Ipc01G0010160 AT4G25340.1 FK506 BINDING PROTEIN 53 Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression. FK506 BINDING PROTEIN 53;(source:Araport11) Ipc01G0010150 AT2G02390.1 glutathione S-transferase zeta 1 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism. glutathione S-transferase zeta 1;(source:Araport11) Ipc01G0010140 AT1G12360.1 Sec1/munc18-like (SM) proteins superfamily encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis. Sec1/munc18-like (SM) proteins superfamily;(source:Araport11) Ipc01G0010130 AT2G45400.1 NAD(P)-binding Rossmann-fold superfamily protein involved in the regulation of brassinosteroid metabolic pathway NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0010120 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc01G0010110 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0010100 AT3G21120.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0010090 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0010080 AT3G16210.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0010070 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc01G0010060 AT2G45380.3 0 0 myeloid leukemia factor;(source:Araport11) Ipc01G0010050 AT4G27595.2 0 Encodes a microtubule-associated protein. WEB family protein (DUF827);(source:Araport11) Ipc01G0010040 AT2G45350.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-E subfamily) with 11 pentatricopeptide (PPR) repeats. The protein is involved in RNA editing of the initiation codon of ndhD in the chloroplast. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0010030 AT2G45340.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0010020 AT2G45360.1 Protein of unknown function (DUF1442) 0 ankyrin repeat/KH domain protein (DUF1442);(source:Araport11) Ipc01G0010010 AT4G00110.1 UDP-D-glucuronate 4-epimerase 3 Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. UDP-D-glucuronate 4-epimerase 3;(source:Araport11) Ipc01G0010000 AT2G45290.2 0 0 Transketolase;(source:Araport11) Ipc01G0009990 AT2G45280.1 RAS associated with diabetes protein 51C Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions. RAS associated with diabetes protein 51C;(source:Araport11) Ipc01G0009980 AT2G45270.1 glycoprotease 1 Mitochondrial protein essential for embryo development. glycoprotease 1;(source:Araport11) Ipc01G0009970 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc01G0009960 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc01G0009950 AT3G47380.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor that is involved in resistance to Botrytis cinerea. Affects PME activity during infection to prevent disease. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc01G0009940 AT5G59440.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0009930 AT3G60740.1 ARM repeat superfamily protein Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization. ARM repeat superfamily protein;(source:Araport11) Ipc01G0009920 AT2G45240.1 methionine aminopeptidase 1A Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development. methionine aminopeptidase 1A;(source:Araport11) Ipc01G0009910 AT3G22935.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0009900 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0009890 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0009880 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0009870 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0009860 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0009850 AT3G60690.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc01G0009840 AT3G60670.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc01G0009830 AT4G00170.1 Plant VAMP (vesicle-associated membrane protein) family protein 0 Plant VAMP (vesicle-associated membrane protein) family protein;(source:Araport11) Ipc01G0009820 AT1G62620.1 Flavin-binding monooxygenase family protein 0 Flavin-binding monooxygenase family protein;(source:Araport11) Ipc01G0009810 AT3G60660.1 0 0 spindle/kinetochore-associated-like protein;(source:Araport11) Ipc01G0009800 AT3G60650.1 0 Encodes a peptide involved in the regulation of lateral root development and root growth pattern. transmembrane protein;(source:Araport11) Ipc01G0009790 AT4G00150.1 GRAS family transcription factor Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization. GRAS family transcription factor;(source:Araport11) Ipc01G0009780 AT2G45150.3 cytidinediphosphate diacylglycerol synthase 4 0 cytidinediphosphate diacylglycerol synthase 4;(source:Araport11) Ipc01G0009770 AT2G45140.1 plant VAP homolog 12 Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. The mRNA is cell-to-cell mobile. plant VAP homolog 12;(source:Araport11) Ipc01G0009760 AT3G45020.4 0 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc01G0009750 AT2G45130.1 SPX domain gene 3 Expression is upregulated in the shoot of cax1/cax3 mutant. SPX domain protein 3;(source:Araport11) Ipc01G0009740 AT3G60580.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc01G0009730 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0009720 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0009710 AT1G02040.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc01G0009700 AT1G65680.1 expansin B2 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B2;(source:Araport11) Ipc01G0009690 AT4G00050.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0009680 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0009670 AT5G51380.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc01G0009660 AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein Sec61 Beta Subunit Preprotein translocase Sec, Sec61-beta subunit protein;(source:Araport11) Ipc01G0009650 AT1G02080.2 transcription regulators Acts as scaffold protein in the CCR4-NOT complex, by interacting with various NOT proteins and CAF1. transcription regulator;(source:Araport11) Ipc01G0009640 AT3G60530.1 GATA transcription factor 4 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 4;(source:Araport11) Ipc01G0009630 AT3G20050.1 T-complex protein 1 alpha subunit Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). T-complex protein 1 alpha subunit;(source:Araport11) Ipc01G0009620 AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc01G0009610 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0009600 AT3G60520.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc01G0009590 AT1G02065.1 squamosa promoter binding protein-like 8 Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. squamosa promoter binding protein-like 8;(source:Araport11) Ipc01G0009580 AT5G43330.1 Lactate/malate dehydrogenase family protein predicted to encode a cytosolic malate dehydrogenase. The mRNA is cell-to-cell mobile. Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc01G0009570 AT3G60510.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc01G0009560 AT2G45030.1 Translation elongation factor EFG/EF2 protein 0 Translation elongation factor EFG/EF2 protein;(source:Araport11) Ipc01G0009550 AT2G44980.3 0 0 SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc01G0009540 AT2G44940.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0009530 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc01G0009520 AT3G60460.1 myb-like HTH transcriptional regulator family protein Encodes an R2R3 myb transcription factor that is required for male gamete formation, specifically for entry of the generative cell into mitosis. Specifically expressed in the male germline. myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc01G0009510 AT4G00026.1 0 Encodes SD3 (Segregation Distortion 3), a protein with high similarity to yeast translocase on the inner mitochondrial membrane 21 (TIM21). sd3 mutants show seedling-lethal phenotype in light-grown seedlings and shorter hypocotyls in dark-grown seedlings. SD3 overexpression plants show increase in cell number and cell size, as well as elevated ATP level. import inner membrane translocase subunit;(source:Araport11) Ipc01G0009500 AT3G60480.1 0 0 StAR lipid transfer-like protein;(source:Araport11) Ipc01G0009490 AT1G11580.1 methylesterase PCR A 0 methylesterase PCR A;(source:Araport11) Ipc01G0009480 AT2G19690.1 phospholipase A2-beta Encodes one of the four Arabidopsis phospholipase PLA2 parologs: AT2G06925 (PLA2-ALPHA), AT2G19690 (PLA2-BETA), AT4G29460 (PLA2-GAMMA) and AT4G29470 (PLA2-DELTA). Involved in pollen development and germination and tube growth. Also involved in stomatal opening in response to light. phospholipase A2-beta;(source:Araport11) Ipc01G0009470 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0009460 AT5G15270.2 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc01G0009450 AT4G16780.1 homeobox protein 2 Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. The mRNA is cell-to-cell mobile. homeobox protein 2;(source:Araport11) Ipc01G0009440 AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc01G0009430 AT1G05940.4 0 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. cationic amino acid transporter 9;(source:Araport11) Ipc01G0009420 AT2G44900.2 0 ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings. ARABIDILLO-1;(source:Araport11) Ipc01G0009410 AT4G37440.3 0 0 hypothetical protein;(source:Araport11) Ipc01G0009400 AT4G37445.1 0 0 calcium ion-binding protein;(source:Araport11) Ipc01G0009390 AT2G44840.1 ethylene-responsive element binding factor 13 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene-responsive element binding factor 13;(source:Araport11) Ipc01G0009380 AT5G46930.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc01G0009370 AT4G02250.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc01G0009360 AT2G44840.1 ethylene-responsive element binding factor 13 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene-responsive element binding factor 13;(source:Araport11) Ipc01G0009350 AT1G02090.1 Proteasome component (PCI) domain protein encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype. Proteasome component (PCI) domain protein;(source:Araport11) Ipc01G0009340 AT4G08580.2 0 0 microfibrillar-associated protein-like protein;(source:Araport11) Ipc01G0009330 AT1G19650.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc01G0009320 AT1G02100.3 Leucine carboxyl methyltransferase 0 Leucine carboxyl methyltransferase;(source:Araport11) Ipc01G0009310 AT3G60320.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11) Ipc01G0009300 AT2G44830.3 0 AGCVIII kinase involved in the pulse-induced first positive phototropism. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with BRX, thereby timing PPSE differentiation. Activates PIN-mediated auxin efflux. Protein kinase superfamily protein;(source:Araport11) Ipc01G0009290 AT1G02120.1 GRAM domain family protein Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system. The mRNA is cell-to-cell mobile. GRAM domain family protein;(source:Araport11) Ipc01G0009280 AT1G02130.1 RAS 5 Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5;(source:Araport11) Ipc01G0009270 AT3G60280.1 uclacyanin 3 Encodes blue copper-binding protein III. uclacyanin 3;(source:Araport11) Ipc01G0009260 AT5G47120.1 BAX inhibitor 1 Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. The mRNA is cell-to-cell mobile. BAX inhibitor 1;(source:Araport11) Ipc01G0009250 AT3G60260.3 ELMO/CED-12 family protein 0 ELMO/CED-12 family protein;(source:Araport11) Ipc01G0009240 AT4G09320.1 Nucleoside diphosphate kinase family protein nucleoside diphosphate kinase type 1 (NDPK1) gene, complete The mRNA is cell-to-cell mobile. nucleoside diphosphate kinase;(source:Araport11) Ipc01G0009230 AT2G44745.1 WRKY family transcription factor 0 WRKY family transcription factor;(source:Araport11) Ipc01G0009220 AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0009210 AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0009200 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc01G0009190 AT4G11720.1 hapless 2 Encodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane. Target promoter of the male germline-specific transcription factor DUO1. hapless 2;(source:Araport11) Ipc01G0009180 AT2G44710.2 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0009170 AT1G28710.4 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc01G0009160 AT1G02160.1 Cox19 family protein (CHCH motif) 0 Cox19 family protein (CHCH motif);(source:Araport11) Ipc01G0009150 AT5G47080.1 casein kinase II beta chain 1 Regulatory subunit beta of casein kinase II (CK2). purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis. casein kinase II beta chain 1;(source:Araport11) Ipc01G0009140 AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc01G0009130 AT3G10950.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc01G0009120 AT5G47070.1 Protein kinase superfamily protein Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens. Protein kinase superfamily protein;(source:Araport11) Ipc01G0009110 AT4G17670.1 Protein of unknown function (DUF581) 0 senescence-associated family protein (DUF581);(source:Araport11) Ipc01G0009100 AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit Encodes the mitochondrial ATP synthase subunit delta. ATPase, F1 complex, delta/epsilon subunit;(source:Araport11) Ipc01G0009090 AT2G44660.1 ALG6, ALG8 glycosyltransferase family 0 ALG6, ALG8 glycosyltransferase family;(source:Araport11) Ipc01G0009080 AT5G45290.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0009070 AT3G60220.1 TOXICOS EN LEVADURA 4 Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4). TOXICOS EN LEVADURA 4;(source:Araport11) Ipc01G0009060 AT1G02180.1 ferredoxin-related 0 ferredoxin-like protein;(source:Araport11) Ipc01G0009050 AT3G60210.1 GroES-like family protein 0 GroES-like family protein;(source:Araport11) Ipc01G0009040 AT2G44640.1 0 0 TRIGALACTOSYLDIACYLGLYCEROL-like protein;(source:Araport11) Ipc01G0009030 AT5G46940.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc01G0009020 AT2G44620.1 mitochondrial acyl carrier protein 1 Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble. The mRNA is cell-to-cell mobile. mitochondrial acyl carrier protein 1;(source:Araport11) Ipc01G0009010 AT2G44610.1 Ras-related small GTP-binding family protein Golgi-localized small GTPase, participates in the trafficking of CESA6 to the plasma membrane, maintaining Golgi organization and morphology, possible role in exocytosis. Plays and important role in hypocotyl growth by influencing cell elongation/growth and deposition of cellulose microfibrils in the cell wall. Plays an important role in cellulose synthesis. Influences both the distribution and velocity of cellulose synthase complexes in the plasma membrane. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. Ras-related small GTP-binding family protein;(source:Araport11) Ipc01G0009000 AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0008990 AT1G44750.6 0 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 11;(source:Araport11) Ipc01G0008980 AT2G44610.1 Ras-related small GTP-binding family protein Golgi-localized small GTPase, participates in the trafficking of CESA6 to the plasma membrane, maintaining Golgi organization and morphology, possible role in exocytosis. Plays and important role in hypocotyl growth by influencing cell elongation/growth and deposition of cellulose microfibrils in the cell wall. Plays an important role in cellulose synthesis. Influences both the distribution and velocity of cellulose synthase complexes in the plasma membrane. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. Ras-related small GTP-binding family protein;(source:Araport11) Ipc01G0008970 AT2G44610.1 Ras-related small GTP-binding family protein Golgi-localized small GTPase, participates in the trafficking of CESA6 to the plasma membrane, maintaining Golgi organization and morphology, possible role in exocytosis. Plays and important role in hypocotyl growth by influencing cell elongation/growth and deposition of cellulose microfibrils in the cell wall. Plays an important role in cellulose synthesis. Influences both the distribution and velocity of cellulose synthase complexes in the plasma membrane. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. Ras-related small GTP-binding family protein;(source:Araport11) Ipc01G0008960 AT1G44750.6 0 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 11;(source:Araport11) Ipc01G0008950 AT1G44750.6 0 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 11;(source:Araport11) Ipc01G0008940 AT1G02880.3 thiamin pyrophosphokinase1 Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1;(source:Araport11) Ipc01G0008930 AT2G44600.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0008920 AT2G13560.1 NAD-dependent malic enzyme 1 Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day. The mRNA is cell-to-cell mobile. NAD-dependent malic enzyme 1;(source:Araport11) Ipc01G0008910 AT3G60190.1 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E;(source:Araport11) Ipc01G0008900 AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc01G0008890 AT2G39445.3 0 0 Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit;(source:Araport11) Ipc01G0008880 AT5G26667.4 0 encodes a uridine 5 Prime-monophosphate (UMP)/cytidine 5 Prime-monophosphate (CMP) kinase.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0008870 AT3G60966.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0008860 AT1G02205.5 0 Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc01G0008850 AT1G02205.2 Fatty acid hydroxylase superfamily Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc01G0008840 AT1G02205.2 Fatty acid hydroxylase superfamily Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc01G0008830 AT2G44580.2 0 0 zinc ion binding protein;(source:Araport11) Ipc01G0008820 AT5G27640.3 0 encodes a member of eukaryotic translation initiation factor 3B family. translation initiation factor 3B1;(source:Araport11) Ipc01G0008810 AT3G60160.1 multidrug resistance-associated protein 9 member of MRP subfamily multidrug resistance-associated protein 9;(source:Araport11) Ipc01G0008800 AT3G17668.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc01G0008790 AT2G44530.1 Phosphoribosyltransferase family protein 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0008780 AT2G44525.1 Protein of unknown function (DUF498/DUF598) 0 NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598);(source:Araport11) Ipc01G0008770 AT2G44520.1 cytochrome c oxidase 10 0 cytochrome c oxidase 10;(source:Araport11) Ipc01G0008760 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc01G0008750 AT5G46570.1 BR-signaling kinase 2 Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. BR-signaling kinase 2;(source:Araport11) Ipc01G0008740 AT1G32460.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0008730 AT2G35930.1 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23;(source:Araport11) Ipc01G0008720 AT1G32560.1 Late embryogenesis abundant protein, group 1 protein Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Late embryogenesis abundant protein, group 1 protein;(source:Araport11) Ipc01G0008710 AT2G35270.1 Predicted AT-hook DNA-binding family protein Direct target of AGAMOUS. Regulates patterning and differentiation of reproductive organs. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc01G0008700 AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0008690 AT3G03570.1 Protein of unknown function (DUF3550/UPF0682) 0 signal transducer, putative (DUF3550/UPF0682);(source:Araport11) Ipc01G0008680 AT5G35930.4 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0008670 AT1G32170.1 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan endotransglycosylase-related protein (XTR4) The mRNA is cell-to-cell mobile. xyloglucan endotransglucosylase/hydrolase 30;(source:Araport11) Ipc01G0008660 AT2G21630.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0008650 AT2G31210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor that together with bHLH089 and bHLH010 is important for the normal transcriptome of the developing Arabidopsis anther, possibly by forming a feed-forward loop with DYT1. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0008640 AT5G17580.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc01G0008630 AT1G54250.1 RNA polymerase Rpb8 One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600. RNA polymerase Rpb8;(source:Araport11) Ipc01G0008620 AT1G64850.1 Calcium-binding EF hand family protein 0 Calcium-binding EF hand family protein;(source:Araport11) Ipc01G0008610 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc01G0008600 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc01G0008590 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0008570 AT3G53590.1 Leucine-rich repeat protein kinase family protein 0 LRR receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc01G0008560 AT5G17620.1 0 0 nuclear matrix protein;(source:Araport11) Ipc01G0008580 AT5G40940.1 putative fasciclin-like arabinogalactan protein 20 0 putative fasciclin-like arabinogalactan protein 20;(source:Araport11) Ipc01G0008550 AT5G17630.1 Nucleotide/sugar transporter family protein Phosphate translocator family member which resides in the plastid inner envelope membrane. Retrieves excessive pentose phosphates from the extra-plastidial space and makes them available to the plastids. Nucleotide/sugar transporter family protein;(source:Araport11) Ipc01G0008540 AT5G45275.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0008530 AT1G71360.2 0 Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. Galactose-binding protein;(source:Araport11) Ipc01G0008520 AT5G17640.1 Protein of unknown function (DUF1005) Expression of this gene is induced by abscisic acid and salt stress. nuclear factor 1 A-type protein (DUF1005);(source:Araport11) Ipc01G0008510 AT5G17660.1 tRNA (guanine-N-7) methyltransferase 0 tRNA (guanine-N-7) methyltransferase;(source:Araport11) Ipc01G0008500 AT5G57300.4 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0008490 AT5G17690.1 like heterochromatin protein (LHP1) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc01G0008480 #N/A #N/A #N/A #N/A Ipc01G0008470 AT3G27390.2 0 0 transmembrane protein;(source:Araport11) Ipc01G0008460 AT2G43030.1 Ribosomal protein L3 family protein 0 Ribosomal protein L3 family protein;(source:Araport11) Ipc01G0008450 AT1G55360.1 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase (DUF239);(source:Araport11) Ipc01G0008440 AT2G18370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0008430 AT1G05590.3 0 Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3. beta-hexosaminidase 2;(source:Araport11) Ipc01G0008420 AT5G37660.2 plasmodesmata-located protein 7 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. plasmodesmata-located protein 7;(source:Araport11) Ipc01G0008410 AT2G44260.1 Plant protein of unknown function (DUF946) 0 DUF946 family protein (DUF946);(source:Araport11) Ipc01G0008400 AT1G05577.1 Domain of unknown function (DUF966) SOK1 is a DUF966 domain containing protein. It is expressed during embryogenesis in the apical-lateral plasma membrane. SOK1 can form homodimers and it's polar localization of SOK1 depends on N terminal domains within the protein. Misexpression of SOK1 or delocalization alters cell division planes. UPSTREAM OF FLC protein (DUF966);(source:Araport11) Ipc01G0008390 AT2G31930.1 0 protein of unknown function hypothetical protein;(source:Araport11) Ipc01G0008380 AT3G58500.1 protein phosphatase 2A-4 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. protein phosphatase 2A-4;(source:Araport11) Ipc01G0008370 AT2G44280.4 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0008360 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0008350 AT3G56710.2 0 Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts. sigma factor binding protein 1;(source:Araport11) Ipc01G0008340 AT3G60080.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0008330 AT2G31945.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0008320 AT2G44350.4 0 encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA. Citrate synthase family protein;(source:Araport11) Ipc01G0008310 AT2G44360.1 0 0 ecotropic viral integration site protein;(source:Araport11) Ipc01G0008300 AT5G13000.1 glucan synthase-like 12 encodes a gene similar to callose synthase glucan synthase-like 12;(source:Araport11) Ipc01G0008290 AT5G19900.5 0 0 PRLI-interacting factor;(source:Araport11) Ipc01G0008280 AT2G44380.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0008270 AT2G44380.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0008260 AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0008250 AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0008240 AT5G06710.1 homeobox from Arabidopsis thaliana Homeobox-leucine zipper protein. homeobox leucine zipper protein;(source:Araport11) Ipc01G0008230 AT2G32840.1 proline-rich family protein 0 proline-rich family protein;(source:Araport11) Ipc01G0008220 AT2G44430.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc01G0008210 AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein;(source:Araport11) Ipc01G0008200 AT2G32850.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0008190 AT1G04945.2 HIT-type Zinc finger family protein 0 HIT-type Zinc finger family protein;(source:Araport11) Ipc01G0008180 AT2G44500.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc01G0008170 AT5G42850.2 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc01G0008160 AT3G59550.1 Rad21/Rec8-like family protein Encodes an alpha-kleisin protein that is localized primarily in the nucleolus and is essential for megagametogenesis and plays an important role in pollen development. alpha-kleisins are core components of meiotic and mitotic cohesin complexes. Rad21/Rec8-like family protein;(source:Araport11) Ipc01G0008150 AT3G52150.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0008140 AT3G57880.4 0 Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region. Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0008130 AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0008120 AT5G48030.1 gametophytic factor 2 encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. gametophytic factor 2;(source:Araport11) Ipc01G0008110 AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress. Its activity can be modulated by Lys acetylation. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0008100 AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress. Its activity can be modulated by Lys acetylation. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0008090 AT4G19950.1 0 0 polyadenylate-binding protein 1-B-binding protein;(source:Araport11) Ipc01G0008080 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc01G0008070 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc01G0008050 AT5G47960.1 RAB GTPase homolog A4C Encodes a small molecular weight g-protein. RAB GTPase homolog A4C;(source:Araport11) Ipc01G0008060 AT1G19320.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc01G0008040 AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0008030 AT2G42280.3 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0008020 AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein 0 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein;(source:Araport11) Ipc01G0008010 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0008000 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc01G0007990 AT1G61030.1 WAPL (Wings apart-like protein regulation of heterochromatin) protein Encodes one of two redundant proteins (the other is WAPL1) that are involved in prophase removal of cohesion during meiosis. Double mutants with wapl1 exhibit reduced fertility due to defects in meiosis and also some abnormal embryo development in rare cases where embryos are formed. WAPL (Wings apart-like protein regulation of heterochromatin) protein;(source:Araport11) Ipc01G0007980 AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 0 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD);(source:Araport11) Ipc01G0007970 AT1G36510.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc01G0007960 AT5G26880.1 AGAMOUS-like 26 Root Specific tRNA (cytidine(34)-2-O)-methyltransferase;(source:Araport11) Ipc01G0007950 AT5G56710.1 Ribosomal protein L31e family protein 0 Ribosomal protein L31e family protein;(source:Araport11) Ipc01G0007940 AT5G56710.1 Ribosomal protein L31e family protein 0 Ribosomal protein L31e family protein;(source:Araport11) Ipc01G0007930 AT1G30760.2 0 Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes.The mRNA is cell-to-cell mobile. FAD-binding Berberine family protein;(source:Araport11) Ipc01G0007920 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc01G0007910 AT2G41451.1 0 0 glycosyltransferase-like protein;(source:Araport11) Ipc01G0007900 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc01G0007890 AT3G12640.3 0 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0007880 AT3G08505.3 0 0 zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc01G0007870 AT3G63540.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc01G0007860 AT3G57670.1 C2H2-type zinc finger family protein Encodes a a C2H2/C2HC zinc finger transcription factor specifically expressed in the transmitting tract and involved in transmitting tract development and pollen tube growth.Acts redundantly with WIP4 and WIP5 to determine distal cell fate in the root. MP binds to regulatory elements within the NTT locus and likely regulates its expression. C2H2-type zinc finger family protein;(source:Araport11) Ipc01G0007850 AT4G08370.1 Proline-rich extensin-like family protein 0 Proline-rich extensin-like family protein;(source:Araport11) Ipc01G0007840 AT3G52110.2 0 0 interferon-activable protein;(source:Araport11) Ipc01G0007830 #N/A #N/A #N/A #N/A Ipc01G0007820 AT5G13450.1 delta subunit of Mt ATP synthase 0 delta subunit of Mt ATP synthase;(source:Araport11) Ipc01G0007810 AT3G08500.1 myb domain protein 83 Encodes a putative R2R3-type MYB transcription factor (MYB83). myb domain protein 83;(source:Araport11) Ipc01G0007800 AT3G08490.1 0 0 delta-latroinsectotoxin-Lt1a protein;(source:Araport11) Ipc01G0007790 AT3G08040.1 MATE efflux family protein Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. MATE efflux family protein;(source:Araport11) Ipc01G0007780 AT3G08040.1 MATE efflux family protein Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. MATE efflux family protein;(source:Araport11) Ipc01G0007770 AT3G08040.1 MATE efflux family protein Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. MATE efflux family protein;(source:Araport11) Ipc01G0007760 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc01G0007750 AT5G19855.1 Chaperonin-like RbcX protein Encodes a chloroplast stromal localized RbcX protein that acts as a chaperone in the folding of Rubisco. Chaperonin-like RbcX protein;(source:Araport11) Ipc01G0007740 AT5G05170.1 Cellulose synthase family protein Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification. Cellulose synthase family protein;(source:Araport11) Ipc01G0007730 AT4G15030.1 0 0 folate-sensitive fragile site protein;(source:Araport11) Ipc01G0007720 AT5G12840.4 nuclear factor Y, subunit A1 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. nuclear factor Y, subunit A1;(source:Araport11) Ipc01G0007710 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc01G0007700 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0007690 AT5G11950.3 0 Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210. Putative lysine decarboxylase family protein;(source:Araport11) Ipc01G0007680 AT2G07675.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc01G0007670 AT5G21080.1 Uncharacterized protein 0 Uncharacterized protein;(source:Araport11) Ipc01G0007660 AT3G52070.2 0 0 RNA/RNP complex-1-interacting phosphatase;(source:Araport11) Ipc01G0007650 AT3G63500.3 0 Encodes a PHD-finger protein that, with TTA2, is redundantly required for MP-dependent embryonic root meristem initiation. fibronectin type III domain protein (DUF1423);(source:Araport11) Ipc01G0007640 AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 0 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2;(source:Araport11) Ipc01G0007630 AT3G08650.1 ZIP metal ion transporter family 0 ZIP metal ion transporter family;(source:Araport11) Ipc01G0007620 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc01G0007610 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc01G0007600 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc01G0007590 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc01G0007580 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc01G0007570 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc01G0007560 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0007550 AT3G53170.4 0 0 LOW protein: PPR containing protein;(source:Araport11) Ipc01G0007540 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0007530 AT5G13700.1 polyamine oxidase 1 Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants). polyamine oxidase 1;(source:Araport11) Ipc01G0007520 AT4G04940.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0007510 AT5G13720.1 Uncharacterised protein family (UPF0114) 0 Uncharacterized protein family (UPF0114);(source:Araport11) Ipc01G0007500 AT5G13730.1 sigma factor 4 Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity. sigma factor 4;(source:Araport11) Ipc01G0007490 AT5G15920.1 structural maintenance of chromosomes 5 Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. structural maintenance of chromosomes 5;(source:Araport11) Ipc01G0007480 AT5G12470.1 Protein of unknown function (DUF3411) 0 UvrABC system C protein, putative (DUF3411);(source:Araport11) Ipc01G0007470 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc01G0007460 AT5G51750.1 subtilase 1.3 0 subtilase 1.3;(source:Araport11) Ipc01G0007450 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc01G0007440 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc01G0007430 AT5G13760.1 Plasma-membrane choline transporter family protein 0 Plasma-membrane choline transporter family protein;(source:Araport11) Ipc01G0007420 AT5G13780.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Encodes the catalytic subunit of a N-terminal acetyltransferase. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc01G0007410 AT3G52030.2 F-box family protein with WD40/YVTN repeat doamin 0 F-box family protein with WD40/YVTN repeat doamin;(source:Araport11) Ipc01G0007400 AT3G60910.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0007390 AT5G13790.1 AGAMOUS-like 15 AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.AGL15 binds the HAE promoter in floral receptacles and represses HAE expression. AGL15 is phosphorylated in a MKK4/5 dependent manner in floral receptacles. Serines 231 and 257 are phosphorylated in floral receptacles. AGL15 also directly regulates the expression of the peroxidase PRX17, linking it to lignified tissue expression. AGAMOUS-like 15;(source:Araport11) Ipc01G0007380 AT3G63460.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0007370 AT5G43210.1 Excinuclease ABC, C subunit, N-terminal 0 Excinuclease ABC, C subunit, N-terminal;(source:Araport11) Ipc01G0007360 AT3G51990.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0007350 AT3G57330.1 autoinhibited Ca2+-ATPase 11 Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate) autoinhibited Ca2+-ATPase 11;(source:Araport11) Ipc01G0007340 AT5G13470.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0007330 AT2G41540.4 0 Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc01G0007320 AT3G51690.1 PIF1 helicase DNA helicase homolog PIF1. PIF1 helicase;(source:Araport11) Ipc01G0007310 AT3G63440.1 cytokinin oxidase/dehydrogenase 6 This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 6;(source:Araport11) Ipc01G0007300 AT3G61370.3 0 0 pre-mRNA-splicing factor CWC22-like protein (DUF3245);(source:Araport11) Ipc01G0007290 AT5G13460.1 IQ-domain 11 0 IQ-domain 11;(source:Araport11) Ipc01G0007280 AT5G03990.1 0 0 FK506-binding-like protein;(source:Araport11) Ipc01G0007270 AT3G08550.1 elongation defective 1 protein / ELD1 protein mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein elongation defective 1 protein / ELD1 protein;(source:Araport11) Ipc01G0007260 AT4G30890.3 ubiquitin-specific protease 24 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 24;(source:Araport11) Ipc01G0007250 AT3G51930.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0007240 AT5G63940.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc01G0007230 AT5G63950.1 chromatin remodeling 24 0 chromatin remodeling 24;(source:Araport11) Ipc01G0007220 AT4G30870.1 Restriction endonuclease, type II-like superfamily protein Encodes an Arabidopsis homolog of the endonuclease MSU81. T-DNA insertion lines of AtMSU81 have a deficiency in homologous recombination in somatic cells but only after genotoxic stress. Crosses with a hyperrecombinogenic mutant of the AtRecQ4A helicase resulted in synthetic lethality in the double mutant. Involved in DNA-Protein crosslink (DPC) repair in independent pathways to WSS1A and TDP1. Restriction endonuclease, type II-like superfamily protein;(source:Araport11) Ipc01G0007210 AT5G50400.1 purple acid phosphatase 27 0 purple acid phosphatase 27;(source:Araport11) Ipc01G0007200 AT5G26910.4 0 Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division. GPI-anchored adhesin-like protein;(source:Araport11) Ipc01G0007190 AT5G44510.4 0 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc01G0007180 AT5G16530.2 0 Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis. Auxin efflux carrier family protein;(source:Araport11) Ipc01G0007170 AT3G14850.2 TRICHOME BIREFRINGENCE-LIKE 41 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 41;(source:Araport11) Ipc01G0007160 AT1G50420.1 scarecrow-like 3 Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). scarecrow-like 3;(source:Araport11) Ipc01G0007150 AT1G34570.1 Essential protein Yae1, N-terminal 0 Essential protein Yae1, N-terminal;(source:Araport11) Ipc01G0007140 AT3G54510.2 Early-responsive to dehydration stress protein (ERD4) 0 Early-responsive to dehydration stress protein (ERD4);(source:Araport11) Ipc01G0007130 AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein Leucine rich repeat protein that also contains an adenylate cyclase catalytic core motif. Capable of converting ATP to cAMP in vitro. Mutants show increased susceptibility to fungal pathogens. LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc01G0007120 AT2G38760.1 annexin 3 Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. The mRNA is cell-to-cell mobile. annexin 3;(source:Araport11) Ipc01G0007110 AT2G38750.1 annexin 4 Annexins are a family of calcium dependent membrane binding proteins though to be involved in Golgi mediated secretion. This is one of four annexins identified in Arabidopsis. annexin 4;(source:Araport11) Ipc01G0007100 AT5G12380.1 annexin 8 0 annexin 8;(source:Araport11) Ipc01G0007080 AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis uridine 5-monophosphate synthase / UMP synthase (PYRE-F) (UMPS);(source:Araport11) Ipc01G0007090 AT3G61790.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc01G0007070 AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family 0 Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11) Ipc01G0007060 AT5G13810.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc01G0007050 AT5G59560.2 sensitivity to red light reduced protein (SRR1) Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling. sensitivity to red light reduced protein (SRR1);(source:Araport11) Ipc01G0007040 AT5G13480.3 0 Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0007030 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc01G0007020 AT1G33520.1 D111/G-patch domain-containing protein Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4; D111/G-patch domain-containing protein;(source:Araport11) Ipc01G0007010 AT3G54450.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0007000 AT2G40030.1 nuclear RNA polymerase D1B Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. The nrpe1 mutant is more resistant to biotrophic pathogens and is primed to activate salicylic acid-dependent defence genes. nuclear RNA polymerase D1B;(source:Araport11) Ipc01G0006990 AT3G54440.1 glycoside hydrolase family 2 protein 0 glycoside hydrolase family 2 protein;(source:Araport11) Ipc01G0006980 AT3G55850.6 0 Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids. Amidohydrolase family;(source:Araport11) Ipc01G0006970 AT1G16740.1 Ribosomal protein L20 0 Ribosomal protein L20;(source:Araport11) Ipc01G0006960 AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein Encodes a mitochondrial protein essential for the splicing of group II introns in two mitochondrial genes for which splicing factors had not previously been identified: rpl2 and ccmFc. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0006950 AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein Encodes a mitochondrial protein essential for the splicing of group II introns in two mitochondrial genes for which splicing factors had not previously been identified: rpl2 and ccmFc. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0006940 #N/A #N/A #N/A #N/A Ipc01G0006930 AT4G19160.1 0 0 transglutaminase family protein;(source:Araport11) Ipc01G0006920 AT5G13500.3 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc01G0006910 AT3G54400.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0006900 AT3G54390.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc01G0006890 AT4G05440.1 temperature sensing protein-related Plays a role in pollen development and modulating DNA replication via interaction with MCM4 and MCM7 of the pre-replication complex. temperature sensing protein-like protein;(source:Araport11) Ipc01G0006880 AT3G12300.1 0 Similar to Bug22p in Paramecium, a conserved centrosomal/ciliary protein. This protein is widespread in eukaryotes harboring centrioles/cilia at some stage of their life cycles. Among eukaryotes devoid of centrioles/cilia, plants possess BUG22 genes whereas some fungi (at least ascomycetes) do not. cilia/flagella-associated protein;(source:Araport11) Ipc01G0006870 AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein ERI (At3g15140) encodes a protein of 337 amino acids of the ribonuclease H-like superfamily. The protein contains both DEDDh and SAP domains.The first exon contains a TCT-microsatellite structure (starting 226 bp after ATG) that, based on sequence complementarity, is a miR5021-cleavage target site. ERI is predicted to function as an siRNA exonuclease. Overexpression leads to increased post transcriptional gene silencing and reduced numbers of 21mers. Macroscopically, the growth rate is increased in overexpressors leading to increased biomass. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0006860 AT1G20160.1 Subtilisin-like serine endopeptidase family protein Encodes two isoforms. One (SBT5.2(a) ) is a secreted, cell wall localized subtilisin-like serine protease that is involved in regulation of stomatal development. The second isoform (SBT5.2(b) is localized to endosomes. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc01G0006850 AT3G12270.1 protein arginine methyltransferase 3 0 protein arginine methyltransferase 3;(source:Araport11) Ipc01G0006840 AT5G06970.1 Protein of unknown function (DUF810) PATROL1 is a Munc13-like protein involved in mediating H[+]-ATPase translocation. It interacts with AHA1and is responsible for its translocation during stomatal movement. plant/protein (DUF810);(source:Araport11) Ipc01G0006830 AT2G38730.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc01G0006790 AT5G23450.5 0 Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine. long-chain base (LCB) kinase 1;(source:Araport11) Ipc01G0006820 AT3G09520.1 exocyst subunit exo70 family protein H4 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H4;(source:Araport11) Ipc01G0006810 AT3G55140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0006800 AT3G09550.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc01G0006780 AT2G39370.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc01G0006770 AT5G13560.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc01G0006760 AT3G09560.4 0 The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 μM Pi. Lipin family protein;(source:Araport11) Ipc01G0006750 AT5G18520.1 Lung seven transmembrane receptor family protein Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. The mRNA is cell-to-cell mobile. Lung seven transmembrane receptor family protein;(source:Araport11) Ipc01G0006740 AT5G02740.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc01G0006730 AT3G53490.1 0 0 valine-tRNA ligase;(source:Araport11) Ipc01G0006720 AT2G37360.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc01G0006710 AT2G37320.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0006700 AT3G45850.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0006690 AT3G58090.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc01G0006680 AT5G02770.1 0 Encodes a conserved eukaryotic protein with homology to the human RNA binding protein CIP29 that localizes to the nucleus. Mutants accumulate more poly(A) mRNAs in the nucleus, likely resulting from reduced mRNA export activity. Protein MODIFIER OF SNC1 11;(source:Araport11) Ipc01G0006670 AT5G12130.1 integral membrane TerC family protein 0 integral membrane TerC family protein;(source:Araport11) Ipc01G0006660 AT5G02800.1 Protein kinase superfamily protein Encodes CDL1, a homolog of CDG1. CDL1 positively regulates brassinosteroid signaling and plant growth. Protein kinase superfamily protein;(source:Araport11) Ipc01G0006650 AT2G37260.1 WRKY family transcription factor family protein Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function alleles are associated with a reduction in interploidy lethality. WRKY family transcription factor family protein;(source:Araport11) Ipc01G0006640 AT5G02810.1 pseudo-response regulator 7 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7;(source:Araport11) Ipc01G0006630 AT2G37250.1 adenosine kinase encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth adenosine kinase;(source:Araport11) Ipc01G0006620 AT2G37240.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc01G0006610 AT5G02830.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0006600 AT3G09630.1 Ribosomal protein L4/L1 family 0 Ribosomal protein L4/L1 family;(source:Araport11) Ipc01G0006590 AT3G09600.7 0 Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation. Functions as a transcriptional activator of evening element containing clock genes. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0006580 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0006570 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc01G0006560 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc01G0006550 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0006540 AT2G15080.2 receptor like protein 19 0 receptor like protein 19;(source:Araport11) Ipc01G0006530 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0006520 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc01G0006510 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0006500 AT1G75820.1 Leucine-rich receptor-like protein kinase family protein Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0006490 AT2G37050.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0006480 AT5G19660.1 SITE-1 protease S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro. SITE-1 protease;(source:Araport11) Ipc01G0006470 AT5G02880.1 ubiquitin-protein ligase 4 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. The mRNA is cell-to-cell mobile. ubiquitin-protein ligase 4;(source:Araport11) Ipc01G0006450 AT3G09660.3 0 Encodes a minichromosome maintenance protein that is involved with RAD51 in a backup pathway that repairs meiotic double strand breaks without giving meiotic crossovers when the major pathway, which relies on DMC1, fails. minichromosome maintenance 8;(source:Araport11) Ipc01G0006460 AT3G09650.1 Tetratricopeptide repeat (TPR)-like superfamily protein RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0006440 AT3G53320.1 0 Encodes a microtubule-associated protein track growing microtubule plus ends. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc01G0006430 AT5G02960.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc01G0006420 AT2G37080.3 0 Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 3;(source:Araport11) Ipc01G0006410 AT5G02970.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0006400 AT5G03040.3 IQ-domain 2 0 IQ-domain 2;(source:Araport11) Ipc01G0006390 AT2G37090.1 Nucleotide-diphospho-sugar transferases superfamily protein The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.IRX9 was identified as MUCI65 in a reverse genetic screen for MUCILAGE-RELATED genes. Despite producing only a few seeds, the irx9-1 mutant displays normal mucilage properties. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc01G0006380 AT3G09720.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0006370 AT5G03080.1 Phosphatidic acid phosphatase (PAP2) family protein Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene, LPPgamma appears to be more important for diacylglycerol formation than LPPepsilon1 and LPPepsilon2 in the plastids. Heterozygous lppgamma mutants produce pollen that have defects in pollen tube germination and no homozygous mutants have been recovered. The mRNA is cell-to-cell mobile. Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc01G0006360 AT2G37100.1 protamine P1 family protein 0 protamine P1 family protein;(source:Araport11) Ipc01G0006350 AT5G03120.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0006340 AT2G37110.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc01G0006330 AT2G37120.1 S1FA-like DNA-binding protein 0 S1FA-like DNA-binding protein;(source:Araport11) Ipc01G0006320 AT3G53380.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc01G0006310 AT2G37130.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc01G0006300 AT1G11310.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in A. thaliana does not involve the signaling molecules ethylene, jasmonic acid or salicylic acid, but requires a syntaxin, glycosyl hydrolase and ABC transporter. It is a novel virulence target of the P. syringae type III secreted effector HopZ2. Seven transmembrane MLO family protein;(source:Araport11) Ipc01G0006290 AT1G14610.1 valyl-tRNA synthetase / valine--tRNA ligase (VALRS) Required for proper proliferation of basal cells. valyl-tRNA synthetase / valine-tRNA ligase (VALRS);(source:Araport11) Ipc01G0006280 AT5G03150.1 C2H2-like zinc finger protein JKD is a nuclear-localized putative transcription factor of the BIRDS/IDD C2H2 zinc finger family. JKD and its homologue BIB, restrict SHR movement to a single layer, the endodermis, and delimit tissue boundaries in the root meristem through a process that involves nuclear retention through protein complex formation. JKD mutation leads to periclinal divisions in the cortex, increased cell numbers in the circumference of the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. This effect is enhanced in jkd bib double mutants where tissue boundaries cannot be maintained due to excessive SHR movement. JKD and BIB restrict CYCIND6 expression to cortex and endodermis stem cells to prevent formative divisions in the ground tissue. JKD physically interacts with cell fate determinants SCR and SHR in a cell type specific manner. Native FRET-FLIM analysis showed higher JKD-SCR complex in the endodermis and predominant JKD-SHR in the QC and cortex/endodermis stem cells. In addition, JKD, SCR and SHR form a ternary complex whose conformation is cell type dependent, conformational changes of this complex differentially regulate SCR and WOX5 expression to specify endodermal cell fate and QC function respectively. Its mRNA is cell-to-cell mobile. C2H2-like zinc finger protein;(source:Araport11) Ipc01G0006270 AT5G03160.1 homolog of mamallian P58IPK J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. DnaJ P58IPK-like protein;(source:Araport11) Ipc01G0006260 AT3G09760.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0006250 AT3G09770.1 RING/U-box superfamily protein Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion. RING/U-box superfamily protein;(source:Araport11) Ipc01G0006240 AT5G16420.4 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0006230 AT2G22660.3 0 Encodes a member of a family of DUF1399 domain containing proteins. GRDP1 is involved in germination and response to ABA. Loss of function mutants have reduced germination in the presence of osmotic stressors. DNA-binding protein, putative (duplicated DUF1399);(source:Araport11) Ipc01G0006220 AT3G09780.1 CRINKLY4 related 1 0 CRINKLY4 related 1;(source:Araport11) Ipc01G0006210 AT4G23710.1 vacuolar ATP synthase subunit G2 0 vacuolar ATP synthase subunit G2;(source:Araport11) Ipc01G0006200 AT3G54820.1 plasma membrane intrinsic protein 2;5 0 plasma membrane intrinsic protein 2;(source:Araport11) Ipc01G0006190 AT3G54820.1 plasma membrane intrinsic protein 2;5 0 plasma membrane intrinsic protein 2;(source:Araport11) Ipc01G0006180 AT3G45210.1 Protein of unknown function, DUF584 0 transcription initiation factor TFIID subunit (Protein of unknown function, DUF584);(source:Araport11) Ipc01G0006170 AT2G28370.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc01G0006160 AT4G05320.4 polyubiquitin 10 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc01G0006150 AT4G30080.1 auxin response factor 16 Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16;(source:Araport11) Ipc01G0006140 AT5G56870.1 beta-galactosidase 4 0 beta-galactosidase 4;(source:Araport11) Ipc01G0006130 AT2G37210.1 lysine decarboxylase family protein Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. lysine decarboxylase family protein;(source:Araport11) Ipc01G0006120 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0006110 AT2G37230.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0006090 AT4G07400.1 VIER F-box proteine 3 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2,and 4. When levels of all 4 genes are reduced plants show defects in growth and reduced levels of auxin response genes. VIER F-box protein 3;(source:Araport11) Ipc01G0006100 AT4G07400.1 VIER F-box proteine 3 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2,and 4. When levels of all 4 genes are reduced plants show defects in growth and reduced levels of auxin response genes. VIER F-box protein 3;(source:Araport11) Ipc01G0006080 AT5G03280.1 NRAMP metal ion transporter family protein Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence. A maternally expressed imprinted gene. Mutations in ein2 block ethylene stimulation of flavonol synthesis. The mRNA is cell-to-cell mobile. NRAMP metal ion transporter family protein;(source:Araport11) Ipc01G0006070 AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0006060 AT5G45900.1 ThiF family protein Component of autophagy conjugation pathway. Required for proper senescence. Contributes to plant basal immunity towards fungal infection. ThiF family protein;(source:Araport11) Ipc01G0006050 AT3G10710.1 root hair specific 12 0 root hair specific 12;(source:Araport11) Ipc01G0006040 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc01G0006030 AT1G72470.1 exocyst subunit exo70 family protein D1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein D1;(source:Araport11) Ipc01G0006020 AT3G14090.1 exocyst subunit exo70 family protein D3 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein D3;(source:Araport11) Ipc01G0006010 AT4G20740.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0006000 AT3G43850.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0005990 AT3G14090.1 exocyst subunit exo70 family protein D3 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein D3;(source:Araport11) Ipc01G0005980 AT1G48920.1 nucleolin like 1 Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants. The mRNA is cell-to-cell mobile. nucleolin like 1;(source:Araport11) Ipc01G0005970 AT3G18610.3 0 Encodes ATNUC-L2 (NUCLEOLIN LIKE 2). nucleolin like 2;(source:Araport11) Ipc01G0005960 AT2G20510.4 0 One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane. translocase inner membrane subunit 44-1;(source:Araport11) Ipc01G0005950 AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0005940 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc01G0005930 AT3G04340.1 FtsH extracellular protease family Functions in maintaining the cellular redox balance and regulates photorespiratory metabolism.Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). FtsH extracellular protease family;(source:Araport11) Ipc01G0005920 AT3G19760.1 eukaryotic initiation factor 4A-III Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. eukaryotic initiation factor 4A-III;(source:Araport11) Ipc01G0005910 AT3G19780.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0005900 AT3G19800.2 Protein of unknown function (DUF177) Encodes the DUF177B version of the two DUF177 proteins in Arabidopsis. This version differs from DUF177A in containing a 23 aa insertion compared to the DUF177A sequence. E3 ubiquitin-protein ligase, putative (DUF177);(source:Araport11) Ipc01G0005890 AT3G18620.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc01G0005880 AT5G36120.1 cofactor assembly, complex C (B6F) One of four Arabidopsis homologs of bacterial ymlg proteins. cofactor assembly, complex C (B6F);(source:Araport11) Ipc01G0005870 AT3G18630.1 uracil dna glycosylase Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria. uracil dna glycosylase;(source:Araport11) Ipc01G0005860 AT3G26710.1 cofactor assembly of complex C 0 cofactor assembly of complex C;(source:Araport11) Ipc01G0005850 AT3G19900.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0005840 AT4G33540.2 0 0 metallo-beta-lactamase family protein;(source:Araport11) Ipc01G0005830 AT5G10330.2 histidinol phosphate aminotransferase 1 Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1;(source:Araport11) Ipc01G0005820 AT3G19895.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0005810 AT3G19895.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0005800 AT3G19850.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc01G0005790 AT1G50300.1 TBP-associated factor 15 0 TBP-associated factor 15;(source:Araport11) Ipc01G0005780 AT3G19870.2 0 0 AP-5 complex subunit beta-like protein;(source:Araport11) Ipc01G0005770 AT3G19840.1 pre-mRNA-processing protein 40C Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries. pre-mRNA-processing protein 40C;(source:Araport11) Ipc01G0005760 AT3G19830.4 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0005750 AT1G60670.2 Protein of unknown function (DUF3755) 0 hypothetical protein (DUF3755);(source:Araport11) Ipc01G0005740 AT2G03150.1 ATP/GTP-binding protein family Encodes a nuclear-localized calcium-binding protein RSA1 (SHORT ROOT IN SALT MEDIUM 1), which is required for salt tolerance. ATP/GTP-binding protein family;(source:Araport11) Ipc01G0005730 AT4G21200.1 gibberellin 2-oxidase 8 Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins. gibberellin 2-oxidase 8;(source:Araport11) Ipc01G0005720 AT1G10850.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0005710 AT4G12400.1 stress-inducible protein, putative Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. stress-inducible protein;(source:Araport11) Ipc01G0005700 AT1G06710.9 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0005690 AT1G30200.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0005680 AT2G31260.1 autophagy 9 (APG9) Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence. autophagy 9 (APG9);(source:Araport11) Ipc01G0005670 AT3G11920.1 glutaredoxin-related 0 glutaredoxin-like protein;(source:Araport11) Ipc01G0005660 AT5G65070.3 K-box region and MADS-box transcription factor family protein Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc01G0005650 AT5G65070.1 K-box region and MADS-box transcription factor family protein Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc01G0005640 AT1G14550.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc01G0005630 AT2G02220.1 phytosulfokin receptor 1 Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). Contains dual guanylate cyclase and kinase catalytic activities that operate in vivo. phytosulfokin receptor 1;(source:Araport11) Ipc01G0005620 AT5G13770.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0005610 AT3G18420.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc01G0005600 AT2G02160.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc01G0005590 AT2G02170.5 0 0 Remorin family protein;(source:Araport11) Ipc01G0005580 AT2G02180.1 tobamovirus multiplication protein 3 Necessary for the efficient multiplication of tobamoviruses. The mRNA is cell-to-cell mobile. tobamovirus multiplication protein 3;(source:Araport11) Ipc01G0005570 AT1G31050.6 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0005560 AT2G43950.1 chloroplast outer envelope protein 37 Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos. chloroplast outer envelope protein 37;(source:Araport11) Ipc01G0005550 AT1G14570.2 UBX domain-containing protein Encodes a nuclear UBX-containing protein that can bridge ubiquitin to AtCDC48A. UBX domain-containing protein;(source:Araport11) Ipc01G0005540 AT3G22890.1 ATP sulfurylase 1 encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism. The mRNA is cell-to-cell mobile. ATP sulfurylase 1;(source:Araport11) Ipc01G0005530 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc01G0005520 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc01G0005510 AT5G04510.1 3'-phosphoinositide-dependent protein kinase 1 Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation. The mRNA is cell-to-cell mobile. 3-phosphoinositide-dependent protein kinase 1;(source:Araport11) Ipc01G0005500 AT1G48330.1 0 0 SsrA-binding protein;(source:Araport11) Ipc01G0005490 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc01G0005480 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc01G0005470 AT4G14650.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0005460 AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0005450 AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0005440 AT3G55760.3 0 0 hypothetical protein;(source:Araport11) Ipc01G0005430 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0005420 #N/A #N/A #N/A #N/A Ipc01G0005410 AT3G22942.1 G-protein gamma subunit 2 heterotrimeric G-protein gamma subunit 2(AGG2) G-protein gamma subunit 2;(source:Araport11) Ipc01G0005400 AT2G37300.4 0 0 transmembrane protein;(source:Araport11) Ipc01G0005390 AT3G22960.1 Pyruvate kinase family protein encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mRNA is cell-to-cell mobile. Pyruvate kinase family protein;(source:Araport11) Ipc01G0005380 AT3G22970.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc01G0005370 AT3G22990.1 ARM repeat superfamily protein Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues. LFR is functionally associated with AS2 to mediate leaf development. ARM repeat superfamily protein;(source:Araport11) Ipc01G0005360 AT1G04220.1 3-ketoacyl-CoA synthase 2 Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 2;(source:Araport11) Ipc01G0005350 AT1G68940.2 Armadillo/beta-catenin-like repeat family protein 0 Armadillo/beta-catenin-like repeat family protein;(source:Araport11) Ipc01G0005340 AT5G43750.1 NAD(P)H dehydrogenase 18 0 NAD(P)H dehydrogenase 18;(source:Araport11) Ipc01G0005330 AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a putative LysM-containing receptor-like kinase LYK4. Shares overlapping function with LYK5 in mediating chitin-triggered immune responses. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc01G0005320 AT4G02590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0005310 AT5G43700.1 AUX/IAA transcriptional regulator family protein Auxin inducible protein similar to transcription factors. AUX/IAA transcriptional regulator family protein;(source:Araport11) Ipc01G0005300 AT1G71020.2 ARM repeat superfamily protein Encodes a nuclear localized plant U-Box protein that interacts with MYC2 and regulates its stability by acting as an E3 ubiquitin ligase and polyubiquitinating MYC2. By this mechanism, it targets MYC2 for destruction thereby affecting JA signaling. ARM repeat superfamily protein;(source:Araport11) Ipc01G0005290 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0005280 AT3G23050.1 indole-3-acetic acid 7 Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. Pseudomonas syringae type III effector AvrRpt2 stimulates AXR2 protein turnover. indole-3-acetic acid 7;(source:Araport11) Ipc01G0005270 AT5G64560.1 magnesium transporter 9 Transmembrane magnesium transporter that is located in plasma membrane of microspores to take up Mg from the locule. One of 9 family members. magnesium transporter 9;(source:Araport11) Ipc01G0005260 AT1G04260.1 CAMV movement protein interacting protein 7 Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors. CAMV movement protein interacting protein 7;(source:Araport11) Ipc01G0005250 AT1G03670.1 ankyrin repeat family protein Ankyrin repeat containing protein ankyrin repeat family protein;(source:Araport11) Ipc01G0005240 AT5G09500.1 Ribosomal protein S19 family protein 0 Ribosomal protein S19 family protein;(source:Araport11) Ipc01G0005230 AT3G48170.1 aldehyde dehydrogenase 10A9 ALDH10A9 encodes a protein that can function as a betaine aldehyde dehydrogenase in vitro. The C-terminal amino acids of this protein direct GFP to the peroxisome suggesting that ALDH10A9 accumulates in this organelle. ALDH10A9 transcript levels rise in response to ABA, NaCl, chilling, methyl viologen, and dehydration stress. The enzyme can catalyze the formation of glycine betaine in vitro, but there are still questions about whether Arabidopsis makes this protective compound under natural conditions. This enzyme may be involved in oxidizing aminoaldehydes formed through polyamine metabolism. aldehyde dehydrogenase 10A9;(source:Araport11) Ipc01G0005220 AT5G43630.4 0 Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.The mRNA is cell-to-cell mobile. Gene ontology analysis of common promoter targets suggests an active role in the transcriptional regulation of gene expression in response to environmental, biotic, abiotic, and endogenous stimuli. Promoter regions show a huge over-representation in proteins involved in transcription, clock, flowering, and light signaling components, reflecting its involvement in regulating gene expression in response to environmental stimuli such as light and temperature. Coassociates with and regulates the expression of light-regulated loci as well as transcriptional regulators to shape plant development in response to environmental stimuli. Requires, at least in part, ZFHD10 for function with regard to blue-light-regulated hypocotyl elongation. zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0005210 AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc01G0005200 AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Functions in resistance to necrotrophic fungi and insect herbivory. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc01G0005190 AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc01G0005180 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc03G0002510 AT2G26110.1 Protein of unknown function (DUF761) 0 bromodomain protein (DUF761);(source:Araport11) Ipc03G0002500 AT1G64680.1 0 0 beta-carotene isomerase D27;(source:Araport11) Ipc03G0002490 AT5G16870.1 Peptidyl-tRNA hydrolase II (PTH2) family protein 0 Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11) Ipc03G0002480 AT5G46910.2 0 H3K27me3 demethylase involved in temperature and photoperiod dependent repressing of flowering. Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc03G0002470 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0002460 AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0002450 AT5G46860.1 Syntaxin/t-SNARE family protein Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Syntaxin/t-SNARE family protein;(source:Araport11) Ipc03G0002440 AT5G16800.2 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc03G0002430 AT5G16730.1 Plant protein of unknown function (DUF827) Encodes a microtubule-associated protein. The mRNA is cell-to-cell mobile. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc03G0002420 AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0002410 AT3G26922.4 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc03G0002400 AT4G27600.1 pfkB-like carbohydrate kinase family protein Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc03G0002390 AT1G32360.1 Zinc finger (CCCH-type) family protein 0 Zinc finger (CCCH-type) family protein;(source:Araport11) Ipc03G0002380 AT5G16660.1 0 0 Low-density receptor-like protein;(source:Araport11) Ipc03G0002370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0002360 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0002350 AT5G16680.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0002340 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc03G0002330 #N/A #N/A #N/A #N/A Ipc03G0002320 AT3G07890.5 0 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc03G0002310 AT1G64970.1 gamma-tocopherol methyltransferase gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves gamma-tocopherol methyltransferase;(source:Araport11) Ipc03G0002300 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc03G0002290 AT1G50200.1 Alanyl-tRNA synthetase 0 Alanyl-tRNA synthetase;(source:Araport11) Ipc03G0002280 AT1G64890.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0006860 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006870 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006890 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc08G0006900 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006910 AT3G11080.2 0 0 receptor like protein 35;(source:Araport11) Ipc08G0006920 AT3G12810.2 0 Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc08G0006930 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc08G0006940 AT5G04960.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a protein that modulates the activity of pectin methylesterase within the cell wall. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc08G0006950 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0006960 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006970 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0006980 AT3G47700.1 RINT-1 / TIP-1 family Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins. Member of MAG2 complex, involved in the development of vegetative organs. RINT-1 / TIP-1 family;(source:Araport11) Ipc08G0006990 AT1G30900.1 VACUOLAR SORTING RECEPTOR 6 0 VACUOLAR SORTING RECEPTOR 6;(source:Araport11) Ipc08G0007000 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007010 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0007020 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0007030 AT1G30970.1 zinc finger (C2H2 type) family protein Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc08G0007040 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0007050 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc08G0007060 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007070 AT1G48490.3 Protein kinase superfamily protein Protein kinase which together with IREH1 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc08G0007080 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0007090 AT3G19610.1 Plant protein of unknown function (DUF936) Member of a novel, plant specific family of microtubule associated proteins. hypothetical protein (DUF936);(source:Araport11) Ipc08G0007100 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0007110 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007120 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007140 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0007130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0031410 AT1G75220.1 Major facilitator superfamily protein Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply. Major facilitator superfamily protein;(source:Araport11) Ipc02G0031400 AT1G19480.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc02G0031390 AT3G49930.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc02G0031380 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0031370 AT3G27640.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0031360 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc02G0031350 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0031340 AT2G18280.2 tubby like protein 2 Member of TLP family The mRNA is cell-to-cell mobile. tubby like protein 2;(source:Araport11) Ipc02G0031330 AT5G03260.1 laccase 11 LAC11 is a putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 11;(source:Araport11) Ipc02G0031320 AT1G12060.1 BCL-2-associated athanogene 5 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 5;(source:Araport11) Ipc02G0031310 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc02G0031300 AT5G40770.1 prohibitin 3 prohibitin 3 prohibitin 3;(source:Araport11) Ipc02G0031290 AT5G14290.1 Mitochondrial ribosomal protein L37 0 Mitochondrial ribosomal protein L37;(source:Araport11) Ipc02G0031280 AT2G18245.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0031270 AT4G36530.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0031260 AT3G53620.1 pyrophosphorylase 4 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. The mRNA is cell-to-cell mobile. pyrophosphorylase 4;(source:Araport11) Ipc02G0031250 AT1G19580.1 gamma carbonic anhydrase 1 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase 1;(source:Araport11) Ipc02G0031240 AT3G01420.1 Peroxidase superfamily protein Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc02G0031230 AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein Mitochondria localized, hypoxia induced gene similar to rice HIGD. hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0031220 AT3G28860.1 ATP binding cassette subfamily B19 Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. ATP binding cassette subfamily B19;(source:Araport11) Ipc02G0031210 AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc02G0031200 AT4G10550.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc02G0031190 AT1G26830.1 cullin 3 Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3;(source:Araport11) Ipc02G0031180 AT2G22480.1 phosphofructokinase 5 0 phosphofructokinase 5;(source:Araport11) Ipc02G0031170 AT5G39785.5 0 0 hypothetical protein (DUF1666);(source:Araport11) Ipc02G0031160 AT5G15210.1 homeobox protein 30 Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family. homeobox protein 30;(source:Araport11) Ipc02G0031150 AT5G15230.1 GAST1 protein homolog 4 Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity. GAST1 protein homolog 4;(source:Araport11) Ipc02G0031140 #N/A #N/A #N/A #N/A Ipc02G0031130 AT5G37820.1 NOD26-like intrinsic protein 4;2 0 NOD26-like intrinsic protein 4;(source:Araport11) Ipc02G0031120 AT5G39660.3 0 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2;(source:Araport11) Ipc02G0031110 AT1G80370.1 Cyclin A2;4 Encodes a A2-type cyclin. Contributes to the fine-tuning of local proliferation during plant development. Cyclin A2;(source:Araport11) Ipc02G0031100 AT5G39670.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0031090 AT1G69530.2 expansin A1 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1;(source:Araport11) Ipc02G0031080 AT3G01150.1 polypyrimidine tract-binding protein 1 Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination. polypyrimidine tract-binding protein 1;(source:Araport11) Ipc02G0031070 AT5G15270.3 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc02G0031060 AT5G39610.1 NAC domain containing protein 6 Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. NAC domain containing protein 6;(source:Araport11) Ipc02G0031050 AT1G14040.1 EXS (ERD1/XPR1/SYG1) family protein Encodes a PHO1 homologue that is upregulated in response to Zn deficiency and is involved in Pi homeostasis in response to Zn deficiency. The mRNA is cell-to-cell mobile. EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc02G0031040 AT3G01140.2 0 Encodes a MIXTA-like MYB gene NOECK (NOK). Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching. myb domain protein 106;(source:Araport11) Ipc02G0031030 AT5G15330.1 SPX domain gene 4 0 SPX domain-containing protein 4;(source:Araport11) Ipc02G0031020 AT1G14040.1 EXS (ERD1/XPR1/SYG1) family protein Encodes a PHO1 homologue that is upregulated in response to Zn deficiency and is involved in Pi homeostasis in response to Zn deficiency. The mRNA is cell-to-cell mobile. EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc02G0031010 AT1G14040.1 EXS (ERD1/XPR1/SYG1) family protein Encodes a PHO1 homologue that is upregulated in response to Zn deficiency and is involved in Pi homeostasis in response to Zn deficiency. The mRNA is cell-to-cell mobile. EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc02G0031000 AT1G14010.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc02G0030990 AT5G39530.1 Protein of unknown function (DUF1997) 0 hypothetical protein (DUF1997);(source:Araport11) Ipc02G0030980 AT3G01100.1 hypothetical protein 1 unknown protein, has cDNAs and ESTs associated to it hypothetical protein 1;(source:Araport11) Ipc02G0030970 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc02G0030960 AT3G01090.2 SNF1 kinase homolog 10 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10;(source:Araport11) Ipc02G0030950 AT3G29180.3 0 0 DUF1336 family protein (DUF1336);(source:Araport11) Ipc02G0030940 AT1G74330.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0030930 AT1G13960.1 WRKY DNA-binding protein 4 Encodes WRKY DNA-binding protein 4 (WRKY4). WRKY DNA-binding protein 4;(source:Araport11) Ipc02G0030920 AT3G29185.1 Domain of unknown function (DUF3598) Encodes a chloroplast protein that interacts with the CF1β, γ, and ε subunits of the chloroplast ATP synthase and is required for assembly of its F1 module. The protein is comprised primarily of two β-barrels and acts as a chaperone orchestrating the early steps of the CF1 assembly pathway via specific interaction with the CF1 β, γ, and ε subunits. glutamate NMDA receptor subunit epsilon-1, putative (DUF3598);(source:Araport11) Ipc02G0030910 AT5G15350.1 early nodulin-like protein 17 0 early nodulin-like protein 17;(source:Araport11) Ipc02G0030900 AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0030890 AT1G69360.1 Plant protein of unknown function (DUF863) 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc02G0030880 AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0030870 AT5G15410.1 Cyclic nucleotide-regulated ion channel family protein 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens. CNGC2 could be the key step mediating bulk Ca2+ influx into leaf cells after unloading from the vascular and have no direct roles in the leaf development and HR. Cyclic nucleotide-regulated ion channel family protein;(source:Araport11) Ipc02G0030860 AT3G01060.1 0 0 lysine-tRNA ligase;(source:Araport11) Ipc02G0030850 AT5G15450.1 casein lytic proteinase B3 Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3;(source:Araport11) Ipc02G0030840 AT3G01050.5 0 0 membrane-anchored ubiquitin-fold protein 1 precursor;(source:Araport11) Ipc02G0030830 AT3G01040.3 0 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 13;(source:Araport11) Ipc02G0030820 AT3G29320.1 Glycosyl transferase, family 35 Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose. The mRNA is cell-to-cell mobile. Glycosyl transferase, family 35;(source:Araport11) Ipc02G0030810 AT5G15490.1 UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein;(source:Araport11) Ipc02G0030800 AT5G15510.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc02G0030790 AT5G15520.1 Ribosomal protein S19e family protein 0 Ribosomal protein S19e family protein;(source:Araport11) Ipc02G0030780 AT3G02090.1 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc02G0030770 AT1G62940.1 acyl-CoA synthetase 5 encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. acyl-CoA synthetase 5;(source:Araport11) Ipc02G0030760 AT5G39250.2 0 0 F-box family protein;(source:Araport11) Ipc02G0030750 AT4G29580.2 Cytidine/deoxycytidylate deaminase family protein 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc02G0030740 AT3G29370.1 0 Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. hypothetical protein;(source:Araport11) Ipc02G0030730 AT1G69830.1 alpha-amylase-like 3 Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. alpha-amylase-like 3;(source:Araport11) Ipc02G0030720 AT3G02130.1 receptor-like protein kinase 2 Encodes a receptor-like kinase RPK2 (also known as TOADSTOOL 2/TOAD2). Functions as a regulator of meristem maintenance. Mutants are insensitive to synthetic CLV3 peptide. Mutations in the RPK2 also result in stem cell expansion and increased number of floral organs, as seen in the other clv mutants. Forms homo-oligomers. receptor-like protein kinase 2;(source:Araport11) Ipc02G0030710 AT1G74160.1 0 Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation. LONGIFOLIA protein;(source:Araport11) Ipc02G0030700 AT3G29760.5 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc02G0030690 AT3G29770.1 methyl esterase 11 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 11;(source:Araport11) Ipc02G0030680 AT1G69230.2 SPIRAL1-like2 SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. SPIRAL1-like2;(source:Araport11) Ipc02G0030670 AT3G29780.1 ralf-like 27 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 27;(source:Araport11) Ipc02G0030660 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc02G0030650 AT3G02220.1 0 0 small acidic-like protein;(source:Araport11) Ipc02G0030640 AT5G60920.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc02G0030630 AT5G15630.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc02G0030620 AT3G29970.1 B12D protein 0 B12D protein;(source:Araport11) Ipc02G0030610 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc02G0030600 AT3G61060.1 phloem protein 2-A13 0 phloem protein 2-A13;(source:Araport11) Ipc02G0030590 AT5G15710.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0030580 AT3G30390.3 0 Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc02G0030570 AT3G02380.1 CONSTANS-like 2 homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins CONSTANS-like 2;(source:Araport11) Ipc02G0030560 AT1G13680.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc02G0030550 AT5G08100.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc02G0030540 AT5G38970.1 brassinosteroid-6-oxidase 1 Encodes a polypeptide involved in the C-6 oxidation of brassinosteroids. Heterologous expression of the protein in yeast conferred the ability to catalyze multiple reactions in which the C-6 position of 6-deoxocastasterone, 6-deoxotyphasterol, 3-dehydro-6-deoxoteasterone and 6-deoxoteasterone are oxidized. brassinosteroid-6-oxidase 1;(source:Araport11) Ipc02G0030530 AT5G15810.1 N2,N2-dimethylguanosine tRNA methyltransferase 0 tRNA (guanine(26)-N(2))-dimethyltransferase;(source:Araport11) Ipc02G0030520 AT1G50420.1 scarecrow-like 3 Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). scarecrow-like 3;(source:Araport11) Ipc02G0030510 AT3G02300.2 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc02G0030500 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0030490 AT5G38900.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc02G0030480 AT5G38895.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0030470 AT5G38880.1 0 0 HAUS augmin-like complex subunit;(source:Araport11) Ipc02G0030460 AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc02G0030450 AT5G15750.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 0 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein;(source:Araport11) Ipc02G0030440 AT1G69010.1 BES1-interacting Myc-like protein 2 Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BES1-interacting Myc-like protein 2;(source:Araport11) Ipc02G0030430 AT3G30300.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0030420 AT5G15720.1 GDSL-motif lipase 7 Contains lipase signature motif and GDSL domain. GDSL-motif lipase 7;(source:Araport11) Ipc02G0030410 AT5G15710.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0030400 AT5G38840.1 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc02G0030390 AT5G15680.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0030380 AT3G30390.3 0 Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc02G0030370 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0030360 AT5G08139.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0030350 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0030340 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc02G0030330 AT4G25760.1 glutamine dumper 2 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 2;(source:Araport11) Ipc02G0030320 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc02G0030310 AT3G02380.1 CONSTANS-like 2 homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins CONSTANS-like 2;(source:Araport11) Ipc02G0030300 AT5G16000.1 NSP-interacting kinase 1 NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). NSP-interacting kinase 1;(source:Araport11) Ipc02G0030290 AT3G02490.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0030280 AT5G38720.1 0 RRP7 shares limited sequence similarity to human and yeast RRP7. In Arabidopsis RRP7 functions in 18S ribosomal RNA maturation. ribosomal RNA-processing 7 protein;(source:Araport11) Ipc02G0030270 AT3G25570.2 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc02G0030260 AT4G06598.2 0 0 basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc02G0030250 AT1G67170.2 0 0 sarcolemmal membrane-associated protein;(source:Araport11) Ipc02G0030240 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc02G0030230 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc02G0030220 AT5G15880.1 0 0 golgin family A protein;(source:Araport11) Ipc02G0030210 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc02G0030200 AT3G02420.1 0 0 dihydroflavonol 4-reductase/flavanone protein;(source:Araport11) Ipc02G0030190 AT5G15860.1 prenylcysteine methylesterase Encodes a protein with prenylcysteine methylesterase activity. prenylcysteine methylesterase;(source:Araport11) Ipc02G0030180 AT5G07800.1 Flavin-binding monooxygenase family protein 0 Flavin-binding monooxygenase family protein;(source:Araport11) Ipc02G0030170 AT5G38600.1 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein 0 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0030160 AT1G79000.3 0 Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. histone acetyltransferase of the CBP family 1;(source:Araport11) Ipc02G0030150 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc02G0030140 AT5G38630.1 cytochrome B561-1 Encodes for cytochrome b561. cytochrome B561-1;(source:Araport11) Ipc02G0030130 AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0030120 AT4G34320.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc02G0030110 AT4G36850.1 PQ-loop repeat family protein / transmembrane family protein 0 PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) Ipc02G0030100 AT1G19690.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0030090 AT2G33580.1 Protein kinase superfamily protein Encodes a putative LysM-containing receptor-like kinase. LYK5 is a major chitin receptor and forms a chitin-induced complex with related kinase CERK1. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. Protein kinase superfamily protein;(source:Araport11) Ipc02G0030080 AT4G36860.1 LIM domain-containing protein DAR1 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. LIM domain-containing protein;(source:Araport11) Ipc02G0030070 AT4G36870.2 BEL1-like homeodomain 2 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves. BEL1-like homeodomain 2;(source:Araport11) Ipc02G0030060 AT3G50780.2 0 0 BTB/POZ domain protein;(source:Araport11) Ipc02G0030050 AT5G66600.9 0 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc02G0030040 AT3G50820.1 photosystem II subunit O-2 Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII. photosystem II subunit O-2;(source:Araport11) Ipc02G0030030 AT5G66560.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0030020 AT4G37210.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0030010 AT2G23670.1 homolog of Synechocystis YCF37 0 homolog of Synechocystis YCF37;(source:Araport11) Ipc02G0030000 AT2G23450.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0029990 AT4G37090.1 0 0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase;(source:Araport11) Ipc02G0029980 AT3G50380.2 0 0 vacuolar protein sorting-associated protein, putative (DUF1162);(source:Araport11) Ipc02G0029970 AT3G18990.1 AP2/B3-like transcriptional factor family protein Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc02G0029960 AT4G00260.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc02G0029950 AT2G23530.1 Zinc-finger domain of monoamine-oxidase A repressor R1 0 Zinc-finger domain of monoamine-oxidase A repressor R1;(source:Araport11) Ipc02G0029940 AT4G37130.1 hydroxyproline-rich glycoprotein family protein Encodes a member of the Nup62 subcomplex of the Arabidopsis NPC. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0029930 AT3G50420.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0029920 AT2G23610.1 methyl esterase 3 Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro. methyl esterase 3;(source:Araport11) Ipc02G0029910 AT3G61040.2 cytochrome P450, family 76, subfamily C, polypeptide 7 encodes a protein with cytochrome P450 domain cytochrome P450, family 76, subfamily C, polypeptide 7;(source:Araport11) Ipc02G0029900 AT2G45560.3 0 cytochrome P450 monooxygenase cytochrome P450, family 76, subfamily C, polypeptide 1;(source:Araport11) Ipc02G0029890 AT5G47650.5 0 Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress. nudix hydrolase homolog 2;(source:Araport11) Ipc02G0029880 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc02G0029870 AT2G45560.3 0 cytochrome P450 monooxygenase cytochrome P450, family 76, subfamily C, polypeptide 1;(source:Araport11) Ipc02G0029860 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc02G0029850 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc02G0029840 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc02G0029830 AT2G45560.3 0 cytochrome P450 monooxygenase cytochrome P450, family 76, subfamily C, polypeptide 1;(source:Araport11) Ipc02G0029820 AT3G50440.1 methyl esterase 10 Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro. methylesterase;(source:Araport11) Ipc02G0029810 AT3G11900.2 0 encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters. aromatic and neutral transporter 1;(source:Araport11) Ipc02G0029800 AT5G60200.1 TARGET OF MONOPTEROS 6 Encodes a Dof-type transcription factor. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. TARGET OF MONOPTEROS 6;(source:Araport11) Ipc02G0029790 AT4G37160.1 SKU5 similar 15 0 SKU5 similar 15;(source:Araport11) Ipc02G0029780 AT3G61040.2 cytochrome P450, family 76, subfamily C, polypeptide 7 encodes a protein with cytochrome P450 domain cytochrome P450, family 76, subfamily C, polypeptide 7;(source:Araport11) Ipc02G0029770 AT5G66920.1 SKU5 similar 17 0 SKU5 similar 17;(source:Araport11) Ipc02G0029760 AT5G66880.2 0 encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.The mRNA is cell-to-cell mobile. sucrose nonfermenting 1(SNF1)-related protein kinase 2.3;(source:Araport11) Ipc02G0029750 AT5G66860.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain 0 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein;(source:Araport11) Ipc02G0029740 AT1G49570.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0029730 AT3G50530.1 CDPK-related kinase CDPK-related kinase CDPK-related kinase;(source:Araport11) Ipc02G0029720 AT5G66840.2 0 0 SAP domain-containing protein;(source:Araport11) Ipc02G0029710 AT5G66840.2 0 0 SAP domain-containing protein;(source:Araport11) Ipc02G0029700 AT3G50560.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0029690 AT5G66820.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0029680 AT3G58160.4 0 Class XI myosin gene expressed in flowers from 4-6 week old plants and leaves from 3 week old plants P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0029670 AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0029660 AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity. Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc02G0029650 AT4G37040.1 methionine aminopeptidase 1D encodes a methionine aminopeptidase methionine aminopeptidase 1D;(source:Araport11) Ipc02G0029640 AT2G38910.1 calcium-dependent protein kinase 20 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 20;(source:Araport11) Ipc02G0029630 AT1G49620.3 0 Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. Cyclin-dependent kinase inhibitor family protein;(source:Araport11) Ipc02G0029620 AT4G37030.1 0 0 membrane protein;(source:Araport11) Ipc02G0029610 AT3G50370.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0029600 AT3G50360.1 centrin2 CAM like protein with four EF-hand domains. Binds calcium. Loss of function mutants affect ABA regulation of guard cell channels and accumulation of stress responsive transcripts(PMID:28603528). centrin2;(source:Araport11) Ipc02G0029590 AT4G36990.1 heat shock factor 4 Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. heat shock factor 4;(source:Araport11) Ipc02G0029580 AT4G36980.2 0 0 CLK4-associating serine/arginine-rich protein;(source:Araport11) Ipc02G0029570 AT5G67020.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0029560 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0029550 AT5G67030.1 zeaxanthin epoxidase (ZEP) (ABA1) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. zeaxanthin epoxidase (ZEP) (ABA1);(source:Araport11) Ipc02G0029540 AT5G67070.1 ralf-like 34 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile. ralf-like 34;(source:Araport11) Ipc02G0029530 AT5G67080.1 mitogen-activated protein kinase kinase kinase 19 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 19;(source:Araport11) Ipc02G0029520 AT5G67030.1 zeaxanthin epoxidase (ZEP) (ABA1) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. zeaxanthin epoxidase (ZEP) (ABA1);(source:Araport11) Ipc02G0029510 AT5G67030.2 zeaxanthin epoxidase (ZEP) (ABA1) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. zeaxanthin epoxidase (ZEP) (ABA1);(source:Araport11) Ipc02G0029500 AT1G49740.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc02G0029490 AT5G67100.2 0 Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering. DNA-directed DNA polymerase;(source:Araport11) Ipc02G0029480 AT4G34050.3 0 Methyltransferase in the lignin biosynthetic pathway. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0029470 AT2G23360.1 Plant protein of unknown function (DUF869) 0 filament-like protein (DUF869);(source:Araport11) Ipc02G0029460 AT5G67190.1 DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 2;(source:Araport11) Ipc02G0029450 AT3G57870.1 sumo conjugation enzyme 1 Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name. sumo conjugation enzyme 1;(source:Araport11) Ipc02G0029440 AT1G49750.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0029430 AT3G19320.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0029420 AT5G67220.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc02G0029410 AT4G24240.1 WRKY DNA-binding protein 7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. WRKY DNA-binding protein 7;(source:Araport11) Ipc02G0029400 AT3G19420.1 PTEN 2 Encodes a phosphatase with low in vitro tyrosine phosphatase activity that is capable of dephosphorylating in vitro the 3'phosphate group of PI3P, PI(3,4)P2, and PI(3,5)P2 and may be an effector of lipid signaling. The mRNA is cell-to-cell mobile. PTEN 2;(source:Araport11) Ipc02G0029390 AT1G47056.1 VIER F-box proteine 1 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. VIER F-box protein 1;(source:Araport11) Ipc02G0029380 AT4G24204.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0029370 AT5G18470.1 Curculin-like (mannose-binding) lectin family protein 0 Curculin-like (mannose-binding) lectin family protein;(source:Araport11) Ipc02G0029360 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc02G0029350 AT1G10630.2 0 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1F;(source:Araport11) Ipc02G0029340 AT5G67270.1 end binding protein 1C encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. end binding protein 1C;(source:Araport11) Ipc02G0029330 AT2G23300.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0029320 AT4G37280.1 MRG family protein 0 MRG family protein;(source:Araport11) Ipc02G0029310 AT4G37330.1 cytochrome P450, family 81, subfamily D, polypeptide 4 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 4;(source:Araport11) Ipc02G0029300 AT4G37300.1 maternal effect embryo arrest 59 0 maternal effect embryo arrest 59;(source:Araport11) Ipc02G0029290 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc02G0029280 AT2G23150.1 natural resistance-associated macrophage protein 3 Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. natural resistance-associated macrophage protein 3;(source:Araport11) Ipc02G0029270 AT2G39540.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc02G0029260 AT4G34280.1 transducin family protein / WD-40 repeat family protein Encodes a putative substrate receptor for the cullin4-RING ubiquitin E3 ligase complex that is involved in negative regulation of plant UV-B response. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0029250 AT4G37450.1 arabinogalactan protein 18 AGP18 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP17 and AGP19, other lysine-rich AGPs. It is expressed in young leaves, shoots, roots and flowers and is active in the regulation of the selection and survival of megaspores. arabinogalactan protein 18;(source:Araport11) Ipc02G0029240 AT4G37470.1 alpha/beta-Hydrolases superfamily protein HTL belonging to the alpha/beta fold hydrolase superfamily. Mutant and over-expression studies indicates its involvement in seedling de-etiolation process. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0029230 AT2G14750.1 APS kinase Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability. The mRNA is cell-to-cell mobile. APS kinase;(source:Araport11) Ipc02G0029220 AT5G67350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0029210 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc02G0029200 AT4G37480.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0029190 AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0029180 AT2G23093.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0029170 AT4G24230.6 acyl-CoA-binding domain 3 acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. Microarray data shows up-regulation of many biotic- and abiotic-stress-related genes in an ACBP3 OE-1 in comparison to wild type. acyl-CoA-binding domain 3;(source:Araport11) Ipc02G0029160 AT5G67385.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0029150 AT5G67390.3 0 0 glycosyltransferase-like protein;(source:Araport11) Ipc02G0029140 AT2G14850.1 0 0 transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11) Ipc02G0029130 AT4G37540.1 LOB domain-containing protein 39 0 LOB domain-containing protein 39;(source:Araport11) Ipc02G0029120 AT2G23070.1 Protein kinase superfamily protein Encodes a chloroplast localized subunit of casien kinase4. Functions reduntantly with other alpha subunits (1, 2,and 3) in ABA mediated suppression of seed germination, lateral root development and flowering time. Protein kinase superfamily protein;(source:Araport11) Ipc02G0029110 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0029100 AT2G23070.1 Protein kinase superfamily protein Encodes a chloroplast localized subunit of casien kinase4. Functions reduntantly with other alpha subunits (1, 2,and 3) in ABA mediated suppression of seed germination, lateral root development and flowering time. Protein kinase superfamily protein;(source:Araport11) Ipc02G0029090 AT4G37580.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein involved in apical hook development. putative N-acetyltransferase Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc02G0029080 AT4G37608.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0029070 AT5G67470.1 formin homolog 6 0 formin homolog 6;(source:Araport11) Ipc02G0029060 AT5G67480.3 0 BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves. BTB and TAZ domain protein 4;(source:Araport11) Ipc02G0029050 AT5G67500.3 0 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.The mRNA is cell-to-cell mobile. voltage dependent anion channel 2;(source:Araport11) Ipc02G0029040 AT3G49910.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc02G0029030 AT3G49900.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0029020 AT4G37650.1 GRAS family transcription factor Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT-ROOT forms a network in combination with JACKDAW, BLUEJAY AND SCARECROW to regulate tissue patterning through asymmetric cell division. The ground tissue lineage remains in shortroot mutant, while it is progressively lost in the triple mutant bluejay jackdaw scarecrow and double mutant jackdaw scarecrow. In addition, ground tissue basal identity remains in shortroot mutant while it is defective in the quadruple mutant bluejay jackdaw magpie nutcracker. GRAS family transcription factor;(source:Araport11) Ipc02G0029010 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0029000 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0028990 AT5G67500.3 0 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.The mRNA is cell-to-cell mobile. voltage dependent anion channel 2;(source:Araport11) Ipc02G0028980 AT3G49910.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc02G0028970 AT3G49870.1 ADP-ribosylation factor-like A1C A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. ADP-ribosylation factor-like A1C;(source:Araport11) Ipc02G0028960 AT1G49950.3 telomere repeat binding factor 1 Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.Mutations in TRB1 and TRB3 enhance the lhp1 mutant phenotype. Triple mutants are more strongly affected than the respective double mutants with lhp1. TRB1 binds non-H3K27me3 target genes predominantly at the transcription start sites and its presence increases the expression of several of these targets, enriched for functions of primary metabolism. At H3K27me3 target genes, TRB1 binding is more distributed across gene bodies and at extended promoter regions, corresponding to an enrichment of putative binding sites "RMCCTAR". At these genes, TRB1 particiaptes in the repression because several direct targets are further upregulated in trb1 lhp1 double mutants as compared to lhp1 mutants. telomere repeat binding factor 1;(source:Araport11) Ipc02G0028950 AT5G67590.1 NADH-ubiquinone oxidoreductase-related Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain. The mRNA is cell-to-cell mobile. NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc02G0028940 AT2G22910.1 N-acetyl-l-glutamate synthase 1 0 N-acetyl-l-glutamate synthase 1;(source:Araport11) Ipc02G0028930 AT1G13860.2 QUASIMODO2 LIKE 1 Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. QUASIMODO2 LIKE 1;(source:Araport11) Ipc02G0028920 AT5G67620.1 0 0 DUF4228 domain protein;(source:Araport11) Ipc02G0028910 AT4G37690.1 Galactosyl transferase GMA12/MNN10 family protein Unlike its close paralog MUCI10 (At2g22900), GT6 is not required for the biosynthesis of seed coat mucilage. GT6 is preferentially expressed in sub-epidermal cell layers of the seed coat. Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc02G0028900 AT5G13930.1 Chalcone and stilbene synthase family protein Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. The mRNA is cell-to-cell mobile. Chalcone and stilbene synthase family protein;(source:Araport11) Ipc02G0028890 AT1G10140.1 Uncharacterised conserved protein UCP031279 0 Uncharacterized conserved protein UCP031279;(source:Araport11) Ipc02G0028880 AT2G22880.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc02G0028870 AT5G65890.3 0 Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques. ACT domain repeat 1;(source:Araport11) Ipc02G0028860 AT3G49780.1 phytosulfokine 4 precursor Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype. phytosulfokine 4 precursor;(source:Araport11) Ipc02G0028850 AT4G37750.1 Integrase-type DNA-binding superfamily protein ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed in the chalaza, floral organ primordia, and lateral shoot organ primordia. Regulates growth and cell numbers during organogenesis. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc02G0028840 AT2G14520.2 0 0 CBS domain protein (DUF21);(source:Araport11) Ipc02G0028830 AT3G49720.3 0 Encodes CGR2 (cotton Golgi-related 2). CGR2 and a close homologue CGR3 have overlapping roles in plant growth and pectin methylesterification in the Golgi apparatus. transmembrane protein;(source:Araport11) Ipc02G0028820 AT3G49690.1 myb domain protein 84 Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. myb domain protein 84;(source:Araport11) Ipc02G0028810 AT5G65770.3 little nuclei4 Encodes a protein that localizes to the nuclear periphery and affects nuclear morphology. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei4;(source:Araport11) Ipc02G0028800 AT5G16180.1 ortholog of maize chloroplast splicing factor CRS1 Promotes the splicing of chloroplast group II introns. Splices atpF introns. maize chloroplast splicing factor-like protein;(source:Araport11) Ipc02G0028790 AT5G65720.3 0 Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin). nitrogen fixation S (NIFS)-like 1;(source:Araport11) Ipc02G0028780 AT4G33740.5 0 0 myb-like protein X;(source:Araport11) Ipc02G0028770 AT5G67020.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0028760 AT1G48310.2 0 0 chromatin remodeling factor18;(source:Araport11) Ipc02G0028750 AT1G62670.2 0 Encodes a pentatricopeptide repeat protein required for 5 Prime end processing of nad9 and cox3 mRNAs in mitochondria. rna processing factor 2;(source:Araport11) Ipc02G0028740 AT5G65710.1 HAESA-like 2 Encodes a protein controlling the separation step of floral organ abscission.Necessary for pathogen-triggered leaf abscission. HAESA-like 2;(source:Araport11) Ipc02G0028730 AT5G65700.2 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc02G0028720 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0028710 AT1G79220.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc02G0028700 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0028690 AT1G06810.1 0 0 endonuclease/glycosyl hydrolase;(source:Araport11) Ipc02G0028680 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0028670 AT3G49660.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0028660 AT3G49650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0028650 AT4G37880.1 LisH/CRA/RING-U-box domains-containing protein 0 LisH/CRA/RING-U-box domains-containing protein;(source:Araport11) Ipc02G0028640 AT5G62070.1 IQ-domain 23 0 IQ-domain 23;(source:Araport11) Ipc02G0028630 AT1G63120.1 RHOMBOID-like 2 AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2;(source:Araport11) Ipc02G0028620 AT5G07280.1 Leucine-rich repeat transmembrane protein kinase Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc02G0028610 AT5G52180.1 0 0 transmembrane protein 161AB protein;(source:Araport11) Ipc02G0028600 AT5G52200.1 phosphoprotein phosphatase inhibitors Encodes an inhibitor of protein phosphatase one (PP1). phosphoprotein phosphatase inhibitor;(source:Araport11) Ipc02G0028590 AT5G52220.2 0 0 chromosome transmission fidelity-like protein;(source:Araport11) Ipc02G0028580 AT5G52240.1 membrane steroid binding protein 1 Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. The mRNA is cell-to-cell mobile. membrane steroid binding protein 1;(source:Araport11) Ipc02G0028570 AT4G00585.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0028560 AT3G48900.2 single-stranded DNA endonuclease family protein Encodes one of two GEN1 homologs in Arabidopsis. It is a member of the class IV Rad2/XPG family of nucleases that processes Holliday junctions in a manner analogous to the HJ resolvases of phages, archaea, and bacteria. single-stranded DNA endonuclease family protein;(source:Araport11) Ipc02G0028550 AT5G23730.1 Transducin/WD40 repeat-like superfamily protein Encodes REPRESSOR OF UV-B PHOTOMORPHOGENESIS 2 (RUP2). Functions as a repressor of UV-B signaling. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0028540 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc02G0028530 AT5G52260.1 myb domain protein 19 Member of the R2R3 factor gene family. myb domain protein 19;(source:Araport11) Ipc02G0028520 AT5G52270.2 0 0 SNARE-like superfamily protein;(source:Araport11) Ipc02G0028510 AT3G48900.1 single-stranded DNA endonuclease family protein Encodes one of two GEN1 homologs in Arabidopsis. It is a member of the class IV Rad2/XPG family of nucleases that processes Holliday junctions in a manner analogous to the HJ resolvases of phages, archaea, and bacteria. single-stranded DNA endonuclease family protein;(source:Araport11) Ipc01G0027660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027670 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027680 AT1G08970.4 nuclear factor Y, subunit C9 Encodes a NUCLEAR FACTOR-Y C (NF-YC) homologue NF-YC9. NF-YC3., NF-YC4 and NF-YC9 redundantly modulate GA- and ABA-mediated seed germination. nuclear factor Y, subunit C9;(source:Araport11) Ipc01G0027690 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc01G0027700 AT2G13690.1 PRLI-interacting factor, putative 0 PRLI-interacting factor;(source:Araport11) Ipc01G0027710 AT1G15710.1 prephenate dehydrogenase family protein 0 prephenate dehydrogenase family protein;(source:Araport11) Ipc01G0027720 AT3G06080.2 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc01G0027730 AT1G36510.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc01G0027740 AT1G36510.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc01G0027750 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc01G0027760 AT5G19025.2 0 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc01G0027770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027780 AT5G46430.2 Ribosomal protein L32e 0 Ribosomal protein L32e;(source:Araport11) Ipc01G0027790 AT3G06070.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0027800 AT5G26330.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc01G0027810 AT5G26250.1 Major facilitator superfamily protein Sugar transporter expressed strongly in pollen and pollen tubes. Major facilitator superfamily protein;(source:Araport11) Ipc01G0027820 AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc01G0027830 AT5G26240.1 chloride channel D Anion channel protein family member. Involved in negative regulation of pattern triggered immunity. chloride channel D;(source:Araport11) Ipc01G0027840 AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.Functions redundantly with the beta subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc01G0027850 AT4G19600.1 Cyclin family protein Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV). The mRNA is cell-to-cell mobile. Cyclin family protein;(source:Araport11) Ipc01G0027860 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc01G0027870 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027880 AT3G05980.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0027890 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0027900 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc01G0027920 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0027930 AT1G10520.1 DNA polymerase lambda (POLL) Encodes a homolog of the mammalian DNA polymerase lambda that is involved in the repair of UV-B induced DNA damage. DNA polymerase lambda (POLL);(source:Araport11) Ipc01G0027940 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0027950 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0027960 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0027970 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc01G0027980 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc05G0022220 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc05G0022230 AT5G35570.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc05G0022240 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc05G0022250 AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0022260 AT1G79460.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway. Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc05G0022270 AT5G26160.2 0 0 light-independent protochlorophyllide reductase subunit;(source:Araport11) Ipc05G0022280 AT2G26680.1 0 0 FkbM family methyltransferase;(source:Araport11) Ipc05G0022290 AT5G15050.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14B. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc05G0022300 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0022310 AT1G40129.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0022320 AT5G19670.2 0 0 Exostosin family protein;(source:Araport11) Ipc05G0022330 AT4G32390.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc05G0022340 AT1G70320.1 ubiquitin-protein ligase 2 encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. ubiquitin-protein ligase 2;(source:Araport11) Ipc05G0022350 AT1G78950.2 0 0 Terpenoid cyclases family protein;(source:Araport11) Ipc05G0022360 AT1G52600.1 Peptidase S24/S26A/S26B/S26C family protein 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc05G0022370 AT3G57340.2 Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) 0 DnaJ heat shock amino-terminal domain protein (DUF1977);(source:Araport11) Ipc05G0022380 AT2G37990.1 ribosome biogenesis regulatory protein (RRS1) family protein 0 ribosome biogenesis regulatory protein (RRS1) family protein;(source:Araport11) Ipc05G0022390 AT2G34160.1 Alba DNA/RNA-binding protein 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc05G0022400 AT2G40390.1 0 0 neuronal PAS domain protein;(source:Araport11) Ipc05G0022410 #N/A #N/A #N/A #N/A Ipc05G0022420 AT1G10240.2 0 0 FAR1-related sequence 11;(source:Araport11) Ipc05G0022430 #N/A #N/A #N/A #N/A Ipc05G0022440 AT3G58570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0022450 AT3G22230.1 Ribosomal L27e protein family 0 Ribosomal L27e protein family;(source:Araport11) Ipc05G0022460 AT2G26830.1 Protein kinase superfamily protein Encodes a member of a small family of choline/ethanolamine kinases that is localized to the plasma membrane. Homozygous loss of function alleles are embryo lethal. Overexpression results in altered phospholipid levels suggesting a critical role in phospholipid biosynthesis. Protein kinase superfamily protein;(source:Araport11) Ipc05G0022470 AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein SAGL1 is a member of a small family of KELCH domain containing proteins. Loss of function mutants show increased lignin and anthocyanin production suggesting a role in regulation of phenylpropanoid biosynthesis. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc05G0022480 AT5G45520.2 0 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0022490 AT5G20110.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc05G0022500 AT1G15400.3 0 0 hypothetical protein;(source:Araport11) Ipc05G0022510 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0022520 AT5G61140.2 U5 small nuclear ribonucleoprotein helicase Encodes a predicted protein with 30% identity with MER3/RCK. Similar to yast Brr2p DEAD/DExH box ATP-dependent RNA helicase. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc05G0022530 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0022540 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0022550 #N/A #N/A #N/A #N/A Ipc05G0022560 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0022570 AT5G41920.1 GRAS family transcription factor Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification. GRAS family transcription factor;(source:Araport11) Ipc05G0022580 AT2G40750.1 WRKY DNA-binding protein 54 member of WRKY Transcription Factor; Group III WRKY DNA-binding protein 54;(source:Araport11) Ipc05G0022590 AT3G19360.2 0 0 Zinc finger (CCCH-type) family protein;(source:Araport11) Ipc05G0022600 AT5G43240.2 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc05G0022610 AT5G19930.2 Protein of unknown function DUF92, transmembrane PGR is putative plasma membrane glucose- responsive regulator that is expressed in response to glucose stimulation.RNAi knockdown mutant seeds have enhanced sensitivity to glucose and 2-deoxyglucose. integral membrane protein (Protein of unknown function DUF92, transmembrane);(source:Araport11) Ipc05G0022620 AT5G19950.2 Domain of unknown function (DUF1767) 0 tudor domain protein (DUF1767);(source:Araport11) Ipc05G0022630 AT1G77730.1 Pleckstrin homology (PH) domain superfamily protein 0 Pleckstrin homology (PH) domain superfamily protein;(source:Araport11) Ipc05G0022640 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0022650 AT1G79200.1 0 Encodes a nuclear localized protein involved in auxin-dependent control of cell proliferation in pistil development. Loss of function mutations have increased cell proliferation in the stigma. splicing regulatory glutamine/lysine-rich-like protein;(source:Araport11) Ipc05G0022660 AT2G35140.6 0 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc05G0022670 AT5G20140.1 SOUL heme-binding family protein Encodes a haem-binding protein, HBP5. HBP5 binds haem and interacts with the haem oxygenase, HY1. Disrupting the binding of HBP5 to HY1 leads to oxidative stress. SOUL heme-binding family protein;(source:Araport11) Ipc05G0022680 AT2G47970.2 Nuclear pore localisation protein NPL4 0 Nuclear pore localization protein NPL4;(source:Araport11) Ipc05G0022690 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0022700 AT2G26640.1 3-ketoacyl-CoA synthase 11 Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 11;(source:Araport11) Ipc05G0022710 AT1G52740.1 histone H2A protein 9 Encodes HTA9, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA11) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z. histone H2A protein 9;(source:Araport11) Ipc05G0022720 AT1G11660.4 0 0 heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc05G0022730 AT3G15610.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0022740 AT4G23800.1 HMG (high mobility group) box protein Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes. HMG (high mobility group) box protein;(source:Araport11) Ipc05G0022750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0022760 AT5G18270.1 Arabidopsis NAC domain containing protein 87 0 NAC domain containing protein 87;(source:Araport11) Ipc05G0022770 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc05G0022780 AT1G22620.1 Phosphoinositide phosphatase family protein SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization. Phosphoinositide phosphatase family protein;(source:Araport11) Ipc05G0022790 AT5G17460.5 0 0 glutamyl-tRNA (Gln) amidotransferase subunit C;(source:Araport11) Ipc05G0022800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0022810 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0022820 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc05G0022830 AT1G69530.2 expansin A1 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1;(source:Araport11) Ipc05G0022850 AT5G56350.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc05G0022840 AT5G56350.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc05G0022860 AT5G10200.3 0 0 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein;(source:Araport11) Ipc05G0022870 AT4G31780.1 monogalactosyl diacylglycerol synthase 1 Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. monogalactosyl diacylglycerol synthase 1;(source:Araport11) Ipc05G0022880 AT3G60680.1 Plant protein of unknown function (DUF641) 0 DUF641 family protein (DUF641);(source:Araport11) Ipc05G0022890 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc05G0022900 AT3G04040.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0022910 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0022920 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc05G0022930 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc05G0022940 AT1G18550.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc05G0022950 AT1G18550.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc05G0022960 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0022970 AT2G46520.1 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative 0 cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter;(source:Araport11) Ipc05G0022980 AT1G64760.2 O-Glycosyl hydrolases family 17 protein ZERZAUST is an atypical β-1,3 glucanase. The protein is localized to punctate regions of the apoplast, near cellular junctions. Mutants display aberrant floral morphology and twisted siliques and stems. Biochemcial analysis of mutant cell wall composition indicates cell wall defects. O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc05G0022990 AT1G54390.4 PHD finger protein-related ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. PHD finger protein-like protein;(source:Araport11) Ipc05G0023000 AT1G55370.2 NDH-dependent cyclic electron flow 5 0 NDH-dependent cyclic electron flow 5;(source:Araport11) Ipc05G0023010 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc05G0023020 AT3G03940.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Also acts in GA response pathway along with RGA1/CCA1. Protein kinase family protein;(source:Araport11) Ipc05G0023030 AT2G39220.1 PATATIN-like protein 6 0 PATATIN-like protein 6;(source:Araport11) Ipc05G0023040 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc05G0023050 AT5G06600.2 ubiquitin-specific protease 12 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 12;(source:Araport11) Ipc05G0023060 AT5G55000.2 potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein FH protein interacting protein FIP2 potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein;(source:Araport11) Ipc05G0023070 AT5G35910.1 Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product. Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11) Ipc05G0023080 AT5G15120.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc05G0023090 AT5G08570.3 0 0 Pyruvate kinase family protein;(source:Araport11) Ipc05G0023100 AT3G45400.1 exostosin family protein 0 exostosin family protein;(source:Araport11) Ipc05G0023110 AT2G31960.4 0 encodes a protein similar to callose synthase glucan synthase-like 3;(source:Araport11) Ipc05G0023120 AT1G58030.1 cationic amino acid transporter 2 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast. cationic amino acid transporter 2;(source:Araport11) Ipc05G0023130 AT3G47590.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0023140 #N/A #N/A #N/A #N/A Ipc05G0023160 #N/A #N/A #N/A #N/A Ipc05G0023150 AT3G16460.2 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc05G0023170 AT2G37585.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14C. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc05G0023180 AT5G37480.2 0 0 maltase-glucoamylase, intestinal protein;(source:Araport11) Ipc05G0023190 AT5G17920.2 Cobalamin-independent synthase family protein Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. Cobalamin-independent synthase family protein;(source:Araport11) Ipc05G0023200 AT1G49900.1 C2H2 type zinc finger transcription factor family 0 C2H2 type zinc finger transcription factor family;(source:Araport11) Ipc05G0023210 AT3G62800.2 double-stranded-RNA-binding protein 4 Encodes a nuclear dsRNA-binding protein DRB4 that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. Also has an impact on polymerase IV-dependent siRNA levels. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression. double-stranded-RNA-binding protein 4;(source:Araport11) Ipc05G0023220 AT2G44710.2 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0023230 AT2G03090.1 expansin A15 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A15;(source:Araport11) Ipc05G0023240 AT1G35720.1 annexin 1 Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants. The mRNA is cell-to-cell mobile. annexin 1;(source:Araport11) Ipc05G0023250 AT1G73020.3 0 0 anoctamin-like protein;(source:Araport11) Ipc05G0023260 AT3G57410.6 0 Encodes a protein with high homology to animal villin. VLN3 is a Ca2+-regulated villin involved in actin filament bundling. villin 3;(source:Araport11) Ipc05G0023270 AT3G03790.2 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein 0 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc05G0023280 AT1G52720.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0023290 AT3G22250.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0023300 #N/A #N/A #N/A #N/A Ipc08G0015150 AT4G18960.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc08G0015140 AT5G45670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0015130 AT5G45660.1 0 0 adenine phosphoribosyltransferase;(source:Araport11) Ipc08G0015120 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0015110 AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0015100 AT2G34340.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc08G0015090 AT1G29630.2 5'-3' exonuclease family protein 0 5-3 exonuclease family protein;(source:Araport11) Ipc08G0015080 AT4G18040.1 eukaryotic translation initiation factor 4E eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein. eukaryotic translation initiation factor 4E;(source:Araport11) Ipc08G0015070 AT5G46540.1 P-glycoprotein 7 0 P-glycoprotein 7;(source:Araport11) Ipc08G0015060 AT4G18050.1 P-glycoprotein 9 0 P-glycoprotein 9;(source:Araport11) Ipc08G0015050 AT2G34310.5 0 0 hypothetical protein;(source:Araport11) Ipc08G0015040 AT1G29520.1 AWPM-19-like family protein 0 AWPM-19-like family protein;(source:Araport11) Ipc08G0015030 AT5G12190.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0015020 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0015010 AT1G29400.3 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like protein 5;(source:Araport11) Ipc08G0015000 AT1G29370.1 Kinase-related protein of unknown function (DUF1296) 0 RNA polymerase II degradation factor-like protein (DUF1296);(source:Araport11) Ipc08G0014990 AT1G29820.2 Magnesium transporter CorA-like family protein 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc08G0014980 AT1G60970.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc08G0014970 AT1G29810.1 Transcriptional coactivator/pterin dehydratase 0 Transcriptional coactivator/pterin dehydratase;(source:Araport11) Ipc08G0014960 AT1G29790.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc08G0014950 AT5G03860.2 malate synthase Encodes a protein with malate synthase activity. malate synthase;(source:Araport11) Ipc08G0014940 AT4G18160.1 Ca2+ activated outward rectifying K+ channel 6 Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK3 is found in the thylakoid stromal lamellae. May form homomeric ion channels in vivo. It modulates the partitioning of the proton motive force (pmf) between the delta psi and delta pH in chloroplasts in vivo at physiological light intensities. Ca2+ activated outward rectifying K+ channel 6;(source:Araport11) Ipc08G0014930 AT2G34410.2 O-acetyltransferase family protein Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis. O-acetyltransferase family protein;(source:Araport11) Ipc08G0014920 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0014910 AT1G29930.1 chlorophyll A/B binding protein 1 Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. The mRNA is cell-to-cell mobile. chlorophyll A/B binding protein 1;(source:Araport11) Ipc08G0014900 AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein Mitochondrial ATP-independent protease Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc08G0014890 AT3G59090.1 0 0 tobamovirus multiplication protein;(source:Araport11) Ipc08G0014880 AT1G06475.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0014870 AT2G13620.1 cation/hydrogen exchanger 15 member of Putative Na+/H+ antiporter family cation/hydrogen exchanger 15;(source:Araport11) Ipc08G0014860 AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development. 3-ketoacyl-acyl carrier protein synthase I;(source:Araport11) Ipc08G0014850 AT1G73860.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0014840 AT4G21230.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 27 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 27;(source:Araport11) Ipc08G0014830 AT1G17080.1 Ribosomal protein L18ae family 0 Ribosomal protein L18ae family;(source:Araport11) Ipc08G0014820 AT2G34530.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0014810 AT1G30040.1 gibberellin 2-oxidase Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. gibberellin 2-oxidase;(source:Araport11) Ipc08G0014800 AT2G34585.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0014790 AT1G30090.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc08G0014780 AT1G30100.1 nine-cis-epoxycarotenoid dioxygenase 5 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 5;(source:Araport11) Ipc08G0014770 AT2G34590.1 Transketolase family protein 0 Transketolase family protein;(source:Araport11) Ipc08G0014760 AT1G30130.3 0 0 DUF1365 family protein;(source:Araport11) Ipc08G0014750 AT5G41830.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc08G0014740 AT1G30135.1 jasmonate-zim-domain protein 8 0 jasmonate-zim-domain protein 8;(source:Araport11) Ipc08G0014730 AT3G09770.2 RING/U-box superfamily protein Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion. RING/U-box superfamily protein;(source:Araport11) Ipc08G0014720 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc08G0014710 AT4G18360.4 0 Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc08G0014700 AT3G05060.1 NOP56-like pre RNA processing ribonucleoprotein SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NOP56-like pre RNA processing ribonucleoprotein;(source:Araport11) Ipc08G0014690 AT2G42800.1 receptor like protein 29 0 receptor like protein 29;(source:Araport11) Ipc08G0014680 AT1G17180.1 glutathione S-transferase TAU 25 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Detoxification of the environmental pollutant 2,4,6-trinitrotoluene. Arabidopsis plant over-expressing At1g17180 were more resistant to TNT, removed more TNT from sterile and soil-based media, and had reduced levels of glutathione when grown in the presence of TNT. glutathione S-transferase TAU 25;(source:Araport11) Ipc08G0014670 AT5G46170.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0014660 AT5G38520.1 alpha/beta-Hydrolases superfamily protein CLD1 is involved in steady-state chlorophyll turnover; CLD1 dephytylates chlorophyll a, chlorophyll b, and pheophytin a in vitro; CLD1 and CHLG form a salvage cycle in recycling chlorophyll. Suppression of CLD1 expression results in reduced tolerance to moderately high temperature. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0014650 AT4G18390.2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2;(source:Araport11) Ipc08G0014640 AT2G34630.2 geranyl diphosphate synthase 1 Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal. geranyl diphosphate synthase 1;(source:Araport11) Ipc08G0014630 AT1G30300.4 0 0 Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc08G0014620 #N/A #N/A #N/A #N/A Ipc08G0014610 AT1G30320.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc08G0014600 AT2G34640.1 plastid transcriptionally active 12 Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. plastid transcriptionally active 12;(source:Araport11) Ipc08G0014590 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0014580 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0014570 AT5G62100.2 BCL-2-associated athanogene 2 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 2;(source:Araport11) Ipc08G0014560 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0014550 AT5G51230.1 VEFS-Box of polycomb protein Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. VEFS-Box of polycomb protein;(source:Araport11) Ipc08G0014540 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc08G0014530 AT5G51230.1 VEFS-Box of polycomb protein Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. VEFS-Box of polycomb protein;(source:Araport11) Ipc08G0014520 AT4G21070.1 breast cancer susceptibility1 Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control. breast cancer susceptibility1;(source:Araport11) Ipc08G0014510 AT4G05460.1 RNI-like superfamily protein Encodes a SKP1/ASK-Interacting protein. RNI-like superfamily protein;(source:Araport11) Ipc08G0014500 AT4G05460.1 RNI-like superfamily protein Encodes a SKP1/ASK-Interacting protein. RNI-like superfamily protein;(source:Araport11) Ipc08G0014490 AT2G34650.1 Protein kinase superfamily protein Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID. Protein kinase superfamily protein;(source:Araport11) Ipc08G0014480 AT5G03360.1 DC1 domain-containing protein 0 cysteine/histidine-rich C1 domain protein;(source:Araport11) Ipc08G0014470 AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative 0 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP;(source:Araport11) Ipc08G0014460 AT5G06970.1 Protein of unknown function (DUF810) PATROL1 is a Munc13-like protein involved in mediating H[+]-ATPase translocation. It interacts with AHA1and is responsible for its translocation during stomatal movement. plant/protein (DUF810);(source:Araport11) Ipc08G0014450 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc08G0014440 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc08G0014420 AT2G19150.2 0 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0014430 AT3G16230.2 Predicted eukaryotic LigT 0 Putative eukaryotic LigT;(source:Araport11) Ipc08G0014410 AT4G36080.2 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases Component of the SPT module of the SAGA complex. phosphotransferases/inositol or phosphatidylinositol kinase;(source:Araport11) Ipc08G0014400 AT3G04780.1 Protein of unknown function (DUF1000) Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein. PITH domain protein (DUF1000);(source:Araport11) Ipc08G0014390 AT5G14980.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0014380 AT1G30450.3 cation-chloride co-transporter 1 member of Cation-chloride co-transporter family cation-chloride co-transporter 1;(source:Araport11) Ipc08G0014370 AT5G45190.1 Cyclin family protein Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV). Cyclin family protein;(source:Araport11) Ipc08G0014360 AT4G21120.1 amino acid transporter 1 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. The mRNA is cell-to-cell mobile. amino acid transporter 1;(source:Araport11) Ipc08G0014350 AT2G34690.1 Glycolipid transfer protein (GLTP) family protein Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens. The mRNA is cell-to-cell mobile. Glycolipid transfer protein (GLTP) family protein;(source:Araport11) Ipc08G0014340 AT1G30460.1 cleavage and polyadenylation specificity factor 30 Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion. cleavage and polyadenylation specificity factor 30;(source:Araport11) Ipc08G0014330 AT5G62270.1 0 0 ribosomal protein L20;(source:Araport11) Ipc08G0014320 AT5G16080.1 carboxyesterase 17 0 carboxyesterase 17;(source:Araport11) Ipc08G0014310 AT5G11470.2 0 SG1 is a Bromo-Adjacent Homology (BAH) domain containing protein involved in CHG methylation within genebodies. Loss of function results in pleiotrophic developmental effects that increase after 4 generations. bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc08G0014300 AT1G07390.2 receptor like protein 1 0 receptor like protein 1;(source:Araport11) Ipc08G0014290 AT2G25470.2 0 0 receptor like protein 21;(source:Araport11) Ipc08G0014280 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0014270 AT2G25470.2 0 0 receptor like protein 21;(source:Araport11) Ipc08G0014260 AT2G25470.2 0 0 receptor like protein 21;(source:Araport11) Ipc08G0014250 AT2G25470.3 0 0 receptor like protein 21;(source:Araport11) Ipc08G0014240 AT3G29130.6 0 0 kxDL motif protein;(source:Araport11) Ipc08G0014230 AT4G21160.4 Calcium-dependent ARF-type GTPase activating protein family ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11) Ipc08G0014220 AT1G30500.2 nuclear factor Y, subunit A7 0 nuclear factor Y, subunit A7;(source:Araport11) Ipc08G0014210 AT3G04280.3 response regulator 22 Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators. response regulator 22;(source:Araport11) Ipc08G0014200 AT1G30580.1 GTP binding 0 GTP binding protein;(source:Araport11) Ipc08G0014190 AT4G20940.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma-membrane localized LRR receptor-like protein involved in both ABA and H202 mediated signaling involved in stomatal movement. TAIR10 annotation for this gene has a low confidence score (2-star). See Comments field for structural annotation by the community. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0014180 AT5G23860.2 tubulin beta 8 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile. tubulin beta 8;(source:Araport11) Ipc08G0014170 AT4G20880.1 ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2) 0 ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2);(source:Araport11) Ipc08G0014160 AT5G39110.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc08G0014150 AT2G34770.1 fatty acid hydroxylase 1 encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death. fatty acid hydroxylase 1;(source:Araport11) Ipc08G0014140 AT2G34770.1 fatty acid hydroxylase 1 encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death. fatty acid hydroxylase 1;(source:Araport11) Ipc08G0014130 AT1G30650.1 WRKY DNA-binding protein 14 member of WRKY Transcription Factor; Group II-e WRKY DNA-binding protein 14;(source:Araport11) Ipc08G0014120 AT5G44560.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc08G0014110 AT5G44400.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc08G0014100 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc08G0014090 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc08G0014080 AT2G43410.5 0 FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing. RNA binding protein;(source:Araport11) Ipc08G0014070 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc08G0014060 AT1G30760.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. The mRNA is cell-to-cell mobile. FAD-binding Berberine family protein;(source:Araport11) Ipc08G0014050 AT5G44400.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc08G0014040 AT4G20380.7 LSD1 zinc finger family protein LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge LSD1 zinc finger family protein;(source:Araport11) Ipc08G0014030 AT4G27380.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0014020 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc08G0014010 AT1G07090.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc08G0014000 AT2G41710.1 Integrase-type DNA-binding superfamily protein 0 Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0013990 AT3G19820.3 cell elongation protein / DWARF1 / DIMINUTO (DIM) Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein. cell elongation protein / DWARF1 / DIMINUTO (DIM);(source:Araport11) Ipc08G0013980 AT1G31330.1 photosystem I subunit F Encodes subunit F of photosystem I. photosystem I subunit F;(source:Araport11) Ipc08G0013970 AT1G31320.1 LOB domain-containing protein 4 0 LOB domain-containing protein 4;(source:Araport11) Ipc08G0013960 AT5G45170.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc08G0013950 AT1G80290.1 Nucleotide-diphospho-sugar transferases superfamily protein a member of the Glycosyltransferase Family 64 (according to CAZy Database) Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc08G0013940 AT4G19640.1 Ras-related small GTP-binding family protein Encodes Ara7. Ras-related small GTP-binding family protein;(source:Araport11) Ipc08G0013930 AT3G06880.5 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0013920 AT1G31280.1 Argonaute family protein Encodes Argonaute gene that binds viral siRNAs and is involved in antiviral defense response. Regulates innate immunity.Mutants have increased susceptibility to Potato virus X and tobacco rattle virus. Argonaute family protein;(source:Araport11) Ipc08G0013910 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc08G0013900 AT2G21730.1 cinnamyl alcohol dehydrogenase homolog 2 0 cinnamyl alcohol dehydrogenase homolog 2;(source:Araport11) Ipc08G0013890 AT4G19670.7 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0013880 AT1G31260.1 zinc transporter 10 precursor member of Fe(II) transporter isolog family zinc transporter 10 precursor;(source:Araport11) Ipc08G0013870 #N/A #N/A #N/A #N/A Ipc08G0013860 AT4G19700.1 SBP (S-ribonuclease binding protein) family protein Encodes BOI (Botrytis Susceptible 1 Interactor). Has E3 ubiquitin ligase activity. Interacts with and ubiquitinates BOS1 (Botrytis Susceptible 1). It prevents caspase activation and attenuates cell death. SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc08G0013850 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc08G0013840 AT5G22480.1 ZPR1 zinc-finger domain protein 0 ZPR1 zinc-finger domain protein;(source:Araport11) Ipc08G0013830 AT2G01590.1 chlororespiratory reduction 3 Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity. chlororespiratory reduction 3;(source:Araport11) Ipc08G0013820 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc08G0013810 AT2G39440.2 0 0 ribonuclease H2 subunit C-like protein;(source:Araport11) Ipc08G0013800 AT5G52210.2 GTP-binding protein 1 A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. GTP-binding protein 1;(source:Araport11) Ipc08G0013790 AT1G31190.1 myo-inositol monophosphatase like 1 Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1). myo-inositol monophosphatase like 1;(source:Araport11) Ipc08G0013780 AT5G45040.1 Cytochrome c Encodes a Class I cytochrome c family member possessing a high structural homology with photosynthetic cytochrome c(6) from cyanobacteria, but structurally and functionally distinct through the presence of a disulfide bond. Cytochrome c;(source:Araport11) Ipc08G0013770 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0013760 AT3G18670.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0013750 AT4G19950.1 0 0 polyadenylate-binding protein 1-B-binding protein;(source:Araport11) Ipc08G0013740 AT2G35060.4 0 potassium transporter K+ uptake permease 11;(source:Araport11) Ipc08G0013730 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc08G0013720 AT2G35040.1 AICARFT/IMPCHase bienzyme family protein 0 AICARFT/IMPCHase bienzyme family protein;(source:Araport11) Ipc08G0013710 AT1G70190.2 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like 0 ribosomal protein L7/L12 domain-containing protein;(source:Araport11) Ipc08G0013700 AT2G35020.1 N-acetylglucosamine-1-phosphate uridylyltransferase 2 Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates. This enzyme can also act on glucose-1-phosphate to produce UDP-glucose. The mRNA is cell-to-cell mobile. N-acetylglucosamine-1-phosphate uridylyltransferase 2;(source:Araport11) Ipc08G0013690 AT1G31040.1 PLATZ transcription factor family protein ORE15 is a nuclear localized member of the PLATZ family of transcription factors. Based on over expression and loss of function phenotypes, ORE15 functions in regulation of leaf cell proliferation and senescence. PLATZ transcription factor family protein;(source:Araport11) Ipc08G0013680 AT2G35010.2 thioredoxin O1 0 thioredoxin O1;(source:Araport11) Ipc08G0013670 AT4G39720.3 0 0 VQ motif-containing protein;(source:Araport11) Ipc08G0013660 AT3G55010.2 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR) phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5);(source:Araport11) Ipc08G0013650 AT3G22160.1 VQ motif-containing protein JAV1 is a repressor of jasmonate-mediated defense responses. VQ motif-containing protein;(source:Araport11) Ipc08G0013640 AT4G20050.7 0 Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0013630 AT1G52310.1 protein kinase family protein / C-type lectin domain-containing protein 0 protein kinase family protein / C-type lectin domain-containing protein;(source:Araport11) Ipc08G0013620 AT1G30950.1 F-box family protein Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY. F-box family protein;(source:Araport11) Ipc08G0013610 AT3G21780.1 UDP-glucosyl transferase 71B6 Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates. UDP-glucosyl transferase 71B6;(source:Araport11) Ipc08G0013600 AT5G44730.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc08G0013590 AT1G68080.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0013580 AT1G30910.1 Molybdenum cofactor sulfurase family protein 0 Molybdenum cofactor sulfurase family protein;(source:Araport11) Ipc08G0013570 AT1G30910.1 Molybdenum cofactor sulfurase family protein 0 Molybdenum cofactor sulfurase family protein;(source:Araport11) Ipc08G0013560 AT3G57430.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0013550 AT5G40190.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library. RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11) Ipc08G0013540 AT1G30880.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0013530 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0013520 AT5G60730.1 Anion-transporting ATPase One of 3 GET paralogs in Arabidopsis. GET3c is a mitochondrion localized protein with no obvious role in Tail Anchored (TA) protein insertion. Anion-transporting ATPase;(source:Araport11) Ipc08G0013510 AT3G12720.1 myb domain protein 67 Member of the R2R3 factor gene family. myb domain protein 67;(source:Araport11) Ipc08G0013500 AT1G30870.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc08G0013490 AT4G20160.3 0 0 golgin family A protein;(source:Araport11) Ipc08G0013480 AT4G20170.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc08G0013470 AT4G20260.6 plasma-membrane associated cation-binding protein 1 Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels. The mRNA is cell-to-cell mobile. plasma-membrane associated cation-binding protein 1;(source:Araport11) Ipc08G0013460 AT4G20270.1 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0013450 AT1G30820.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) Ipc08G0013440 AT1G03475.1 Coproporphyrinogen III oxidase Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection. Coproporphyrinogen III oxidase;(source:Araport11) Ipc08G0013430 AT4G10380.1 NOD26-like intrinsic protein 5;1 Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells. NOD26-like intrinsic protein 5;(source:Araport11) Ipc08G0013420 AT1G33170.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc08G0013410 AT1G10390.3 0 DRA2 is a homolog of mammalian nucleoporin 98 and a likely component of the nuclear pore complex in Arabidopsis. It positively participates in the control of the hypocotyl elongation response to plant proximity and control of shade induced gene expression. Nucleoporin autopeptidase;(source:Araport11) Ipc08G0013400 AT1G01030.2 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc08G0013390 AT4G03740.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0013380 AT4G35580.1 NAC transcription factor-like 9 Encodes a calmodulin-binding NAC protein (CBNAC). Contains calmodulin-binding domain in the C-terminus of the protein. Functions as a calmodulin-regulated transcriptional repressor. NAC transcription factor-like 9;(source:Araport11) Ipc08G0013370 AT3G32920.5 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0013360 AT1G10390.3 0 DRA2 is a homolog of mammalian nucleoporin 98 and a likely component of the nuclear pore complex in Arabidopsis. It positively participates in the control of the hypocotyl elongation response to plant proximity and control of shade induced gene expression. Nucleoporin autopeptidase;(source:Araport11) Ipc08G0013350 AT1G61570.1 translocase of the inner mitochondrial membrane 13 Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space. translocase of the inner mitochondrial membrane 13;(source:Araport11) Ipc08G0013340 AT1G01050.2 0 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. pyrophosphorylase 1;(source:Araport11) Ipc08G0013330 AT2G46800.5 0 Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis. zinc transporter;(source:Araport11) Ipc08G0013320 AT1G32990.1 plastid ribosomal protein l11 mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11 The mRNA is cell-to-cell mobile. plastid ribosomal protein l11;(source:Araport11) Ipc08G0013310 AT1G63840.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0013300 AT1G55300.1 TBP-associated factor 7 0 TBP-associated factor 7;(source:Araport11) Ipc08G0013290 AT1G32930.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc08G0013280 AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein membrane related protein CP5 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc08G0013270 AT1G61130.1 serine carboxypeptidase-like 32 0 serine carboxypeptidase-like 32;(source:Araport11) Ipc08G0013260 AT1G32860.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc08G0013250 AT1G32810.2 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc08G0013240 AT1G32790.1 CTC-interacting domain 11 RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins. CTC-interacting domain 11;(source:Araport11) Ipc08G0013230 AT1G32780.1 GroES-like zinc-binding dehydrogenase family protein 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc08G0013220 AT1G64700.1 0 0 DUF4228 domain protein;(source:Araport11) Ipc08G0013210 AT2G46770.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein NAC transcription factor NST1. NST1 and NST2 are redundant in regulating secondary wall thickening in anther walls and siliques. An NST1 promoter fusion was detected in various tissues in which lignified secondary walls develop. Both MYC2 and MYC4 bind to the NST1 promoter and appear to regulate its expression in response to blue light. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc08G0013200 AT4G24150.3 0 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower. growth-regulating factor 8;(source:Araport11) Ipc08G0013190 AT4G02290.1 glycosyl hydrolase 9B13 0 glycosyl hydrolase 9B13;(source:Araport11) Ipc08G0013180 AT5G53650.1 0 0 ABC transporter A family protein;(source:Araport11) Ipc08G0013170 AT5G41890.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0013160 AT1G64670.1 alpha/beta-Hydrolases superfamily protein Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0013150 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc08G0013140 AT4G24110.1 0 0 NADP-specific glutamate dehydrogenase;(source:Araport11) Ipc08G0013130 AT4G27680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0013120 AT4G24090.1 0 0 homer protein;(source:Araport11) Ipc08G0013110 AT1G64640.1 early nodulin-like protein 8 0 early nodulin-like protein 8;(source:Araport11) Ipc08G0013100 AT4G10770.1 oligopeptide transporter 7 oligopeptide transporter oligopeptide transporter 7;(source:Araport11) Ipc08G0013090 AT3G61400.2 0 1-aminocyclopropane-1-carboxylate oxidase-like protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0013080 AT4G27745.4 0 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc08G0013070 AT5G41990.1 with no lysine (K) kinase 8 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. with no lysine (K) kinase 8;(source:Araport11) Ipc08G0013060 AT5G63830.1 HIT-type Zinc finger family protein 0 HIT-type Zinc finger family protein;(source:Araport11) Ipc08G0013050 AT4G00910.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc08G0013040 AT2G27230.2 transcription factor-related Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. transcription factor-like protein;(source:Araport11) Ipc08G0013030 AT5G53500.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0013020 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0013010 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc08G0013000 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc08G0012990 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc08G0012980 AT4G24050.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0012970 AT1G55090.1 carbon-nitrogen hydrolase family protein 0 carbon-nitrogen hydrolase family protein;(source:Araport11) Ipc08G0012960 AT3G23920.1 beta-amylase 1 Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.Activity of BAM1 increases 4 days after osmotic stress. BAM1 has a higher temperature optimum than BAM3 (PMID:25293962). beta-amylase 1;(source:Araport11) Ipc08G0012950 AT4G10840.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0012940 AT1G29320.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0012930 AT4G24020.1 NIN like protein 7 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor. The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc08G0012920 AT2G39770.3 0 Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc08G0012910 AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein TCF1 encodes a member of the RCC1 gene family and is required for chromatin based gene regulation of cold responsive genes in a CBF-independent manner. It is expressed in response to cold but not ABA. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc08G0012900 AT5G24310.3 0 One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules. ABL interactor-like protein 3;(source:Araport11) Ipc08G0012890 AT1G64520.1 regulatory particle non-ATPase 12A 0 regulatory particle non-ATPase 12A;(source:Araport11) Ipc08G0012880 AT1G64510.2 0 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc08G0012870 AT4G23980.2 auxin response factor 9 Encodes auxin response factor 9 (ARF9). The mRNA is cell-to-cell mobile. auxin response factor 9;(source:Araport11) Ipc08G0012860 AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development. 3-ketoacyl-acyl carrier protein synthase I;(source:Araport11) Ipc08G0012850 AT3G16890.2 0 Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase). pentatricopeptide (PPR) domain protein 40;(source:Araport11) Ipc08G0012840 AT5G42050.1 DCD (Development and Cell Death) domain protein Stress responsive asparagine-rich protein. Binds to PevD (Verticillium dahliae ) fungal effector protein. NRP interacts with CRY2, leading to increased cytoplasmic accumulation of CRY2 in a blue light-independent manner (PMID:28633330).NRP also binds FyPP3 and recruits it to endosomes and thus targets it for degradation. DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc08G0012830 AT5G42070.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0012820 AT1G64480.3 0 calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs calcineurin B-like protein 8;(source:Araport11) Ipc08G0012810 AT4G10955.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0012800 AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 Encodes a protein with UDP-D-glucose 4-epimerase activity. UDP-D-glucose/UDP-D-galactose 4-epimerase 5;(source:Araport11) Ipc08G0012790 AT1G64430.2 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0012780 AT4G23900.1 Nucleoside diphosphate kinase family protein 0 Nucleoside diphosphate kinase family protein;(source:Araport11) Ipc08G0012770 AT1G74480.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc08G0012760 AT5G53440.2 0 0 LOW protein: zinc finger CCCH domain protein;(source:Araport11) Ipc08G0012750 AT5G13680.1 IKI3 family protein A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1–ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Mutants have no ncm5U (5-carbamoylmethyluridine). IKI3 family protein;(source:Araport11) Ipc08G0012740 AT4G23880.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0012730 AT1G64405.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0012720 AT4G23860.3 PHD finger protein-related 0 PHD finger protein-like protein;(source:Araport11) Ipc08G0012710 AT4G23850.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc08G0012700 AT1G64390.1 glycosyl hydrolase 9C2 0 glycosyl hydrolase 9C2;(source:Araport11) Ipc08G0012690 AT4G27730.1 oligopeptide transporter 1 oligopeptide transporter oligopeptide transporter 1;(source:Araport11) Ipc08G0012680 AT2G07599.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0012670 AT1G64380.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0012660 AT3G20730.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 PPR superfamily protein;(source:Araport11) Ipc08G0012650 AT1G64260.2 0 0 MuDR family transposase;(source:Araport11) Ipc08G0012640 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0012630 AT5G41850.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0012620 AT4G23810.1 WRKY family transcription factor member of WRKY Transcription Factor; Group III WRKY family transcription factor;(source:Araport11) Ipc08G0012610 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc08G0012600 AT4G11080.1 HMG (high mobility group) box protein Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes. HMG (high mobility group) box protein;(source:Araport11) Ipc08G0012590 AT5G53220.7 0 0 hypothetical protein;(source:Araport11) Ipc08G0012580 AT4G01100.1 adenine nucleotide transporter 1 Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration. adenine nucleotide transporter 1;(source:Araport11) Ipc08G0012570 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0012560 AT3G48520.1 cytochrome P450, family 94, subfamily B, polypeptide 3 CYP94B3 is a jasmonoyl-isoleucine-12-hydroxylase that catalyzes the formation of 12-OH-JA-Ile from JA-Ile. By reducing the levels of this the biologically active phytohormone, CYP94B3 attenuates the jasmonic acid signaling cascade. CYP94B3 transcript levels rise in response to wounding. cytochrome P450, family 94, subfamily B, polypeptide 3;(source:Araport11) Ipc08G0012550 AT3G61660.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0012540 AT3G61670.1 Protein of unknown function (DUF3133) 0 extra-large G-like protein, putative (DUF3133);(source:Araport11) Ipc08G0012530 AT4G11090.1 TRICHOME BIREFRINGENCE-LIKE 23 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 23;(source:Araport11) Ipc08G0012520 AT5G53220.7 0 0 hypothetical protein;(source:Araport11) Ipc08G0012510 AT1G64300.2 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc08G0012500 AT2G46330.1 arabinogalactan protein 16 Encodes arabinogalactan protein (AGP16). arabinogalactan protein 16;(source:Araport11) Ipc08G0012490 AT4G23750.2 cytokinin response factor 2 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 2;(source:Araport11) Ipc08G0012480 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc08G0012470 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0012460 AT5G53340.1 Galactosyltransferase family protein Encodes a hydroxyproline O-galactosyltransferase. Galactosyltransferase family protein;(source:Araport11) Ipc08G0012450 AT3G59140.1 multidrug resistance-associated protein 14 member of MRP subfamily multidrug resistance-associated protein 14;(source:Araport11) Ipc08G0012440 AT4G23720.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc08G0012430 AT5G41620.1 0 0 intracellular protein transporter USO1-like protein;(source:Araport11) Ipc08G0012420 AT5G41610.3 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 18;(source:Araport11) Ipc08G0012410 AT5G09950.2 0 Encodes a DYW-class PPR protein required for RNA editing at four sites in mitochondria of A. thaliana. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0012400 AT1G74600.1 pentatricopeptide (PPR) repeat-containing protein OTP87 appears to act as a trans-factor involved in the recognition of the two editing sites in mitochondrial genes nad7-C24 and atp1-C1178. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc08G0012390 AT1G64160.1 Disease resistance-responsive (dirigent-like protein) family protein Encodes a dirigent protein involved in the synthesis of (-)pinoresinol. Dirigent proteins impart stereoselectivity on the phenoxy radical coupling reaction yielding optically active lignans from two molecules of coniferyl alcohol. Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc08G0012380 AT1G64150.1 Uncharacterized protein family (UPF0016) PAM71 encodes an integral thylakoid membrane protein that is required for normal operation of oxygen-evolving complex (as evidenced by oxygen evolution rates) and for manganese incorporation. PAM71 belongs to a small gene family in Arabidopsis comprising five members. PAM71 is well conserved in the green lineage and shares homology with putative Ca2+/H+ exchangers from yeast (Saccharomyces cerevisiae) (GDT1) and human (Homo sapiens) (TMEM165). Uncharacterized protein family (UPF0016);(source:Araport11) Ipc08G0012370 AT1G64140.1 0 0 WRKY transcription factor;(source:Araport11) Ipc08G0012360 AT3G18440.1 aluminum-activated malate transporter 9 Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves. The mRNA is cell-to-cell mobile. aluminum-activated malate transporter 9;(source:Araport11) Ipc08G0012350 #N/A #N/A #N/A #N/A Ipc08G0012340 AT1G64080.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc08G0012330 AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc08G0012320 AT1G07960.4 0 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. PDI-like 5-1;(source:Araport11) Ipc08G0012310 AT5G41580.1 RING/U-box superfamily protein Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response. RING/U-box superfamily protein;(source:Araport11) Ipc08G0012300 AT5G16780.3 0 Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. SART-1 family;(source:Araport11) Ipc08G0012290 AT1G64000.1 WRKY DNA-binding protein 56 member of WRKY Transcription Factor; Group II-c WRKY DNA-binding protein 56;(source:Araport11) Ipc08G0012280 AT4G23550.1 WRKY family transcription factor Encodes WRKY DNA-binding protein 29 (WRKY29). The mRNA is cell-to-cell mobile. WRKY family transcription factor;(source:Araport11) Ipc08G0012270 AT1G63940.2 monodehydroascorbate reductase 6 0 monodehydroascorbate reductase 6;(source:Araport11) Ipc08G0012260 AT1G63930.1 from the Czech 'roh' meaning 'corner' 0 from the Czech roh meaning corner;(source:Araport11) Ipc08G0012250 AT1G63910.1 myb domain protein 103 member of MYB3R- and R2R3- type MYB- encoding genes myb domain protein 103;(source:Araport11) Ipc08G0012240 AT5G52640.1 heat shock protein 90.1 Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. The mRNA is cell-to-cell mobile. heat shock-like protein;(source:Araport11) Ipc08G0012230 AT4G01370.1 MAP kinase 4 Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. The mRNA is cell-to-cell mobile. MAP kinase 4;(source:Araport11) Ipc08G0012220 AT4G23490.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc08G0012210 AT4G19690.2 iron-regulated transporter 1 The gene encodes Fe2+ transporter protein. It is a member of the Zrt/Irt-like protein (ZIP) family of transporters. AtIRT1 has broad specificity for divalent heavy metals, mediating the transport of zinc, manganese, cobalt and cadmium under Fe-deficient conditions. IRT1 is monoubiquitinated to promote endocytic trafficking. The mRNA is cell-to-cell mobile. iron-regulated transporter 1;(source:Araport11) Ipc08G0012200 AT5G41410.1 POX (plant homeobox) family protein Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity. POX (plant homeobox) family protein;(source:Araport11) Ipc08G0012190 AT3G05170.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc08G0012180 AT1G63850.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc08G0012170 AT3G61460.1 brassinosteroid-responsive RING-H2 Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. brassinosteroid-responsive RING-H2;(source:Araport11) Ipc08G0012160 AT1G63830.3 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc08G0012150 AT5G41380.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc08G0012140 AT5G41370.1 homolog of xeroderma pigmentosum complementation group B 1 Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies. The mRNA is cell-to-cell mobile. DNA repair helicase XPB1-like protein;(source:Araport11) Ipc08G0012130 AT1G19330.3 0 Evening-expressed key component of Sin3-HDAC complex, which bind directly to the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) and PSEUDO-RESPONSE REGULATOR 9 (PRR9) promoters and catalyze histone 3 (H3) deacetylation at the cognate regions to repress expression, allowing the declining phase of their expression at dusk. histone deacetylase complex subunit;(source:Araport11) Ipc08G0012120 AT1G15390.1 peptide deformylase 1A encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis. peptide deformylase 1A;(source:Araport11) Ipc08G0012110 AT1G80160.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc08G0012100 AT3G15710.1 Peptidase S24/S26A/S26B/S26C family protein 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc08G0012090 AT1G52590.1 Putative thiol-disulphide oxidoreductase DCC 0 Putative thiol-disulfide oxidoreductase DCC;(source:Araport11) Ipc08G0012080 AT5G62200.1 Embryo-specific protein 3, (ATS3) 0 Embryo-specific protein 3, (ATS3);(source:Araport11) Ipc08G0012070 AT3G15730.1 phospholipase D alpha 1 Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. The mRNA is cell-to-cell mobile. phospholipase D alpha 1;(source:Araport11) Ipc08G0012060 AT1G52565.1 0 0 cytochrome P450 family protein;(source:Araport11) Ipc08G0012050 AT1G52560.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc08G0012040 AT1G15340.1 methyl-CPG-binding domain 10 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 10;(source:Araport11) Ipc08G0012030 AT3G15800.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc08G0012020 AT5G20230.1 blue-copper-binding protein Encodes a Al-stress-induced gene. Along with TCF, it promotes lignin biosynthesis in response to cold stress. The mRNA is cell-to-cell mobile. blue-copper-binding protein;(source:Araport11) Ipc08G0012010 AT3G15810.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc08G0012000 AT2G44750.2 thiamin pyrophosphokinase 2 Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase 2;(source:Araport11) Ipc08G0011990 AT3G15820.1 phosphatidic acid phosphatase-related / PAP2-related Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway phosphatidic acid phosphatase-related / PAP2-like protein;(source:Araport11) Ipc08G0011980 AT3G15880.2 WUS-interacting protein 2 0 WUS-interacting protein 2;(source:Araport11) Ipc08G0011970 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc08G0011960 AT1G52540.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0011950 AT1G80070.1 Pre-mRNA-processing-splicing factor Encodes a factor that influences pre-mRNA splicing and is required for embryonic development. Mutations result in an abnormal suspensor and embryo lethality. The mRNA is cell-to-cell mobile. Pre-mRNA-processing-splicing factor;(source:Araport11) Ipc08G0011940 AT1G80060.5 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc08G0011930 AT2G25350.4 0 0 Phox (PX) domain-containing protein;(source:Araport11) Ipc08G0011920 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0011910 AT1G52520.1 FAR1-related sequence 6 0 FAR1-related sequence 6;(source:Araport11) Ipc08G0011900 AT4G17245.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0011890 AT1G69310.4 0 Encodes WRKY57, a member of the WRKY Transcription Factor. Activation of WRKY57 confers drought tolerance. WRKY DNA-binding protein 57;(source:Araport11) Ipc08G0011880 AT1G80010.1 FAR1-related sequence 8 0 FAR1-related sequence 8;(source:Araport11) Ipc08G0011870 AT1G52500.2 MUTM homolog-1 Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro. MUTM homolog-1;(source:Araport11) Ipc08G0011860 AT1G15290.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes REDUCED CHLOROPLAST COVERAGE 3 (REC3). Contributes to establishing the size of the chloroplast compartment. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0011850 AT1G80450.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc08G0011840 AT3G18430.3 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc08G0011830 #N/A #N/A #N/A #N/A Ipc08G0011820 AT1G80480.1 plastid transcriptionally active 17 0 plastid transcriptionally active 17;(source:Araport11) Ipc08G0011810 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc08G0011800 AT2G26000.3 0 Encodes a RING domain containing protein BRIZ2. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc08G0011790 AT1G15810.1 S15/NS1, RNA-binding protein 0 S15/NS1, RNA-binding protein;(source:Araport11) Ipc08G0011780 AT1G80630.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc08G0011770 #N/A #N/A #N/A #N/A Ipc08G0011760 AT2G07560.1 H(+)-ATPase 6 0 H[+]-ATPase 6;(source:Araport11) Ipc08G0011750 AT5G25190.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0011740 AT1G15860.2 Domain of unknown function (DUF298) 0 defective in cullin neddylation protein (DUF298);(source:Araport11) Ipc08G0011730 AT1G80980.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc08G0011720 AT1G15870.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc08G0011710 AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Deadenylase. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0011700 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0011690 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc08G0011680 AT2G32060.3 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc08G0011670 AT3G23600.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0011660 AT4G31880.2 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. transcriptional regulator;(source:Araport11) Ipc08G0011650 AT4G31880.2 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. transcriptional regulator;(source:Araport11) Ipc08G0011640 AT1G80810.5 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc08G0011630 AT2G32600.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0011620 AT2G41473.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0011610 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0011600 AT1G80810.3 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc08G0011590 AT1G15950.3 0 Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.The mRNA is cell-to-cell mobile. cinnamoyl coa reductase 1;(source:Araport11) Ipc08G0011580 AT5G10930.1 CBL-interacting protein kinase 5 Encodes CBL-interacting protein kinase 5 (CIPK5). CBL-interacting protein kinase 5;(source:Araport11) Ipc08G0011570 AT1G78990.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0011560 AT5G57970.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc08G0011550 AT4G37580.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein involved in apical hook development. putative N-acetyltransferase Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc08G0011540 AT1G19780.1 cyclic nucleotide gated channel 8 Encodes a member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility. cyclic nucleotide gated channel 8;(source:Araport11) Ipc08G0011530 AT1G80870.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0011520 AT5G15350.1 early nodulin-like protein 17 0 early nodulin-like protein 17;(source:Araport11) Ipc08G0011510 AT1G80880.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0011500 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc08G0011490 AT5G57820.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc08G0011480 AT5G48545.2 0 Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro. histidine triad nucleotide-binding 3;(source:Araport11) Ipc08G0011470 AT1G16830.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0011460 #N/A #N/A #N/A #N/A Ipc08G0011450 AT1G80940.1 0 0 Snf1 kinase interactor-like protein;(source:Araport11) Ipc08G0011440 AT1G79710.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0011430 AT1G27450.1 adenine phosphoribosyl transferase 1 Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP. adenine phosphoribosyl transferase 1;(source:Araport11) Ipc08G0011420 AT1G16070.1 tubby like protein 8 Member of TLP family tubby like protein 8;(source:Araport11) Ipc08G0011410 AT1G16080.1 0 0 nuclear protein;(source:Araport11) Ipc08G0011400 AT1G16180.2 Serinc-domain containing serine and sphingolipid biosynthesis protein 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc08G0011390 AT5G57800.1 Fatty acid hydroxylase superfamily encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. The mRNA is cell-to-cell mobile. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc08G0011380 AT1G67940.1 non-intrinsic ABC protein 3 member of NAP subfamily The mRNA is cell-to-cell mobile. non-intrinsic ABC protein 3;(source:Araport11) Ipc08G0011370 AT2G24530.2 0 0 transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11) Ipc08G0011360 AT5G43150.1 0 0 elongation factor;(source:Araport11) Ipc08G0011350 AT3G14250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0011340 AT2G20830.2 transferases;folic acid binding 0 folic acid binding / transferase;(source:Araport11) Ipc08G0011330 AT4G01870.1 tolB protein-related 0 tolB protein-like protein;(source:Araport11) Ipc08G0011320 AT1G73120.1 0 0 F-box/RNI superfamily protein;(source:Araport11) Ipc08G0011310 AT1G16880.1 uridylyltransferase-related Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. The mRNA is cell-to-cell mobile. uridylyltransferase-like protein;(source:Araport11) Ipc08G0011300 AT1G10865.1 0 0 cytochrome C oxidase assembly factor;(source:Araport11) Ipc08G0011290 AT4G00650.1 FRIGIDA-like protein Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI. FRIGIDA-like protein;(source:Araport11) Ipc08G0011280 AT5G61790.1 calnexin 1 0 calnexin 1;(source:Araport11) Ipc08G0011270 AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0011260 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc08G0011250 AT5G03980.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc08G0011240 #N/A #N/A #N/A #N/A Ipc08G0011230 AT5G07330.1 0 0 NFU1 iron-sulfur cluster protein;(source:Araport11) Ipc08G0011220 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0011210 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0011200 AT4G12300.1 cytochrome P450, family 706, subfamily A, polypeptide 4 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 4;(source:Araport11) Ipc08G0011190 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0011180 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc08G0011170 AT3G55260.1 beta-hexosaminidase 1 Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products. beta-hexosaminidase 1;(source:Araport11) Ipc08G0011160 AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0011150 AT5G51040.1 0 Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.Sdhaf2 knockdown line showed lowered SDH1 protein abundance, lowered maximal SDH activity and less protein-bound FAD at the molecular mass of SDH1. succinate dehydrogenase assembly factor;(source:Araport11) Ipc08G0011140 AT3G23760.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc08G0011130 AT5G61840.1 Exostosin family protein Encodes a UDP-Xyl:beta-(1,4)-xylosyl transferase. Exostosin family protein;(source:Araport11) Ipc08G0011120 AT5G61850.1 floral meristem identity control protein LEAFY (LFY) Encodes transcriptional regulator that promotes the transition to flowering.Involved in floral meristem development. LFY is involved in the regulation of AP3 expression, and appears to bring the F-box protein UFO to the AP3 promoter. Amino acids 46-120 define a protein domain that mediates self-interaction. floral meristem identity control protein LEAFY (LFY);(source:Araport11) Ipc08G0011110 AT1G29880.1 glycyl-tRNA synthetase / glycine--tRNA ligase 0 glycyl-tRNA synthetase / glycine-tRNA ligase;(source:Araport11) Ipc08G0011100 AT3G56360.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0011090 AT5G61865.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0011080 AT5G61890.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0011070 AT5G61900.3 Calcium-dependent phospholipid-binding Copine family protein Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response. Calcium-dependent phospholipid-binding Copine family protein;(source:Araport11) Ipc08G0011060 AT2G37670.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0011050 AT5G61910.2 DCD (Development and Cell Death) domain protein 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc08G0011040 AT5G50970.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0011030 AT2G33550.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc08G0011020 AT4G25080.6 0 Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope. magnesium-protoporphyrin IX methyltransferase;(source:Araport11) Ipc08G0011010 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0011000 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0010990 AT5G61970.1 signal recognition particle-related / SRP-related 0 signal recognition particle-related / SRP-like protein;(source:Araport11) Ipc08G0010980 AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0010970 AT3G48290.1 cytochrome P450, family 71, subfamily A, polypeptide 24 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 24;(source:Araport11) Ipc08G0010960 AT5G62000.5 0 Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.Phosphorylation of ARF2 relieves repression of transcription of HAK5 and thereby promotes potassium uptake. The mRNA is cell-to-cell mobile. auxin response factor 2;(source:Araport11) Ipc08G0010950 AT3G26744.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. It also binds to and inhibits the expression of ABI3. Mutants are defective in cold-regulated gene expression and ABA signaling druing seed germination.. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. Together with ZOU, ICE1 determines primary seed dormancy depth independently of their joint role in endosperm development.ICE1 interacts with ABI5. Also members of the DELLA family, which repress ICE1 function. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0010940 AT5G23720.1 dual specificity protein phosphatase family protein Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling. dual specificity protein phosphatase family protein;(source:Araport11) Ipc08G0010930 AT1G18300.1 nudix hydrolase homolog 4 0 nudix hydrolase homolog 4;(source:Araport11) Ipc08G0010920 AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein 0 Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11) Ipc08G0010910 AT1G48480.1 receptor-like kinase 1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene receptor-like kinase 1;(source:Araport11) Ipc08G0010900 AT3G42880.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0010890 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc08G0010880 AT3G17860.1 jasmonate-zim-domain protein 3 JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine. jasmonate-zim-domain protein 3;(source:Araport11) Ipc08G0010870 AT3G55090.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc08G0010860 AT3G17910.1 Surfeit locus 1 cytochrome c oxidase biogenesis protein Surfeit 1 (SURF1) mRNA. Similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly. Surfeit locus 1 cytochrome c oxidase biogenesis protein;(source:Araport11) Ipc08G0010850 AT3G17950.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0010840 AT4G32910.1 0 SBB1 is a putative nucleoporin that is localized to the nuclear envelope. SBB1 was identified in a screen for supressors of BAK1, BKK1 mediated cell death. nuclear pore complex Nup85-like protein;(source:Araport11) Ipc08G0010830 AT1G18270.1 ketose-bisphosphate aldolase class-II family protein 0 ketose-bisphosphate aldolase class-II family protein;(source:Araport11) Ipc08G0010820 AT3G17940.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc08G0010810 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc08G0010800 AT2G29525.5 0 Inositol phosphorylceramide synthase Inositol phosphorylceramide synthase 3;(source:Araport11) Ipc08G0010790 AT1G18260.1 HCP-like superfamily protein Encodes an Arabidopsis homolog of the yeast Hrd3/mammlian Sel1L protein. Involved in ERAD (Endoplasmic reticulum-associated degradation). HCP-like superfamily protein;(source:Araport11) Ipc08G0010780 AT2G05210.3 Nucleic acid-binding, OB-fold-like protein Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0010770 AT1G48590.4 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc08G0010760 AT3G18000.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a N-methyltransferase-like protein. Double mutants of NMT1 and NMT3 are defective in leaf, root, flower, seed, and pollen development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc08G0010750 AT1G18190.1 golgin candidate 2 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508–668 aa) portion of the protein. golgin Putative 2;(source:Araport11) Ipc08G0010740 AT3G18035.1 winged-helix DNA-binding transcription factor family protein A linker histone like protein winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc08G0010730 AT1G09700.2 0 Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin. dsRNA-binding domain-like superfamily protein;(source:Araport11) Ipc08G0010720 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0010710 AT1G18100.1 PEBP (phosphatidylethanolamine-binding protein) family protein Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc08G0004520 AT5G63440.2 Protein of unknown function (DUF167) Encodes a single copy protein in Arabidopsis containing a DUF167 domain that is conserved in eukaryotes. Genetically CSU suppresses mutations in COP1. In vitro, it interacts with CACTIN and in vivo with CCA1. CSU4 promotes photomorphogenesis via negative regulation of CCA1 and PIF4 expression. hypothetical protein (DUF167);(source:Araport11) Ipc08G0004530 AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc08G0004540 AT4G21410.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 29;(source:Araport11) Ipc08G0004550 AT3G04970.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc08G0004560 AT5G64840.1 general control non-repressible 5 member of GCN subfamily general control non-repressible 5;(source:Araport11) Ipc08G0004570 #N/A #N/A #N/A #N/A Ipc08G0004580 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc08G0004590 AT1G30470.1 SIT4 phosphatase-associated family protein 0 SIT4 phosphatase-associated family protein;(source:Araport11) Ipc08G0004600 AT3G59350.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0004610 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc08G0004620 AT1G23800.1 aldehyde dehydrogenase 2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. aldehyde dehydrogenase 2B7;(source:Araport11) Ipc08G0004630 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0004640 #N/A #N/A #N/A #N/A Ipc08G0004650 #N/A #N/A #N/A #N/A Ipc08G0004660 #N/A #N/A #N/A #N/A Ipc08G0004670 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0004680 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0004690 AT2G26450.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc08G0004700 AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc08G0004710 AT3G58750.1 citrate synthase 2 Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. citrate synthase 2;(source:Araport11) Ipc08G0004720 AT2G41490.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase UDP-glcnac-adolichol phosphate glcnac-1-p-transferase;(source:Araport11) Ipc08G0004730 AT4G27970.4 0 Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane. SLAC1 homologue 2;(source:Araport11) Ipc08G0004740 AT5G45640.1 Subtilisin-like serine endopeptidase family protein 0 Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc08G0004750 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc08G0004760 AT4G21160.4 Calcium-dependent ARF-type GTPase activating protein family ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11) Ipc08G0004770 AT1G30510.1 root FNR 2 Encodes a root-type ferredoxin:NADP(H) oxidoreductase. root FNR 2;(source:Araport11) Ipc08G0004780 AT5G44510.1 target of AVRB operation1 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc08G0004790 AT5G13600.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0004800 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0004810 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc08G0004820 AT5G03110.1 0 0 protamine P1 family protein;(source:Araport11) Ipc08G0004830 AT1G30500.2 nuclear factor Y, subunit A7 0 nuclear factor Y, subunit A7;(source:Araport11) Ipc08G0004840 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc08G0004850 AT2G36850.1 glucan synthase-like 8 Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160). glucan synthase-like 8;(source:Araport11) Ipc08G0004860 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0004870 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc08G0004880 AT4G20840.1 FAD-binding Berberine family protein Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004890 AT1G11770.1 FAD-binding Berberine family protein Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0004910 AT4G20840.1 FAD-binding Berberine family protein Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004920 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0004930 AT5G44360.2 0 0 FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004940 AT2G34780.1 maternal effect embryo arrest 22 Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway. maternal effect embryo arrest 22;(source:Araport11) Ipc08G0004950 AT2G34770.1 fatty acid hydroxylase 1 encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death. fatty acid hydroxylase 1;(source:Araport11) Ipc08G0004960 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0004970 AT1G48740.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0004980 AT2G34770.1 fatty acid hydroxylase 1 encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death. fatty acid hydroxylase 1;(source:Araport11) Ipc08G0004990 AT4G17460.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Encodes a class II HD-ZIP protein that regulates meristematic activity in different tissues, and that it is necessary for the correct formation of the gynoecium. Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein;(source:Araport11) Ipc08G0005000 AT4G20930.1 6-phosphogluconate dehydrogenase family protein Encodes a 3-hydroxyisobutyrate dehydrogenase. 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc08G0005010 AT4G25680.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc08G0005020 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc08G0005030 AT3G24560.2 Adenine nucleotide alpha hydrolases-like superfamily protein novel gene involved in embryogenesis Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc08G0005040 AT4G20940.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma-membrane localized LRR receptor-like protein involved in both ABA and H202 mediated signaling involved in stomatal movement. TAIR10 annotation for this gene has a low confidence score (2-star). See Comments field for structural annotation by the community. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0005050 AT5G67030.1 zeaxanthin epoxidase (ZEP) (ABA1) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. zeaxanthin epoxidase (ZEP) (ABA1);(source:Araport11) Ipc08G0005060 #N/A #N/A #N/A #N/A Ipc08G0005070 AT3G51690.1 PIF1 helicase DNA helicase homolog PIF1. PIF1 helicase;(source:Araport11) Ipc08G0005080 AT1G30540.1 Actin-like ATPase superfamily protein 0 Actin-like ATPase superfamily protein;(source:Araport11) Ipc08G0005090 AT2G37930.4 0 0 hypothetical protein (DUF3527);(source:Araport11) Ipc08G0005100 AT4G20380.7 LSD1 zinc finger family protein LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge LSD1 zinc finger family protein;(source:Araport11) Ipc08G0005110 AT5G44550.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc08G0005120 AT5G49440.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005130 AT5G10780.1 0 0 ER membrane protein complex subunit-like protein;(source:Araport11) Ipc08G0005140 AT1G03540.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc08G0005150 AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc08G0005160 AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 0 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc08G0005170 AT1G07120.2 0 0 CHUP1-like protein;(source:Araport11) Ipc08G0005180 AT1G67630.1 DNA polymerase alpha 2 0 DNA polymerase alpha 2;(source:Araport11) Ipc08G0005190 AT4G20400.1 JUMONJI 14 Encodes a histone H3K4 demethylase repressing floral transition.Coordinates and structure features have been deposited in the RCSB Protein Data Bank with the accession codes 5YKN (JMJ14CD) and 5YKO(JMJ14CD-NOG-H3K4em3 complex). Glu285 and Glu516 contribute to the recognition of H3R2. Asp312 contributes to the recognition of H3Q5. Phe171 and Val363 contribute to the recognition of H3A7. Ser290, Trp296, and Tyr298 contribute to the recognition of H3K4me3 (PMID:29233856). JUMONJI 14;(source:Araport11) Ipc08G0005200 AT4G20410.1 gamma-soluble NSF attachment protein Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family. gamma-soluble NSF attachment protein;(source:Araport11) Ipc08G0005210 AT4G20430.3 0 0 Subtilase family protein;(source:Araport11) Ipc08G0005220 AT1G30620.6 0 encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0005230 AT1G30610.2 pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide repeat protein .Mutations in this locus result in embryo lethality due to defects in chloroplast development. Embryo shape at seed maturity is globular. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc08G0005240 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0005250 AT4G32910.1 0 SBB1 is a putative nucleoporin that is localized to the nuclear envelope. SBB1 was identified in a screen for supressors of BAK1, BKK1 mediated cell death. nuclear pore complex Nup85-like protein;(source:Araport11) Ipc08G0005260 AT3G32260.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc08G0005270 AT3G03080.1 Zinc-binding dehydrogenase family protein 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc08G0005280 AT5G57990.1 ubiquitin-specific protease 23 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 23;(source:Araport11) Ipc08G0005290 AT3G25690.3 Hydroxyproline-rich glycoprotein family protein actin binding protein required for normal chloroplast positioning The mRNA is cell-to-cell mobile. Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0005300 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc08G0005310 AT1G04970.3 0 Encodes one of the two LBP/BPI related proteins (AT1G04970/LBR-1, AT3G20270/LBR-2) that bind to LPS directly and regulate PR1 expression. lipid-binding serum glycoprotein family protein;(source:Araport11) Ipc08G0005320 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0005330 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc08G0005340 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc08G0005350 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005360 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0005370 #N/A #N/A #N/A #N/A Ipc08G0005380 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0005390 AT1G15400.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0005400 AT1G28690.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0005410 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0005420 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0005430 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0005440 AT5G41730.2 0 0 Protein kinase family protein;(source:Araport11) Ipc08G0005450 AT1G22860.1 Vacuolar sorting protein 39 0 Vacuolar sorting protein 39;(source:Araport11) Ipc08G0005460 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0005470 AT3G61590.4 0 F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc08G0005480 AT5G14930.2 senescence-associated gene 101 encodes an acyl hydrolase involved in senescence . senescence-associated gene 101;(source:Araport11) Ipc08G0005490 AT5G45160.1 Root hair defective 3 GTP-binding protein (RHD3) 0 Root hair defective 3 GTP-binding protein (RHD3);(source:Araport11) Ipc08G0005500 AT2G24640.1 ubiquitin-specific protease 19 0 ubiquitin-specific protease 19;(source:Araport11) Ipc08G0005510 AT1G10960.1 ferredoxin 1 0 ferredoxin 1;(source:Araport11) Ipc08G0005520 AT2G24395.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc08G0005530 AT2G35640.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc08G0005540 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc08G0005550 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0005560 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc07G0001870 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0001880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001910 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc07G0001920 AT4G16460.3 0 0 zinc finger CCCH domain protein;(source:Araport11) Ipc07G0001930 AT4G17230.2 0 Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family. SCARECROW-like 13;(source:Araport11) Ipc07G0001940 AT2G35530.1 basic region/leucine zipper transcription factor 16 Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members. basic region/leucine zipper transcription factor 16;(source:Araport11) Ipc07G0001950 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001960 AT5G03320.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0001970 AT5G19740.1 Peptidase M28 family protein LAMP is an AMP paralog that overlaps in expression within the vascular system. Along with LAMP it suppresses meristem activity within the peripheral zone of the shoot apical meristem. LAMP is localized to the endoplasmic reticulum. Peptidase M28 family protein;(source:Araport11) Ipc07G0001980 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001990 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0002000 AT3G61220.1 NAD(P)-binding Rossmann-fold superfamily protein CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0002010 AT5G59530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc07G0002020 AT2G30830.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc07G0002030 AT5G48160.2 Protein of unknown function (DUF1423) Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems. potyvirus VPg interacting protein (DUF1423);(source:Araport11) Ipc07G0002040 AT3G13980.1 0 0 SKI/DACH domain protein;(source:Araport11) Ipc07G0002050 AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc07G0002060 AT5G07650.1 Actin-binding FH2 protein 0 Actin-binding FH2 protein;(source:Araport11) Ipc07G0002070 AT2G35760.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc07G0002080 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0002090 AT4G17240.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc07G0002100 AT3G13130.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0002110 AT5G28530.3 0 0 FAR1-related sequence 10;(source:Araport11) Ipc03G0025840 AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation. chloroplastic NIFS-like cysteine desulfurase;(source:Araport11) Ipc03G0025830 #N/A #N/A #N/A #N/A Ipc03G0025820 #N/A #N/A #N/A #N/A Ipc03G0025810 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0025800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025790 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc03G0025770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025760 AT4G27620.2 0 0 intracellular protein transporter;(source:Araport11) Ipc03G0025750 AT5G09760.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc03G0025740 AT3G18660.2 plant glycogenin-like starch initiation protein 1 Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 1;(source:Araport11) Ipc03G0025730 AT5G09770.1 Ribosomal protein L17 family protein 0 Ribosomal protein L17 family protein;(source:Araport11) Ipc03G0025720 AT1G77160.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc03G0025710 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025700 AT5G53500.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0025690 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0025680 AT5G64660.1 CYS, MET, PRO, and GLY protein 2 0 CYS, MET, PRO, and GLY protein 2;(source:Araport11) Ipc03G0025670 AT5G62410.1 structural maintenance of chromosomes 2 SMC2-1 (SMC2) structural maintenance of chromosomes 2;(source:Araport11) Ipc03G0025660 AT1G15720.1 TRF-like 5 Arabidopsis thaliana myb family transcription factor (At1g15720). MYB/SANT domain containing protein. TRF-like 5;(source:Araport11) Ipc03G0025650 AT1G45233.2 THO complex, subunit 5 Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. THO complex, subunit 5;(source:Araport11) Ipc03G0025640 AT3G18730.1 tetratricopeptide repeat (TPR)-containing protein Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc03G0025630 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0025620 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0025610 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025600 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0025590 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025580 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025570 AT5G03435.1 Ca2+dependent plant phosphoribosyltransferase family protein 0 Ca2+dependent plant phosphoribosyltransferase family protein;(source:Araport11) Ipc03G0025560 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0025550 AT1G04990.6 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc03G0025540 AT3G04600.3 Nucleotidylyl transferase superfamily protein 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc03G0025530 #N/A #N/A #N/A #N/A Ipc03G0025520 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0025510 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0025500 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc03G0020760 AT4G35780.1 ACT-like protein tyrosine kinase family protein 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc03G0020750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0020740 AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc03G0020730 AT1G16380.1 Cation/hydrogen exchanger family protein member of Putative Na+/H+ antiporter family Cation/hydrogen exchanger family protein;(source:Araport11) Ipc03G0020720 AT3G51390.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc03G0020710 AT4G35730.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc03G0020700 AT3G62810.2 0 0 complex 1 family protein / LVR family protein;(source:Araport11) Ipc03G0020690 AT4G35720.1 Arabidopsis protein of unknown function (DUF241) 0 DUF241 domain protein, putative (DUF241);(source:Araport11) Ipc03G0020680 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc03G0020670 AT2G17040.1 NAC domain containing protein 36 Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis. The mRNA is cell-to-cell mobile. NAC domain containing protein 36;(source:Araport11) Ipc03G0020660 AT3G12500.1 basic chitinase encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase;(source:Araport11) Ipc03G0020650 AT4G38380.5 0 0 MATE efflux family protein;(source:Araport11) Ipc03G0020640 AT3G51430.1 Calcium-dependent phosphotriesterase superfamily protein Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc03G0020630 AT3G51430.1 Calcium-dependent phosphotriesterase superfamily protein Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc03G0020620 AT3G51420.1 strictosidine synthase-like 4 Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. strictosidine synthase-like 4;(source:Araport11) Ipc03G0020610 AT4G35260.1 isocitrate dehydrogenase 1 Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. isocitrate dehydrogenase 1;(source:Araport11) Ipc03G0020600 AT5G66030.1 Golgi-localized GRIP domain-containing protein Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization. Golgi-localized GRIP domain-containing protein;(source:Araport11) Ipc03G0020590 AT4G35630.1 phosphoserine aminotransferase Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. The mRNA is cell-to-cell mobile. phosphoserine aminotransferase;(source:Araport11) Ipc03G0020580 AT1G20610.1 Cyclin B2;3 0 Cyclin B2;(source:Araport11) Ipc03G0020570 AT2G17200.1 ubiquitin family protein Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12. ubiquitin family protein;(source:Araport11) Ipc03G0020560 AT1G51070.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH115 is a basic helix loop helix protein of the IVc subgroup that plays a role in iron homeostasis. It interacts with related family members and targets PYE and other genes involved in response to Fe. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0020550 AT4G35700.1 zinc finger (C2H2 type) family protein Target promoter of the male germline-specific transcription factor DUO1. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc03G0020540 AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain 0 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein;(source:Araport11) Ipc03G0020530 AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein;(source:Araport11) Ipc03G0020520 AT3G51460.1 Phosphoinositide phosphatase family protein Encodes RHD4 (ROOT HAIR DEFECTIVE4), a phosphatidylinositol-4-phosphate phosphatase required for root hair development. The mRNA is cell-to-cell mobile. Phosphoinositide phosphatase family protein;(source:Araport11) Ipc03G0020510 AT2G21100.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc03G0020500 AT2G17220.1 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc03G0020490 AT2G17220.1 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc03G0020480 AT2G17220.2 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc03G0020470 AT2G17220.2 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc03G0020460 AT3G06540.1 Rab escort protein Encodes a cytoplasmic Rab escort protein that preferentially binds the GDP-bound form of Rab and stimulates geranylgeranylation of various Rab GTPases in Arabidopsis extracts in vitro. Rab escort protein;(source:Araport11) Ipc03G0020450 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0020440 AT1G20693.2 high mobility group B2 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B2;(source:Araport11) Ipc03G0020430 AT4G35560.1 Transducin/WD40 repeat-like superfamily protein Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0020420 AT4G35560.2 Transducin/WD40 repeat-like superfamily protein Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0020410 AT4G35560.1 Transducin/WD40 repeat-like superfamily protein Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0020400 AT2G17550.2 0 0 RB1-inducible coiled-coil protein;(source:Araport11) Ipc03G0020390 AT5G10290.2 0 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc03G0020380 AT1G22340.1 UDP-glucosyl transferase 85A7 0 UDP-glucosyl transferase 85A7;(source:Araport11) Ipc03G0020370 AT1G22400.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0020360 AT1G22340.1 UDP-glucosyl transferase 85A7 0 UDP-glucosyl transferase 85A7;(source:Araport11) Ipc03G0020350 AT5G10310.2 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc03G0020340 AT4G08980.5 F-BOX WITH WD-40 2 Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response. It is a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins. F-BOX WITH WD-40 2;(source:Araport11) Ipc03G0020330 AT5G65250.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0020320 AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0020310 AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0020300 AT5G65270.1 RAB GTPase homolog A4A 0 RAB GTPase homolog A4A;(source:Araport11) Ipc03G0020290 AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein TRM4B is a cytosine-5--methyltransferase. Mutants have decreased methyl cytosine and defects in root development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0020280 AT4G40010.1 SNF1-related protein kinase 2.7 encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. SNF1-related protein kinase 2.7;(source:Araport11) Ipc03G0020270 AT5G65280.1 GCR2-like 1 Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase. GCR2-like 1;(source:Araport11) Ipc03G0020260 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc03G0020250 AT4G40020.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc03G0020240 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0020230 AT5G10980.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc03G0020220 AT4G40050.1 Protein of unknown function (DUF3550/UPF0682) 0 signal transducer, putative (DUF3550/UPF0682);(source:Araport11) Ipc03G0020210 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0020200 AT1G20823.1 RING/U-box superfamily protein Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc03G0020190 AT3G51490.2 tonoplast monosaccharide transporter3 0 tonoplast monosaccharide transporter3;(source:Araport11) Ipc03G0020180 AT2G17270.1 phosphate transporter 3;3 Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress. phosphate transporter 3;(source:Araport11) Ipc03G0020170 AT4G35470.1 plant intracellular ras group-related LRR 4 Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. plant intracellular ras group-related LRR 4;(source:Araport11) Ipc03G0020160 AT2G33620.4 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc03G0020150 AT1G19100.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes a member of the conserved Microrchidia (MORC) adenosine triphosphatase (ATPase) family, predicted to catalyze alterations in chromosome superstructure. Required for heterochromatin condensation and gene silencing. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc03G0020140 AT5G65950.1 0 TRAPPIII complex protein which regulates TGN integrity, by altered TGN/EE association of several residents, including SYNTAXIN OF PLANTS 61 (SYP61), and altered vesicle morphology. Involved in regulation of endosomal function and salt stress response. trafficking protein particle complex subunit-like protein;(source:Araport11) Ipc03G0020130 AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0020120 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc03G0020110 AT1G20550.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc03G0020100 AT5G63870.2 serine/threonine phosphatase 7 Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling. serine/threonine phosphatase 7;(source:Araport11) Ipc03G0020090 AT3G51520.1 diacylglycerol acyltransferase family Encodes a functional acyl-CoA:diacylglycerol acyltransferase with different acyl-CoA substrate preferences and shows higher DAG to TAG conversion rate than AtDGAT1. It increases both C18:2 and C18:3 polyunsaturated fatty acids at the expense of C16:0. diacylglycerol acyltransferase family;(source:Araport11) Ipc03G0020080 AT1G20925.1 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc03G0020070 AT1G76520.2 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc03G0020060 AT3G51520.1 diacylglycerol acyltransferase family Encodes a functional acyl-CoA:diacylglycerol acyltransferase with different acyl-CoA substrate preferences and shows higher DAG to TAG conversion rate than AtDGAT1. It increases both C18:2 and C18:3 polyunsaturated fatty acids at the expense of C16:0. diacylglycerol acyltransferase family;(source:Araport11) Ipc03G0020050 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc03G0020040 AT2G04160.1 Subtilisin-like serine endopeptidase family protein isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc03G0020030 AT5G06740.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc03G0020020 AT5G06740.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc03G0020010 AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. kinesin-like calmodulin-binding protein (ZWICHEL);(source:Araport11) Ipc03G0020000 AT5G37020.1 auxin response factor 8 Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. auxin response factor 8;(source:Araport11) Ipc03G0019990 AT1G65720.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0019980 AT5G16370.1 acyl activating enzyme 5 0 acyl activating enzyme 5;(source:Araport11) Ipc03G0019970 AT5G16370.1 acyl activating enzyme 5 0 acyl activating enzyme 5;(source:Araport11) Ipc03G0019960 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc03G0019950 AT4G00990.1 Transcription factor jumonji (jmjC) domain-containing protein jJumonji-domain-containing H3K9 histone demethylase. Loss of function mutants are susceptible to bacterial infection and early flowering. Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc03G0019940 AT3G02680.1 nijmegen breakage syndrome 1 DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and MRE11 nijmegen breakage syndrome 1;(source:Araport11) Ipc03G0019930 AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Encodes NHL6 (NDR1/HIN1-like 6). Plays an important role in the abiotic stresses-induced ABA signaling and biosynthesis, particularly during seed germination and early seedling development. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc03G0019920 AT1G65700.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc03G0019910 AT3G02690.1 nodulin MtN21 /EamA-like transporter family protein Nucleotide/sugar transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0019900 AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0019890 AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0019880 AT5G37150.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0019870 AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0019860 AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0019850 AT3G02720.1 Class I glutamine amidotransferase-like superfamily protein Encodes a glyoxalase with high activity towards glyoxal and methylglyoxal. It differs from its animal and bacterial homologs with respect to the configuration of its catalytic residues and the oligomeric property of the enzyme. The mRNA is cell-to-cell mobile. Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc03G0019840 AT4G08040.1 1-aminocyclopropane-1-carboxylate synthase 11 encodes an aminotransferase that belongs to ACC synthase gene family structurally 1-aminocyclopropane-1-carboxylate synthase 11;(source:Araport11) Ipc03G0019830 AT3G49700.1 1-aminocyclopropane-1-carboxylate synthase 9 encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings. 1-aminocyclopropane-1-carboxylate synthase 9;(source:Araport11) Ipc03G0019820 AT1G65840.1 polyamine oxidase 4 encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes. The mRNA is cell-to-cell mobile. polyamine oxidase 4;(source:Araport11) Ipc03G0019810 AT5G45130.1 RAB homolog 1 small GTP binding protein The mRNA is cell-to-cell mobile. Ras small GTP-binding family protein;(source:Araport11) Ipc03G0019800 AT1G66120.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc03G0019790 AT5G17220.1 glutathione S-transferase phi 12 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts. glutathione S-transferase phi 12;(source:Araport11) Ipc03G0019780 AT5G17230.4 0 Encodes phytoene synthase that is the rate-limiting enzyme in the carotenoid biosynthetic pathway and that interacts with the ORANGE (OR) protein. PSY Primes expression is posttransciptionally regulated by OR. PHYTOENE SYNTHASE;(source:Araport11) Ipc03G0019770 AT1G73370.3 0 Encodes a protein with sucrose synthase activity (SUS6). sucrose synthase 6;(source:Araport11) Ipc03G0019760 AT5G16560.1 Homeodomain-like superfamily protein Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis. Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0019750 AT5G16550.1 0 Lipid droplet protein associated with LDAP3. voltage-dependent L-type calcium channel subunit;(source:Araport11) Ipc03G0019740 AT5G37370.1 PRP38 family protein encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt. PRP38 family protein;(source:Araport11) Ipc03G0019730 AT2G01970.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc03G0019720 AT5G17330.1 glutamate decarboxylase Encodes one of two isoforms of glutamate decarboxylase. The mRNA is cell-to-cell mobile. glutamate decarboxylase;(source:Araport11) Ipc03G0019710 AT1G73360.1 homeodomain GLABROUS 11 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching. The transcription factor directly upregulates the expression of several cell-wall-loosening protein genes and reveals the important role that these target genes play in coordinating cell-wall extensibility with root development. homeodomain GLABROUS 11;(source:Araport11) Ipc03G0019700 AT3G03220.1 expansin A13 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A13;(source:Araport11) Ipc03G0019690 AT3G03210.1 0 0 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein;(source:Araport11) Ipc03G0019680 AT5G17290.1 autophagy protein Apg5 family Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. autophagy protein Apg5 family;(source:Araport11) Ipc03G0019670 AT1G65910.1 NAC domain containing protein 28 0 NAC domain containing protein 28;(source:Araport11) Ipc03G0019660 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc03G0019650 AT3G14330.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of psbE. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0019640 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc03G0019630 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc03G0019620 AT1G56120.3 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc03G0019610 AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 3;(source:Araport11) Ipc03G0019600 AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 3;(source:Araport11) Ipc03G0019590 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc03G0019580 AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 3;(source:Araport11) Ipc03G0019570 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc03G0019560 AT1G23540.2 0 Encodes a member of the PERK family of putative receptor kinases. Overexpression leads to morphological defects and reduced fertility and increased expression of MAX genes. Protein kinase superfamily protein;(source:Araport11) Ipc03G0019550 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc03G0019540 AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 3;(source:Araport11) Ipc03G0019530 AT1G66140.1 zinc finger protein 4 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 4;(source:Araport11) Ipc03G0019520 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc03G0019510 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0019500 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc03G0019490 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc03G0019480 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc03G0019470 AT5G37490.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0019460 AT3G05390.1 0 0 S-adenosyl-L-methionine-dependent methyltransferase;(source:Araport11) Ipc03G0019450 AT1G66170.1 RING/FYVE/PHD zinc finger superfamily protein Encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to nuclear euchromatin specifically during diplotene. Required to regulate microtubule organization and cell cycle transitions during male meiosis, and functions as a direct transcription activator of the meiotic gene TDM1. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0019440 AT3G02850.1 STELAR K+ outward rectifier Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+. Involved in response to low potassium. STELAR K+ outward rectifier;(source:Araport11) Ipc03G0019430 AT3G02860.1 zinc ion binding Encodes a C2H2 zinc finger protein that is localized to the nucleus and is translocated to the cytoplasm in response to ABA or oxidative stress. It functions as a positive regulator countering ABA to break seed dormancy and maintain ROS homeostasis in response to ABA and oxidative stress. zinc ion binding protein;(source:Araport11) Ipc03G0019420 AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a pectin methylesterase that is sensitive to chilling stress and brassinosteroid regulation. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc03G0019410 AT1G66180.1 Eukaryotic aspartyl protease family protein The gene encodes a putative aspartyl protease (ASP). Its expression is induced in response to light and ascorbate. The mRNA is cell-to-cell mobile. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0019400 AT1G09680.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0019390 AT5G37550.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0019380 AT5G37590.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0019370 AT5G37600.1 glutamine synthase clone R1 encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium hypothetical protein;(source:Araport11) Ipc03G0019360 AT5G37630.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0019350 AT5G37660.1 plasmodesmata-located protein 7 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. plasmodesmata-located protein 7;(source:Araport11) Ipc03G0019340 AT5G17190.1 0 0 B-cell receptor-associated-like protein;(source:Araport11) Ipc03G0019330 AT5G20935.1 0 0 DUF3148 family protein;(source:Araport11) Ipc03G0019320 AT1G48480.1 receptor-like kinase 1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene receptor-like kinase 1;(source:Araport11) Ipc03G0019310 AT1G70700.2 TIFY domain/Divergent CCT motif family protein JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. The mRNA is cell-to-cell mobile. TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc03G0019300 AT5G37680.1 ADP-ribosylation factor-like A1A A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. ADP-ribosylation factor-like A1A;(source:Araport11) Ipc03G0019290 AT5G16600.1 myb domain protein 43 Encodes a putative transcription factor (MYB43). myb domain protein 43;(source:Araport11) Ipc03G0019280 AT5G16610.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0019270 AT1G66250.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc03G0019260 AT5G37690.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc03G0019250 AT5G37710.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0019240 AT5G37720.2 0 Encodes a member of a family of proteins involved in export of RNAs from the nucleus and transcriptional coactivation. ALWAYS EARLY 4;(source:Araport11) Ipc03G0019230 AT1G14900.1 high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A;(source:Araport11) Ipc03G0019220 AT5G28040.2 0 Member of the GeBP/GPL family of leucine zipper transcription factors. VPF4 interacts with the F-box proteins from A.tumefaciens VirF and VBF. Over expression results in decreased tumor formation upon Agrobacterium infection. Mutants show changes in the level of expression of defense response genes. DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc03G0019210 AT4G36810.1 geranylgeranyl pyrophosphate synthase 1 Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. The mRNA is cell-to-cell mobile. geranylgeranyl pyrophosphate synthase 1;(source:Araport11) Ipc03G0019200 AT2G01570.1 GRAS family transcription factor family protein Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development. GRAS family transcription factor family protein;(source:Araport11) Ipc03G0019190 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc03G0019180 AT1G09910.3 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc03G0019160 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0019170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0019150 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc03G0019140 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc03G0019130 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc03G0019120 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc03G0019110 AT4G37990.1 elicitor-activated gene 3-2 Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. cinnamyl alcohol dehydrogenase 8;(source:Araport11) Ipc03G0019100 AT4G37980.1 elicitor-activated gene 3-1 NADPH-dependent cinnamaldehyde and hexenal reductase involved in the production of green leaf volitile compounds. cinnamyl alcohol dehydrogenase 7;(source:Araport11) Ipc03G0019090 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc03G0019080 AT3G11220.1 Paxneb protein-related A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Paxneb protein-like protein;(source:Araport11) Ipc03G0019060 AT5G65590.1 Dof-type zinc finger DNA-binding family protein Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc03G0019070 AT5G60200.1 TARGET OF MONOPTEROS 6 Encodes a Dof-type transcription factor. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. TARGET OF MONOPTEROS 6;(source:Araport11) Ipc03G0019050 AT2G22610.3 0 0 Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11) Ipc03G0019040 AT4G38020.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc03G0019030 AT4G38040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc03G0019020 AT2G22600.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc03G0019010 AT2G22590.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0019000 AT2G22590.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0018990 AT5G65540.1 0 0 transcription initiation factor TFIID subunit;(source:Araport11) Ipc03G0018980 AT5G65530.1 Protein kinase superfamily protein Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_ Protein kinase superfamily protein;(source:Araport11) Ipc03G0018970 AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0018960 AT5G10510.6 0 Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Intronic sequences are required for its expression in flowers.Acts redundantly with PLT5 and 7 in lateral root pattern formation. AINTEGUMENTA-like 6;(source:Araport11) Ipc03G0018950 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0018940 AT5G65500.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc03G0018930 AT4G38050.1 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc03G0018920 AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein 0 mitochondrial ribosomal protein L51/S25/CI-B8 family protein;(source:Araport11) Ipc03G0018910 AT5G65490.1 0 0 suppressor-like protein;(source:Araport11) Ipc03G0018900 AT4G38060.4 0 0 hypothetical protein;(source:Araport11) Ipc03G0018890 AT5G54490.1 pinoid-binding protein 1 Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. pinoid-binding protein 1;(source:Araport11) Ipc03G0018880 AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0018870 AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0018860 AT5G10490.1 MSCS-like 2 A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSCS-like 2;(source:Araport11) Ipc03G0018850 AT5G65470.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc03G0018840 AT5G10480.1 Protein-tyrosine phosphatase-like, PTPLA Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids). Protein-tyrosine phosphatase-like, PTPLA;(source:Araport11) Ipc03G0018830 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc03G0018820 AT1G55990.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc03G0018810 AT5G65450.1 ubiquitin-specific protease 17 Encodes a ubiquitin-specific protease. The mRNA is cell-to-cell mobile. ubiquitin-specific protease 17;(source:Araport11) Ipc03G0018800 AT2G22500.1 uncoupling protein 5 Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470). uncoupling protein 5;(source:Araport11) Ipc03G0018790 AT4G01150.1 0 0 CURVATURE THYLAKOID 1A-like protein;(source:Araport11) Ipc03G0018780 AT5G65430.1 general regulatory factor 8 member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 general regulatory factor 8;(source:Araport11) Ipc03G0018770 AT5G65420.1 CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. CYCLIN D4;(source:Araport11) Ipc03G0018760 AT1G26290.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0018750 AT4G24660.1 homeobox protein 22 0 homeobox protein 22;(source:Araport11) Ipc03G0018740 AT4G24380.1 0 0 dihydrofolate reductase;(source:Araport11) Ipc03G0018730 #N/A #N/A #N/A #N/A Ipc03G0018720 AT1G35230.1 arabinogalactan protein 5 Encodes arabinogalactan-protein (AGP5). The mRNA is cell-to-cell mobile. arabinogalactan protein 5;(source:Araport11) Ipc03G0018710 AT5G65380.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc03G0018700 AT5G65380.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc03G0018690 AT4G40080.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc03G0018680 AT5G65340.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc03G0018670 AT3G13820.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc03G0018660 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0018650 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0018640 AT2G46550.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0018630 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc03G0018620 AT5G64290.1 dicarboxylate transport 2.1 0 dicarboxylate transport 2.1;(source:Araport11) Ipc03G0018610 AT2G22430.1 homeobox protein 6 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis. homeobox protein 6;(source:Araport11) Ipc03G0018600 AT4G26510.4 0 One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively. uridine kinase-like 4;(source:Araport11) Ipc03G0018590 AT1G42540.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.3;(source:Araport11) Ipc03G0018580 AT1G05200.6 0 Encodes a putative glutamate receptor GLR3 with dual localization in plastid and plasma membrane. glutamate receptor 3.4;(source:Araport11) Ipc03G0018570 AT1G42540.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.3;(source:Araport11) Ipc03G0018560 AT1G42540.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.3;(source:Araport11) Ipc03G0018550 AT3G51480.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.6;(source:Araport11) Ipc03G0018540 AT3G51470.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc03G0018530 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0018520 AT4G20310.9 0 Encodes a Golgi-localized protease that can cleave the transcription factors bZIP17 and bZIP28 that are translocated from the ER through the Golgi so that the transcription factors can be released to translocate into the nucleus. Peptidase M50 family protein;(source:Araport11) Ipc03G0018510 AT4G20310.8 0 Encodes a Golgi-localized protease that can cleave the transcription factors bZIP17 and bZIP28 that are translocated from the ER through the Golgi so that the transcription factors can be released to translocate into the nucleus. Peptidase M50 family protein;(source:Araport11) Ipc03G0018500 AT4G20310.8 0 Encodes a Golgi-localized protease that can cleave the transcription factors bZIP17 and bZIP28 that are translocated from the ER through the Golgi so that the transcription factors can be released to translocate into the nucleus. Peptidase M50 family protein;(source:Araport11) Ipc03G0018490 AT4G38250.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0018480 AT1G21630.1 Calcium-binding EF hand family protein TPLATE Adaptor complex subunit. Calcium-binding EF hand family protein;(source:Araport11) Ipc03G0018470 AT4G35510.1 0 0 PHD finger-like protein;(source:Araport11) Ipc03G0018460 AT4G35550.1 WUSCHEL related homeobox 13 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WUSCHEL related homeobox 13;(source:Araport11) Ipc03G0018450 AT1G34370.2 C2H2 and C2HC zinc fingers superfamily protein Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction. In vitro binding and mutated-promoter-GUS assays identified that STOP1 directly activates AtALMT1 expression through the binding to the promoter by four zinc finger domains. Binding of STOP1 to promoter is an essential step of Al-inducible AtALMT1 expression. The mRNA is cell-to-cell mobile. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc03G0018440 AT5G10280.1 myb domain protein 92 Encodes a putative transcription factor (MYB92). myb domain protein 92;(source:Araport11) Ipc03G0018430 AT4G39910.1 ubiquitin-specific protease 3 Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3;(source:Araport11) Ipc03G0018420 AT5G64970.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc03G0018410 AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0018400 AT4G39900.1 0 0 adenine deaminase;(source:Araport11) Ipc03G0018390 AT5G10260.1 RAB GTPase homolog H1E 0 RAB GTPase homolog H1E;(source:Araport11) Ipc03G0018380 AT4G39880.1 Ribosomal protein L23/L15e family protein 0 Ribosomal protein L23/L15e family protein;(source:Araport11) Ipc03G0018370 AT5G65000.1 Nucleotide-sugar transporter family protein Encodes an ER-localized facilitator of UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-N-acetylgalactosamine (UDP-GalNAc) transport. It also regulates the cytokinin signal in meristematic cells through modulating activity of cytokinin oxidases/dehydrogenases. Finally, it is an important part of the ER quality control system, which determines the fate of aberrant proteins in the secretory pathway. Nucleotide-sugar transporter family protein;(source:Araport11) Ipc03G0018360 AT5G65020.1 annexin 2 Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides. annexin 2;(source:Araport11) Ipc03G0018350 AT4G39860.4 0 0 hematological/neurological-like protein;(source:Araport11) Ipc03G0018340 AT4G39850.4 0 Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome. peroxisomal ABC transporter 1;(source:Araport11) Ipc03G0018330 AT2G43020.1 polyamine oxidase 2 Encodes a polyamine oxidase. polyamine oxidase 2;(source:Araport11) Ipc03G0018320 AT1G35830.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc03G0018310 AT5G65165.1 succinate dehydrogenase 2-3 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through desiccation, are abundant in dry seeds, and markedly decline during germination. succinate dehydrogenase 2-3;(source:Araport11) Ipc03G0018300 AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc03G0018290 AT5G16400.1 thioredoxin F2 Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma. thioredoxin F2;(source:Araport11) Ipc03G0018280 AT2G47840.1 Uncharacterised conserved protein ycf60 Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V). Uncharacterized conserved protein ycf60;(source:Araport11) Ipc03G0018270 AT3G07470.1 Protein of unknown function, DUF538 0 transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc03G0018260 AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein PLAT1 domain stress protein family member. Involved in mediating response to stresses such as pathogen infection. It is found in endoplasmic reticulum bodies. PLAT1 is induced by pathogenic fungi and induces the production of scopolin. Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11) Ipc03G0018250 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0018240 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0018230 AT1G45688.1 0 CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress. transmembrane protein;(source:Araport11) Ipc03G0018220 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc03G0018210 AT5G43420.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0018200 AT5G67020.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0018190 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc03G0018180 AT4G36990.1 heat shock factor 4 Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. heat shock factor 4;(source:Araport11) Ipc03G0018170 AT2G15680.1 Calcium-binding EF-hand family protein Encodes a calmodulin-like protein. Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0018160 AT5G66800.1 0 0 membrane-associated kinase regulator-like protein;(source:Araport11) Ipc03G0018150 AT3G19184.2 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc03G0018140 AT4G37030.1 0 0 membrane protein;(source:Araport11) Ipc03G0018130 AT3G50630.1 KIP-related protein 2 Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Gene was isolated from a yeast two hybrid screen as an interacting protein of CDC2A. Recombinant protein has a strong kinase inhibitor activity in vitro. Transcript is expressed in all tissues examined but is differentially distributed from ICK1. Controls the onset of the endoreduplication cycle through inhibition of CDKA;1. The KRP2 protein abundance is regulated by proteolysis through CDKB1;1 phosphorylation. KIP-related protein 2;(source:Araport11) Ipc03G0018120 AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity. Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc03G0018110 AT3G50610.1 0 0 DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11) Ipc03G0018100 AT3G50590.2 0 WD40/YVTN repeat protein. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0018090 AT2G26560.1 phospholipase A 2A Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus. phospholipase A 2A;(source:Araport11) Ipc03G0018080 AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase;(source:Araport11) Ipc03G0018070 AT5G66850.2 0 Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens. mitogen-activated protein kinase kinase kinase 5;(source:Araport11) Ipc03G0018060 AT5G66870.1 ASYMMETRIC LEAVES 2-like 1 Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination. ASYMMETRIC LEAVES 2-like 1;(source:Araport11) Ipc03G0018050 AT4G37180.1 Homeodomain-like superfamily protein UIF1 is a nuclear and cytoplasmically localized myb-domain containing member of the GARP G2-like subfamily of transcription factors. Interacts with ULT1 and binds to the WUS promoter. UIF1 binding domains are also found in CUC and AG promoters suggesting they are also direct targets. This locus was also identified as a putative cytoskeletal protein in a yeast screen. Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0018040 AT3G19080.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) Ipc03G0018030 AT2G23640.1 Reticulan like protein B13 Encodes RTNLB13, a reticulon protein integral to the endoplasmic reticulum (ER) membrane that have the ability to shape the ER into tubules. Reticulan like protein B13;(source:Araport11) Ipc03G0018020 AT5G66920.1 SKU5 similar 17 0 SKU5 similar 17;(source:Araport11) Ipc03G0018010 AT5G66930.2 0 0 meiotically up-regulated protein;(source:Araport11) Ipc03G0018000 AT3G50440.1 methyl esterase 10 Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro. methylesterase;(source:Araport11) Ipc03G0017990 AT3G50430.1 0 0 golgin;(source:Araport11) Ipc03G0017980 AT3G50410.1 OBF binding protein 1 Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development. OBF binding protein 1;(source:Araport11) Ipc03G0017970 AT5G56530.2 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase (DUF239);(source:Araport11) Ipc03G0017960 AT2G23520.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc03G0017950 AT5G66980.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc03G0017940 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc03G0017930 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc03G0017920 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc03G0017910 AT5G66985.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0017900 AT2G23450.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0017890 AT3G50830.1 cold-regulated 413-plasma membrane 2 cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable. cold-regulated 413-plasma membrane 2;(source:Araport11) Ipc03G0017880 AT3G50820.1 photosystem II subunit O-2 Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII. photosystem II subunit O-2;(source:Araport11) Ipc03G0017870 AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0017860 AT3G50810.3 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc03G0017850 AT2G23690.1 0 0 HTH-type transcriptional regulator;(source:Araport11) Ipc03G0017840 AT5G66590.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc03G0017830 AT5G66600.9 0 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc03G0017820 AT2G23740.6 0 Encodes a SET-domain protein SUVR5 that mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation-independent manner. histone-lysine N-methyltransferase SUVR5;(source:Araport11) Ipc03G0017810 AT2G23755.1 0 0 transmembrane family 220 helix protein;(source:Araport11) Ipc03G0017800 AT4G36870.2 BEL1-like homeodomain 2 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves. BEL1-like homeodomain 2;(source:Araport11) Ipc03G0017790 AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a putative LysM-containing receptor-like kinase LYK4. Shares overlapping function with LYK5 in mediating chitin-triggered immune responses. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc03G0017780 AT1G04540.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0017770 AT3G50760.1 galacturonosyltransferase-like 2 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase-like 2;(source:Araport11) Ipc03G0017760 AT2G23790.1 Protein of unknown function (DUF607) 0 calcium uniporter (DUF607);(source:Araport11) Ipc03G0017750 AT2G18630.1 Protein of unknown function (DUF677) 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc03G0017740 #N/A #N/A #N/A #N/A Ipc03G0017730 AT5G38630.1 cytochrome B561-1 Encodes for cytochrome b561. cytochrome B561-1;(source:Araport11) Ipc03G0017720 AT5G38600.1 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein 0 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0017710 AT3G02420.1 0 0 dihydroflavonol 4-reductase/flavanone protein;(source:Araport11) Ipc03G0017700 AT5G14700.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0017690 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc03G0017680 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc03G0017670 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc03G0017660 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc03G0017650 AT5G15870.1 glycosyl hydrolase family 81 protein 0 glycosyl hydrolase family 81 protein;(source:Araport11) Ipc03G0017640 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc03G0017630 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc03G0017620 AT5G15900.1 TRICHOME BIREFRINGENCE-LIKE 19 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 19;(source:Araport11) Ipc03G0017610 AT3G19660.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0017600 AT1G67180.2 0 0 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein;(source:Araport11) Ipc03G0017590 AT1G61600.1 Protein of unknown function (DUF1262) 0 DUF1262 family protein (DUF1262);(source:Araport11) Ipc03G0017580 AT5G38710.1 Methylenetetrahydrofolate reductase family protein 0 Methylenetetrahydrofolate reductase family protein;(source:Araport11) Ipc03G0017570 AT2G42720.1 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein 0 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc03G0017560 AT3G25570.2 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc03G0017550 AT5G16000.1 NSP-interacting kinase 1 NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). NSP-interacting kinase 1;(source:Araport11) Ipc03G0017540 AT2G22370.1 0 Encodes a subunit of the mediator complex that affects flowering time and floral organ formation through FLOWERING LOCUS C (FLC) and AGAMOUS (AG). Together with MED20, another subunit of the head domain of MEDIATOR, MED18 is proposed to control the balance of salicylic acid and jasmonate associated defense pathways. mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc03G0017530 AT2G21820.1 0 0 seed maturation protein;(source:Araport11) Ipc03G0017520 AT3G02380.1 CONSTANS-like 2 homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins CONSTANS-like 2;(source:Araport11) Ipc03G0017510 AT4G18880.1 heat shock transcription factor A4A Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses. heat shock transcription factor A4A;(source:Araport11) Ipc03G0017500 AT4G25760.1 glutamine dumper 2 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 2;(source:Araport11) Ipc03G0017490 AT3G02350.1 galacturonosyltransferase 9 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase 9;(source:Araport11) Ipc03G0017480 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc03G0017470 AT3G30390.3 0 Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0017460 AT5G15680.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0017450 AT5G15700.1 DNA/RNA polymerases superfamily protein Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast. DNA/RNA polymerases superfamily protein;(source:Araport11) Ipc03G0017440 AT3G30380.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0017420 AT3G30300.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc03G0017430 AT3G30350.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor-like protein;(source:Araport11) Ipc03G0017410 AT5G15730.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0017400 AT5G15740.1 O-fucosyltransferase family protein RRT1 is a member of a novel glycosyltransferase famly in plants. It functions as a rhamnosyltransferase, elongating the RG-1 backbone. It functions during seed coat mucilage development. O-fucosyltransferase family protein;(source:Araport11) Ipc03G0017390 AT3G02260.2 0 Calossin-like protein required for polar auxin transport auxin transport protein (BIG);(source:Araport11) Ipc03G0017380 AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc03G0017370 AT3G45070.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a sulfotransferase with sulfating activity toward flavonoids. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0017360 AT5G38895.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0017350 AT5G60910.1 AGAMOUS-like 8 MADS box gene negatively regulated by APETALA1 AGAMOUS-like 8;(source:Araport11) Ipc03G0017340 AT3G02310.1 K-box region and MADS-box transcription factor family protein MADS-box protein, binds K domain of AG in vivo K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc03G0017330 AT5G15650.1 reversibly glycosylated polypeptide 2 RGP2 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1(at3g02230)/rgp2 double mutants have a male gametophyte lethal phenotype. RGP2 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. RGP2 was originally identified as Reversibly Glycosylated Polypeptide-2. Constitutive expression in tobacco impairs plant development and virus spread. reversibly glycosylated polypeptide 2;(source:Araport11) Ipc03G0017320 AT3G30180.1 brassinosteroid-6-oxidase 2 Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control. brassinosteroid-6-oxidase 2;(source:Araport11) Ipc03G0017310 AT2G05710.1 aconitase 3 Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. aconitase 3;(source:Araport11) Ipc03G0017300 AT5G60920.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc03G0017290 AT5G15640.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc03G0017280 AT4G15800.1 ralf-like 33 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile. ralf-like 33;(source:Araport11) Ipc03G0017270 AT4G25970.1 phosphatidylserine decarboxylase 3 Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER. The mRNA is cell-to-cell mobile. phosphatidylserine decarboxylase 3;(source:Araport11) Ipc03G0017260 AT3G29780.1 ralf-like 27 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 27;(source:Araport11) Ipc03G0017250 AT4G15800.1 ralf-like 33 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile. ralf-like 33;(source:Araport11) Ipc03G0017240 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc03G0017230 AT5G39000.1 Malectin/receptor-like protein kinase family protein Involved in growth adaptation upon exposure to metal ions. Contributes together with the other MDS genes to the complex network of CrRLK1Ls that positively and negatively affect growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0017220 AT5G19180.2 0 Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. E1 C-terminal related 1;(source:Araport11) Ipc03G0017210 AT5G39000.1 Malectin/receptor-like protein kinase family protein Involved in growth adaptation upon exposure to metal ions. Contributes together with the other MDS genes to the complex network of CrRLK1Ls that positively and negatively affect growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0017200 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0017190 AT5G54380.1 protein kinase family protein Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. protein kinase family protein;(source:Araport11) Ipc03G0017180 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0017170 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0017160 AT3G02200.2 Proteasome component (PCI) domain protein 0 Proteasome component (PCI) domain protein;(source:Araport11) Ipc03G0017150 AT1G69230.2 SPIRAL1-like2 SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. SPIRAL1-like2;(source:Araport11) Ipc03G0017140 AT3G29770.1 methyl esterase 11 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 11;(source:Araport11) Ipc03G0017130 AT3G29760.5 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0017120 AT1G74160.3 0 Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation. LONGIFOLIA protein;(source:Araport11) Ipc03G0017110 AT5G15570.1 Bromodomain transcription factor 0 Bromodomain transcription factor;(source:Araport11) Ipc03G0017100 AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5;(source:Araport11) Ipc03G0017090 AT5G08060.1 0 0 furry;(source:Araport11) Ipc03G0017080 AT3G29575.4 ABI five binding protein 3 0 ABI five binding protein 3;(source:Araport11) Ipc03G0017070 AT3G02130.1 receptor-like protein kinase 2 Encodes a receptor-like kinase RPK2 (also known as TOADSTOOL 2/TOAD2). Functions as a regulator of meristem maintenance. Mutants are insensitive to synthetic CLV3 peptide. Mutations in the RPK2 also result in stem cell expansion and increased number of floral organs, as seen in the other clv mutants. Forms homo-oligomers. receptor-like protein kinase 2;(source:Araport11) Ipc03G0017060 AT2G03630.2 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc03G0017050 AT3G02120.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0017040 AT3G02110.1 serine carboxypeptidase-like 25 0 serine carboxypeptidase-like 25;(source:Araport11) Ipc03G0017030 AT3G29400.1 exocyst subunit exo70 family protein E1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein E1;(source:Araport11) Ipc03G0017020 AT5G61030.2 0 Encodes a glycine-rich RNA binding protein that is involved in C-> U RNA editing in mitochondria. Gene expression is induced by cold.The mRNA is cell-to-cell mobile. glycine-rich RNA-binding protein 3;(source:Araport11) Ipc03G0017010 AT1G13820.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0017000 AT5G15540.1 PHD finger family protein Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis. PHD finger family protein;(source:Araport11) Ipc03G0016990 AT3G02090.2 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc03G0016980 AT3G02080.1 Ribosomal protein S19e family protein 0 Ribosomal protein S19e family protein;(source:Araport11) Ipc03G0016970 AT5G15510.4 0 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc03G0016960 AT5G15490.1 UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein;(source:Araport11) Ipc03G0016950 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc03G0016940 AT3G29310.1 calmodulin-binding protein-related 0 calmodulin-binding protein-like protein;(source:Araport11) Ipc03G0016930 AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0016920 AT3G01040.3 0 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 13;(source:Araport11) Ipc03G0016910 AT5G39360.1 EID1-like 2 0 EID1-like 2;(source:Araport11) Ipc03G0016900 AT5G39380.5 0 0 Plant calmodulin-binding protein-like protein;(source:Araport11) Ipc03G0016890 AT3G29270.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0016880 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc03G0016870 AT5G15400.1 U-box domain-containing protein Single copy gene encoding a putative ubiquitin conjugating E4 factor. Contains Ub elongating factor core domain and C-terminal U-box. Involved in ubiquitination of NLRs. U-box domain-containing protein;(source:Araport11) Ipc03G0016860 AT3G21560.1 UDP-Glycosyltransferase superfamily protein Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0016850 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc03G0016840 AT3G29200.1 chorismate mutase 1 L-ascorbate peroxidase chorismate mutase 1;(source:Araport11) Ipc03G0016830 AT1G13960.1 WRKY DNA-binding protein 4 Encodes WRKY DNA-binding protein 4 (WRKY4). WRKY DNA-binding protein 4;(source:Araport11) Ipc03G0016820 AT5G39420.1 CDC2C 0 CDC2C;(source:Araport11) Ipc03G0016810 AT3G29180.3 0 0 DUF1336 family protein (DUF1336);(source:Araport11) Ipc03G0016800 AT1G13980.2 sec7 domain-containing protein Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions. BFA inhibits GNOM trafficking and BFA resistant lines are more resistant to cold stress. sec7 domain-containing protein;(source:Araport11) Ipc03G0016790 AT5G39530.1 Protein of unknown function (DUF1997) 0 hypothetical protein (DUF1997);(source:Araport11) Ipc03G0016780 AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc03G0016770 AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc03G0016760 AT5G61430.1 NAC domain containing protein 100 0 NAC domain containing protein 100;(source:Araport11) Ipc03G0016750 AT5G15300.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0016740 AT5G15270.3 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc03G0016730 AT5G39660.3 0 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2;(source:Araport11) Ipc03G0016720 AT3G01170.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc03G0016710 AT3G28970.1 Domain of unknown function (DUF298) Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family. defective in cullin neddylation protein (DUF298);(source:Araport11) Ipc03G0016700 AT3G01180.1 starch synthase 2 0 starch synthase 2;(source:Araport11) Ipc03G0016690 AT5G15240.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0016680 AT3G28920.1 homeobox protein 34 0 homeobox protein 34;(source:Araport11) Ipc03G0016670 AT5G39785.5 0 0 hypothetical protein (DUF1666);(source:Araport11) Ipc03G0016660 AT1G20770.1 0 0 coiled-coil protein;(source:Araport11) Ipc03G0016650 AT4G33355.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0016640 AT4G33355.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0016630 AT1G18800.1 NAP1-related protein 2 Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. Plant mutated in both NRP1 and NRP2 genes show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. NRP genes act synergistically with NAP1 genes in promoting somatic homologous recombination. NAP1-related protein 2;(source:Araport11) Ipc03G0016620 AT1G26830.1 cullin 3 Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3;(source:Araport11) Ipc03G0016610 AT3G47640.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0016600 AT3G28860.1 ATP binding cassette subfamily B19 Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. ATP binding cassette subfamily B19;(source:Araport11) Ipc03G0016590 AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc03G0016580 AT3G28850.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc03G0016570 AT3G47810.3 Calcineurin-like metallo-phosphoesterase superfamily protein Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc03G0016560 AT3G28760.1 0 0 3-dehydroquinate synthase;(source:Araport11) Ipc03G0016550 AT3G28715.1 ATPase, V0/A0 complex, subunit C/D 0 ATPase, V0/A0 complex, subunit C/D;(source:Araport11) Ipc03G0016540 AT5G39900.1 Small GTP-binding protein 0 Small GTP-binding protein;(source:Araport11) Ipc03G0016530 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc03G0016520 AT4G21220.1 Trimeric LpxA-like enzymes superfamily protein 0 Trimeric LpxA-like enzymes superfamily protein;(source:Araport11) Ipc03G0016510 AT2G02760.4 0 ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. ubiquiting-conjugating enzyme 2;(source:Araport11) Ipc03G0016500 AT1G74690.1 IQ-domain 31 Encodes a microtubule-associated protein. IQ-domain 31;(source:Araport11) Ipc03G0016490 AT3G54320.3 Integrase-type DNA-binding superfamily protein WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc03G0016480 AT3G28730.1 high mobility group encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC. high mobility group;(source:Araport11) Ipc03G0016470 AT5G15110.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc03G0016460 AT5G15100.1 Auxin efflux carrier family protein Encodes an auxin transporter with a strong expression in a male gametophyte. Mutant studies reveal a role for auxin transport in regulating pollen development and function. It acts together with PIN5. Auxin efflux carrier family protein;(source:Araport11) Ipc03G0016450 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc03G0016440 #N/A #N/A #N/A #N/A Ipc03G0016430 AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc03G0016420 AT5G15070.5 0 Encodes a functional VIP1/PPIP5K-type ATP-grasp kinase that is involved in both InsP6 to InsP7 conversion and InsP7 to InsP8 conversion. It is the minor isoform in plants and is expressed in pollen. Phosphoglycerate mutase-like family protein;(source:Araport11) Ipc03G0016410 AT5G39940.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc03G0016400 AT3G28630.1 Protein of unknown function (DUF569) 0 actin cross-linking protein, putative (DUF569);(source:Araport11) Ipc03G0016390 AT3G47870.1 LOB domain-containing protein 27 Required for normal cell division during pollen development. Mutant has extra cell in pollen of vegetative cell identity. Male gametophytic mutation. LOB domain-containing protein 27;(source:Araport11) Ipc03G0016380 AT5G40020.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc03G0016370 AT2G38110.1 glycerol-3-phosphate acyltransferase 6 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly. glycerol-3-phosphate acyltransferase 6;(source:Araport11) Ipc03G0016360 AT3G28480.1 Oxoglutarate/iron-dependent oxygenase 0 Oxoglutarate/iron-dependent oxygenase;(source:Araport11) Ipc03G0016350 AT3G28470.1 Duplicated homeodomain-like superfamily protein Member of the R2R3 factor gene family. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc03G0016340 AT3G63240.2 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc03G0016330 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc03G0016310 AT5G14970.1 0 0 seed maturation-like protein;(source:Araport11) Ipc03G0016320 AT1G70090.2 glucosyl transferase family 8 Encodes a protein with putative galacturonosyltransferase activity. glucosyl transferase family 8;(source:Araport11) Ipc03G0016300 AT3G48140.1 B12D protein 0 B12D protein;(source:Araport11) Ipc03G0016290 AT3G01330.1 DP-E2F-like protein 3 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. DP-E2F-like protein 3;(source:Araport11) Ipc03G0016280 AT5G14950.1 golgi alpha-mannosidase II Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans. golgi alpha-mannosidase II;(source:Araport11) Ipc03G0016270 AT2G04620.1 Cation efflux family protein Encodes a Zn transporter that localizes to the Golgi apparatus and forms a functional complex with AtMTP5t1 to transport Zn into the Golgi. zinc transporter-like protein;(source:Araport11) Ipc03G0016260 AT5G14940.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0016250 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016240 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016230 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016220 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016210 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016200 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc03G0016190 AT2G04690.1 Pyridoxamine 5'-phosphate oxidase family protein 0 Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11) Ipc03G0016180 AT3G28210.2 0 Encodes a putative zinc finger protein (PMZ). zinc finger (AN1-like) family protein;(source:Araport11) Ipc03G0016170 AT3G28200.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc03G0016160 AT5G14920.1 Gibberellin-regulated family protein Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation. Gibberellin-regulated family protein;(source:Araport11) Ipc03G0016150 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0016140 AT3G28180.1 Cellulose-synthase-like C4 encodes a gene similar to cellulose synthase The mRNA is cell-to-cell mobile. Cellulose-synthase-like C4;(source:Araport11) Ipc03G0016130 AT5G40200.1 DegP protease 9 Encodes a putative DegP protease. The mRNA is cell-to-cell mobile. DegP protease 9;(source:Araport11) Ipc03G0016120 AT3G28050.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0016110 AT5G40240.3 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0016100 AT3G28030.2 0 Required for repair of pyrimidine-pyrimidinone (6-4) dimers.The mRNA is cell-to-cell mobile. 5-3 exonuclease family protein;(source:Araport11) Ipc03G0016090 AT5G14895.1 0 0 NHL domain protein;(source:Araport11) Ipc03G0016080 AT5G14890.1 NHL domain-containing protein 0 potassium transporter;(source:Araport11) Ipc03G0016070 AT5G14880.1 Potassium transporter family protein 0 Potassium transporter family protein;(source:Araport11) Ipc03G0016060 AT1G70310.1 spermidine synthase 2 Spermidine synthase. spermidine synthase 2;(source:Araport11) Ipc03G0016050 AT4G02010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0016040 AT2G16890.2 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0016030 AT5G14790.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0016020 AT3G01460.1 methyl-CPG-binding domain 9 Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes. methyl-CPG-binding domain 9;(source:Araport11) Ipc03G0016010 AT3G01480.1 cyclophilin 38 Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes. The mRNA is cell-to-cell mobile. cyclophilin 38;(source:Araport11) Ipc03G0016000 AT5G40270.1 HD domain-containing metal-dependent phosphohydrolase family protein Protein of unknown function involved in chloroplast development. HD domain-containing metal-dependent phosphohydrolase family protein;(source:Araport11) Ipc03G0015990 AT3G55250.1 0 Encodes a nucleus-encoded protein, Photosystem I Assembly 3 (PSA3), that is required for PSI accumulation. calcium homeostasis regulator;(source:Araport11) Ipc03G0015980 AT5G14780.1 formate dehydrogenase Encodes a NAD-dependent formate dehydrogenase. formate dehydrogenase;(source:Araport11) Ipc03G0015970 AT5G40300.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc03G0015960 AT3G27970.1 Exonuclease family protein 0 Exonuclease family protein;(source:Araport11) Ipc03G0015950 AT5G14760.1 L-aspartate oxidase At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 L-aspartate oxidase;(source:Araport11) Ipc03G0015940 AT1G10270.1 glutamine-rich protein 23 0 glutamine-rich protein 23;(source:Araport11) Ipc03G0015930 AT3G27930.1 0 Encodes a novel plant-specific beta-barrel protein that likely plays a role in the transport of metabolites and in leaf senescence. beta-galactosidase;(source:Araport11) Ipc03G0015920 AT3G01500.3 carbonic anhydrase 1 Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells. carbonic anhydrase 1;(source:Araport11) Ipc03G0015910 AT3G27880.1 Protein of unknown function (DUF1645) 0 hypothetical protein (DUF1645);(source:Araport11) Ipc03G0015900 AT3G27870.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc03G0015890 AT5G14720.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0015880 AT3G27670.1 ARM repeat superfamily protein A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development. The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc03G0015870 AT3G27700.2 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein 0 zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc03G0015860 AT5G40390.1 Raffinose synthase family protein Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. Raffinose synthase family protein;(source:Araport11) Ipc03G0015850 AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc03G0015840 AT5G14570.1 high affinity nitrate transporter 2.7 Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane. high affinity nitrate transporter 2.7;(source:Araport11) Ipc03G0015830 AT3G62400.1 0 0 cytochrome C oxidase subunit;(source:Araport11) Ipc03G0015820 AT5G14590.1 Isocitrate/isopropylmalate dehydrogenase family protein 0 Isocitrate/isopropylmalate dehydrogenase family protein;(source:Araport11) Ipc03G0015810 #N/A #N/A #N/A #N/A Ipc03G0015800 AT5G62960.1 0 0 UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein;(source:Araport11) Ipc03G0015790 AT5G14600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0015780 AT5G14610.6 0 0 DEAD box RNA helicase family protein;(source:Araport11) Ipc03G0015770 AT3G01516.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0015760 AT5G40480.1 embryo defective 3012 0 embryo defective 3012;(source:Araport11) Ipc03G0015750 AT5G47750.1 D6 protein kinase like 2 D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism. D6 protein kinase like 2;(source:Araport11) Ipc03G0015740 AT5G50180.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0015730 AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc03G0015720 AT3G27550.2 0 0 RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11) Ipc03G0015710 AT3G27540.1 beta-1,4-N-acetylglucosaminyltransferase family protein 0 beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0015700 AT5G40570.1 Surfeit locus protein 2 (SURF2) 0 Surfeit locus protein 2 (SURF2);(source:Araport11) Ipc03G0015690 AT5G14430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0015680 AT5G14420.4 RING domain ligase2 Encodes RGLG2 (RING domain ligase 2), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. RING domain ligase2;(source:Araport11) Ipc03G0015670 AT3G56510.5 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0015660 AT4G35860.1 GTP-binding 2 GTP-binding protein ATGB2 GTP-binding 2;(source:Araport11) Ipc03G0015650 AT5G63150.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0015640 AT3G27390.2 0 0 transmembrane protein;(source:Araport11) Ipc03G0015630 AT5G40650.1 succinate dehydrogenase 2-2 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. succinate dehydrogenase 2-2;(source:Araport11) Ipc03G0015610 AT3G27350.1 0 0 transcriptional regulator ATRX-like protein;(source:Araport11) Ipc03G0015620 AT5G40690.1 0 0 histone-lysine N-methyltransferase trithorax-like protein;(source:Araport11) Ipc03G0015600 AT5G40720.3 0 0 C3H4 type zinc finger protein (DUF23);(source:Araport11) Ipc03G0015590 AT3G27325.3 0 0 hydrolases, acting on ester bond;(source:Araport11) Ipc03G0015580 AT3G26020.6 0 Encodes protein phosphatase 2A (PP2A) B Primeeta subunit. Targeted to nucleus and cytosol. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc03G0015570 AT3G27310.1 plant UBX domain-containing protein 1 encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo. plant UBX domain-containing protein 1;(source:Araport11) Ipc03G0015560 AT5G40760.2 0 Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.The mRNA is cell-to-cell mobile. glucose-6-phosphate dehydrogenase 6;(source:Araport11) Ipc03G0015550 AT5G40780.1 lysine histidine transporter 1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. lysine histidine transporter 1;(source:Araport11) Ipc03G0015540 AT5G14285.1 0 0 DNA-binding storekeeper;(source:Araport11) Ipc03G0015530 AT3G27260.4 0 Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain global transcription factor group E8;(source:Araport11) Ipc03G0015520 AT5G40800.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0015510 AT5G63380.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc03G0015500 AT5G14250.2 Proteasome component (PCI) domain protein Encodes subunit 3 of the COP9 signalosome. Proteasome component (PCI) domain protein;(source:Araport11) Ipc03G0015490 AT5G14240.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc03G0015480 AT5G40840.4 0 Cohesion family protein SYN2 (SYN2). Plays a role in somatic DNA double strand break damage repair. Rad21/Rec8-like family protein;(source:Araport11) Ipc03G0015470 AT3G01810.3 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc03G0015460 AT3G01820.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0015450 AT3G01850.2 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc03G0015440 AT3G27210.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0015430 AT3G27170.1 chloride channel B member of Anion channel protein family The mRNA is cell-to-cell mobile. chloride channel B;(source:Araport11) Ipc03G0015420 AT5G14170.1 SWIB/MDM2 domain superfamily protein CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates. Also named as SWP73B, a subunit of the SWI/SNF chromatin remodeling complex. Acts as important modulator of major developmental pathways. SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc03G0015410 AT3G27110.2 Peptidase family M48 family protein PGM48 is a member of a plant specific clade of metallo-endopeptidase proteins. It is found in plastoglobules. Analysis of over-expression and loss of function phenotypes suggests PGM48 may have a role in positively regulating senescence. Peptidase family M48 family protein;(source:Araport11) Ipc03G0015390 AT3G01920.1 DHBP synthase RibB-like alpha/beta domain 0 DHBP synthase RibB-like alpha/beta domain-containing protein;(source:Araport11) Ipc03G0015400 AT1G23760.1 BURP domain-containing protein Encodes aromatic rich glycoprotein JP630. BURP domain-containing protein;(source:Araport11) Ipc03G0015380 AT3G27060.1 Ferritin/ribonucleotide reductase-like family protein Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development. Ferritin/ribonucleotide reductase-like family protein;(source:Araport11) Ipc03G0015370 AT5G14140.1 zinc ion binding;nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc03G0015360 AT3G26950.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0015350 AT2G33490.2 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0015340 AT1G12820.1 auxin signaling F-box 3 Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots. auxin signaling F-box 3;(source:Araport11) Ipc03G0015330 AT3G26780.1 Phosphoglycerate mutase family protein Encodes MEF14 (mitochondrial editing factor 14), a PPR (pentatricopeptide repeat proteins) protein required for RNA editing at site matR-1895 in mitochondria. The mRNA is cell-to-cell mobile. Phosphoglycerate mutase family protein;(source:Araport11) Ipc03G0015320 AT5G13280.1 aspartate kinase 1 Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH). aspartate kinase 1;(source:Araport11) Ipc03G0015310 AT2G02610.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc03G0015300 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0019960 AT2G30933.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc07G0019970 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0019980 AT5G26770.6 0 NEAP2 is a member of a small family containing coiled-coil domains, a nuclear localization signal and a C-terminal predicted transmembrane domain. It localizes to the nuclear periphery. Mutants have altered nuclear morphology and chromatin structure. myosin heavy chain, cardiac protein;(source:Araport11) Ipc07G0019990 AT3G27930.2 0 Encodes a novel plant-specific beta-barrel protein that likely plays a role in the transport of metabolites and in leaf senescence. beta-galactosidase;(source:Araport11) Ipc07G0020000 AT3G62200.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc07G0020010 AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein MTL1 is a mitochondria localized PRR protein involved in mitochondrial protein translation and group II intron splicing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0020020 AT1G09520.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0020030 AT1G57540.3 0 0 40S ribosomal protein;(source:Araport11) Ipc07G0020040 AT1G11910.1 aspartic proteinase A1 Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). aspartic proteinase A1;(source:Araport11) Ipc07G0020050 AT5G26610.3 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc07G0020060 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc07G0020070 AT5G27710.1 0 0 T-box protein;(source:Araport11) Ipc07G0020080 AT1G74875.1 0 0 F-box protein;(source:Araport11) Ipc07G0020090 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc07G0020100 AT3G52860.1 0 Encodes a mediator subunit,, important for development and senescence. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc07G0020110 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0020120 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc07G0020130 AT4G38760.1 Protein of unknown function (DUF3414) 0 nucleoporin (DUF3414);(source:Araport11) Ipc07G0020140 AT4G13610.1 DNA (cytosine-5-)-methyltransferase family protein 0 DNA (cytosine-5-)-methyltransferase family protein;(source:Araport11) Ipc07G0020150 AT5G26620.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0020160 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0020170 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc07G0020180 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0020190 AT3G21410.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0020200 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc07G0020210 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc07G0020220 AT1G48520.2 GLU-ADT subunit B Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836). GLU-ADT subunit B;(source:Araport11) Ipc07G0020230 AT1G78920.3 0 Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves. vacuolar H+-pyrophosphatase 2;(source:Araport11) Ipc07G0020240 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0020250 AT1G23100.1 GroES-like family protein 0 GroES-like family protein;(source:Araport11) Ipc07G0020260 AT5G07860.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0020270 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0020280 AT1G09540.1 myb domain protein 61 Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size. myb domain protein 61;(source:Araport11) Ipc07G0020290 AT3G05910.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc07G0020300 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0020310 AT1G69850.1 nitrate transporter 1:2 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems. nitrate transporter 1:2;(source:Araport11) Ipc07G0020320 AT1G57600.3 0 0 MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11) Ipc07G0020330 AT3G62020.1 germin-like protein 10 germin-like protein (GLP10) germin-like protein 10;(source:Araport11) Ipc07G0020340 AT4G37690.1 Galactosyl transferase GMA12/MNN10 family protein Unlike its close paralog MUCI10 (At2g22900), GT6 is not required for the biosynthesis of seed coat mucilage. GT6 is preferentially expressed in sub-epidermal cell layers of the seed coat. Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc07G0020350 AT1G09570.3 0 Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation. phytochrome A;(source:Araport11) Ipc07G0020360 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc07G0020370 AT5G26720.1 0 0 ubiquitin carboxyl-terminal hydrolase-like protein;(source:Araport11) Ipc07G0020380 AT4G19350.1 embryo defective 3006 0 embryo defective 3006;(source:Araport11) Ipc07G0020390 AT2G27650.1 Ubiquitin carboxyl-terminal hydrolase-related protein 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc07G0020400 AT3G05940.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc07G0020410 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0020420 AT3G62780.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc07G0020430 AT5G26731.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0020440 AT5G26742.2 DEAD box RNA helicase (RH3) 0 DEAD box RNA helicase (RH3);(source:Araport11) Ipc07G0020450 AT5G24210.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0020460 AT3G50910.1 0 0 netrin receptor DCC;(source:Araport11) Ipc07G0020470 AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0020480 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0020490 AT4G24250.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO13 belongs to the clade II, with ATMLO1 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and also in placenta of developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc07G0020500 AT2G02370.3 0 0 SNARE associated Golgi protein family;(source:Araport11) Ipc07G0020510 AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE1 0 SUPPRESSOR OF AUXIN RESISTANCE1;(source:Araport11) Ipc07G0020520 AT5G49720.1 glycosyl hydrolase 9A1 Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. glycosyl hydrolase 9A1;(source:Araport11) Ipc07G0020530 AT5G49730.1 ferric reduction oxidase 6 Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner. ferric reduction oxidase 6;(source:Araport11) Ipc07G0020540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0020550 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0004890 AT5G42560.1 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0 Abscisic acid-responsive (TB2/DP1, HVA22) family protein;(source:Araport11) Ipc04G0004880 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc04G0004870 AT2G36026.1 Ovate family protein 0 Ovate family protein;(source:Araport11) Ipc04G0004860 AT4G31520.2 0 0 SDA1 family protein;(source:Araport11) Ipc04G0004850 AT5G08340.1 Nucleotidylyl transferase superfamily protein 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc04G0004840 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc04G0004830 AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0004820 AT4G27000.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0004810 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0004800 AT3G11600.1 0 One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations. E3 ubiquitin-protein ligase;(source:Araport11) Ipc04G0004790 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0004780 AT5G04800.4 Ribosomal S17 family protein 0 Ribosomal S17 family protein;(source:Araport11) Ipc04G0004770 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0004760 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc04G0004750 AT2G22670.5 0 Encodes a transcriptional repressor of the auxin response that is auxin inducible and is involved in lateral root formation.The mRNA is cell-to-cell mobile. indoleacetic acid-induced protein 8;(source:Araport11) Ipc04G0004740 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004730 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004720 AT3G26115.3 0 0 Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc04G0004710 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004700 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004670 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004660 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004650 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004640 AT3G04130.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0004680 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004690 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004630 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0004620 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0004610 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc04G0004600 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0004590 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc04G0004580 AT1G08710.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0004570 AT3G19330.4 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc04G0004560 AT3G52580.1 Ribosomal protein S11 family protein 0 Ribosomal protein S11 family protein;(source:Araport11) Ipc04G0004550 AT5G06130.2 chaperone protein dnaJ-related Encodes an OR(orange)-like protein that interacts directly with the PSY (phytoene synthase) protein and acts as a positive posttranscriptional regulator of its expression, thereby affecting carotenoid biosynthesis. chaperone protein dnaJ-like protein;(source:Araport11) Ipc04G0004540 AT5G06140.1 sorting nexin 1 Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1. sorting nexin 1;(source:Araport11) Ipc04G0004530 #N/A #N/A #N/A #N/A Ipc04G0004520 AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0004510 AT2G36130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc04G0004500 AT3G06910.1 UB-like protease 1A Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity. UB-like protease 1A;(source:Araport11) Ipc04G0004490 AT1G73710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0004480 AT1G14800.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0004470 AT1G08370.1 decapping 1 Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2. decapping 1;(source:Araport11) Ipc04G0004460 AT5G06210.1 RNA binding (RRM/RBD/RNP motifs) family protein Encodes a chloroplast protein involved in the responses to salt and oxidative stresses. RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0004450 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc04G0004440 AT2G36200.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0004430 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0004420 AT5G07930.3 MEI2 C-terminal RRM only like 2 A member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only. MEI2 C-terminal RRM only like 2;(source:Araport11) Ipc04G0004410 AT3G59150.1 F-box/RNI-like superfamily protein 0 F-box/RNI superfamily protein;(source:Araport11) Ipc04G0004400 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0004390 AT1G06620.2 0 encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseThe mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0004380 AT3G52610.1 0 0 GATA zinc finger protein;(source:Araport11) Ipc04G0004370 AT1G65810.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0004360 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc04G0004350 AT5G22400.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc04G0004340 AT3G11470.1 4'-phosphopantetheinyl transferase superfamily Encodes one of three splice variants. Differs in having YQ in positions 88 and 89. The protein is localized to the mitochondria where it phosphopantetheinylates the mature apo mtACP isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal).P isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal). 4-phosphopantetheinyl transferase superfamily;(source:Araport11) Ipc04G0004330 AT5G03940.1 chloroplast signal recognition particle 54 kDa subunit mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit;(source:Araport11) Ipc04G0004320 AT3G52620.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0004310 AT1G57790.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0004300 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0004290 AT3G52720.4 0 Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast. Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding, ER export, trafficking and activity of the protein. alpha carbonic anhydrase 1;(source:Araport11) Ipc04G0004280 AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0004270 AT3G52720.4 0 Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast. Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding, ER export, trafficking and activity of the protein. alpha carbonic anhydrase 1;(source:Araport11) Ipc04G0004260 AT5G03880.1 Thioredoxin family protein 0 Thioredoxin family protein;(source:Araport11) Ipc04G0004250 AT5G18240.3 myb-related protein 1 Encodes MYR1 (MYR1). myb-related protein 1;(source:Araport11) Ipc04G0004240 AT3G57390.3 0 encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos. AGAMOUS-like 18;(source:Araport11) Ipc04G0004230 AT2G48060.3 0 0 piezo-type mechanosensitive ion channel component;(source:Araport11) Ipc04G0004220 AT3G52750.3 0 Nuclear gene that encodes a plastidial division protein (FtsZ2-2). FtsZ2-2 is involved in chloroplast morphology and internal organisation in addition to participating in chloroplast partition Tubulin/FtsZ family protein;(source:Araport11) Ipc04G0004210 AT3G52740.1 0 Plant specific protein.BIC1 and BIC2 inhibit cryptochrome function by blocking blue light-dependent cryptochrome dimerization.Light activated transcription of BICs is mediated by cryptochromes. hypothetical protein;(source:Araport11) Ipc04G0004200 AT2G26060.1 Transducin/WD40 repeat-like superfamily protein Encodes a homolog of the yeast Cytosolic Iron-sulfur protein Assembly protein CIA1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0004190 AT1G08360.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc04G0004180 AT5G15770.1 glucose-6-phosphate acetyltransferase 1 Encodes a putative glucose-6-phosphate acetyltransferase that is likely involved in UDP-N-acetylglucosamine biosynthesis. A GFP:GNA1 fusion protein localizes to the endoplasmic reticulum. glucose-6-phosphate acetyltransferase 1;(source:Araport11) Ipc04G0004170 AT2G16710.1 Iron-sulphur cluster biosynthesis family protein 0 Iron-sulfur cluster biosynthesis family protein;(source:Araport11) Ipc04G0004160 AT1G67190.2 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc04G0004150 AT3G17280.2 0 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc04G0004140 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0004130 AT2G36290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0004120 AT5G03840.1 PEBP (phosphatidylethanolamine-binding protein) family protein Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole. TFL1 plays an antagonistic role to FT/TSF in the determination of inflorescence meristem identity. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc04G0004110 AT2G36305.1 farnesylated protein-converting enzyme 2 Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast. farnesylated protein-converting enzyme 2;(source:Araport11) Ipc04G0004100 AT2G40390.1 0 0 neuronal PAS domain protein;(source:Araport11) Ipc04G0004090 AT3G10070.1 TBP-associated factor 12 Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. TBP-associated factor 12;(source:Araport11) Ipc04G0004080 AT2G33480.2 NAC domain containing protein 41 0 NAC domain containing protein 41;(source:Araport11) Ipc04G0004070 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0004060 AT2G36310.1 uridine-ribohydrolase 1 Encodes a cytoplasmic nucleoside hydrolase. It has the highest levels of activity with uridine followed by xanthosine. It shows little activity with inosine and none with cytidine. Mutant analyses indicate that it plays a role in purine and pyrimidine catabolism. uridine-ribohydrolase 1;(source:Araport11) Ipc04G0004050 AT2G33793.2 0 Encodes a protein component of the pre-synaptic chromosome axis. Mutants show quantitative defects in meiotic recombination. Interacts with ASY1/ASY3. DNA ligase-like protein;(source:Araport11) Ipc04G0004040 AT3G52790.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc04G0004030 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc04G0004020 AT3G52870.1 IQ calmodulin-binding motif family protein 0 IQ calmodulin-binding motif family protein;(source:Araport11) Ipc04G0004010 AT2G25220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0004000 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc04G0003990 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0003980 AT5G35695.1 0 0 nuclease HARBI1-like protein;(source:Araport11) Ipc04G0003970 AT3G52880.1 monodehydroascorbate reductase 1 Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 monodehydroascorbate reductase 1;(source:Araport11) Ipc04G0003960 AT5G54260.1 DNA repair and meiosis protein (Mre11) DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1 DNA repair and meiosis protein (Mre11);(source:Araport11) Ipc04G0003950 AT2G36370.1 ubiquitin-protein ligases 0 ubiquitin-protein ligase;(source:Araport11) Ipc04G0003940 AT4G21110.2 0 0 G10 family protein;(source:Araport11) Ipc04G0003930 AT5G66230.2 Chalcone-flavanone isomerase family protein 0 Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc04G0003920 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0003910 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc04G0003900 AT2G36420.1 0 0 nucleolin-like protein;(source:Araport11) Ipc04G0003890 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0003880 AT5G56600.2 profilin 3 Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs. Mutants have slightly elongated petioles. profilin;(source:Araport11) Ipc04G0003870 AT2G07785.1 NADH dehydrogenase family protein 0 NADH dehydrogenase family protein;(source:Araport11) Ipc04G0003860 AT3G22970.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc04G0003850 AT2G36460.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc04G0003840 AT1G67730.1 beta-ketoacyl reductase 1 Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. The mRNA is cell-to-cell mobile. beta-ketoacyl reductase 1;(source:Araport11) Ipc04G0003830 AT2G36480.2 ENTH/VHS family protein 0 pre-mRNA cleavage complex 2 Pcf11-like protein;(source:Araport11) Ipc04G0003820 AT5G24590.2 TCV-interacting protein Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. TCV-interacting protein;(source:Araport11) Ipc04G0003810 AT5G05560.3 0 Encodes a subunit of the Arabidopsis thaliana E3 ubiquitin ligase complex that plays a synergistic role with APC4 both in female gametogenesis and in embryogenesis. E3 ubiquitin ligase;(source:Araport11) Ipc04G0003800 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc04G0003790 AT3G53560.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0003780 AT3G07740.4 homolog of yeast ADA2 2A encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1 ADA2 2A;(source:Araport11) Ipc04G0003770 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc04G0003760 AT2G36530.1 Enolase Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. Enolase;(source:Araport11) Ipc04G0003750 AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0003740 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc04G0003730 AT3G59820.2 LETM1-like protein 0 LETM1-like protein;(source:Araport11) Ipc04G0003720 AT5G22650.2 histone deacetylase 2B Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation. histone deacetylase 2B;(source:Araport11) Ipc04G0003710 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003700 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc10G0018200 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018210 AT4G35650.1 isocitrate dehydrogenase III Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. In contrast to the broadly expressed other regulatory (IDH-I and IDH-II) and catalytic (IDH-V and IDH-VI) subunits of this enzyme, IDH-III expression appears to be restricted largely to pollen. isocitrate dehydrogenase III;(source:Araport11) Ipc10G0018220 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018230 AT2G29690.1 anthranilate synthase 2 Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis. anthranilate synthase 2;(source:Araport11) Ipc10G0018240 AT2G29700.1 pleckstrin homologue 1 Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension The mRNA is cell-to-cell mobile. pleckstrin homologue 1;(source:Araport11) Ipc10G0018250 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018260 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018270 AT2G40080.1 Protein of unknown function (DUF1313) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes. EARLY FLOWERING-like protein (DUF1313);(source:Araport11) Ipc10G0018280 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc10G0018290 AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc10G0018300 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018310 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018320 AT1G66160.1 CYS, MET, PRO, and GLY protein 1 0 CYS, MET, PRO, and GLY protein 1;(source:Araport11) Ipc10G0018330 AT3G49190.1 O-acyltransferase (WSD1-like) family protein 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc10G0018340 AT1G04050.2 0 Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. histone-lysine N-methyltransferase SUVR2-like protein;(source:Araport11) Ipc10G0018350 AT5G44160.2 0 NUC is a member of the BIRD group of transcriptional regulators and is required for the formative divisions that pattern the root. the ground tissue into cortex and endodermis. C2H2-like zinc finger protein;(source:Araport11) Ipc10G0018360 AT1G02860.1 SPX (SYG1/Pho81/XPR1) domain-containing protein Encodes a ubiquitin E3 ligase with RING and SPX domains that is involved in mediating immune responses and mediates degradation of PHT1s at plasma membranes. Targeted by MIR827. Ubiquitinates PHT1;3, PHT1;2, PHT1;1/AtPT1 and PHT1;4/AtPT2. SPX (SYG1/Pho81/XPR1) domain-containing protein;(source:Araport11) Ipc10G0018370 AT5G11920.2 6-&1-fructan exohydrolase Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. 6-%261-fructan exohydrolase;(source:Araport11) Ipc10G0018380 AT1G07220.1 Arabidopsis thaliana protein of unknown function (DUF821) 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc10G0018390 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc03G0026310 AT3G14110.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0001170 AT4G11770.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0001160 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0001150 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0001130 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc06G0001120 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc06G0001090 AT4G38120.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0001110 AT4G38120.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0001100 AT4G38120.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0001080 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0001070 #N/A #N/A #N/A #N/A Ipc06G0001060 AT5G04885.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc06G0001050 AT5G20970.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc06G0001040 AT5G01270.2 carboxyl-terminal domain (ctd) phosphatase-like 2 Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses. carboxyl-terminal domain (ctd) phosphatase-like 2;(source:Araport11) Ipc06G0001030 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc06G0001020 AT2G27140.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc06G0001010 AT3G58510.3 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc06G0001000 AT3G20770.1 Ethylene insensitive 3 family protein Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores. Ethylene insensitive 3 family protein;(source:Araport11) Ipc06G0000990 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000980 AT3G44020.1 thylakoid lumenal P17.1 protein 0 thylakoid lumenal P17.1 protein;(source:Araport11) Ipc06G0000970 AT1G05055.1 general transcription factor II H2 Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD. general transcription factor II H2;(source:Araport11) Ipc06G0000960 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc06G0000950 AT2G24205.1 ECA1 gametogenesis related family protein Encodes a ECA1 gametogenesis related family protein ECA1 gametogenesis related family protein;(source:Araport11) Ipc04G0028720 AT4G16480.3 0 Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.The mRNA is cell-to-cell mobile. inositol transporter 4;(source:Araport11) Ipc04G0028710 AT3G12650.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0028700 AT5G26110.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0028690 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0028680 AT1G21730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0028670 AT1G32583.2 0 A microRNA MIR400 is derived from the first intron of At1g32583 in the 5 PrimeUTR. A stress-induced alternative splicing event in At1g32583 resulted in greater accumulation of miR400 primary transcripts and a low level of mature miR400. tapetum determinant protein;(source:Araport11) Ipc04G0028660 AT5G55630.2 Outward rectifying potassium channel protein Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins. Outward rectifying potassium channel protein;(source:Araport11) Ipc04G0028650 AT4G16400.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0028640 AT3G21680.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0028630 AT3G24130.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0028610 AT5G49400.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0028620 AT1G56670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0028600 AT4G16380.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0028590 AT5G50740.5 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0028580 AT1G79500.4 Aldolase-type TIM barrel family protein Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc04G0028570 AT2G02040.1 peptide transporter 2 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. peptide transporter 2;(source:Araport11) Ipc04G0028560 AT1G48285.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc04G0028550 AT3G44900.1 cation/H+ exchanger 4 member of Putative Na+/H+ antiporter family cation/H+ exchanger 4;(source:Araport11) Ipc04G0028540 AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc04G0028530 AT2G43560.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc04G0028520 AT5G47660.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0028510 AT1G05440.1 C-8 sterol isomerases 0 C-8 sterol isomerase;(source:Araport11) Ipc04G0028500 AT5G43250.1 nuclear factor Y, subunit C13 0 nuclear factor Y, subunit C13;(source:Araport11) Ipc04G0028490 AT5G47670.3 0 Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development. nuclear factor Y, subunit B6;(source:Araport11) Ipc04G0028480 AT5G47680.1 0 Encodes a protein involved in modification of nucleosides in tRNA. Mutants have 50% less 1-methylguanosine than wt counterparts. tRNA (guanine(9)-N1)-methyltransferase-like protein;(source:Araport11) Ipc04G0028470 AT1G12150.2 0 0 weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc04G0028460 AT4G23440.2 0 0 Disease resistance protein (TIR-NBS class);(source:Araport11) Ipc04G0028450 AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc04G0028440 AT5G47750.1 D6 protein kinase like 2 D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism. D6 protein kinase like 2;(source:Araport11) Ipc04G0028430 AT4G26590.1 oligopeptide transporter 5 oligopeptide transporter oligopeptide transporter 5;(source:Araport11) Ipc04G0028420 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0028410 AT5G55930.1 oligopeptide transporter 1 oligopeptide transporter oligopeptide transporter 1;(source:Araport11) Ipc04G0028400 AT1G03370.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc04G0028390 AT5G47800.4 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc04G0028380 AT1G54840.1 HSP20-like chaperones superfamily protein Encodes an atypical member of the sHSP20 family that is involved in histone demethylation. Loss of function mutations show increased methylation. IMD2 co-localizes to the nucleus with, and physically interacts with, IMD1, a protein involved in RNA directed DNA methylation. IMD2 contains an alpha crystallin domain , that is required for its function. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0028370 AT4G26570.1 calcineurin B-like 3 member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) calcineurin B-like 3;(source:Araport11) Ipc04G0028360 AT4G17180.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc04G0028350 AT4G13640.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0028340 AT4G31880.1 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. transcriptional regulator;(source:Araport11) Ipc04G0028330 AT3G17800.1 Protein of unknown function (DUF760) mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem alanine-tRNA ligase, putative (DUF760);(source:Araport11) Ipc04G0028320 AT1G49850.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0028310 AT4G31890.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0028300 AT1G15880.1 golgi snare 11 Golgi SNARE 11 protein (GOS11) golgi snare 11;(source:Araport11) Ipc04G0028290 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0028280 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0028270 AT5G11000.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc04G0028260 AT5G25190.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0028250 AT3G04980.3 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0028240 AT1G08845.3 0 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc04G0028230 AT3G06340.4 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0028220 AT2G25220.5 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0028210 AT2G25220.6 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0028200 AT1G60990.3 Glycine cleavage T-protein family Encodes a chloroplast-localized COG0354 protein that requires folate for its function in Fe/S cluster biogenesis. Glycine cleavage T-protein family;(source:Araport11) Ipc04G0028190 AT4G02040.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0028180 AT4G32030.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0028170 AT1G23450.1 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide (PPR) repeat-containing protein PPR superfamily protein;(source:Araport11) Ipc04G0028160 AT5G11070.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0028150 AT5G23740.1 ribosomal protein S11-beta Encodes a putative ribosomal protein S11 (RPS11-beta). ribosomal protein S11-beta;(source:Araport11) Ipc04G0028140 AT2G12400.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc04G0028130 AT5G11090.1 serine-rich protein-related 0 serine-rich protein-like protein;(source:Araport11) Ipc04G0028120 AT5G10210.1 0 0 nitric oxide synthase-interacting protein;(source:Araport11) Ipc04G0028110 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc04G0028100 AT2G25280.1 0 0 AmmeMemoRadiSam system protein B;(source:Araport11) Ipc04G0028090 AT1G80490.1 TOPLESS-related 1 0 TOPLESS-related 1;(source:Araport11) Ipc04G0028080 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0028070 AT3G24130.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0028060 AT2G25310.1 Protein of unknown function (DUF2012) 0 ER membrane protein complex subunit-like protein (DUF2012);(source:Araport11) Ipc04G0028050 AT3G62060.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0028040 AT4G32140.1 EamA-like transporter family 0 EamA-like transporter family;(source:Araport11) Ipc04G0028030 AT1G05500.1 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc04G0028020 AT1G79000.3 0 Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. histone acetyltransferase of the CBP family 1;(source:Araport11) Ipc04G0028010 AT4G28680.2 L-tyrosine decarboxylase Encodes a stress-induced tyrosine decarboxylase (TyrDC). Recombinant (His)6-TyrDC expressed in E. coli catalyzes the conversion of L-tyrosine to tyramine. Recombinant TyrDC forms tetramers. L-tyrosine decarboxylase;(source:Araport11) Ipc04G0028000 AT2G25810.1 tonoplast intrinsic protein 4;1 0 tonoplast intrinsic protein 4;(source:Araport11) Ipc04G0027990 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0027980 AT5G45420.3 0 The gene encodes a MYB transcription factor belons to R2R3-MYB family of transcription factors. Knock-down mutant analysis indicates its role in root hair elongation. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc04G0027970 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0027960 AT5G25310.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc04G0027950 AT5G11150.2 0 Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. vesicle-associated membrane protein 713;(source:Araport11) Ipc04G0027940 AT5G11160.1 adenine phosphoribosyltransferase 5 0 adenine phosphoribosyltransferase 5;(source:Araport11) Ipc04G0027930 AT4G32250.3 Protein kinase superfamily protein Encodes a component of the TOC machinery that phosphorylates import receptors, supports pre-protein import, and contributes to efficient chloroplast biogenesis. Protein kinase superfamily protein;(source:Araport11) Ipc04G0027920 AT1G56140.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0027910 AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0027900 AT4G32270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc04G0027890 AT1G56140.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0027880 AT2G30630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0027870 AT4G32330.4 0 WDL5 is an target of EIN3 that co-localizes with cortical microtubles. It its thought to function to stabilize microtubles during ethylene induced hypocotyl elongation. TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc04G0027860 AT1G80133.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc04G0027850 AT3G48560.1 chlorsulfuron/imidazolinone resistant 1 Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1;(source:Araport11) Ipc04G0027840 AT2G25490.1 EIN3-binding F box protein 1 Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile. EIN3-binding F box protein 1;(source:Araport11) Ipc04G0027830 AT5G55800.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc04G0027820 AT3G10220.1 tubulin folding cofactor B Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. The mRNA is cell-to-cell mobile. tubulin folding cofactor B;(source:Araport11) Ipc04G0027810 AT1G48090.5 0 0 calcium-dependent lipid-binding family protein;(source:Araport11) Ipc04G0027800 AT5G25360.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0027790 AT5G16080.1 carboxyesterase 17 0 carboxyesterase 17;(source:Araport11) Ipc04G0027780 AT3G24080.4 0 0 KRR1 family protein;(source:Araport11) Ipc04G0027770 AT1G68620.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0027760 AT2G26690.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0027750 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc04G0027740 AT2G34160.1 Alba DNA/RNA-binding protein 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc04G0027730 AT5G11260.1 Basic-leucine zipper (bZIP) transcription factor family protein Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene's promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc04G0027720 AT1G03360.1 ribosomal RNA processing 4 Encodes a core subunit of the RNA exosome required for the processing of rRNA, several snoRNA and the degradation of aberrant transcripts. ribosomal RNA processing 4;(source:Araport11) Ipc04G0027710 AT1G66170.1 RING/FYVE/PHD zinc finger superfamily protein Encodes a PHD-domain containing protein required for male meiosis. Gene is expressed in developing male meiocytes and protein is localized to nuclear euchromatin specifically during diplotene. Required to regulate microtubule organization and cell cycle transitions during male meiosis, and functions as a direct transcription activator of the meiotic gene TDM1. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0027700 AT3G06260.1 galacturonosyltransferase-like 4 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 4;(source:Araport11) Ipc04G0027690 AT2G48075.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0027680 AT3G53840.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0027670 AT5G11270.1 overexpressor of cationic peroxidase 3 Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. Also involved in drought tolerance. overexpressor of cationic peroxidase 3;(source:Araport11) Ipc04G0027660 AT5G11280.1 0 0 tail fiber;(source:Araport11) Ipc04G0027650 AT2G26280.3 0 smr (Small MutS Related) domain-containing protein CTC-interacting domain 7;(source:Araport11) Ipc04G0027640 AT1G72510.2 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc04G0027630 AT4G33180.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0027620 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc04G0027610 AT2G26300.2 0 Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.The mRNA is cell-to-cell mobile. G protein alpha subunit 1;(source:Araport11) Ipc04G0027600 AT2G26310.5 0 Encodes a plastid stroma localized fatty acid binding protein. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc04G0027590 AT5G21940.1 0 0 hybrid signal transduction histidine kinase M-like protein;(source:Araport11) Ipc04G0027580 AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein 0 RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11) Ipc04G0027570 AT2G06040.1 0 Contributes to UV tolerance through nucleotide excision repair. F-box/LRR protein;(source:Araport11) Ipc04G0027560 AT5G21482.1 cytokinin oxidase 7 This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 7;(source:Araport11) Ipc04G0027550 AT5G21430.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0027540 AT2G06520.1 photosystem II subunit X Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX. photosystem II subunit X;(source:Araport11) Ipc04G0027530 AT5G12080.3 mechanosensitive channel of small conductance-like 10 Encodes a mechanosensitive (or stretch-activated) ion channel in the plasma membrane with a moderate preference for anions.Cell death activity is negatively regulated by phosphorylation while mechanosensitive properties are unaffected. mechanosensitive channel of small conductance-like 10;(source:Araport11) Ipc04G0027520 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc04G0027510 AT4G12070.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0027500 AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0027480 AT1G72830.1 nuclear factor Y, subunit A3 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Expression is upregulated in the shoot of cax1/cax3 mutant. nuclear factor Y, subunit A3;(source:Araport11) Ipc04G0027420 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027470 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027460 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027450 AT5G12030.1 heat shock protein 17.6A Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. heat shock protein 17.6A;(source:Araport11) Ipc04G0027440 AT5G12030.1 heat shock protein 17.6A Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. heat shock protein 17.6A;(source:Araport11) Ipc04G0027490 AT1G72830.1 nuclear factor Y, subunit A3 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Expression is upregulated in the shoot of cax1/cax3 mutant. nuclear factor Y, subunit A3;(source:Araport11) Ipc04G0027430 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027410 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027400 AT5G51160.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0027390 AT5G12030.1 heat shock protein 17.6A Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. heat shock protein 17.6A;(source:Araport11) Ipc04G0027380 AT5G12030.1 heat shock protein 17.6A Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. heat shock protein 17.6A;(source:Araport11) Ipc04G0027370 AT5G12020.1 17.6 kDa class II heat shock protein 0 17.6 kDa class II heat shock protein;(source:Araport11) Ipc04G0027360 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc04G0027350 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc04G0027340 AT5G26170.1 WRKY DNA-binding protein 50 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 50;(source:Araport11) Ipc04G0027330 AT5G12010.1 0 0 nuclease;(source:Araport11) Ipc04G0027320 AT5G11980.1 conserved oligomeric Golgi complex component-related / COG complex component-related COG8 is a component of a putative conserved oligomeric Golgi (COG) complex that is thought to be involved in tethering of retrograde intra Golgi vesicles. It is required for proper deposition of cell wall materials in pollen tube growth. In mutant pollen,golgi appear abnormal.When homozygotes can be produced (by complementing the defect in pollen), the plants are embryo lethal suggesting an essential function. COG8 interacts with several other putative COG components. conserved oligomeric Golgi complex component-related / COG complex component-like protein;(source:Araport11) Ipc04G0027310 AT3G13920.1 eukaryotic translation initiation factor 4A1 eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1;(source:Araport11) Ipc04G0027300 AT4G10250.1 HSP20-like chaperones superfamily protein Columbia endomembrane-localized small heat shock protein HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0027280 AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0027290 AT5G61220.3 0 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc04G0027270 AT5G11960.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc04G0027260 AT5G11950.3 0 Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At2G37210. Putative lysine decarboxylase family protein;(source:Araport11) Ipc04G0027250 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc04G0027240 AT3G14760.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0027220 AT2G29070.1 Ubiquitin fusion degradation UFD1 family protein 0 Ubiquitin fusion degradation UFD1 family protein;(source:Araport11) Ipc04G0027230 AT4G08450.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc04G0027210 AT2G26150.4 0 member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2;(source:Araport11) Ipc04G0027200 AT4G30380.2 0 Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. Barwin-related endoglucanase;(source:Araport11) Ipc04G0027190 AT2G26140.1 FTSH protease 4 Encodes an FtsH protease that is localized to the mitochondrion. Loss of function results in increased determinacy of the meristem that is exacerbated when plants are grown at higher temperatures. FTSH protease 4;(source:Araport11) Ipc04G0027180 AT5G50900.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0027170 AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc04G0027160 AT1G12840.1 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3);(source:Araport11) Ipc04G0027150 AT5G50915.4 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0027140 AT5G54310.1 ARF-GAP domain 5 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation. ARF-GAP domain 5;(source:Araport11) Ipc04G0027130 AT3G13677.3 0 0 hypothetical protein;(source:Araport11) Ipc04G0027120 AT2G20820.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0027110 AT4G21570.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc04G0027100 AT3G13682.1 LSD1-like2 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA. LSD1-like2;(source:Araport11) Ipc04G0027090 AT5G54370.1 Late embryogenesis abundant (LEA) protein-related 0 Late embryogenesis abundant (LEA) protein-like protein;(source:Araport11) Ipc04G0027080 AT3G15534.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0027070 AT5G54400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0027060 AT1G60280.1 NAC domain containing protein 23 0 NAC domain containing protein 23;(source:Araport11) Ipc04G0027050 AT5G54440.1 CLUB Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis. Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. CLUB;(source:Araport11) Ipc04G0027040 AT1G52870.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc04G0027030 AT3G15510.1 NAC domain containing protein 2 Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2. NAC domain containing protein 2;(source:Araport11) Ipc04G0027020 AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc04G0027010 AT4G27430.2 COP1-interacting protein 7 Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression. The mRNA is cell-to-cell mobile. COP1-interacting protein 7;(source:Araport11) Ipc04G0027000 AT3G15480.1 Protein of unknown function (DUF1218) 0 fiber (DUF1218);(source:Araport11) Ipc04G0026990 AT2G20880.1 Integrase-type DNA-binding superfamily protein Encodes ERF53, a drought-induced transcription factor. Belongs to the AP2/ERF superfamily, and has a highly conserved AP2 domain. Regulates drought-responsive gene expressions by binding to the GCC box and/or dehydration-responsive element (DRE) in the promoter of downstream genes. Overexpression of AtERF53 driven by the CaMV35S promoter resulted in an unstable drought-tolerant phenotype in T2 transgenic plants. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0026980 AT1G52920.1 G protein coupled receptor Encodes a plasma membrane–localized ABA receptor, which interacts with the Gαβγ complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into Gα and the Gβγ dimer to activate downstream ABA effectors and to trigger the ABA responses. G protein coupled receptor;(source:Araport11) Ipc04G0026970 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0026960 AT3G15460.1 Ribosomal RNA processing Brix domain protein Encodes one of two Arabidopsis orthologs of yeast BRX1, a protein involved in maturation of the large ribosomal subunit. The proteins are mainly localized in nucleolus. Mutant plants are affected in pre-rRNA processing. Ribosomal RNA processing Brix domain protein;(source:Araport11) Ipc04G0026950 AT5G53750.1 CBS domain-containing protein 0 CBS domain-containing protein;(source:Araport11) Ipc04G0026940 AT3G15430.6 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc04G0026930 AT3G15420.1 Transcription factor TFIIIC, tau55-related protein 0 Transcription factor TFIIIC, tau55-related protein;(source:Araport11) Ipc04G0026920 AT3G15410.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0026910 AT1G19640.1 jasmonic acid carboxyl methyltransferase Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. jasmonic acid carboxyl methyltransferase;(source:Araport11) Ipc04G0026900 AT5G04370.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid to yield methyl nicotinate. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0026890 AT3G15380.1 Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport, localizes to the trans-Golgi network, and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile, defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein;(source:Araport11) Ipc04G0026880 AT1G36980.2 0 0 transmembrane 50A-like protein;(source:Araport11) Ipc04G0026870 AT5G53800.1 0 0 nucleic acid-binding protein;(source:Araport11) Ipc04G0026860 AT3G15360.1 thioredoxin M-type 4 encodes a prokaryotic thioredoxin The mRNA is cell-to-cell mobile. thioredoxin M-type 4;(source:Araport11) Ipc04G0026850 #N/A #N/A #N/A #N/A Ipc04G0026840 AT1G53035.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0026830 AT1G53050.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0026820 AT3G15354.3 0 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. SPA1-related 3;(source:Araport11) Ipc04G0026810 AT3G15350.2 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc04G0026800 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0026790 AT4G27500.2 0 interacts with H+-ATPase, and regulates its activityThe mRNA is cell-to-cell mobile. proton pump interactor 1;(source:Araport11) Ipc04G0026780 AT1G53120.1 RNA-binding S4 domain-containing protein 0 RNA-binding S4 domain-containing protein;(source:Araport11) Ipc04G0026770 AT1G53130.1 Stigma-specific Stig1 family protein Encodes GRIM REAPER (GRI), involved in the regulation of cell death induced by extracellular ROS (reactive oxygen species). Secreted into the extracellular space. Stigma-specific Stig1 family protein;(source:Araport11) Ipc04G0026760 AT1G53140.1 Dynamin related protein 5A Encodes DRP5A, a dynamin protein involved in cytokinesis in Arabidopsis. Dynamin related protein 5A;(source:Araport11) Ipc04G0026750 AT1G28280.2 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc04G0026740 AT1G24650.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0026730 AT5G53860.2 embryo defective 2737 Encodes a plant-specific protein with a domain similar to the central cysteine-rich domain of DnaJ proteins. It is involved in chloroplast and leaf development. This is the predominant isoform of the protein. embryo defective 2737;(source:Araport11) Ipc04G0026720 AT5G53870.1 early nodulin-like protein 1 0 early nodulin-like protein 1;(source:Araport11) Ipc04G0026710 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0026700 AT3G23560.1 MATE efflux family protein Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds. MATE efflux family protein;(source:Araport11) Ipc04G0026690 #N/A #N/A #N/A #N/A Ipc04G0026680 AT4G33390.1 Plant protein of unknown function (DUF827) 0 WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827);(source:Araport11) Ipc04G0026670 AT1G75820.1 Leucine-rich receptor-like protein kinase family protein Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0026660 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc04G0026650 AT5G53890.1 phytosylfokine-alpha receptor 2 Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation. phytosylfokine-alpha receptor 2;(source:Araport11) Ipc04G0026640 AT3G15220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0026630 AT4G27540.1 prenylated RAB acceptor 1.H 0 prenylated RAB acceptor 1.H;(source:Araport11) Ipc04G0026620 AT5G53940.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc04G0026610 AT5G53940.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc04G0026600 AT3G15850.1 fatty acid desaturase 5 Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. The mRNA is cell-to-cell mobile. fatty acid desaturase 5;(source:Araport11) Ipc04G0026590 AT1G06080.2 0 Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. It is involved in the desaturation of VLCFAs to make monounsaturated VLCFAs. delta 9 desaturase 1;(source:Araport11) Ipc04G0026580 AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein 0 Vacuolar protein sorting 55 (VPS55) family protein;(source:Araport11) Ipc04G0026570 AT3G15850.1 fatty acid desaturase 5 Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. The mRNA is cell-to-cell mobile. fatty acid desaturase 5;(source:Araport11) Ipc04G0026560 AT5G48360.1 Actin-binding FH2 (formin homology 2) family protein 0 Actin-binding FH2 (formin homology 2) family protein;(source:Araport11) Ipc04G0026550 AT3G15850.1 fatty acid desaturase 5 Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. The mRNA is cell-to-cell mobile. fatty acid desaturase 5;(source:Araport11) Ipc04G0026540 AT2G33845.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0026530 AT5G53980.1 homeobox protein 52 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 52;(source:Araport11) Ipc04G0026520 AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein ERI (At3g15140) encodes a protein of 337 amino acids of the ribonuclease H-like superfamily. The protein contains both DEDDh and SAP domains.The first exon contains a TCT-microsatellite structure (starting 226 bp after ATG) that, based on sequence complementarity, is a miR5021-cleavage target site. ERI is predicted to function as an siRNA exonuclease. Overexpression leads to increased post transcriptional gene silencing and reduced numbers of 21mers. Macroscopically, the growth rate is increased in overexpressors leading to increased biomass. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0026510 AT3G15115.1 0 0 serine/arginine repetitive matrix protein;(source:Araport11) Ipc04G0026500 AT3G15110.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0026490 AT5G46060.1 Protein of unknown function, DUF599 0 spastin, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc04G0026480 AT1G77290.3 0 0 Glutathione S-transferase family protein;(source:Araport11) Ipc04G0026470 AT3G18380.1 sequence-specific DNA binding transcription factors;sequence-specific DNA binding 0 DNA-BINDING TRANSCRIPTION FACTOR 2;(source:Araport11) Ipc04G0026460 AT1G53190.2 RING/U-box superfamily protein Encodes a RING-type E3 ligase that positively regulates CIN-like TCP activity to promote leaf development by mediating the degradation of the TCP repressor TIE1. RING/U-box superfamily protein;(source:Araport11) Ipc04G0026450 AT2G34040.3 0 0 Apoptosis inhibitory protein 5 (API5);(source:Araport11) Ipc04G0026440 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc04G0026430 AT3G28560.1 BCS1 AAA-type ATPase 0 BCS1 AAA-type ATPase;(source:Araport11) Ipc04G0026420 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc04G0026410 #N/A #N/A #N/A #N/A Ipc04G0026400 AT2G34010.2 0 0 verprolin;(source:Araport11) Ipc04G0026390 AT3G15050.1 IQ-domain 10 0 IQ-domain 10;(source:Araport11) Ipc04G0026380 AT3G15030.4 0 Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. TCP family transcription factor 4;(source:Araport11) Ipc04G0026370 AT5G20740.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0026360 AT1G53240.1 Lactate/malate dehydrogenase family protein mMDH1 encodes a mitochrondrial malate dehydrogenase. It is expressed at higher levels than the other mitochrondrial isoform mMDH2 (At3G15020) according to transcript and proteomic analyses. Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc04G0026350 AT1G73140.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).The dwarf phenotype can only be seen in tbl3 tbl31 esk1 triple mutant. tbl3 and tbl31 are specifically involved in 3-O-monoacetylation of xylan. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc04G0026340 AT2G41060.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0026330 AT1G53250.1 0 0 histone-lysine N-methyltransferase, H3 lysine-79 specific-like protein;(source:Araport11) Ipc04G0026320 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc04G0026310 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc04G0026300 AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile. tetratricopetide-repeat thioredoxin-like 1;(source:Araport11) Ipc04G0026290 AT1G78870.2 ubiquitin-conjugating enzyme 35 UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. The mRNA is cell-to-cell mobile. ubiquitin-conjugating enzyme 35;(source:Araport11) Ipc04G0026280 AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc04G0026270 AT1G53310.3 phosphoenolpyruvate carboxylase 1 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.Plays an important role in carbon and nitrogen metabolism. phosphoenolpyruvate carboxylase 1;(source:Araport11) Ipc04G0026260 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc04G0026250 AT3G14900.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0026240 AT3G14890.1 phosphoesterase Encodes a base excision repair protein that, together with APE2, it plays overlapping roles in the maintenance of epigenome and genome stability in plants. phosphoesterase;(source:Araport11) Ipc04G0026230 AT5G57090.1 Auxin efflux carrier family protein Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation results in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Membrane sterol composition is essential for the acquisition of PIN2 polarity. Its expression is downregulated at hypoxic conditions. RAP2.12 overexpression inhibits this downregulation. Auxin efflux carrier family protein;(source:Araport11) Ipc04G0026220 AT1G78810.3 0 0 hypothetical protein;(source:Araport11) Ipc04G0026210 AT1G53320.1 tubby like protein 7 Member of plant TLP family. TLP7 is tethered to the PM but detaches upon stimulus and translocates to the nucleus. Has DNA binding activity but lacks conservation of the transcription activation domain. tubby like protein 7;(source:Araport11) Ipc04G0026200 AT1G16950.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0026190 AT1G53380.5 0 0 hypothetical protein (DUF641);(source:Araport11) Ipc04G0026180 AT1G29310.2 0 0 SecY protein transport family protein;(source:Araport11) Ipc04G0026170 AT3G14860.1 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc04G0026160 AT1G53400.1 Ubiquitin domain-containing protein 0 Ubiquitin domain-containing protein;(source:Araport11) Ipc04G0026150 AT1G78650.1 DNA-directed DNA polymerases Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication. DNA-directed DNA polymerase;(source:Araport11) Ipc04G0026140 AT3G14830.4 0 0 epstein-barr nuclear antigen;(source:Araport11) Ipc04G0026130 AT1G78630.1 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc04G0026120 AT1G78620.1 Protein of unknown function DUF92, transmembrane 0 integral membrane protein (Protein of unknown function DUF92, transmembrane);(source:Araport11) Ipc04G0026110 AT1G78570.1 rhamnose biosynthesis 1 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. rhamnose biosynthesis 1;(source:Araport11) Ipc04G0026100 AT3G14750.1 0 0 structural maintenance of chromosomes domain protein;(source:Araport11) Ipc04G0026090 AT3G14740.2 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0026080 AT1G78540.1 SH2 domain protein B Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor. SH2 domain protein B;(source:Araport11) Ipc04G0026070 AT1G78530.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0026060 AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc04G0026050 AT1G17050.1 solanesyl diphosphate synthase 2 Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids. solanesyl diphosphate synthase 2;(source:Araport11) Ipc04G0026040 AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein Mitochondrial ATP-independent protease Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc04G0026030 AT1G53580.1 glyoxalase II 3 Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site. glyoxalase II 3;(source:Araport11) Ipc04G0026020 AT3G14570.1 glucan synthase-like 4 encodes a protein similar to callose synthase glucan synthase-like 4;(source:Araport11) Ipc04G0026010 AT1G53600.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0026000 AT4G01330.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0025990 AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein 0 RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11) Ipc04G0025980 AT3G46920.2 0 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc04G0025970 AT1G17100.1 SOUL heme-binding family protein 0 SOUL heme-binding family protein;(source:Araport11) Ipc04G0025960 AT1G78440.1 Arabidopsis thaliana gibberellin 2-oxidase 1 Encodes a gibberellin 2-oxidase that acts on C19 gibberellins. gibberellin 2-beta-dioxygenase;(source:Araport11) Ipc04G0025950 AT3G18905.1 0 0 F-box/associated interaction domain protein;(source:Araport11) Ipc04G0025940 #N/A #N/A #N/A #N/A Ipc04G0025930 AT1G17147.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc04G0025920 AT3G14450.1 CTC-interacting domain 9 RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain. CTC-interacting domain 9;(source:Araport11) Ipc04G0025910 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc04G0025900 AT2G15270.2 0 0 PRKR-interacting protein;(source:Araport11) Ipc04G0025890 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc04G0025880 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc04G0025870 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc04G0025860 AT3G14440.1 nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. nine-cis-epoxycarotenoid dioxygenase 3;(source:Araport11) Ipc04G0025850 AT3G14420.2 Aldolase-type TIM barrel family protein Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. The mRNA is cell-to-cell mobile. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc04G0025840 AT3G14410.1 Nucleotide/sugar transporter family protein Nucleotide/sugar transporter family protein Nucleotide/sugar transporter family protein;(source:Araport11) Ipc04G0025830 AT3G50440.1 methyl esterase 10 Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro. methylesterase;(source:Araport11) Ipc04G0025820 AT1G63130.2 0 Transacting siRNA generating locus. Its derived siR9as targets AT1G62930 for cleavage. Itself is targeted by TAS2-derived ta-siR2140 for cleavage. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0025810 AT1G62670.2 0 Encodes a pentatricopeptide repeat protein required for 5 Prime end processing of nad9 and cox3 mRNAs in mitochondria. rna processing factor 2;(source:Araport11) Ipc04G0025800 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025790 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025780 AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0025770 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025760 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025750 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025740 AT3G58660.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc04G0025730 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025720 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025710 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc04G0025700 AT3G05130.1 0 0 paramyosin-like protein;(source:Araport11) Ipc04G0025690 AT1G17230.2 0 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0025680 AT2G41460.2 apurinic endonuclease-redox protein Apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair. apurinic endonuclease-redox protein;(source:Araport11) Ipc04G0025670 AT1G72250.3 0 0 Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11) Ipc04G0025660 AT1G17210.1 IAP-like protein 1 0 IAP-like protein 1;(source:Araport11) Ipc04G0025650 AT1G17200.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0025640 AT3G49670.1 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0025630 AT2G33180.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0025620 AT1G61520.3 photosystem I light harvesting complex gene 3 PSI type III chlorophyll a/b-binding protein (Lhca3*1) The mRNA is cell-to-cell mobile. PSI type III chlorophyll a/b-binding protein;(source:Araport11) Ipc04G0025610 AT5G34870.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0025600 AT4G12650.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc04G0025590 AT5G48310.2 0 Protein of unknown function that may be involved in stress response. Strongly expressed in vascular tissues.Mutants are ABA- insensitive. portal protein;(source:Araport11) Ipc04G0025580 AT4G12640.1 RNA recognition motif (RRM)-containing protein Encodes a member of the Split ends (Spen) protein family that is characterized by an N-terminal domain, with one or more RNA recognition motifs and a SPOC domain. Knockout and overexpression mutants show no apparent changes in growth, development and flowering time under standard growth conditions. RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc04G0025570 #N/A #N/A #N/A #N/A Ipc04G0025560 AT1G55730.2 cation exchanger 5 member of Low affinity calcium antiporter CAX2 family cation exchanger 5;(source:Araport11) Ipc04G0025550 AT4G17170.1 RAB GTPase homolog B1C member of RAB gene family RAB GTPase homolog B1C;(source:Araport11) Ipc04G0025540 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0025530 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0025520 AT2G46170.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc04G0025510 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0025500 AT2G42975.1 0 0 myosin-G heavy chain-like protein;(source:Araport11) Ipc04G0025490 AT5G50890.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0025480 AT4G37710.2 0 0 VQ motif-containing protein;(source:Araport11) Ipc04G0025470 AT5G52740.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc04G0025460 AT3G59110.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0025450 AT1G78400.1 Pectin lyase-like superfamily protein PGX2 is a cell wall protein that codes for a polygalacturonase. Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0025440 AT2G42940.1 Predicted AT-hook DNA-binding family protein Encodes a nuclear matrix protein with AT-hook DNA binding motifs that acts in the maintenance of genomic integrity by silencing TEs and repeat-containing genes through epigenetic machinery. It interacts with FVE and MSI5 which are components of HDAC corepressor complexes. It is expressed in tapetum during the tetrad stage. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc04G0025430 AT2G42920.2 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0025420 AT2G42900.1 Plant basic secretory protein (BSP) family protein 0 Plant basic secretory protein (BSP) family protein;(source:Araport11) Ipc04G0025410 AT1G06520.1 glycerol-3-phosphate acyltransferase 1 sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile. glycerol-3-phosphate acyltransferase 1;(source:Araport11) Ipc04G0025400 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0025390 AT2G42880.1 MAP kinase 20 member of MAP Kinase MAP kinase 20;(source:Araport11) Ipc04G0025380 AT1G06530.1 Tropomyosin-related Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis. Tropomyosin-like protein;(source:Araport11) Ipc04G0025360 AT2G42840.1 protodermal factor 1 Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia. protodermal factor 1;(source:Araport11) Ipc04G0025350 #N/A #N/A #N/A #N/A Ipc04G0025340 AT2G24300.3 0 0 Calmodulin-binding protein;(source:Araport11) Ipc04G0025330 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc04G0025320 AT1G17210.1 IAP-like protein 1 0 IAP-like protein 1;(source:Araport11) Ipc04G0025310 AT2G38410.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc04G0025300 AT3G58840.2 Tropomyosin-related Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR1. Involved in the morphogenesis and proliferation of peroxisomes and mitochondria. Tropomyosin-like protein;(source:Araport11) Ipc04G0025290 AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 24 encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response. xyloglucan endotransglucosylase/hydrolase 24;(source:Araport11) Ipc04G0025280 AT1G06530.1 Tropomyosin-related Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis. Tropomyosin-like protein;(source:Araport11) Ipc04G0025270 AT3G58830.2 0 Encodes a phosphatidylglycerophosphate (PGP) phosphatase that localizes to chloroplasts in above ground plant parts and mitochondria in root tips and root hairs and is involved in the synthesis of plastidial Phosphatidylglycerol (PG). This enzyme is responsible for the second step of PG synthesis. Mutants show reduced root growth. haloacid dehalogenase (HAD) superfamily protein;(source:Araport11) Ipc04G0025260 AT2G42840.1 protodermal factor 1 Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia. protodermal factor 1;(source:Araport11) Ipc04G0025370 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc04G0025250 AT2G42810.3 0 Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. It also regulates tetrapyrrole biosynthesis through the accumulation of Mg-ProtoIX and acts as a negative regulator of photosynthesis associated nuclear gene expression during chloroplast biogenesis and development. protein phosphatase 5.2;(source:Araport11) Ipc04G0025240 AT3G58750.1 citrate synthase 2 Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. citrate synthase 2;(source:Araport11) Ipc04G0025230 AT2G42780.2 0 0 transcription elongation factor B polypeptide;(source:Araport11) Ipc04G0025220 AT3G25660.1 Amidase family protein 0 Amidase family protein;(source:Araport11) Ipc04G0025210 AT1G08750.3 Peptidase C13 family GPI8/PIG-K homolog involved in stomata development. Loss of function alleles do not transmit through the pollen. Peptidase C13 family;(source:Araport11) Ipc04G0025200 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc04G0025190 AT3G22960.1 Pyruvate kinase family protein encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mRNA is cell-to-cell mobile. Pyruvate kinase family protein;(source:Araport11) Ipc04G0025180 AT1G50020.1 0 0 tubulin alpha-6 chain;(source:Araport11) Ipc04G0025170 AT1G58360.1 amino acid permease 1 Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos. The transporter also functions in acquisition of glutamate and neutral amino acids by the root. amino acid permease 1;(source:Araport11) Ipc04G0025160 AT1G10010.1 amino acid permease 8 Encodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity. amino acid permease 8;(source:Araport11) Ipc04G0025150 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc04G0025140 AT1G10010.1 amino acid permease 8 Encodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity. amino acid permease 8;(source:Araport11) Ipc04G0025130 AT1G17870.1 ethylene-dependent gravitropism-deficient and yellow-green-like 3 S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442–454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171–179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria. ethylene-dependent gravitropism-deficient and yellow-green-like 3;(source:Araport11) Ipc04G0025120 AT2G22860.1 phytosulfokine 2 precursor Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor. The mRNA is cell-to-cell mobile. phytosulfokine 2 precursor;(source:Araport11) Ipc04G0025110 AT3G14940.2 0 Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.The mRNA is cell-to-cell mobile. phosphoenolpyruvate carboxylase 3;(source:Araport11) Ipc04G0025100 AT3G19640.1 magnesium transporter 4 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 4;(source:Araport11) Ipc04G0025090 AT3G49845.1 0 0 cysteine-rich TM module stress tolerance protein;(source:Araport11) Ipc04G0025080 AT1G49950.3 telomere repeat binding factor 1 Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.Mutations in TRB1 and TRB3 enhance the lhp1 mutant phenotype. Triple mutants are more strongly affected than the respective double mutants with lhp1. TRB1 binds non-H3K27me3 target genes predominantly at the transcription start sites and its presence increases the expression of several of these targets, enriched for functions of primary metabolism. At H3K27me3 target genes, TRB1 binding is more distributed across gene bodies and at extended promoter regions, corresponding to an enrichment of putative binding sites "RMCCTAR". At these genes, TRB1 particiaptes in the repression because several direct targets are further upregulated in trb1 lhp1 double mutants as compared to lhp1 mutants. telomere repeat binding factor 1;(source:Araport11) Ipc04G0025070 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc04G0025060 AT3G19650.1 cyclin-related 0 cyclin-like protein;(source:Araport11) Ipc04G0025050 AT5G17910.3 0 0 cardiomyopathy-associated protein;(source:Araport11) Ipc04G0025040 AT2G14835.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0025030 AT3G19590.1 Transducin/WD40 repeat-like superfamily protein Encodes a protein that may have a role in the spindle assembly checkpoint. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0025020 AT1G49970.1 CLP protease proteolytic subunit 1 Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease proteolytic subunit 1;(source:Araport11) Ipc04G0025010 AT5G17880.2 0 Encodes a TIR-NBS-LRR protein CSA1 that functions in photomorphogenic development. csa1 mutants display a constitutive shade-avoidance (CSA) phenotype (long stem) under high red:far-red rations (i.e. in the absence of a shade signal). csa1 mutation can be complemented by RPS4, a TIR-NBS-LRR protein that confers resistance against bacterium Pseudomonas syringae. disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc04G0025000 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0024990 AT4G18050.1 P-glycoprotein 9 0 P-glycoprotein 9;(source:Araport11) Ipc04G0024980 AT2G14820.2 0 A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc04G0024970 AT3G49940.1 LOB domain-containing protein 38 0 LOB domain-containing protein 38;(source:Araport11) Ipc04G0024960 AT1G49880.1 Erv1/Alr family protein Encodes Erv1, a component of the mitochondrial intermembrane space assembly machinery involved in the import pathway of the small intermembrane space proteins. It contains a Cys-X-Cys shuttle disulfide and oxidizes thioredoxin in vitro. Erv1/Alr family protein;(source:Araport11) Ipc04G0024950 AT3G19550.1 0 0 glutamate racemase;(source:Araport11) Ipc04G0024940 AT1G49850.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0024930 AT5G61330.3 0 0 rRNA processing protein-like protein;(source:Araport11) Ipc04G0024920 AT5G59845.1 Gibberellin-regulated family protein Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall. Gibberellin-regulated family protein;(source:Araport11) Ipc04G0024910 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc04G0024900 AT4G34270.1 TIP41-like family protein TOR signaling pathway protein. TIP41-like family protein;(source:Araport11) Ipc04G0024890 AT5G44750.1 DNA-directed DNA polymerases Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). DNA-directed DNA polymerase;(source:Araport11) Ipc04G0024880 AT2G15230.1 lipase 1 Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular. lipase 1;(source:Araport11) Ipc04G0024870 AT3G19440.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc04G0024860 AT4G34200.1 D-3-phosphoglycerate dehydrogenase Encodes a 3-phosphoglycerate dehydrogenase that is essential for embryo and pollen development. D-3-phosphoglycerate dehydrogenase;(source:Araport11) Ipc04G0024850 AT3G19490.1 sodium:hydrogen antiporter 1 member of Na+/H+ antiporter-Putative family sodium:hydrogen antiporter 1;(source:Araport11) Ipc04G0024840 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc04G0024830 AT3G19420.1 PTEN 2 Encodes a phosphatase with low in vitro tyrosine phosphatase activity that is capable of dephosphorylating in vitro the 3'phosphate group of PI3P, PI(3,4)P2, and PI(3,5)P2 and may be an effector of lipid signaling. The mRNA is cell-to-cell mobile. PTEN 2;(source:Araport11) Ipc04G0024820 AT1G47128.1 Granulin repeat cysteine protease family protein cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc04G0024810 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc04G0024800 AT1G66100.1 Plant thionin Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. Plant thionin;(source:Araport11) Ipc04G0024790 AT4G34120.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system. The mRNA is cell-to-cell mobile. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc04G0024780 AT1G49760.2 poly(A) binding protein 8 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. poly(A) binding protein 8;(source:Araport11) Ipc04G0024770 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc04G0024760 AT4G34050.3 0 Methyltransferase in the lignin biosynthetic pathway. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0024750 AT3G55350.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) Ipc04G0024740 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc04G0024730 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc04G0024720 AT2G15530.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0024710 AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to desiccation due to the abnormal cuticle. Together with ICE1, ZOU determines primary seed dormancy depth independently of their joint role in endosperm development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0024700 AT3G19310.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc04G0024690 AT1G49740.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc02G0011710 AT3G15550.1 0 0 trichohyalin;(source:Araport11) Ipc02G0011720 AT5G66631.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0011730 AT1G52790.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0011740 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc02G0011750 AT5G11140.1 Arabidopsis phospholipase-like protein (PEARLI 4) family 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc02G0011760 AT1G15670.1 Galactose oxidase/kelch repeat superfamily protein Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB1, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0011770 AT3G09660.2 0 Encodes a minichromosome maintenance protein that is involved with RAD51 in a backup pathway that repairs meiotic double strand breaks without giving meiotic crossovers when the major pathway, which relies on DMC1, fails. minichromosome maintenance 8;(source:Araport11) Ipc02G0011780 AT1G52360.4 0 0 Coatomer, beta subunit;(source:Araport11) Ipc02G0011790 AT1G52360.3 0 0 Coatomer, beta subunit;(source:Araport11) Ipc02G0011800 AT3G15990.1 sulfate transporter 3;4 Encodes sulfate transporter Sultr3;4. sulfate transporter 3;(source:Araport11) Ipc02G0011810 AT1G79985.3 0 0 structural molecules protein;(source:Araport11) Ipc02G0011820 AT3G16000.1 MAR binding filament-like protein 1 Encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.MFP1 is required for the normal initiation of starch granules in Arabidopsis chloroplasts. Mutants lacking MFP1 have fewer starch granules per chloroplast relative to wild-type plants. MFP1 interacts with PTST2 (At1g27070), which is also involved in starch granule initiation. MFP1 is required for proper PTST2 location within the chloroplast. MAR binding filament-like protein 1;(source:Araport11) Ipc02G0011830 AT3G24490.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 0 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11) Ipc02G0011840 AT4G13270.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc02G0011850 AT3G16060.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc02G0011860 AT2G05170.1 vacuolar protein sorting 11 Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis. The mRNA is cell-to-cell mobile. vacuolar protein sorting 11;(source:Araport11) Ipc02G0011870 AT4G33870.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0011880 AT1G79890.1 RAD3-like DNA-binding helicase protein 0 RAD3-like DNA-binding helicase protein;(source:Araport11) Ipc02G0011890 AT3G19640.1 magnesium transporter 4 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 4;(source:Araport11) Ipc02G0011900 AT5G41080.2 PLC-like phosphodiesterases superfamily protein Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc02G0011910 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc02G0011920 AT1G52280.1 RAB GTPase homolog G3D 0 RAB GTPase homolog G3D;(source:Araport11) Ipc02G0011930 AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein Hydroxyphenylpyruvate reductase (HPPR), which catalyzes the reduction of 4-hydroxyphenylpyruvic acid (pHPP) to 4-hydroxyphenyllactic acid (pHPL). Together with HPPR3 and TAT1 involved in the biosynthesis of pHPL from tyrosine. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc02G0011940 AT1G79860.1 RHO guanyl-nucleotide exchange factor 12 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. RHO guanyl-nucleotide exchange factor 12;(source:Araport11) Ipc02G0011950 AT3G16140.1 photosystem I subunit H-1 Encodes subunit H of photosystem I reaction center subunit VI. photosystem I subunit H-1;(source:Araport11) Ipc02G0011960 AT1G79850.1 ribosomal protein S17 nuclear-encoded 30S chloroplast ribosomal protein S17 ribosomal protein S17;(source:Araport11) Ipc02G0011970 AT3G16170.1 AMP-dependent synthetase and ligase family protein Encodes a malonyl-CoA synthetase that is localized to the cytosol and mitochondrion. AAE13 produces two transcripts one of which includes an N terminal mitochondrial targeting motif. Loss of function of the mtAAE13 product results in growth arrest and lethality. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc02G0011980 AT3G16190.1 Isochorismatase family protein 0 Isochorismatase family protein;(source:Araport11) Ipc02G0011990 AT3G16190.1 Isochorismatase family protein 0 Isochorismatase family protein;(source:Araport11) Ipc02G0012000 AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0012010 AT3G16200.1 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc02G0012020 AT3G16230.2 Predicted eukaryotic LigT 0 Putative eukaryotic LigT;(source:Araport11) Ipc02G0012030 AT3G50390.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0012040 AT1G69750.5 0 0 cytochrome c oxidase 19-2;(source:Araport11) Ipc02G0012050 AT1G52155.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0012060 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc02G0012070 AT3G13470.1 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230). TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc02G0012080 AT3G16300.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc02G0012090 AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc02G0012100 AT5G25840.1 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc02G0012110 AT1G52140.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc02G0012120 AT1G79750.1 NADP-malic enzyme 4 The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed. NADP-malic enzyme 4;(source:Araport11) Ipc02G0012130 AT2G39210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0012140 AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0012150 AT3G16500.1 phytochrome-associated protein 1 phytochrome-associated protein 1 (PAP1) phytochrome-associated protein 1;(source:Araport11) Ipc02G0012160 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc02G0012170 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc02G0012180 AT1G16630.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0012190 AT5G56550.1 oxidative stress 3 Encodes OXIDATIVE STRESS 3 (OXS3), involved in tolerance to heavy metals and oxidative stress. oxidative stress 3;(source:Araport11) Ipc02G0012200 AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc02G0012210 AT1G51965.1 ABA Overly-Sensitive 5 Encodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid. ABA Overly-Sensitive 5;(source:Araport11) Ipc02G0012220 AT2G04220.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc02G0012230 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc02G0012240 AT3G21295.2 0 Pro-Trp-Pro-Trp repeat protein. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc02G0012250 AT2G19730.3 Ribosomal L28e protein family 0 Ribosomal L28e protein family;(source:Araport11) Ipc02G0012270 AT1G17730.1 vacuolar protein sorting 46.1 Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein. vacuolar protein sorting 46.1;(source:Araport11) Ipc02G0012260 AT3G21305.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0012280 AT1G51710.1 ubiquitin-specific protease 6 Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin. ubiquitin-specific protease 6;(source:Araport11) Ipc02G0012290 AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55 type 2A protein serine/threonine phosphatase 55 kDa B Protein phosphatase 2A, regulatory subunit PR55;(source:Araport11) Ipc02G0012300 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0012310 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc02G0012320 AT4G22285.1 Ubiquitin C-terminal hydrolases superfamily protein 0 Ubiquitin C-terminal hydrolases superfamily protein;(source:Araport11) Ipc02G0012330 AT1G17710.1 Pyridoxal phosphate phosphatase-related protein Encodes a phosphoethanolamine/phosphocholine phosphatase. It is likely to be involved in the liberation of inorganic phosphate from intracellular sources. Expression is upregulated in the shoot of cax1/cax3 mutant. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc02G0012340 AT1G73010.1 phosphate starvation-induced gene 2 Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant. inorganic pyrophosphatase 1;(source:Araport11) Ipc02G0012350 AT5G56760.1 serine acetyltransferase 1;1 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. serine acetyltransferase 1;(source:Araport11) Ipc02G0012360 #N/A #N/A #N/A #N/A Ipc02G0012370 AT4G12100.1 Cullin family protein 0 Cullin family protein;(source:Araport11) Ipc02G0012380 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0012390 AT3G26180.2 cytochrome P450, family 71, subfamily B, polypeptide 20 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 20;(source:Araport11) Ipc02G0012400 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0012410 AT5G05450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0012420 AT3G21250.2 multidrug resistance-associated protein 6 member of MRP subfamily multidrug resistance-associated protein 6;(source:Araport11) Ipc02G0012430 AT5G67490.1 0 SDHAF4 acts on FAD-SDH1 and promotes its assembly with SDH2, thereby stabilizing SDH2 and enabling its full assembly with SDH3/SDH4 to form the SDH complex. succinate dehydrogenase assembly factor;(source:Araport11) Ipc02G0012440 AT5G53110.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0012450 AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0012460 AT3G13750.1 beta galactosidase 1 beta-galactosidase, glycosyl hydrolase family 35 The mRNA is cell-to-cell mobile. beta galactosidase 1;(source:Araport11) Ipc02G0012470 #N/A #N/A #N/A #N/A Ipc02G0012480 AT3G13772.1 transmembrane nine 7 Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis. transmembrane nine 7;(source:Araport11) Ipc02G0012490 AT2G19520.1 Transducin family protein / WD-40 repeat family protein Controls flowering. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0012500 AT1G72960.1 Root hair defective 3 GTP-binding protein (RHD3) 0 Root hair defective 3 GTP-binding protein (RHD3);(source:Araport11) Ipc02G0012510 AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc02G0012520 AT3G13860.1 heat shock protein 60-3A 0 heat shock protein 60-3A;(source:Araport11) Ipc02G0012530 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc02G0012540 AT3G13780.1 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc02G0012550 AT1G72880.2 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc02G0012560 AT1G72670.1 IQ-domain 8 0 IQ-domain 8;(source:Araport11) Ipc02G0012570 AT3G13898.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc02G0012580 AT1G01370.4 0 Encodes a centromere-identifying protein histone H3 variant. Localized at centromeres in both mitotic and meiotic cells. Histone superfamily protein;(source:Araport11) Ipc02G0012590 AT1G17500.2 0 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc02G0012600 AT1G72710.1 casein kinase 1-like protein 2 Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. The mRNA is cell-to-cell mobile. casein kinase 1-like protein 2;(source:Araport11) Ipc02G0012610 AT2G19460.1 Protein of unknown function (DUF3511) 0 DUF3511 domain protein (DUF3511);(source:Araport11) Ipc02G0012620 AT5G57020.1 myristoyl-CoA:protein N-myristoyltransferase Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase. myristoyl-CoA:protein N-myristoyltransferase;(source:Araport11) Ipc02G0012630 AT1G54220.2 Dihydrolipoamide acetyltransferase, long form protein Encodes a subunit of the mitochondrial pyruvate dehydrogenase complex. Dihydrolipoamide acetyltransferase, long form protein;(source:Araport11) Ipc02G0012640 AT1G17530.1 translocase of inner mitochondrial membrane 23 Encodes a translocase of inner mitochondrial membrane. translocase of inner mitochondrial membrane 23;(source:Araport11) Ipc02G0012650 AT3G18710.1 plant U-box 29 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 29;(source:Araport11) Ipc02G0012660 AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression. midasin-like protein;(source:Araport11) Ipc02G0012670 AT3G14010.3 CTC-interacting domain 4 hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2. CTC-interacting domain 4;(source:Araport11) Ipc02G0012680 AT1G54180.2 BREVIS RADIX-like 3 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BREVIS RADIX-like 3;(source:Araport11) Ipc02G0012690 AT1G54130.1 RELA/SPOT homolog 3 This gene appears to be at least partially redundant with RSH2 (At3g14050). Guanosine tetraphosphate synthesized by RSH2/RSH3 (and CRSH At3g17470) to an unknown extent can repress chloroplast gene expression, and also reduce chloroplast size. RELA/SPOT homolog 3;(source:Araport11) Ipc02G0012700 AT5G46180.1 ornithine-delta-aminotransferase Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. ornithine-delta-aminotransferase;(source:Araport11) Ipc02G0012710 AT3G43240.1 ARID/BRIGHT DNA-binding domain-containing protein 0 ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc02G0012720 AT3G14170.2 0 CORD1 is a member of a novel and plant specific family of microtubule associated proteins. CORD1 binds microtubules via a conserved protein domain shared among family members. CORD functions may overlap;cord1 / cord2 mutants have defects in secondary cell wall pit morphology. hypothetical protein (DUF936);(source:Araport11) Ipc02G0012730 AT2G39050.1 hydroxyproline-rich glycoprotein family protein Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0012740 AT2G21240.2 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4;(source:Araport11) Ipc02G0012750 AT2G31083.2 0 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 5;(source:Araport11) Ipc02G0012760 AT1G11890.1 Synaptobrevin family protein member of SEC22 Gene Family Synaptobrevin family protein;(source:Araport11) Ipc02G0012770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0012780 AT1G74960.3 fatty acid biosynthesis 1 Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. fatty acid biosynthesis 1;(source:Araport11) Ipc02G0012790 AT1G17370.1 oligouridylate binding protein 1B Encodes an RNA–binding protein involved in stress granule formation. Regulated by a transposable element small RNA. oligouridylate binding protein 1B;(source:Araport11) Ipc02G0012800 AT1G74950.1 TIFY domain/Divergent CCT motif family protein 0 TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc02G0012810 AT3G23000.1 CBL-interacting protein kinase 7 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 7;(source:Araport11) Ipc02G0012820 AT3G50910.1 0 0 netrin receptor DCC;(source:Araport11) Ipc02G0012830 AT3G42880.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0012840 AT1G72470.1 exocyst subunit exo70 family protein D1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein D1;(source:Araport11) Ipc02G0012850 AT1G72480.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc02G0012860 AT3G14080.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc02G0012870 AT1G72490.2 0 DRO1 is a member of the IGT gene family and has a unknown function . It is expressed in roots and involved in leaf root architecture, specifically the orientation of lateral root angles. Involved in determining lateral root branch angle. hypothetical protein;(source:Araport11) Ipc02G0012880 AT4G33865.1 Ribosomal protein S14p/S29e family protein 0 Ribosomal protein S14p/S29e family protein;(source:Araport11) Ipc02G0012890 AT1G72510.2 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc02G0012900 AT4G19610.1 nucleotide binding;nucleic acid binding;RNA binding 0 nucleotide/nucleic acid binding protein;(source:Araport11) Ipc02G0012910 AT1G54115.1 cation calcium exchanger 4 Involved in cation (Na and K) homeostasis. cation calcium exchanger 4;(source:Araport11) Ipc02G0012920 AT1G72560.7 0 Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. ARM repeat superfamily protein;(source:Araport11) Ipc02G0012930 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc02G0012940 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc02G0012950 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc02G0012960 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc02G0012970 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0012980 AT1G72340.2 0 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0012990 AT3G14270.2 0 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant. phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc02G0013000 AT3G14280.1 0 0 LL-diaminopimelate aminotransferase;(source:Araport11) Ipc02G0013010 AT3G14290.1 20S proteasome alpha subunit E2 Encodes 20S proteasome subunit PAE2 (PAE2) that has RNase activity. 20S proteasome alpha subunit E2;(source:Araport11) Ipc02G0013020 AT4G12320.1 cytochrome P450, family 706, subfamily A, polypeptide 6 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 6;(source:Araport11) Ipc02G0013030 AT1G72330.1 alanine aminotransferase 2 Encodes for alanine aminotransferase ALAAT2. alanine aminotransferase 2;(source:Araport11) Ipc02G0013040 AT1G17280.9 0 Group XIV ubiquitin-conjugating enzyme that functions negative regulation of drought stress. ubiquitin-conjugating enzyme 34;(source:Araport11) Ipc02G0013050 #N/A #N/A #N/A #N/A Ipc02G0013060 AT5G49170.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0013070 AT1G53820.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0013080 AT1G74340.2 0 Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis. dolichol phosphate-mannose biosynthesis regulatory protein-like protein;(source:Araport11) Ipc02G0013090 AT1G28570.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc02G0013100 AT1G53800.1 0 0 muscle M-line assembly protein;(source:Araport11) Ipc02G0013110 AT1G17270.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0013120 AT1G53730.1 STRUBBELIG-receptor family 6 0 STRUBBELIG-receptor family 6;(source:Araport11) Ipc02G0013130 AT4G14210.3 0 Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid. phytoene desaturase 3;(source:Araport11) Ipc02G0013140 AT1G55730.2 cation exchanger 5 member of Low affinity calcium antiporter CAX2 family cation exchanger 5;(source:Araport11) Ipc02G0013160 AT2G17970.4 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0013150 AT5G40280.2 0 encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.The mRNA is cell-to-cell mobile. Prenyltransferase family protein;(source:Araport11) Ipc02G0013170 AT4G36090.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0 oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) Ipc02G0013180 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013210 AT5G05400.3 0 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc02G0013190 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013200 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013220 AT1G68120.1 basic pentacysteine 3 0 BASIC PENTACYSTEINE protein;(source:Araport11) Ipc02G0013230 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013240 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0013250 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013260 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013270 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0013280 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013290 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc02G0013300 AT4G22090.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0013310 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0013320 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0013330 #N/A #N/A #N/A #N/A Ipc02G0013340 #N/A #N/A #N/A #N/A Ipc02G0013350 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0013370 AT1G24090.1 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc02G0013380 AT1G32010.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc02G0013390 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0013400 AT1G34510.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0013410 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc02G0013420 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0013430 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0013440 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0013450 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc02G0013460 AT3G21215.4 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0013470 AT5G49830.1 exocyst complex component 84B Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. exocyst complex component 84B;(source:Araport11) Ipc02G0013480 AT1G51650.1 ATP synthase epsilon chain, mitochondrial 0 ATP synthase epsilon chain;(source:Araport11) Ipc02G0013490 #N/A #N/A #N/A #N/A Ipc02G0013500 AT1G27840.2 Transducin/WD40 repeat-like superfamily protein Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0013510 AT1G49720.3 0 Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses. abscisic acid responsive element-binding factor 1;(source:Araport11) Ipc02G0013520 AT3G13580.9 0 0 Ribosomal protein L30/L7 family protein;(source:Araport11) Ipc02G0013530 AT1G51600.2 ZIM-LIKE 2 member of a novel family of plant-specific GATA-type transcription factors. ZIM-LIKE 2;(source:Araport11) Ipc02G0013540 AT1G51560.1 Pyridoxamine 5'-phosphate oxidase family protein 0 Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11) Ipc02G0013550 AT1G51540.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0013560 AT1G78880.1 Ubiquitin-specific protease family C19-related protein Plasma membrane-localized proteins that negatively regulate cellulose synthesis by inhibiting the exocytosis of CESAs. Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc02G0013570 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc02G0013580 AT1G16840.4 0 0 hypothetical protein;(source:Araport11) Ipc02G0013590 AT1G78900.2 vacuolar ATP synthase subunit A Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit A;(source:Araport11) Ipc02G0013600 AT3G20270.3 lipid-binding serum glycoprotein family protein Encodes one of the two LBP/BPI related proteins (AT1G04970/LBR-1, AT3G20270/LBR-2) that bind to LPS directly and regulate PR1 expression. lipid-binding serum glycoprotein family protein;(source:Araport11) Ipc02G0013610 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc02G0013620 AT2G24400.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0013630 AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0013640 AT5G35390.1 Leucine-rich repeat protein kinase family protein Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0013650 AT3G44710.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc02G0013660 AT3G13050.4 0 Encodes a plant nicotinate transporter than can also transport trigonelline (N-methylnicotinate). Major facilitator superfamily protein;(source:Araport11) Ipc02G0013670 AT3G13020.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc02G0013680 AT3G13020.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc02G0013690 AT1G78995.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0013700 AT2G20000.1 CDC27 family protein Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap. CDC27 family protein;(source:Araport11) Ipc02G0013710 AT3G43300.3 0 AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. HOPM interactor 7;(source:Araport11) Ipc02G0013720 AT4G33220.1 pectin methylesterase 44 0 pectin methylesterase 44;(source:Araport11) Ipc02G0013730 AT2G44900.2 0 ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings. ARABIDILLO-1;(source:Araport11) Ipc02G0013740 AT4G33220.1 pectin methylesterase 44 0 pectin methylesterase 44;(source:Araport11) Ipc02G0013750 AT3G43230.1 RING/FYVE/PHD-type zinc finger family protein 0 RING/FYVE/PHD-type zinc finger family protein;(source:Araport11) Ipc02G0013760 AT3G14225.2 0 Contains lipase signature motif and GDSL domain. GDSL-motif lipase 4;(source:Araport11) Ipc02G0013770 AT3G43190.2 0 Encodes a protein with sucrose synthase activity (SUS4). sucrose synthase 4;(source:Araport11) Ipc02G0013780 AT5G20820.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0013790 AT5G20810.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0013800 AT3G26060.1 Thioredoxin superfamily protein encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus Thioredoxin superfamily protein;(source:Araport11) Ipc02G0013810 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc02G0013820 AT3G45420.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0013830 AT1G74960.3 fatty acid biosynthesis 1 Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. fatty acid biosynthesis 1;(source:Araport11) Ipc02G0013840 AT5G07710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0013850 AT5G20720.4 0 Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES. chaperonin 20;(source:Araport11) Ipc02G0013860 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0013870 AT5G20700.1 Protein of unknown function (DUF581) 0 senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc02G0013880 AT1G17370.1 oligouridylate binding protein 1B Encodes an RNA–binding protein involved in stress granule formation. Regulated by a transposable element small RNA. oligouridylate binding protein 1B;(source:Araport11) Ipc02G0013890 AT1G19180.3 0 JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. JAZ1 interacts with MYB21/MYB24, the WD-repeat/bHLH/MYB complex and IIId bHLH factors (bHLH3, bHLH13, bHLH14 and bHLH17) to regulate jasmonate responses, including stamen development, trichome initiation, anthocyanin accumulation and plant defense.The mRNA is cell-to-cell mobile. jasmonate-zim-domain protein 1;(source:Araport11) Ipc02G0013900 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0013910 AT1G19150.1 photosystem I light harvesting complex gene 6 PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA, The mRNA is cell-to-cell mobile. PSI type II chlorophyll a/b-binding protein (Lhca2*1);(source:Araport11) Ipc02G0013920 AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-related 0 inter-alpha-trypsin inhibitor heavy chain-like protein;(source:Araport11) Ipc02G0013930 AT5G04500.1 glycosyltransferase family protein 47 Encodes a member of the CAZy Glycosyltransferase Family 64 that is involved in glycosylinositolphosphorylceramide and sphingolipid glycosylation. In mutants, seed germination was less sensitive to salt stress than in wild-type plants. [The protein was expected to be Golgi-localized based on function as well as the Golgi localization of its homolog GMT1. However, GFP-fusion proteins localized both to the ER and Golgi, and especially to ER when co-expressed with Golgi markers. Therefore, localization cannot confidently be defined. (pers. communication, J. Mortimer)] glycosyltransferase family protein 47;(source:Araport11) Ipc02G0013940 AT3G52170.2 DNA binding 0 DNA binding protein;(source:Araport11) Ipc02G0013950 AT5G02420.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc02G0013960 AT5G04460.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0013970 AT5G04440.1 Protein of unknown function (DUF1997) 0 RAP release 2, galactose-binding-like domain protein, putative (DUF1997);(source:Araport11) Ipc02G0013980 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc02G0013990 AT4G30220.1 small nuclear ribonucleoprotein F 0 small nuclear ribonucleoprotein F;(source:Araport11) Ipc02G0014000 AT5G04420.3 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0014010 AT1G20510.1 OPC-8:0 CoA ligase1 0 OPC-8:0 CoA ligase1;(source:Araport11) Ipc02G0014020 AT3G10490.2 NAC domain containing protein 52 Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control. NAC domain containing protein 52;(source:Araport11) Ipc02G0014030 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0014040 AT5G04360.2 0 Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. limit dextrinase;(source:Araport11) Ipc02G0014050 AT5G22930.1 Protein of unknown function (DUF1635) 0 enabled-like protein (DUF1635);(source:Araport11) Ipc02G0014060 AT5G04310.3 0 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0014070 AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.Functions redundantly with the beta subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc02G0014080 AT5G04290.2 0 Encodes SPT5-Like, a member of the nuclear SPT5 (Suppressor of Ty insertion 5) RNA polymerase (RNAP) elongation factor family that is characterized by the presence of a carboxy-terminal extension with more than 40 WG/GW motifs. Interacts with AGO4. Required for RNA-directed DNA methylation.The mRNA is cell-to-cell mobile. kow domain-containing transcription factor 1;(source:Araport11) Ipc02G0014090 AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc02G0014100 AT2G39210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0014110 AT3G10420.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0014120 AT2G39480.2 0 0 P-glycoprotein 6;(source:Araport11) Ipc02G0014130 AT2G36840.1 ACT-like superfamily protein Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. ACT-like superfamily protein;(source:Araport11) Ipc02G0014140 AT3G54880.1 0 0 zinc finger protein;(source:Araport11) Ipc02G0014150 AT3G10410.1 SERINE CARBOXYPEPTIDASE-LIKE 49 0 SERINE CARBOXYPEPTIDASE-LIKE 49;(source:Araport11) Ipc02G0014160 AT3G10405.1 0 0 vacuolar acid trehalase;(source:Araport11) Ipc02G0014170 AT2G39170.1 0 0 MEF2BNB-like protein;(source:Araport11) Ipc02G0014180 AT3G54860.1 Sec1/munc18-like (SM) proteins superfamily Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis. Sec1/munc18-like (SM) proteins superfamily;(source:Araport11) Ipc02G0014190 AT3G54840.1 Ras-related small GTP-binding family protein Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. . In its active state interferes with the assembly of GDP-bound ARA7, PUF2, and VPS9a by competitively binding to PUF2 to diminish endosomal transport mediated by canonical RAB5. Ras-related small GTP-binding family protein;(source:Araport11) Ipc02G0014200 AT5G01420.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc02G0014210 AT5G04270.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc02G0014220 AT2G39130.2 0 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc02G0014230 AT5G04260.1 WCRKC thioredoxin 2 Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif. Functions in redox cascade with 2CPA and 2CPB via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Oxidizes redox-regulated proteins. WCRKC thioredoxin 2;(source:Araport11) Ipc02G0014240 AT5G04250.2 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc02G0014250 AT4G18760.1 receptor like protein 51 0 receptor like protein 51;(source:Araport11) Ipc02G0014260 AT3G09830.3 0 Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae. Protein kinase superfamily protein;(source:Araport11) Ipc02G0014270 AT3G10350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein One of 3 GET paralogs in Arabidopsis. GET3b is a chloroplast localized protein with no obvious role in Tail Anchored (TA) protein insertion. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0014280 AT3G42140.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0014290 AT2G43630.1 0 0 nucleusenvelope protein;(source:Araport11) Ipc02G0014300 AT3G57120.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0014310 AT2G39020.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound. The mRNA is cell-to-cell mobile. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc02G0014320 AT5G04240.1 Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein;(source:Araport11) Ipc02G0014330 AT2G37030.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0014340 AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0014350 AT5G03250.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0014360 AT1G06490.2 0 Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding. glucan synthase-like 7;(source:Araport11) Ipc02G0014370 AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11) Ipc02G0014380 AT4G32890.1 GATA transcription factor 9 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 9;(source:Araport11) Ipc02G0014390 AT5G17530.3 phosphoglucosamine mutase family protein 0 phosphoglucosamine mutase family protein;(source:Araport11) Ipc02G0014400 AT2G39000.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Encodes a chloroplast localized n-acetyltransfefase involved in N-terminal protein amino acid acetylation. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc02G0014410 AT5G20660.1 Zn-dependent exopeptidases superfamily protein 0 Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc02G0014420 AT5G20660.1 Zn-dependent exopeptidases superfamily protein 0 Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc02G0014430 AT2G28380.1 dsRNA-binding protein 2 Encodes a cytoplasmic dsRNA-binding protein DRB2. A maternally expressed imprinted gene. DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels. dsRNA-binding protein 2;(source:Araport11) Ipc02G0014440 AT1G68310.2 Protein of unknown function (DUF59) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized. Required for both leaf adaxial–abaxial polarity formation and normal cell proliferation. It is part of a protein complex with CIA1, NAR1, and MET18, which are highly conserved in eukaryotes and are involved in the biogenesis of cytosolic and nuclear Fe-S proteins. MIP18 family protein (DUF59);(source:Araport11) Ipc02G0014450 AT4G25030.2 0 Plastid localized protein of unknown function. Mutants are more susceptible to P. syringae and produce less callose upon infection. Serine/Threonine-kinase;(source:Araport11) Ipc02G0014460 AT1G67660.2 Restriction endonuclease, type II-like superfamily protein 0 Restriction endonuclease, type II-like superfamily protein;(source:Araport11) Ipc02G0014470 AT3G52260.2 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc02G0014480 AT2G35780.1 serine carboxypeptidase-like 26 0 serine carboxypeptidase-like 26;(source:Araport11) Ipc02G0014490 AT3G07990.1 serine carboxypeptidase-like 27 0 serine carboxypeptidase-like 27;(source:Araport11) Ipc02G0014500 AT3G12090.1 tetraspanin6 TET6 encodes a member of the TETRASPANIN gene family that is expressed in the vascular system and is involved in organ growth redundantly with TET5. tetraspanin6;(source:Araport11) Ipc02G0014510 AT3G07950.1 rhomboid protein-related 0 rhomboid protein-like protein;(source:Araport11) Ipc02G0014520 AT5G57860.3 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc02G0014530 #N/A #N/A #N/A #N/A Ipc02G0014540 AT2G20380.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0014550 AT1G48850.1 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase, putative 0 chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase;(source:Araport11) Ipc02G0014560 AT3G54950.1 patatin-like protein 6 Encodes pPLAIIIbeta, a member of the Group 3 patatin-related phospholipases. pPLAIIIbeta hydrolyzes phospholipids and galactolipids and additionally has acyl-CoA thioesterase activity. Alterations of pPLAIIIβ result in changes in lipid levels and composition. patatin-like protein 6;(source:Araport11) Ipc02G0014570 AT3G11950.5 0 publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model. TRAF-like superfamily protein;(source:Araport11) Ipc02G0014580 AT5G19290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0014590 AT1G78940.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc02G0014600 AT3G54820.1 plasma membrane intrinsic protein 2;5 0 plasma membrane intrinsic protein 2;(source:Araport11) Ipc02G0014610 AT3G12620.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0014620 AT5G02800.1 Protein kinase superfamily protein Encodes CDL1, a homolog of CDG1. CDL1 positively regulates brassinosteroid signaling and plant growth. Protein kinase superfamily protein;(source:Araport11) Ipc02G0014630 AT5G02810.1 pseudo-response regulator 7 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7;(source:Araport11) Ipc02G0014640 AT2G37250.1 adenosine kinase encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth adenosine kinase;(source:Araport11) Ipc02G0014650 AT3G55000.1 tonneau family protein Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2. tonneau family protein;(source:Araport11) Ipc02G0014660 AT5G13510.1 Ribosomal protein L10 family protein 0 Ribosomal protein L10 family protein;(source:Araport11) Ipc02G0014670 AT3G45740.1 hydrolase family protein / HAD-superfamily protein 0 hydrolase family protein / HAD-superfamily protein;(source:Araport11) Ipc10G0000040 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0000050 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc10G0000060 AT1G48220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0000070 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0007380 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0007370 AT1G74670.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc02G0007360 AT3G11220.1 Paxneb protein-related A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Paxneb protein-like protein;(source:Araport11) Ipc02G0007350 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007340 AT1G74680.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc02G0007330 AT1G54510.4 0 Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. NIMA-related serine/threonine kinase 1;(source:Araport11) Ipc02G0007320 AT5G19840.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0007310 AT1G18790.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc02G0007300 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0007290 AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc02G0007280 AT3G47530.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0007270 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0007260 AT3G47510.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0007250 AT5G65740.8 0 0 zinc ion binding protein;(source:Araport11) Ipc02G0007240 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0007230 AT5G39660.3 0 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2;(source:Araport11) Ipc02G0007220 AT1G11250.1 syntaxin of plants 125 member of SYP12 Gene Family syntaxin of plants 125;(source:Araport11) Ipc02G0007210 AT1G26550.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0007200 AT1G30760.2 0 Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes.The mRNA is cell-to-cell mobile. FAD-binding Berberine family protein;(source:Araport11) Ipc02G0007190 AT5G61410.2 D-ribulose-5-phosphate-3-epimerase Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA D-ribulose-5-phosphate-3-epimerase;(source:Araport11) Ipc02G0007180 AT1G78810.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0007170 AT5G61390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0007160 AT3G29100.3 0 Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated. vesicle transport V-snare 13;(source:Araport11) Ipc02G0007150 AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0007140 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0007130 AT5G07720.1 Galactosyl transferase GMA12/MNN10 family protein 0 Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc02G0007120 AT5G61360.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007110 AT4G20060.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0007100 AT1G18660.3 zinc finger (C3HC4-type RING finger) family protein Membrane localized protein of unknown function. Involved in negative regulation of immune response. Mutants have increased resistance to pathogens. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0007090 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc02G0007080 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc02G0007070 AT5G07740.3 0 0 actin binding protein;(source:Araport11) Ipc02G0007060 AT4G05360.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0007050 AT5G59220.2 0 Encodes a member of the PP2C family (Clade A protein phosphatases type 2C). Functions as a negative regulator of osmotic stress and ABA signaling. PP2C protein (Clade A protein phosphatases type 2C);(source:Araport11) Ipc02G0007040 AT1G18670.2 0 Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. Protein kinase superfamily protein;(source:Araport11) Ipc02G0007030 AT1G18680.1 HNH endonuclease domain-containing protein 0 HNH endonuclease domain-containing protein;(source:Araport11) Ipc02G0007020 AT5G57990.1 ubiquitin-specific protease 23 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 23;(source:Araport11) Ipc02G0007010 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0007000 AT2G03350.1 Protein of unknown function, DUF538 0 DUF538 family protein (Protein of unknown function, DUF538);(source:Araport11) Ipc02G0006990 AT1G12150.2 0 0 weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc02G0006980 AT3G05210.1 nucleotide repair protein, putative encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10. nucleotide repair protein;(source:Araport11) Ipc02G0006970 AT5G07830.1 glucuronidase 2 Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation. The mRNA is cell-to-cell mobile. glucuronidase 2;(source:Araport11) Ipc02G0006960 AT1G26580.2 0 0 ELM2 domain protein;(source:Araport11) Ipc02G0006950 AT5G07910.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0006940 AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative 0 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS;(source:Araport11) Ipc02G0006930 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc02G0006920 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006910 AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain protein/ABA-responsive-like protein;(source:Araport11) Ipc02G0006900 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006890 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006880 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006870 AT3G47920.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc02G0006860 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0006850 #N/A #N/A #N/A #N/A Ipc02G0006840 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006830 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006820 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006810 AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related 0 GRAM domain-containing protein / ABA-responsive protein-like protein;(source:Araport11) Ipc02G0006800 AT4G34320.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc02G0006790 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0006780 AT5G47720.4 Thiolase family protein Encodes a functional acetoacetyl-CoA thiolase that is functionally redundant with AACT2. Loss-of-function mutants show no apparent growth phenotypes. Thiolase family protein;(source:Araport11) Ipc02G0006770 AT3G17040.2 high chlorophyll fluorescent 107 It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. It binds in the psbT?psbH intercistronic region and blocks the progression of 5′ → 3′ exoribonucleases, which defines the 5′ end of processed psbH transcripts and also stabilizes the downstream RNA segment. In addition, HCF107 binding remodels the structure of the psbH 5′ UTR in a way that can account for its ability to enhance psbH translation. high chlorophyll fluorescent 107;(source:Araport11) Ipc02G0006760 AT3G26650.1 glyceraldehyde 3-phosphate dehydrogenase A subunit Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent). glyceraldehyde 3-phosphate dehydrogenase A subunit;(source:Araport11) Ipc02G0006750 AT1G33140.1 Ribosomal protein L6 family Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2. The mRNA is cell-to-cell mobile. Ribosomal protein L6 family;(source:Araport11) Ipc02G0006740 AT1G17150.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0006730 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc02G0006720 AT4G15450.1 Senescence/dehydration-associated protein-related 0 Senescence/dehydration-associated protein-like protein;(source:Araport11) Ipc02G0006710 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0006700 #N/A #N/A #N/A #N/A Ipc02G0006690 AT1G21510.1 0 0 TPRXL;(source:Araport11) Ipc02G0006680 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0006670 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0006660 AT2G34300.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0006650 AT1G44790.1 ChaC-like family protein 0 ChaC-like family protein;(source:Araport11) Ipc02G0006640 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc02G0006630 AT1G77230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0006620 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc02G0006610 AT2G40570.1 initiator tRNA phosphoribosyl transferase family protein 0 initiator tRNA phosphoribosyl transferase family protein;(source:Araport11) Ipc02G0006600 AT2G21190.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc02G0006590 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006580 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006570 AT2G35190.1 novel plant snare 11 plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate. Putative plant snare 11;(source:Araport11) Ipc02G0006560 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc02G0006550 AT4G33740.5 0 0 myb-like protein X;(source:Araport11) Ipc02G0006540 #N/A #N/A #N/A #N/A Ipc02G0006530 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006520 AT1G14550.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0006510 AT1G64370.1 0 0 filaggrin-like protein;(source:Araport11) Ipc02G0006500 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0006490 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0006480 AT3G28460.2 0 0 methyltransferase;(source:Araport11) Ipc02G0006470 AT1G26540.1 Agenet domain-containing protein 0 Agenet domain-containing protein;(source:Araport11) Ipc02G0006460 AT5G22760.1 PHD finger family protein 0 PHD finger family protein;(source:Araport11) Ipc02G0006450 AT1G77180.2 chromatin protein family Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress. SKIP lengthens period of the circadian clock by impairing the alternative splicing of PRR7 and PRR9. SKIP regulates the splicing of SEF pre-mRNA and suppresses flowering by activation of FLC. chromatin protein family;(source:Araport11) Ipc02G0006440 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006430 AT1G73965.1 CLAVATA3/ESR-RELATED 13 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 13;(source:Araport11) Ipc02G0006420 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0022210 AT5G39775.1 0 0 Gag-Pol polyprotein/retrotransposon;(source:Araport11) Ipc05G0022200 #N/A #N/A #N/A #N/A Ipc05G0022190 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc05G0022180 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc05G0022170 AT1G15360.2 0 Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0022160 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0022150 AT3G03290.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc05G0022140 AT2G21940.4 shikimate kinase 1 Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves, and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast. shikimate kinase 1;(source:Araport11) Ipc05G0022130 AT3G51690.1 PIF1 helicase DNA helicase homolog PIF1. PIF1 helicase;(source:Araport11) Ipc05G0022120 AT5G06820.1 STRUBBELIG-receptor family 2 0 STRUBBELIG-receptor family 2;(source:Araport11) Ipc05G0022110 AT1G16480.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0022100 AT3G15730.1 phospholipase D alpha 1 Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. The mRNA is cell-to-cell mobile. phospholipase D alpha 1;(source:Araport11) Ipc05G0022090 AT1G07250.1 UDP-glucosyl transferase 71C4 0 UDP-glucosyl transferase 71C4;(source:Araport11) Ipc05G0022080 AT3G15760.1 0 0 cytochrome P450 family protein;(source:Araport11) Ipc05G0022070 AT4G22360.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) Ipc05G0022060 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0022050 AT5G25360.3 0 0 hypothetical protein;(source:Araport11) Ipc05G0022040 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0022030 AT4G12770.1 Chaperone DnaJ-domain superfamily protein Negative regulation of growth and endocytosis, most likely as a result of inhibition of the recruitment of clathrin to endocytic pits. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc05G0022020 AT2G25490.1 EIN3-binding F box protein 1 Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile. EIN3-binding F box protein 1;(source:Araport11) Ipc05G0022010 AT1G80133.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc05G0022000 AT1G02630.1 Nucleoside transporter family protein 0 Nucleoside transporter family protein;(source:Araport11) Ipc05G0021990 AT3G10070.1 TBP-associated factor 12 Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. TBP-associated factor 12;(source:Araport11) Ipc05G0021980 AT5G20200.1 nucleoporin-related 0 nucleoporin-like protein;(source:Araport11) Ipc05G0021970 AT3G15790.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 11;(source:Araport11) Ipc05G0021960 AT1G45063.2 copper ion binding;electron carriers 0 copper ion binding / electron carrier protein;(source:Araport11) Ipc05G0021950 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0021940 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc05G0021930 AT1G45063.2 copper ion binding;electron carriers 0 copper ion binding / electron carrier protein;(source:Araport11) Ipc05G0021920 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc05G0021910 AT3G61720.1 Ca2+dependent plant phosphoribosyltransferase family protein 0 Ca2+dependent plant phosphoribosyltransferase family protein;(source:Araport11) Ipc05G0021900 AT4G12060.1 Double Clp-N motif protein 0 Double Clp-N motif protein;(source:Araport11) Ipc05G0021890 AT1G58410.4 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc05G0021880 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0021870 AT4G39520.1 GTP-binding protein-related Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity. GTP-binding protein-like protein;(source:Araport11) Ipc05G0021860 AT5G17370.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0021850 AT5G14620.1 domains rearranged methyltransferase 2 A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. domains rearranged methyltransferase 2;(source:Araport11) Ipc05G0021840 AT2G34925.1 CLAVATA3/ESR-RELATED 42 Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The protein is expressed in leaf axils and the shoot apical meristem and is involved in axillary bud formation. CLAVATA3/ESR-RELATED 42;(source:Araport11) Ipc05G0021830 AT1G30870.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0021820 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc05G0021810 AT4G20160.3 0 0 golgin family A protein;(source:Araport11) Ipc05G0021800 AT2G34900.1 Transcription factor GTE6 Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. Transcription factor GTE6;(source:Araport11) Ipc05G0021790 AT1G64500.1 Glutaredoxin family protein A member of a protein family found in plants and animals that contain conserved C-terminal glutaredoxin-like and putative zinc-binding cysteine-rich domains. It is involved in light stimulated actin bundling and chloroplast movement. The mRNA is cell-to-cell mobile. Glutaredoxin family protein;(source:Araport11) Ipc05G0021780 AT5G44680.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc05G0021770 AT5G18520.1 Lung seven transmembrane receptor family protein Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. The mRNA is cell-to-cell mobile. Lung seven transmembrane receptor family protein;(source:Araport11) Ipc05G0021760 AT5G44670.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc05G0021750 AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 4 APO RNA-binding protein (DUF794);(source:Araport11) Ipc05G0021740 AT1G47750.1 peroxin 11A member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation. peroxin 11A;(source:Araport11) Ipc05G0021730 AT4G20190.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0021720 AT5G10880.1 tRNA synthetase-related / tRNA ligase-related 0 tRNA synthetase-related / tRNA ligase-like protein;(source:Araport11) Ipc05G0021710 AT1G30840.2 purine permease 4 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 4;(source:Araport11) Ipc05G0021700 AT5G44635.1 minichromosome maintenance (MCM2/3/5) family protein 0 minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc05G0021690 AT4G20260.6 plasma-membrane associated cation-binding protein 1 Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels. The mRNA is cell-to-cell mobile. plasma-membrane associated cation-binding protein 1;(source:Araport11) Ipc05G0021680 AT2G33260.2 0 0 Tryptophan/tyrosine permease;(source:Araport11) Ipc05G0021670 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0021660 AT2G01860.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0021650 AT4G20310.4 0 Encodes a Golgi-localized protease that can cleave the transcription factors bZIP17 and bZIP28 that are translocated from the ER through the Golgi so that the transcription factors can be released to translocate into the nucleus. Peptidase M50 family protein;(source:Araport11) Ipc05G0021640 AT1G30820.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) Ipc05G0021630 AT1G72730.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc05G0021620 AT3G56860.9 0 encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3 Prime-UTRs and contributing to the stabilization of mRNAs in the nucleus. UBP1-associated protein 2A;(source:Araport11) Ipc05G0021610 AT3G57660.2 0 Encodes a subunit of RNA polymerase I (aka RNA polymerase A).The mRNA is cell-to-cell mobile. nuclear RNA polymerase A1;(source:Araport11) Ipc05G0021600 AT4G10380.1 NOD26-like intrinsic protein 5;1 Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells. NOD26-like intrinsic protein 5;(source:Araport11) Ipc05G0021590 AT1G43722.1 0 0 nuclease;(source:Araport11) Ipc05G0021580 AT4G38120.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0021570 AT1G72680.1 cinnamyl-alcohol dehydrogenase 0 cinnamyl-alcohol dehydrogenase;(source:Araport11) Ipc05G0021560 AT1G72680.1 cinnamyl-alcohol dehydrogenase 0 cinnamyl-alcohol dehydrogenase;(source:Araport11) Ipc05G0021550 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0021540 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc05G0021530 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc05G0021520 AT2G18196.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0021510 AT2G46870.1 AP2/B3-like transcriptional factor family protein Member of the RAV family of DNA binding proteins. Contains B3 domain. Recognizes 5'-CACCTG-'3 motif. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc05G0021500 AT4G23250.3 0 0 cysteine-rich receptor-like protein kinase 17;(source:Araport11) Ipc05G0021490 AT1G01050.2 0 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. pyrophosphorylase 1;(source:Araport11) Ipc05G0021480 AT2G46800.5 0 Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis. zinc transporter;(source:Araport11) Ipc05G0021470 AT1G20960.2 U5 small nuclear ribonucleoprotein helicase, putative Similar to DEAD/DExH box ATP-dependent RNA helicase . Required for proper splicing of FLC. Mutants have reduced FLC levels and are early flowering. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc05G0021460 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0021450 AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein membrane related protein CP5 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc05G0021440 AT1G32860.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc05G0021430 AT4G10570.1 ubiquitin-specific protease 9 encodes a ubiquitin-specific protease family member, UBP9. ubiquitin-specific protease 9;(source:Araport11) Ipc05G0021420 AT1G32780.1 GroES-like zinc-binding dehydrogenase family protein 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc05G0021410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0021400 AT1G01110.2 IQ-domain 18 0 IQ-domain 18;(source:Araport11) Ipc05G0021390 AT1G64690.2 0 Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips. branchless trichome;(source:Araport11) Ipc05G0021380 AT5G42090.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc05G0021370 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0021360 AT4G02290.2 0 0 glycosyl hydrolase 9B13;(source:Araport11) Ipc05G0021350 AT2G34880.1 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein JMJ15 is a novel H3K4 demethylase that regulates genes involved in flowering and response to stress. It is also a maternally expressed, imprinted gene. Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc05G0021340 AT5G49800.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc05G0021330 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0021320 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0021310 AT4G02290.1 glycosyl hydrolase 9B13 0 glycosyl hydrolase 9B13;(source:Araport11) Ipc05G0021300 AT1G64680.1 0 0 beta-carotene isomerase D27;(source:Araport11) Ipc05G0021290 AT4G24140.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0021280 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0021270 AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 is bHLH transcriptional regulator. It functions as a JAZ-interacting transcription factor that acts together with MYC2 and MYC3 to activate JA-responses. It also functions in blue light mediated secondary cell wall biogenesis via regulation of NST1 expression. MYC4 directly binds to NST1 promoter and activates its expression. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc05G0021260 AT2G46680.1 homeobox 7 encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. homeobox 7;(source:Araport11) Ipc05G0021250 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc05G0021240 AT2G46660.1 cytochrome P450, family 78, subfamily A, polypeptide 6 Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth. cytochrome P450, family 78, subfamily A, polypeptide 6;(source:Araport11) Ipc05G0021230 AT1G64660.1 methionine gamma-lyase Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis. The mRNA is cell-to-cell mobile. methionine gamma-lyase;(source:Araport11) Ipc05G0021220 AT3G50790.2 0 0 esterase/lipase/thioesterase family protein;(source:Araport11) Ipc05G0021210 AT4G24130.1 Protein of unknown function, DUF538 0 DUF538 family protein (Protein of unknown function, DUF538);(source:Araport11) Ipc05G0021200 AT3G47340.4 0 encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene Primes expression pattern is responding to the level of sugar in the cell. glutamine-dependent asparagine synthase 1;(source:Araport11) Ipc05G0021190 AT5G41940.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc05G0021180 AT5G41950.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0021170 AT4G24120.1 YELLOW STRIPE like 1 Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1). YELLOW STRIPE like 1;(source:Araport11) Ipc05G0021150 AT5G12260.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc05G0021160 AT4G26340.1 F-box/RNI-like/FBD-like domains-containing protein 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc05G0021140 AT4G10730.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0021130 AT5G41970.1 Metal-dependent protein hydrolase 0 Metal-dependent protein hydrolase;(source:Araport11) Ipc05G0021120 AT4G10750.1 Phosphoenolpyruvate carboxylase family protein 0 Phosphoenolpyruvate carboxylase family protein;(source:Araport11) Ipc05G0021110 AT1G64640.1 early nodulin-like protein 8 0 early nodulin-like protein 8;(source:Araport11) Ipc05G0021100 AT4G10760.1 mRNAadenosine methylase Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. mRNAadenosine methylase;(source:Araport11) Ipc05G0021090 AT4G10790.1 UBX domain-containing protein Encodes a member of the plant UBX-domain containing (PUX) protein family. It is an integral lipid droplet (LD) protein that associates with a subpopulation of LDs during seed germination. It likely acts as an adaptor recruiting CDC48A to ubiquitinated oleosins, thus facilitating the dislocation of oleosins from LDs by the segregase activity of CDC48A. UBX domain-containing protein;(source:Araport11) Ipc05G0021080 AT2G27230.2 transcription factor-related Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. transcription factor-like protein;(source:Araport11) Ipc05G0021070 AT5G42000.1 ORMDL family protein 0 ORMDL family protein;(source:Araport11) Ipc05G0021060 AT4G24060.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc05G0021050 AT5G24320.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0021040 AT1G06590.1 0 0 anaphase-promoting complex subunit;(source:Araport11) Ipc05G0021030 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc05G0021020 AT1G64600.1 methyltransferases;copper ion binding 0 copper ion binding / methyltransferase;(source:Araport11) Ipc05G0021010 AT4G24050.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0021000 AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei. Heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc05G0020990 AT5G20480.2 0 Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. EF-TU receptor;(source:Araport11) Ipc05G0020980 AT1G17440.2 Transcription initiation factor TFIID subunit A Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. Cytokinin-hypersensitive 1 (CKH1) mutants are characterized by rapidly growing calli with a green color at low levels of cytokinins, which are insufficient to induce such cytokinin responses in wild-type explants. It is hypothesized that CKH1 acts as a negative regulator of cytokinin signaling in Arabidopsis. Transcription initiation factor TFIID subunit A;(source:Araport11) Ipc05G0020970 AT5G53486.2 0 0 transmembrane protein;(source:Araport11) Ipc05G0020960 AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0020950 AT4G10850.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc05G0020940 AT4G24020.1 NIN like protein 7 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor. The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc05G0020930 AT1G48160.2 0 0 signal recognition particle 19 kDa protein, putative / SRP19;(source:Araport11) Ipc05G0020920 AT1G48160.2 0 0 signal recognition particle 19 kDa protein, putative / SRP19;(source:Araport11) Ipc05G0020910 AT1G04960.1 Protein of unknown function (DUF1664) 0 golgin family A protein (DUF1664);(source:Araport11) Ipc05G0020900 AT4G10890.3 0 0 DDE family endonuclease;(source:Araport11) Ipc05G0020890 AT3G49290.2 ABL interactor-like protein 2 One of four ABI-like proteins. ABL interactor-like protein 2;(source:Araport11) Ipc05G0020880 AT1G64510.1 Translation elongation factor EF1B/ribosomal protein S6 family protein 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc05G0020870 AT4G24015.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0016760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027470 AT2G33385.2 actin-related protein C2B 0 actin-related protein C2B;(source:Araport11) Ipc01G0027460 AT2G18170.1 MAP kinase 7 0 MAP kinase 7;(source:Araport11) Ipc01G0027450 AT1G31410.1 putrescine-binding periplasmic protein-related 0 putrescine-binding periplasmic protein-like protein;(source:Araport11) Ipc01G0027440 AT3G23590.1 REF4-related 1 Encodes a protein shown to physically associate with the conserved transcriptional coregulatory complex, Mediator, and is involved in the regulation of phenylpropanoid homeostasis. Acts redundantly with REF4/MED5b (At2g48110). Required for expression of some dark-upregulated genes. RFR1 is the MED5a subunit of the mediator complex. REF4-related 1;(source:Araport11) Ipc01G0027430 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027420 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc01G0027410 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc01G0027400 AT1G48520.2 GLU-ADT subunit B Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836). GLU-ADT subunit B;(source:Araport11) Ipc01G0027390 AT1G65070.1 DNA mismatch repair protein MutS, type 2 0 DNA mismatch repair protein MutS, type 2;(source:Araport11) Ipc01G0027380 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc01G0027370 AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a pectin methyl esterase involved in embryo development. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0027360 AT5G12480.2 calmodulin-domain protein kinase 7 calmodulin-domain protein kinase CDPK isoform 7 (CPK7) calmodulin-domain protein kinase 7;(source:Araport11) Ipc01G0027350 AT5G23310.1 Fe superoxide dismutase 3 Fe superoxide dismutase Fe superoxide dismutase 3;(source:Araport11) Ipc01G0027340 AT5G19010.1 mitogen-activated protein kinase 16 member of MAP Kinase mitogen-activated protein kinase 16;(source:Araport11) Ipc01G0027330 AT3G06190.1 BTB-POZ and MATH domain 2 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 2;(source:Araport11) Ipc01G0027320 AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0027310 AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0027300 AT5G08740.1 NAD(P)H dehydrogenase C1 Encodes a dedicated Type II NADPH dehydrogenase that catalyzes the penultimate step in phylloquinone (vitamin K1). biosynthesis NAD(P)H dehydrogenase C1;(source:Araport11) Ipc01G0027290 AT5G14000.2 0 0 NAC domain containing protein 84;(source:Araport11) Ipc01G0027280 AT5G18980.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0027270 AT3G11130.1 Clathrin, heavy chain CHC1 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis. Mutants also have increased dehydration tolerance which may be related to the overall slower stomatal aperture dynamics. Overall growth is affected. Clathrin, heavy chain;(source:Araport11) Ipc01G0027260 AT5G35630.3 glutamine synthetase 2 chloroplastic glutamine synthetase The mRNA is cell-to-cell mobile. glutamine synthetase 2;(source:Araport11) Ipc01G0027250 AT4G15470.1 Bax inhibitor-1 family protein 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc01G0027240 AT4G15470.1 Bax inhibitor-1 family protein 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc01G0027230 AT1G30790.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0027220 AT4G13110.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc01G0027210 AT4G15475.1 F-box/RNI-like superfamily protein Contributes to UV tolerance through nucleotide excision repair. F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0027200 AT3G06260.1 galacturonosyltransferase-like 4 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 4;(source:Araport11) Ipc01G0027190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027180 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027170 AT1G65040.2 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc01G0027160 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027150 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc01G0027140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027130 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc01G0027120 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0027110 AT1G77800.6 0 0 PHD finger family protein;(source:Araport11) Ipc01G0027100 AT5G18930.1 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc01G0027090 AT1G08760.1 Plant protein of unknown function (DUF936) CORD2 is a member of a novel and plant specific family of microtubule associated proteins. CORD1 binds microtubules via a conserved protein domain shared among family members. CORD functions may overlap;cord1 / cord2 mutants have defects in secondary cell wall pit morphology. GPI-anchored adhesin-like protein, putative (DUF936);(source:Araport11) Ipc01G0027080 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc01G0027070 AT3G06270.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0027060 AT4G15530.6 pyruvate orthophosphate dikinase Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues. pyruvate orthophosphate dikinase;(source:Araport11) Ipc01G0027050 AT4G15545.1 0 NAI1 interacting protein, involved in ER body formation. PH-response transcription factor;(source:Araport11) Ipc01G0027040 AT5G18910.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0027030 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0027020 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0027010 AT3G20730.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 PPR superfamily protein;(source:Araport11) Ipc01G0027000 AT5G18860.2 0 Encodes a purine nucleoside hydrolase active in the apoplast. It might play a role in salvaging extracellular ATP. NSH3 transcript levels rise in response to jasmonic acid and wounding. inosine-uridine preferring nucleoside hydrolase family protein;(source:Araport11) Ipc01G0026990 AT1G50510.1 indigoidine synthase A family protein 0 indigoidine synthase A family protein;(source:Araport11) Ipc01G0026980 AT5G18860.2 0 Encodes a purine nucleoside hydrolase active in the apoplast. It might play a role in salvaging extracellular ATP. NSH3 transcript levels rise in response to jasmonic acid and wounding. inosine-uridine preferring nucleoside hydrolase family protein;(source:Araport11) Ipc01G0026970 AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc01G0026960 AT5G18860.2 0 Encodes a purine nucleoside hydrolase active in the apoplast. It might play a role in salvaging extracellular ATP. NSH3 transcript levels rise in response to jasmonic acid and wounding. inosine-uridine preferring nucleoside hydrolase family protein;(source:Araport11) Ipc02G0009770 AT5G26250.1 Major facilitator superfamily protein Sugar transporter expressed strongly in pollen and pollen tubes. Major facilitator superfamily protein;(source:Araport11) Ipc02G0009760 AT3G22330.1 putative mitochondrial RNA helicase 2 DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2;(source:Araport11) Ipc02G0009750 AT2G35795.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0009740 AT5G22110.1 DNA polymerase epsilon subunit B2 Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions. DNA polymerase epsilon subunit B2;(source:Araport11) Ipc02G0009730 AT1G17950.1 myb domain protein 52 putative transcription factor: R2R3-MYB transcription family myb domain protein 52;(source:Araport11) Ipc02G0009720 AT3G54690.1 Sugar isomerase (SIS) family protein 0 Sugar isomerase (SIS) family protein;(source:Araport11) Ipc02G0009710 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc02G0009700 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009690 AT2G01940.1 C2H2-like zinc finger protein Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. C2H2-like zinc finger protein;(source:Araport11) Ipc02G0009680 AT4G18395.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009670 AT1G14685.4 0 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 2;(source:Araport11) Ipc02G0009660 AT4G24660.1 homeobox protein 22 0 homeobox protein 22;(source:Araport11) Ipc02G0009650 AT3G43810.1 calmodulin 7 EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant. calmodulin 7;(source:Araport11) Ipc02G0009640 AT1G48450.1 Protein of unknown function (DUF760) 0 alanine-tRNA ligase, putative (DUF760);(source:Araport11) Ipc02G0009630 AT1G48440.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc02G0009620 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc02G0009610 AT1G52450.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc02G0009600 AT1G26110.2 decapping 5 Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5;(source:Araport11) Ipc02G0009590 AT1G30860.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0009580 AT1G48960.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc02G0009570 AT3G06070.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009560 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0009550 AT1G73500.1 MAP kinase kinase 9 member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3. MAP kinase kinase 9;(source:Araport11) Ipc02G0009540 AT1G74180.1 receptor like protein 14 0 receptor like protein 14;(source:Araport11) Ipc02G0009530 #N/A #N/A #N/A #N/A Ipc02G0009520 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009510 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009500 AT1G30680.1 toprim domain-containing protein Twinkle is a dual localized (mitochondria and chloroplast) DNA primase-helicase. It synthesizes RNA primers from a 5′ -(G/C)GGA-3′ template, where the last two 3' nucleotides are cryptic. Mitochondrial protein involved in DNA replication which binds to DNA polymerases, Pol1A and Pol1B. toprim domain-containing protein;(source:Araport11) Ipc02G0009490 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009480 AT2G25470.1 receptor like protein 21 0 receptor like protein 21;(source:Araport11) Ipc02G0009470 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc02G0009460 AT1G43670.1 Inositol monophosphatase family protein Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus. The mRNA is cell-to-cell mobile. Inositol monophosphatase family protein;(source:Araport11) Ipc02G0009450 AT2G26330.1 Leucine-rich receptor-like protein kinase family protein Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. ER binds to the peptides STOMAGEN and EPF2 which compete for the same binding site. The ER-EFP2 complex activates MAPK signaling that inhibits stomatal development. ER-STOMAGEN does not activate MAPK signaling. Plants harboring loss of function alleles of er are more susceptible to heat stress than wild type. In Arabidopsis and other organisms, overexpression of ER confers thermotolerance via as yet undefined mechanisms. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc02G0009440 AT2G38995.4 0 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc02G0009430 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009420 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009410 AT4G13940.3 S-adenosyl-L-homocysteine hydrolase Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. The mRNA is cell-to-cell mobile. S-adenosyl-L-homocysteine hydrolase;(source:Araport11) Ipc02G0009400 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009390 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc02G0009380 AT3G07930.3 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc02G0009370 AT2G44198.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009360 AT1G18550.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc02G0009350 AT5G23100.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc02G0009340 AT5G23090.5 0 0 nuclear factor Y, subunit B13;(source:Araport11) Ipc02G0009330 AT3G25600.1 Calcium-binding EF-hand family protein Calmodulin like protein. Paralog of CML15. Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0009320 AT1G68430.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009310 AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein A member of the RPD gene family - there are13 annotated genes and one EST encoding RPD1-like proteins in Arabidopsis. Shows no homology to any protein of known function. Abundant expression found in the shoot apex and the root. rpd1 mutant is a temperature-sensitive mutant isolated on the basis of the impairment in adventitious roots formation in hypocotyl region. Also, disruption of the RPD1 gene by a T-DNA insertion caused embryogenesis arrest at the globular to transition stages. This phenotype is consistent with the hypothesized function of RPD1 in the maintenance of active cell proliferation. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc02G0009300 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0009290 AT2G33060.1 receptor like protein 27 0 receptor like protein 27;(source:Araport11) Ipc02G0009280 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0009270 #N/A #N/A #N/A #N/A Ipc02G0009260 AT4G23030.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc02G0009250 AT3G27835.1 Gamma-thionin family protein Encodes a defensin-like (DEFL) family protein. Gamma-thionin family protein;(source:Araport11) Ipc02G0009240 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc02G0009230 AT4G39070.1 B-box zinc finger family protein Encodes BZS1, a brassinosteroids-regulated BZR1 target (BRBT) gene. BZS1 is a putative zinc finger transcription factor. Expression of BZS1 was increased under BR-deficient condition and repressed by BR. Transgenic Arabidopsis plants overexpressing BZS1 showed a hypersensitivity to the BR biosynthetic inhibitor brassinazole (BRZ). In contrast, transgenic plants expressing reduced level of BZS1 had longer hypocotyls than wild type when grown on BRZ. B-box zinc finger family protein;(source:Araport11) Ipc02G0009220 AT3G16660.2 0 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc02G0009210 AT2G07671.1 ATP synthase subunit C family protein 0 ATP synthase subunit C family protein;(source:Araport11) Ipc02G0009200 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0009190 AT5G23060.1 calcium sensing receptor Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium. calcium sensing receptor;(source:Araport11) Ipc02G0009180 AT5G23050.1 acyl-activating enzyme 17 0 acyl-activating enzyme 17;(source:Araport11) Ipc02G0009170 AT3G58110.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0009160 AT5G35520.1 minichromosome instability 12 (mis12)-like encodes a homologue of the yeast (S. pombe) Mis12 (minichromosome instability) protein. MIS12 co-localizes with 180 bp repeats of centromeric DNA throughout the cell cycle with a similar pattern to AtCENH3/HTR12. Neither of these two proteins completely cover the 180 bp regions based on FISH analysis. minichromosome instability 12 (mis12)-like protein;(source:Araport11) Ipc02G0009150 AT2G23810.1 tetraspanin8 Member of TETRASPANIN family tetraspanin8;(source:Araport11) Ipc02G0009140 AT5G23040.2 0 Encodes a protein that enables protochlorophillide Primes binding to pPORA Primes transit sequence, regulating pPORA Primes translocation into the plastid stroma, and blocking movement of the translocating polypeptide chain back into the cytosol. Causes Bax mediated lethality in yeast by generating reactive oxygen species and this effect is suppressed by AtBI-1. cell growth defect factor-like protein (DUF3353);(source:Araport11) Ipc02G0009130 AT5G23050.1 acyl-activating enzyme 17 0 acyl-activating enzyme 17;(source:Araport11) Ipc02G0009120 AT5G08400.1 Protein of unknown function (DUF3531) 0 structural maintenance of chromosomes-like protein, putative (DUF3531);(source:Araport11) Ipc02G0009110 AT1G04960.1 Protein of unknown function (DUF1664) 0 golgin family A protein (DUF1664);(source:Araport11) Ipc02G0009100 AT1G48160.2 0 0 signal recognition particle 19 kDa protein, putative / SRP19;(source:Araport11) Ipc02G0009090 AT5G59390.5 0 0 XH/XS domain-containing protein;(source:Araport11) Ipc02G0009080 AT5G59390.5 0 0 XH/XS domain-containing protein;(source:Araport11) Ipc02G0009070 AT1G64530.1 Plant regulator RWP-RK family protein 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc02G0009060 AT5G08180.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc02G0009050 AT1G13580.3 LAG1 longevity assurance homolog 3 Encodes a ceramide synthase that together with LOH1 is essential for production of ceramides containing Very Long Chain Fatty acid VLCFA-Ceramides(mainly C 22 to 26). LAG1 longevity assurance-like protein;(source:Araport11) Ipc02G0009040 AT1G73880.1 UDP-glucosyl transferase 89B1 0 UDP-glucosyl transferase 89B1;(source:Araport11) Ipc02G0009030 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0009020 AT2G29360.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0009010 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0009000 AT3G53240.3 0 0 receptor like protein 45;(source:Araport11) Ipc02G0008990 AT5G06060.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0008980 AT1G12740.1 cytochrome P450, family 87, subfamily A, polypeptide 2 encodes a protein with cytochrome P450 domain cytochrome P450, family 87, subfamily A, polypeptide 2;(source:Araport11) Ipc02G0008970 AT1G26300.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc02G0008960 AT2G18110.1 Translation elongation factor EF1B/ribosomal protein S6 family protein 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc02G0008950 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc02G0008940 AT3G49740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0008930 AT5G50740.5 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc02G0008920 AT4G34960.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0008910 #N/A #N/A #N/A #N/A Ipc02G0008900 AT2G03800.1 D-aminoacyl-tRNA deacylases encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. D-aminoacyl-tRNA deacylase;(source:Araport11) Ipc02G0008890 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0008880 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc02G0008870 AT5G08110.3 0 Plays a role in the maintenance of genome stability and the repair of aberrant replication intermediates in the root meristem. Is involved with RAD1, FAN1, and RECQ4A in the repair of DNA CLs. UBQ, helicase-c and DEAD-like helicase domain-containing protein;(source:Araport11) Ipc02G0008860 AT5G08100.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc02G0008840 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc02G0008850 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc02G0008830 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc02G0008820 AT5G07010.1 sulfotransferase 2A Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). sulfotransferase 2A;(source:Araport11) Ipc02G0008810 AT2G29530.3 Tim10/DDP family zinc finger protein Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM9, AtTIM10 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei. Tim10/DDP family zinc finger protein;(source:Araport11) Ipc02G0008800 AT5G07010.1 sulfotransferase 2A Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). sulfotransferase 2A;(source:Araport11) Ipc02G0008790 AT1G18580.1 galacturonosyltransferase 11 Encodes a protein with putative galacturonosyltransferase activity.GAUT11 is required for pectin synthesis in seed coat epidermal cells and normal mucilage release. galacturonosyltransferase 11;(source:Araport11) Ipc02G0008780 AT2G03720.2 0 Involved in root hair development Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc02G0008770 AT5G60910.1 AGAMOUS-like 8 MADS box gene negatively regulated by APETALA1 AGAMOUS-like 8;(source:Araport11) Ipc02G0008760 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc02G0008750 AT3G08900.1 reversibly glycosylated polypeptide 3 RGP3 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It is a reversibly autoglycosylated protein. Fluorescently-tagged RGP3 is found in the cytosol and associated with Golgi-like particles when expressed in tobacco leaves. An RGP3-YFP fusion protein under the control a native promoter can be found in the endosperm of Arabidopsis embryos during the linear and bent cotyledon stages of development. reversibly glycosylated polypeptide 3;(source:Araport11) Ipc02G0008740 AT1G73380.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0008730 AT5G15630.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc02G0008720 AT5G60940.1 Transducin/WD40 repeat-like superfamily protein Member of CstF complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0008710 AT5G61220.3 0 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc02G0008700 AT5G54620.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc02G0008690 AT5G38410.1 Ribulose bisphosphate carboxylase (small chain) family protein Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity. Ribulose bisphosphate carboxylase (small chain) family protein;(source:Araport11) Ipc02G0008680 AT5G39040.1 transporter associated with antigen processing protein 2 Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2;(source:Araport11) Ipc02G0008670 AT1G26355.1 SPIRAL1-like1 SPIRAL1-LIKE1 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. GUS expression was detected only in pollen; however, no endogenous transcript was found. SPIRAL1-like1;(source:Araport11) Ipc02G0008660 AT1G80980.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc02G0008650 AT1G80700.1 0 0 stress response NST1-like protein;(source:Araport11) Ipc02G0008640 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0008630 AT5G40300.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc02G0008620 AT1G74120.1 Mitochondrial transcription termination factor family protein Encodes a mitochondrial transcription termination factor mTERF15. Required for mitochondrial nad2 intron 3 splicing and functional complex I activity. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc02G0008610 AT5G39040.1 transporter associated with antigen processing protein 2 Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2;(source:Araport11) Ipc02G0008600 AT5G60980.3 0 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc02G0008590 AT1G74210.1 PLC-like phosphodiesterases superfamily protein Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc02G0008580 AT1G74220.1 0 0 homeobox-like protein;(source:Araport11) Ipc02G0008570 AT5G56120.1 0 0 RNA polymerase II elongation factor;(source:Araport11) Ipc02G0008560 AT5G61040.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0008550 AT4G38270.1 galacturonosyltransferase 3 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 3;(source:Araport11) Ipc02G0008540 AT2G33040.1 gamma subunit of Mt ATP synthase 0 gamma subunit of Mt ATP synthase;(source:Araport11) Ipc02G0008530 AT5G61060.1 histone deacetylase 5 Encodes a member of the histone deacetylase family. histone deacetylase 5;(source:Araport11) Ipc02G0008520 AT5G57580.1 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc02G0008510 AT5G61140.2 U5 small nuclear ribonucleoprotein helicase Encodes a predicted protein with 30% identity with MER3/RCK. Similar to yast Brr2p DEAD/DExH box ATP-dependent RNA helicase. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc02G0008500 AT1G74310.1 heat shock protein 101 Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. heat shock protein 101;(source:Araport11) Ipc02G0008490 AT4G22930.2 0 Encodes dihydroorotase (PYR4). pyrimidin 4;(source:Araport11) Ipc02G0008480 AT5G61170.1 Ribosomal protein S19e family protein 0 Ribosomal protein S19e family protein;(source:Araport11) Ipc02G0008470 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc02G0008460 AT3G29360.2 UDP-glucose 6-dehydrogenase family protein Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein;(source:Araport11) Ipc02G0008450 AT5G04610.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0008440 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc02G0008430 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc02G0008420 AT5G08305.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0008410 AT3G18800.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0008400 AT1G51980.2 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc02G0008390 AT5G23210.1 serine carboxypeptidase-like 34 0 serine carboxypeptidase-like 34;(source:Araport11) Ipc02G0008380 AT4G30820.3 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related 0 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein;(source:Araport11) Ipc02G0008370 AT4G09530.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0008360 AT5G08300.1 Succinyl-CoA ligase, alpha subunit 0 Succinyl-CoA ligase, alpha subunit;(source:Araport11) Ipc02G0008350 AT1G50140.4 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0008340 AT5G45320.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc02G0008330 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0008320 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc02G0008310 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0008300 AT5G18636.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc02G0008290 AT5G23140.1 nuclear-encoded CLP protease P7 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). nuclear-encoded CLP protease P7;(source:Araport11) Ipc02G0008280 AT2G19430.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1;(source:Araport11) Ipc02G0008260 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc02G0008270 AT5G56620.1 NAC domain containing protein 99 0 NAC domain containing protein 99;(source:Araport11) Ipc02G0008250 AT1G15420.1 0 Encodes a novel plant specific protein that is co-expressed with components of pre-rRNA processing complex. Co-localizes with NuGWD1 and SWA1. WD repeat protein;(source:Araport11) Ipc02G0008240 AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein 0 Peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc02G0008230 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0008220 AT5G23120.2 0 encodes a stability and/or assembly factor of photosystem IIThe mRNA is cell-to-cell mobile. photosystem II stability/assembly factor, chloroplast (HCF136);(source:Araport11) Ipc02G0008210 #N/A #N/A #N/A #N/A Ipc02G0008200 AT1G01220.6 0 Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis. L-fucokinase/GDP-L-fucose pyrophosphorylase;(source:Araport11) Ipc02G0008190 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc02G0008180 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc14G0015920 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc14G0015910 AT1G31920.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015900 AT5G51200.1 Protein of unknown function (DUF3414) 0 nuclear pore complex protein (DUF3414);(source:Araport11) Ipc14G0015890 AT1G32130.1 Transcription elongation factor (TFIIS) family protein The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression. Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc14G0015880 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc14G0015870 AT2G35530.1 basic region/leucine zipper transcription factor 16 Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members. basic region/leucine zipper transcription factor 16;(source:Araport11) Ipc14G0015860 AT1G32170.1 xyloglucan endotransglucosylase/hydrolase 30 xyloglucan endotransglycosylase-related protein (XTR4) The mRNA is cell-to-cell mobile. xyloglucan endotransglucosylase/hydrolase 30;(source:Araport11) Ipc14G0015850 AT1G32190.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0015840 AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015830 AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015820 AT5G46030.3 0 0 transcription elongation factor-like protein;(source:Araport11) Ipc14G0015810 AT3G15150.1 RING/U-box superfamily protein Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance. RING/U-box superfamily protein;(source:Araport11) Ipc14G0015800 AT3G15180.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc14G0015790 AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015780 AT2G36850.1 glucan synthase-like 8 Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160). glucan synthase-like 8;(source:Araport11) Ipc14G0015770 AT5G61040.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0015760 AT3G06920.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015750 AT4G14150.1 phragmoplast-associated kinesin-related protein 1 Microtubule motor kinesin PAKRP1/Kinesin-12A. Together with PAKRP1L/Kinesin-12B, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. phragmoplast-associated kinesin-related protein 1;(source:Araport11) Ipc14G0015740 AT4G05120.2 0 Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine. Major facilitator superfamily protein;(source:Araport11) Ipc14G0015730 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc14G0015720 AT5G08450.3 0 Component of histone-deacetylase complexes. Interacts with HDA6 and HDA19 and facilitates histone deacetylation. Several salt-inducible genes are de-repressed in hdc1 mutants. Mutants are hypersensitive to ABA during germination, grow less and flower later than wildtype. HDC1-overexpressing plants display opposite phenotypes. zinc finger CCCH domain protein;(source:Araport11) Ipc14G0015710 AT5G08450.3 0 Component of histone-deacetylase complexes. Interacts with HDA6 and HDA19 and facilitates histone deacetylation. Several salt-inducible genes are de-repressed in hdc1 mutants. Mutants are hypersensitive to ABA during germination, grow less and flower later than wildtype. HDC1-overexpressing plants display opposite phenotypes. zinc finger CCCH domain protein;(source:Araport11) Ipc14G0015700 AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1 Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. phosphatidylinositol-4-phosphate 5-kinase 1;(source:Araport11) Ipc14G0015690 AT4G08180.4 0 0 OSBP(oxysterol binding protein)-related protein 1C;(source:Araport11) Ipc14G0015680 AT5G41025.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0015670 AT1G53460.1 0 0 craniofacial development protein;(source:Araport11) Ipc14G0015660 AT2G36000.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0015650 AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc14G0015640 AT5G64610.1 histone acetyltransferase of the MYST family 1 Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5. histone acetyltransferase of the MYST family 1;(source:Araport11) Ipc14G0015630 AT1G77810.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc14G0015620 AT1G54010.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc14G0015610 AT1G36730.1 Translation initiation factor IF2/IF5 0 Translation initiation factor IF2/IF5;(source:Araport11) Ipc14G0015600 AT1G21830.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0015590 AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc14G0015580 AT1G72930.1 toll/interleukin-1 receptor-like Toll/interleukin-1 receptor-like protein (TIR) mRNA, toll/interleukin-1 receptor-like protein;(source:Araport11) Ipc14G0015570 AT1G22030.1 0 0 BPS1-like protein;(source:Araport11) Ipc14G0015560 AT5G44710.1 0 0 37S ribosomal protein S27;(source:Araport11) Ipc14G0015550 AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0015540 AT5G65440.7 0 0 transmembrane protein;(source:Araport11) Ipc14G0015530 AT1G63270.1 non-intrinsic ABC protein 10 Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data. non-intrinsic ABC protein 10;(source:Araport11) Ipc14G0015520 AT2G47420.1 Ribosomal RNA adenine dimethylase family protein Encodes a putative rRNA dimethyltransferase. Ribosomal RNA adenine dimethylase family protein;(source:Araport11) Ipc14G0015510 AT3G22330.1 putative mitochondrial RNA helicase 2 DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2;(source:Araport11) Ipc14G0015500 AT5G60580.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0015490 AT3G09710.2 IQ-domain 1 Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue. IQ-domain 1;(source:Araport11) Ipc14G0015480 AT3G10260.2 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc14G0015470 AT3G24880.1 Helicase/SANT-associated, DNA binding protein Encodes a nuclear localized protein of unknown function that interacts with components of the NuA4 histone acetyltransferase complex. I Helicase/SANT-associated, DNA binding protein;(source:Araport11) Ipc14G0015460 AT5G19130.1 GPI transamidase component family protein / Gaa1-like family protein 0 GPI transamidase component family protein / Gaa1-like family protein;(source:Araport11) Ipc14G0015450 AT2G40390.1 0 0 neuronal PAS domain protein;(source:Araport11) Ipc14G0015440 AT5G08560.3 0 WRDR26 is a WD-40 repeat containing protein initially identified as an interacting partner RanBPM. Its expression is induced by abiotic stress as well as various plant growth regulators including IAA, ABA and ethylene. Role as a novel modulator of redox homeostatis, responding to developmental and stress signals to regulate leaf senescence. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc14G0015430 AT1G69320.1 CLAVATA3/ESR-RELATED 10 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 10;(source:Araport11) Ipc14G0015420 AT1G69320.1 CLAVATA3/ESR-RELATED 10 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 10;(source:Araport11) Ipc14G0015410 AT5G45110.1 NPR1-like protein 3 Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid. The mRNA is cell-to-cell mobile. NPR1-like protein 3;(source:Araport11) Ipc14G0015400 AT2G02060.2 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0015390 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0015380 AT3G03310.1 lecithin:cholesterol acyltransferase 3 0 lecithin:cholesterol acyltransferase 3;(source:Araport11) Ipc14G0015370 AT1G06660.1 0 Encodes JASON. jason mutant produces diploid male gametes leading to triploid progeny. Diploid gametes in the jason mutant are generated by a defect in male meiosis II. aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit;(source:Araport11) Ipc14G0015360 AT2G47620.1 SWITCH/sucrose nonfermenting 3A Homologous to yeast SWI3 and a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3C, the other two members of the SWI3 family. SWITCH/sucrose nonfermenting 3A;(source:Araport11) Ipc14G0015350 #N/A #N/A #N/A #N/A Ipc14G0015340 AT1G32100.1 pinoresinol reductase 1 Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. pinoresinol reductase 1;(source:Araport11) Ipc14G0015330 AT4G29940.2 pathogenesis related homeodomain protein A Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding. pathogenesis related homeodomain protein A;(source:Araport11) Ipc14G0015320 AT5G57150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0015310 AT3G63430.2 0 0 zinc finger CCCH domain protein;(source:Araport11) Ipc14G0015300 AT5G57180.2 chloroplast import apparatus 2 Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast. chloroplast import apparatus 2;(source:Araport11) Ipc14G0015290 AT1G17880.1 basic transcription factor 3 0 basic transcription factor 3;(source:Araport11) Ipc14G0015280 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0015270 AT1G73230.1 Nascent polypeptide-associated complex NAC 0 Nascent polypeptide-associated complex NAC;(source:Araport11) Ipc14G0015260 AT1G17880.1 basic transcription factor 3 0 basic transcription factor 3;(source:Araport11) Ipc14G0015250 AT1G34260.3 0 Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.The mRNA is cell-to-cell mobile. FORMS APLOID AND BINUCLEATE CELLS 1A;(source:Araport11) Ipc14G0015240 AT2G36680.1 Modifier of rudimentary (Mod(r)) protein 0 Modifier of rudimentary (Mod(r)) protein;(source:Araport11) Ipc14G0015230 AT1G71865.1 0 0 PyrD;(source:Araport11) Ipc14G0015220 AT1G29670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc14G0015210 AT4G15760.1 monooxygenase 1 Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA). monooxygenase 1;(source:Araport11) Ipc14G0015200 AT4G15760.1 monooxygenase 1 Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA). monooxygenase 1;(source:Araport11) Ipc14G0015190 AT2G21120.1 Protein of unknown function (DUF803) Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis. magnesium transporter, putative (DUF803);(source:Araport11) Ipc14G0015180 AT1G71870.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc14G0015170 AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc14G0015160 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc14G0015150 AT5G43100.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0015140 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc14G0015130 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc14G0015120 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc14G0015110 AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0015100 AT3G10310.1 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc14G0015090 AT5G12220.1 las1-like family protein 0 las1-like family protein;(source:Araport11) Ipc14G0015080 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc14G0015070 AT5G45320.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc14G0015060 AT1G31720.2 0 0 chitin synthase, putative (DUF1218);(source:Araport11) Ipc14G0015050 AT1G31730.1 Adaptin family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Adaptin family protein;(source:Araport11) Ipc14G0015040 AT5G59845.1 Gibberellin-regulated family protein Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall. Gibberellin-regulated family protein;(source:Araport11) Ipc14G0015030 AT4G19230.1 cytochrome P450, family 707, subfamily A, polypeptide 1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. cytochrome P450, family 707, subfamily A, polypeptide 1;(source:Araport11) Ipc14G0015020 AT4G19220.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0015010 AT1G24650.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0015000 AT4G19210.1 RNAse l inhibitor protein 2 member of RLI subfamily The mRNA is cell-to-cell mobile. RNAse l inhibitor protein 2;(source:Araport11) Ipc14G0014990 AT4G23470.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc14G0014980 AT5G48870.1 Small nuclear ribonucleoprotein family protein SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc14G0014970 AT2G35605.1 SWIB/MDM2 domain superfamily protein 0 SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc14G0014960 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc14G0014950 AT5G01960.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0014940 AT3G23640.3 0 0 heteroglycan glucosidase 1;(source:Araport11) Ipc14G0014930 AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0014920 AT1G32350.1 alternative oxidase 1D 0 alternative oxidase 1D;(source:Araport11) Ipc14G0014910 AT3G45900.1 Ribonuclease P protein subunit P38-related 0 Ribonuclease P protein subunit P38-like protein;(source:Araport11) Ipc14G0014900 AT1G31812.1 acyl-CoA-binding protein 6 Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases. acyl-CoA-binding protein 6;(source:Araport11) Ipc14G0014890 AT1G31830.2 Amino acid permease family protein Encodes POLYAMINE UPTAKE TRANSPORTER 2, an amino acid permease family protein. Amino acid permease family protein;(source:Araport11) Ipc14G0014880 AT4G38150.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0014870 AT4G19150.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc14G0014860 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc14G0014850 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc14G0014840 AT2G44230.1 Plant protein of unknown function (DUF946) 0 hypothetical protein (DUF946);(source:Araport11) Ipc14G0014830 AT5G23535.2 0 0 KOW domain-containing protein;(source:Araport11) Ipc14G0014820 AT5G45410.5 0 Plastid localized protein of unknown function. Mutants are more susceptible to P. syringae and produce less callose upon infection. zinc finger B-box protein;(source:Araport11) Ipc14G0014810 AT4G19120.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0014800 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0014790 AT3G50940.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0014780 AT4G05440.1 temperature sensing protein-related Plays a role in pollen development and modulating DNA replication via interaction with MCM4 and MCM7 of the pre-replication complex. temperature sensing protein-like protein;(source:Araport11) Ipc14G0014760 AT4G19110.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0014770 AT1G11940.2 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc14G0014750 AT1G31880.2 0 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with PAX, thereby timing PPSE differentiation. Dampens PIN-mediated auxin efflux. DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein;(source:Araport11) Ipc14G0014740 AT5G45550.1 Mob1/phocein family protein Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling. Mob1/phocein family protein;(source:Araport11) Ipc14G0014730 AT2G15490.1 UDP-glycosyltransferase 73B4 0 UDP-glycosyltransferase 73B4;(source:Araport11) Ipc14G0014720 AT1G32100.1 pinoresinol reductase 1 Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. pinoresinol reductase 1;(source:Araport11) Ipc14G0014710 AT1G80480.1 plastid transcriptionally active 17 0 plastid transcriptionally active 17;(source:Araport11) Ipc14G0014700 AT3G48660.1 Protein of unknown function (DUF 3339) 0 transmembrane protein, putative (DUF 3339);(source:Araport11) Ipc14G0014690 AT2G17900.1 SET domain group 37 Homology Subgroup S-ET - Protein containing an interrupted SET domain. SET domain group 37;(source:Araport11) Ipc14G0014680 AT1G75710.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc14G0014670 AT1G09070.1 soybean gene regulated by cold-2 SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting. The mRNA is cell-to-cell mobile. soybean gene regulated by cold-2;(source:Araport11) Ipc14G0014660 AT1G77710.1 0 0 ubiquitin-fold modifier;(source:Araport11) Ipc14G0014650 AT1G38131.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc14G0014640 AT5G18410.2 transcription activators distorted trichomes and exhibits a diffuse actin cytoskeleton transcription activator;(source:Araport11) Ipc14G0014630 AT1G77700.2 0 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc14G0014620 AT2G21050.1 like AUXIN RESISTANT 2 Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization. like AUXIN RESISTANT 2;(source:Araport11) Ipc14G0014610 AT4G19210.1 RNAse l inhibitor protein 2 member of RLI subfamily The mRNA is cell-to-cell mobile. RNAse l inhibitor protein 2;(source:Araport11) Ipc14G0014600 AT5G35695.1 0 0 nuclease HARBI1-like protein;(source:Araport11) Ipc14G0014590 AT4G29060.1 elongation factor Ts family protein 0 elongation factor Ts family protein;(source:Araport11) Ipc14G0014580 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc14G0014570 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc14G0014560 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc14G0014550 AT1G77680.1 Ribonuclease II/R family protein 0 Ribonuclease II/R family protein;(source:Araport11) Ipc14G0014540 AT4G03520.1 Thioredoxin superfamily protein Encodes a redox activated co-chaperone, chloroplast localized thioredoxin, similar to prokaryotic types. Thioredoxin superfamily protein;(source:Araport11) Ipc14G0014530 AT1G21710.1 8-oxoguanine-DNA glycosylase 1 Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme. 8-oxoguanine-DNA glycosylase 1;(source:Araport11) Ipc14G0014520 AT1G77410.1 beta-galactosidase 16 0 beta-galactosidase 16;(source:Araport11) Ipc14G0014510 AT1G44446.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein;(source:Araport11) Ipc14G0014500 AT3G61220.1 NAD(P)-binding Rossmann-fold superfamily protein CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc14G0014490 AT1G21750.1 PDI-like 1-1 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. The mRNA is cell-to-cell mobile. PDI-like 1-1;(source:Araport11) Ipc14G0014480 AT1G77490.1 thylakoidal ascorbate peroxidase Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. thylakoidal ascorbate peroxidase;(source:Araport11) Ipc14G0014460 AT2G43640.2 Signal recognition particle, SRP9/SRP14 subunit 0 Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11) Ipc14G0014470 AT1G80830.2 0 Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants. natural resistance-associated macrophage protein 1;(source:Araport11) Ipc14G0014450 AT1G77610.1 EamA-like transporter family protein 0 EamA-like transporter family protein;(source:Araport11) Ipc14G0014440 AT4G08330.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0014430 AT1G77600.1 ARM repeat superfamily protein One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. ARM repeat superfamily protein;(source:Araport11) Ipc14G0014420 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0014410 AT1G77660.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc14G0014400 AT1G77670.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc14G0014390 AT4G08240.2 0 0 histone-lysine N-methyltransferase;(source:Araport11) Ipc14G0014380 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0014370 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0014360 #N/A #N/A #N/A #N/A Ipc14G0014350 AT5G11080.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc14G0014340 AT3G42150.3 0 0 transmembrane protein;(source:Araport11) Ipc14G0014330 AT4G25940.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc14G0014320 AT3G17800.1 Protein of unknown function (DUF760) mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem alanine-tRNA ligase, putative (DUF760);(source:Araport11) Ipc14G0014310 AT4G26020.3 0 0 4/1 protein short form protein;(source:Araport11) Ipc14G0014300 AT5G57123.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0014290 #N/A #N/A #N/A #N/A Ipc14G0014280 AT1G64550.1 general control non-repressible 3 Encodes a member of GCN subfamily. Predicted to be involved in stress-associated protein translation control. The mutant is affected in MAMP ((microbe-associated molecular patterns)-induced stomatal closure, but not other MAMP-induced responses in the leaves. general control non-repressible 3;(source:Araport11) Ipc14G0014270 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc14G0014260 AT5G44740.2 Y-family DNA polymerase H Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif. Y-family DNA polymerase H;(source:Araport11) Ipc14G0014250 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0014240 AT4G29890.1 choline monooxygenase, putative (CMO-like) 0 choline monooxygenase, putative (CMO-like);(source:Araport11) Ipc14G0014230 AT5G05810.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0014220 AT1G56130.3 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc14G0014210 AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc14G0014200 AT2G04340.1 0 0 cytoplasmic dynein 2 light intermediate chain;(source:Araport11) Ipc14G0014190 AT2G04360.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0014180 AT2G18950.1 homogentisate phytyltransferase 1 Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading. homogentisate phytyltransferase 1;(source:Araport11) Ipc14G0014170 AT4G30190.1 H(+)-ATPase 2 Belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal domain. Its plasma membrane localization is light-dependent. H[+]-ATPase 2;(source:Araport11) Ipc14G0014160 AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf106 0 Bacterial sec-independent translocation protein mttA/Hcf106;(source:Araport11) Ipc14G0014150 AT3G52080.1 cation/hydrogen exchanger 28 encodes a cation:proton exchanger expressed in pollen cation/hydrogen exchanger 28;(source:Araport11) Ipc14G0014140 AT3G52080.1 cation/hydrogen exchanger 28 encodes a cation:proton exchanger expressed in pollen cation/hydrogen exchanger 28;(source:Araport11) Ipc14G0014130 AT5G08470.1 peroxisome 1 an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. peroxisome 1;(source:Araport11) Ipc14G0014120 AT2G18890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0014110 AT5G57390.1 AINTEGUMENTA-like 5 Encodes a member of the AP2 family of transcriptional regulators. May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants. Overexpression results in the formation of somatic embryos on cotyledons. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Acts redundantly with PLT3 and 7 in lateral root pattern formation. AINTEGUMENTA-like 5;(source:Araport11) Ipc14G0014100 AT2G34900.1 Transcription factor GTE6 Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. Transcription factor GTE6;(source:Araport11) Ipc14G0014090 AT5G57480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0014080 AT2G18850.1 SET domain-containing protein 0 SET domain-containing protein;(source:Araport11) Ipc14G0014070 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0014060 AT3G54826.1 Zim17-type zinc finger protein 0 Zim17-type zinc finger protein;(source:Araport11) Ipc14G0014050 AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain Encodes a homologue of spliceosome disassembly factor NTR1. Required for correct expression and splicing of DOG1, a regulator of seed dormancy. The mRNA is cell-to-cell mobile. GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein;(source:Araport11) Ipc14G0014040 AT3G07050.1 GTP-binding family protein Arabidopsis NSN1 encodes a nucleolar GTP- binding protein and is required for maintenance of inflorescence meristem identity and floral organ development. GTP-binding family protein;(source:Araport11) Ipc14G0014030 AT4G30240.1 Syntaxin/t-SNARE family protein 0 Syntaxin/t-SNARE family protein;(source:Araport11) Ipc14G0014020 AT4G30230.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0014010 AT5G57500.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc14G0014000 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc14G0013990 AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli. Xyloglucan endotransglucosylase/hydrolase family protein;(source:Araport11) Ipc14G0013980 #N/A #N/A #N/A #N/A Ipc14G0013970 AT4G35375.1 0 0 exodeoxyribonuclease VII, small subunit;(source:Araport11) Ipc14G0013960 AT4G30310.2 FGGY family of carbohydrate kinase 0 FGGY family of carbohydrate kinase;(source:Araport11) Ipc14G0013950 AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc14G0013940 AT5G58860.1 cytochrome P450, family 86, subfamily A, polypeptide 1 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue. cytochrome P450, family 86, subfamily A, polypeptide 1;(source:Araport11) Ipc14G0013930 AT3G23660.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc14G0013920 AT1G14730.1 Cytochrome b561/ferric reductase transmembrane protein family 0 Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc14G0013910 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0013900 AT1G05560.2 0 A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UDP-glucosyltransferase 75B1;(source:Araport11) Ipc14G0013890 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0013880 AT4G14090.1 UDP-Glycosyltransferase superfamily protein The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0013870 AT4G14050.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0013860 AT4G14010.1 ralf-like 32 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 32;(source:Araport11) Ipc14G0013850 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc14G0013840 AT4G14000.1 Putative methyltransferase family protein 0 Putative methyltransferase family protein;(source:Araport11) Ipc14G0013830 AT2G30080.1 ZIP metal ion transporter family member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess. ZIP metal ion transporter family;(source:Araport11) Ipc14G0013820 AT4G13950.1 ralf-like 31 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 31;(source:Araport11) Ipc14G0013810 AT3G23810.1 S-adenosyl-l-homocysteine (SAH) hydrolase 2 0 S-adenosyl-l-homocysteine (SAH) hydrolase 2;(source:Araport11) Ipc14G0013800 AT1G11900.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0013790 AT1G47980.1 0 0 desiccation-like protein;(source:Araport11) Ipc14G0013780 AT5G54830.1 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein 0 DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein;(source:Araport11) Ipc14G0013770 AT4G13830.2 DNAJ-like 20 DnaJ-like protein (J20); nuclear gene DNAJ-like 20;(source:Araport11) Ipc14G0013760 AT1G34470.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc14G0013750 #N/A #N/A #N/A #N/A Ipc14G0013740 AT2G32810.1 beta galactosidase 9 putative beta-galactosidase beta galactosidase 9;(source:Araport11) Ipc14G0013730 AT3G25070.2 0 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is Primeguarded Prime by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.The mRNA is cell-to-cell mobile. RPM1 interacting protein 4;(source:Araport11) Ipc14G0013720 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc14G0013710 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc14G0013700 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc14G0013690 AT5G27430.1 Signal peptidase subunit 0 Signal peptidase subunit;(source:Araport11) Ipc14G0013680 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc14G0013670 AT1G04920.1 sucrose phosphate synthase 3F Encodes a protein with putative sucrose-phosphate synthase activity. sucrose phosphate synthase 3F;(source:Araport11) Ipc14G0013660 AT3G06930.1 protein arginine methyltransferase 4B Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. protein arginine methyltransferase 4B;(source:Araport11) Ipc14G0013650 AT3G62720.2 xylosyltransferase 1 Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides. xylosyltransferase 1;(source:Araport11) Ipc14G0013640 AT4G15802.1 heat shock factor binding protein Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment. heat shock factor binding protein;(source:Araport11) Ipc14G0013630 AT3G18165.1 modifier of snc1,4 Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity. modifier of snc1,4;(source:Araport11) Ipc14G0013620 AT5G27700.1 Ribosomal protein S21e Cytosolic ribosomal protein. Similar to EVR1 and redundant with EVR1. Also enhances VAR2 mutant varigation, but to a lesser extent than evr1. Ribosomal protein S21e;(source:Araport11) Ipc14G0013610 AT5G10625.1 0 0 flowering-promoting factor-like protein;(source:Araport11) Ipc14G0013600 AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc14G0013590 AT1G77410.1 beta-galactosidase 16 0 beta-galactosidase 16;(source:Araport11) Ipc14G0013580 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0013570 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0013560 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0013550 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0013540 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc14G0013530 AT3G49050.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0013520 AT2G39990.1 eukaryotic translation initiation factor 2 translation initiation factor eIF2 p47 subunit homolog eukaryotic translation initiation factor 2;(source:Araport11) Ipc14G0013510 AT3G26360.2 0 0 Ribosomal protein S21 family protein;(source:Araport11) Ipc14G0013500 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0013490 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0013480 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0013470 AT2G47850.3 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc14G0013460 AT5G18560.1 Integrase-type DNA-binding superfamily protein Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0013450 AT5G18570.1 GTP1/OBG family protein Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis and functions primarily in plastid ribosome biogenesis during chloroplast development. GTP1/OBG family protein;(source:Araport11) Ipc14G0013440 AT5G18580.1 tonneau 2 (TON2) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system. tonneau 2 (TON2);(source:Araport11) Ipc14G0013430 AT5G18600.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc14G0013420 AT5G18600.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc14G0013410 AT5G18600.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc14G0013400 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0013390 AT3G21460.1 Glutaredoxin family protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Glutaredoxin family protein;(source:Araport11) Ipc14G0013380 AT5G18640.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0013370 AT3G24180.2 Beta-glucosidase, GBA2 type family protein 0 Beta-glucosidase, GBA2 type family protein;(source:Araport11) Ipc14G0013360 AT5G60900.1 receptor-like protein kinase 1 Encodes a receptor-like protein kinase. receptor-like protein kinase 1;(source:Araport11) Ipc14G0013340 AT4G13690.1 0 0 RNA-binding protein;(source:Araport11) Ipc14G0013350 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0013330 AT1G09155.1 phloem protein 2-B15 0 phloem protein 2-B15;(source:Araport11) Ipc14G0013320 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc14G0013310 #N/A #N/A #N/A #N/A Ipc14G0013300 AT2G02320.1 phloem protein 2-B7 0 phloem protein 2-B7;(source:Araport11) Ipc14G0013290 AT3G03300.4 0 Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. dicer-like 2;(source:Araport11) Ipc14G0013280 AT3G03300.4 0 Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. dicer-like 2;(source:Araport11) Ipc14G0013270 AT1G63060.1 0 0 ribosome biogenesis NEP1-like protein;(source:Araport11) Ipc14G0013260 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc14G0013250 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0013240 AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0013230 AT5G48870.1 Small nuclear ribonucleoprotein family protein SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc14G0013220 AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3 Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase. peroxisomal 3-ketoacyl-CoA thiolase 3;(source:Araport11) Ipc14G0013210 AT1G04690.1 potassium channel beta subunit 1 0 potassium channel beta subunit 1;(source:Araport11) Ipc14G0013200 AT4G34030.1 3-methylcrotonyl-CoA carboxylase MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. The mRNA is cell-to-cell mobile. 3-methylcrotonyl-CoA carboxylase;(source:Araport11) Ipc14G0013190 AT5G63810.1 beta-galactosidase 10 member of Glycoside Hydrolase Family 35 beta-galactosidase 10;(source:Araport11) Ipc14G0013180 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc01G0027910 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc01G0028080 AT4G26300.1 Arginyl-tRNA synthetase, class Ic 0 Arginyl-tRNA synthetase, class Ic;(source:Araport11) Ipc01G0028090 AT3G05980.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028110 #N/A #N/A #N/A #N/A Ipc01G0028120 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc07G0000970 AT3G06220.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc03G0026190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001000 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc07G0001010 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001020 #N/A #N/A #N/A #N/A Ipc07G0001040 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc07G0001050 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc07G0001060 AT2G02500.2 0 Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity). Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc07G0001070 AT2G02480.2 0 STICHEL mutant shows trichomes with fewer than normal branches. AAA-type ATPase family protein;(source:Araport11) Ipc07G0001080 AT2G02470.1 alfin-like 6 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins that acts as a novel upstream regulator of root hair formation during Pi starvation. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 6;(source:Araport11) Ipc07G0001090 AT2G02450.2 NAC domain containing protein 35 0 NAC domain containing protein 35;(source:Araport11) Ipc07G0001100 AT2G22680.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc07G0001110 AT2G02400.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0001120 AT5G49760.1 Leucine-rich repeat protein kinase family protein Leucine rich receptor kinase. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0001130 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0001140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001150 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc02G0001850 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0001840 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001830 AT3G55010.2 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5) encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR) phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5);(source:Araport11) Ipc02G0001820 #N/A #N/A #N/A #N/A Ipc02G0001810 #N/A #N/A #N/A #N/A Ipc02G0001800 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001790 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001750 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0001760 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc12G0005260 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0005240 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005230 AT3G47500.1 cycling DOF factor 3 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 3;(source:Araport11) Ipc12G0005220 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc12G0005210 AT3G29763.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc12G0005200 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0005190 AT1G48580.1 0 0 nuclear localized protein;(source:Araport11) Ipc12G0005180 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0005170 AT2G35630.2 0 Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity.The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc12G0005160 AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc12G0005150 AT1G79280.2 nuclear pore anchor Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development. nuclear pore anchor;(source:Araport11) Ipc12G0005140 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005060 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005130 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc12G0005120 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005110 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005100 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc12G0005090 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0005080 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0005070 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005050 AT4G26910.1 Dihydrolipoamide succinyltransferase 0 Dihydrolipoamide succinyltransferase;(source:Araport11) Ipc12G0005040 AT1G35660.1 0 0 erythroid differentiation factor-like protein;(source:Araport11) Ipc12G0005030 AT4G28130.1 diacylglycerol kinase 6 0 diacylglycerol kinase 6;(source:Araport11) Ipc12G0005020 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005010 AT1G07870.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0005000 AT3G03260.1 homeodomain GLABROUS 8 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. homeodomain GLABROUS 8;(source:Araport11) Ipc12G0004990 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0004980 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0004970 AT2G47020.3 0 0 Peptide chain release factor 1;(source:Araport11) Ipc12G0004960 AT2G12400.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc12G0004950 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc12G0004940 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0004930 AT4G19570.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc12G0004920 AT1G40129.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0004910 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc12G0004900 AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III Integral chloroplast outer membrane protein. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-III;(source:Araport11) Ipc12G0004890 AT4G00895.1 ATPase, F1 complex, OSCP/delta subunit protein 0 ATPase, F1 complex, OSCP/delta subunit protein;(source:Araport11) Ipc12G0004880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004870 AT1G48570.1 zinc finger (Ran-binding) family protein 0 zinc finger (Ran-binding) family protein;(source:Araport11) Ipc12G0004860 AT3G17940.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc12G0004850 AT1G48550.1 Vacuolar protein sorting-associated protein 26 VPS26C is a component of a retromer complex, it is involved in endosome to lysosome protein transport and root hair growth. Vacuolar protein sorting-associated protein 26;(source:Araport11) Ipc12G0004840 AT3G18020.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0004830 AT2G35380.2 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc12G0004820 AT4G36080.2 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases Component of the SPT module of the SAGA complex. phosphotransferases/inositol or phosphatidylinositol kinase;(source:Araport11) Ipc03G0006050 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc03G0006040 AT2G44065.3 0 0 Ribosomal protein L2 family;(source:Araport11) Ipc03G0006030 AT4G24820.2 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain 0 26S proteasome regulatory subunit Rpn7;(source:Araport11) Ipc03G0006020 AT5G62190.1 DEAD box RNA helicase (PRH75) DEAD/DEAH box RNA helicase PRH75 DEAD box RNA helicase (PRH75);(source:Araport11) Ipc03G0006010 AT4G31340.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc03G0006000 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc03G0005990 AT1G79490.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0005980 AT1G79480.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc03G0005970 AT2G19160.2 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0005960 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc03G0005950 AT5G57250.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0005940 AT2G30230.1 0 0 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc03G0005930 AT5G57240.5 0 0 OSBP(oxysterol binding protein)-related protein 4C;(source:Araport11) Ipc03G0005920 AT2G19170.2 0 Encodes a novel subtilisin-like serine protease. subtilisin-like serine protease 3;(source:Araport11) Ipc03G0005910 AT5G53990.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0005900 AT5G57940.2 cyclic nucleotide gated channel 5 Encodes a cyclic GMP activated Ca2+-permeable cation channel in the plasma membrane of guard cells. cyclic nucleotide gated channel 5;(source:Araport11) Ipc03G0005890 AT4G36380.2 0 Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0005880 AT3G56960.2 0 Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology. phosphatidyl inositol monophosphate 5 kinase 4;(source:Araport11) Ipc03G0005870 AT5G57520.1 zinc finger protein 2 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 2;(source:Araport11) Ipc03G0005860 AT5G57460.1 0 TPLATE complex subunit involved in clathirin mediated endocytosis. muniscin carboxy-terminal mu-like domain protein;(source:Araport11) Ipc03G0005850 AT4G30230.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0005840 AT5G57450.2 homolog of X-ray repair cross complementing 3 (XRCC3) Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation homolog of X-ray repair cross complementing 3 (XRCC3);(source:Araport11) Ipc03G0005830 AT2G18840.1 Integral membrane Yip1 family protein Encodes one of the two YPT/RAB GTPase Interacting Protein 4a (YIP4a) and YIP4b (formerly YIP2), which form a TGN-localized complex with ECHIDNA (ECH). This complex is required for the secretion of cell wall polysaccharides. Integral membrane Yip1 family protein;(source:Araport11) Ipc03G0005820 AT4G16720.1 Ribosomal protein L23/L15e family protein 0 Ribosomal protein L23/L15e family protein;(source:Araport11) Ipc03G0005810 AT5G57510.1 0 0 cotton fiber protein;(source:Araport11) Ipc03G0005800 AT5G57500.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc03G0005790 AT4G30580.1 Phospholipid/glycerol acyltransferase family protein Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal. Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc03G0005780 AT5G57330.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc03G0005770 AT2G24490.2 replicon protein A2 Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1. replicon protein A2;(source:Araport11) Ipc03G0005760 AT2G23940.3 0 0 transmembrane protein (DUF788);(source:Araport11) Ipc03G0005750 AT4G30480.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0005740 #N/A #N/A #N/A #N/A Ipc03G0005730 AT1G52970.1 downregulated in DIF1 11 0 downregulated in DIF1 11;(source:Araport11) Ipc03G0005710 AT1G55540.2 Nuclear pore complex protein 0 Nuclear pore complex protein;(source:Araport11) Ipc03G0005720 AT4G30440.1 UDP-D-glucuronate 4-epimerase 1 Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. UDP-D-glucuronate 4-epimerase 1;(source:Araport11) Ipc03G0005700 AT2G31540.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc03G0005690 AT4G19120.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0005680 AT3G51290.2 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) 0 pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632);(source:Araport11) Ipc03G0005670 AT5G57810.1 tetraspanin15 Member of TETRASPANIN family tetraspanin15;(source:Araport11) Ipc03G0005660 AT2G23810.1 tetraspanin8 Member of TETRASPANIN family tetraspanin8;(source:Araport11) Ipc03G0005650 AT3G57170.1 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein 0 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein;(source:Araport11) Ipc03G0005640 AT4G30420.2 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc03G0005630 AT3G33520.1 actin-related protein 6 Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin. actin-related protein 6;(source:Araport11) Ipc03G0005620 AT5G57770.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 2 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc03G0005610 AT5G57740.1 XB3 ortholog 2 in Arabidopsis thaliana Encodes a RING-type E3 ligase XBAT32. Mediates the proteasomal degradation of the ethylene biosynthetic enzyme, 1-aminocyclopropane-1-carboxylate synthase 7. hypothetical protein;(source:Araport11) Ipc03G0005600 AT3G63430.2 0 0 zinc finger CCCH domain protein;(source:Araport11) Ipc03G0005590 AT3G57520.1 seed imbibition 2 SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2. seed imbibition 2;(source:Araport11) Ipc03G0005580 AT5G57180.2 chloroplast import apparatus 2 Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast. chloroplast import apparatus 2;(source:Araport11) Ipc03G0005570 AT3G06730.1 Thioredoxin z Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets. Thioredoxin z;(source:Araport11) Ipc03G0005560 AT5G57140.1 purple acid phosphatase 28 0 purple acid phosphatase 28;(source:Araport11) Ipc03G0005550 AT4G29920.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Loss of function mutants show increased sensitivity to salt stress and drought. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0005540 AT5G17900.1 microfibrillar-associated protein-related 0 microfibrillar-associated protein-like protein;(source:Araport11) Ipc03G0005530 AT5G07660.1 structural maintenance of chromosomes 6A Encodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. structural maintenance of chromosomes 6A;(source:Araport11) Ipc03G0005520 AT5G20500.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc03G0005510 AT4G30210.2 P450 reductase 2 Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. The mRNA is cell-to-cell mobile. P450 reductase 2;(source:Araport11) Ipc03G0005500 AT4G29950.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc03G0005490 AT4G19640.2 0 Encodes Ara7. Ras-related small GTP-binding family protein;(source:Araport11) Ipc03G0005480 AT5G57090.1 Auxin efflux carrier family protein Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation results in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Membrane sterol composition is essential for the acquisition of PIN2 polarity. Its expression is downregulated at hypoxic conditions. RAP2.12 overexpression inhibits this downregulation. Auxin efflux carrier family protein;(source:Araport11) Ipc03G0005470 AT5G55950.1 Nucleotide/sugar transporter family protein 0 Nucleotide/sugar transporter family protein;(source:Araport11) Ipc03G0005460 AT5G20590.1 TRICHOME BIREFRINGENCE-LIKE 5 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 5;(source:Araport11) Ipc03G0005450 AT4G30190.1 H(+)-ATPase 2 Belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal domain. Its plasma membrane localization is light-dependent. H[+]-ATPase 2;(source:Araport11) Ipc03G0005440 AT4G28020.1 0 0 tRNA-thr(GGU) m(6)t(6)A37 methyltransferase;(source:Araport11) Ipc03G0005430 AT2G18910.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0005420 AT5G16300.1 Vps51/Vps67 family (components of vesicular transport) protein 0 Vps51/Vps67 family (components of vesicular transport) protein;(source:Araport11) Ipc03G0005410 AT2G19330.1 plant intracellular ras group-related LRR 6 Encodes PIRL6, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. plant intracellular ras group-related LRR 6;(source:Araport11) Ipc03G0005400 AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0005390 AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc03G0005380 AT4G30160.4 0 Encodes a major actin filament bundling protein that is involved in root hair growth through regulating actin organization in a Ca2+-dependent manner. villin 4;(source:Araport11) Ipc03G0005370 AT3G59310.1 Eukaryotic protein of unknown function (DUF914) 0 solute carrier family 35 protein (DUF914);(source:Araport11) Ipc03G0005360 AT4G29900.2 0 one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain. autoinhibited Ca(2+)-ATPase 10;(source:Araport11) Ipc03G0005350 AT3G51840.1 acyl-CoA oxidase 4 Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis. acyl-CoA oxidase 4;(source:Araport11) Ipc03G0005340 AT1G57610.2 Protein of unknown function (DUF607) 0 calcium uniporter (DUF607);(source:Araport11) Ipc03G0005330 AT3G61620.2 3'-5'-exoribonuclease family protein exonuclease RRP41 (RRP41) 3-5-exoribonuclease family protein;(source:Araport11) Ipc03G0005320 AT4G30825.1 Tetratricopeptide repeat (TPR)-like superfamily protein P-class pentatricopeptide repeat (PPR) protein essential for accumulation of the dicistronic atpH/F transcript in chloroplasts. Acts as barrier to prevent the atpH/F transcript degradation by exoribonucleases by binding to the consensus sequence of the atpF-atpA intergenic region. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0005310 AT2G24100.1 0 0 ATP-dependent DNA helicase;(source:Araport11) Ipc03G0005300 AT3G05100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0005290 AT4G31470.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc03G0005280 AT4G30840.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0005270 AT4G28080.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes REDUCED CHLOROPLAST COVERAGE 2 (REC2). Along with REC1 and REC3 it contributes to establishing the size of the chloroplast compartment. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0005260 AT2G24120.1 DNA/RNA polymerases superfamily protein 0 DNA/RNA polymerases superfamily protein;(source:Araport11) Ipc03G0005250 AT4G29120.1 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc03G0005240 AT2G24130.2 0 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc03G0005230 AT5G57830.1 Protein of unknown function, DUF593 0 zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc03G0005220 AT5G64330.1 Phototropic-responsive NPH3 family protein Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc03G0005210 AT4G30710.3 0 0 QWRF motif protein (DUF566);(source:Araport11) Ipc03G0005200 AT1G69210.1 Uncharacterised protein family UPF0090 0 Uncharacterized protein family UPF0090;(source:Araport11) Ipc03G0005190 AT1G13700.3 0 Encodes a cytosolic 6-phosphogluconolactonase (PGL) thought to be involved in the oxidative pentose-phosphate pathway (OPPP). 6-phosphogluconolactonase 1;(source:Araport11) Ipc03G0005180 AT1G77220.1 Protein of unknown function (DUF300) LAZ1H1 is a DUF300 that is localized to the tonoplast. Along with LAZ1 it appears to play a role in maintaining the structural integrity of vacuoles and regulating BR signaling by modulating downstream subcellular distribution of BAK1. organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc03G0005170 AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11) Ipc03G0005160 AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein involved in mitochondrial RNA editing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0005150 AT5G17420.1 Cellulose synthase family protein Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181). IRX3 is required for secondary cell wall biosynthesis. Cellulose synthase family protein;(source:Araport11) Ipc03G0005140 AT4G30690.1 Translation initiation factor 3 protein SVR9-LIKE1 (SVR9L1) Translation initiation factor 3 protein;(source:Araport11) Ipc03G0005130 AT3G30180.1 brassinosteroid-6-oxidase 2 Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control. brassinosteroid-6-oxidase 2;(source:Araport11) Ipc03G0005120 AT5G57880.1 multipolar spindle 1 Encodes MULTIPOLAR SPINDLE 1 (MPS1), involved in meiotic spindle organization. multipolar spindle 1;(source:Araport11) Ipc03G0005110 AT2G47550.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc03G0005100 AT4G15510.1 Photosystem II reaction center PsbP family protein A nuclear-encoded thylakoid lumenal protein that is associated with photosystem I (PSI) but is not an integral subunit of PSI. It is an PSI assembly factor that assists the proper folding and integration of PsaB and PsaA into the thylakoid membrane. It is involved in the assembly of PSI reaction center heterodimer core. Photosystem II reaction center PsbP family protein;(source:Araport11) Ipc03G0005090 AT5G46650.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0005080 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0005070 AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase;(source:Araport11) Ipc03G0005060 AT4G28088.1 Low temperature and salt responsive protein family 0 Low temperature and salt responsive protein family;(source:Araport11) Ipc03G0005050 AT2G19380.1 RNA recognition motif (RRM)-containing protein 0 RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc03G0005040 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0005030 AT3G49060.1 U-box domain-containing protein kinase family protein 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc03G0005020 AT5G24740.1 Protein of unknown function (DUF1162) Encodes a vacuolar sorting protein that interacts with the plant-specific GRAS family transcription factor SHORT-ROOT and acts in a pathway that controls root growth and radial patterning. It provides a connections between gibberellic acid, SHR and PLT signaling in the root. vacuolar protein sorting-associated protein, putative (DUF1162);(source:Araport11) Ipc03G0005010 AT2G17220.2 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc03G0005000 AT4G25610.3 0 0 C2H2-like zinc finger protein;(source:Araport11) Ipc03G0004990 AT5G52420.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0004980 AT3G61415.2 SKP1-like 21 0 SKP1-like 21;(source:Araport11) Ipc03G0004970 AT4G23420.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc03G0004960 AT1G63700.2 0 Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. Protein kinase superfamily protein;(source:Araport11) Ipc03G0004950 AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc03G0004940 AT1G70600.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc03G0004930 AT5G52430.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0004920 AT5G23940.1 HXXXD-type acyl-transferase family protein Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc03G0004910 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0004900 AT3G49070.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc03G0004890 AT3G29763.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc03G0004880 AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain 0 TTF-type zinc finger protein with HAT dimerization domain-containing protein;(source:Araport11) Ipc03G0004870 AT5G23950.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0004860 AT4G25630.1 fibrillarin 2 encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. The mRNA is cell-to-cell mobile. fibrillarin 2;(source:Araport11) Ipc03G0004850 AT4G18600.3 0 Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments. SCAR family protein;(source:Araport11) Ipc03G0004840 AT5G61780.1 TUDOR-SN protein 2 Involved in the regulation of AtGA20ox3 expression, as well as seed germination. The mRNA is cell-to-cell mobile. TUDOR-SN protein 2;(source:Araport11) Ipc03G0004830 AT1G76690.1 12-oxophytodienoate reductase 2 Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2;(source:Araport11) Ipc03G0004820 AT1G76680.1 12-oxophytodienoate reductase 1 Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1;(source:Araport11) Ipc03G0004810 AT5G12360.2 0 Encodes a protein that protects meiotic centromere cohesion. hypothetical protein;(source:Araport11) Ipc03G0004800 AT5G52470.1 fibrillarin 1 Encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. fibrillarin 1;(source:Araport11) Ipc03G0004790 AT1G19835.6 0 TCS1 encodes a coiled-coil domain protein that binds to microtubules and co-localizes with the cortical microtubules. Mutants have defects in trichome branching and hypocotyl elongation. TCS1 interacts with ZWI and appears to be involved in microtubule assembly. filament-like protein (DUF869);(source:Araport11) Ipc03G0004780 AT5G52520.1 Class II aaRS and biotin synthetases superfamily protein Encodes a chloroplast and mitochondria localized prolyl-tRNA synthetase. Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc03G0004770 AT1G01580.1 ferric reduction oxidase 2 Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. ferric reduction oxidase 2;(source:Araport11) Ipc03G0004760 AT5G52540.1 Protein of unknown function (DUF819) 0 keratin-associated protein, putative (DUF819);(source:Araport11) Ipc03G0004750 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0004740 AT4G25660.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc03G0004730 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc03G0004720 AT5G52660.2 Homeodomain-like superfamily protein Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0004710 AT4G25720.1 glutaminyl cyclase This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model. glutaminyl cyclase;(source:Araport11) Ipc03G0004700 AT3G61490.3 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0004690 AT5G52740.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc03G0004680 AT5G52790.4 0 0 CBS domain protein with a domain protein (DUF21);(source:Araport11) Ipc03G0004670 AT5G52800.3 DNA primases primase/polymerase protein DNA primase;(source:Araport11) Ipc03G0004660 AT5G24060.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0004650 AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0004640 AT5G62650.1 Tic22-like family protein 0 Tic22-like family protein;(source:Araport11) Ipc03G0004630 AT5G52840.1 NADH-ubiquinone oxidoreductase-related 0 NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc03G0004620 AT4G11220.1 VIRB2-interacting protein 2 0 VIRB2-interacting protein 2;(source:Araport11) Ipc03G0004610 AT5G52880.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc03G0004600 AT4G28000.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0004590 AT2G31510.3 0 0 IBR domain-containing protein;(source:Araport11) Ipc03G0004580 AT2G31510.3 0 0 IBR domain-containing protein;(source:Araport11) Ipc03G0004570 AT5G24030.1 SLAC1 homologue 3 Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. SLAC1 homologue 3;(source:Araport11) Ipc03G0004560 AT1G44224.1 ECA1 gametogenesis related family protein Encodes a ECA1 gametogenesis related family protein ECA1 gametogenesis related family protein;(source:Araport11) Ipc03G0004550 AT1G70150.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc03G0004540 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc03G0004530 AT5G52900.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc03G0004520 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc03G0004510 ATCG00540.1 photosynthetic electron transfer A Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. photosynthetic electron transfer A;(source:Araport11) Ipc03G0004500 AT3G49660.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc03G0004490 AT5G52920.1 plastidic pyruvate kinase beta subunit 1 encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content. The mRNA is cell-to-cell mobile. plastidic pyruvate kinase beta subunit 1;(source:Araport11) Ipc03G0004480 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0004470 AT5G52950.1 0 0 LIM domain protein;(source:Araport11) Ipc03G0004460 AT3G59140.1 multidrug resistance-associated protein 14 member of MRP subfamily multidrug resistance-associated protein 14;(source:Araport11) Ipc03G0004450 AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein 0 Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11) Ipc03G0004440 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0004430 AT5G53310.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc03G0004420 AT1G66920.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0004410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0004400 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc03G0004390 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0004380 AT5G37780.4 0 encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness. calmodulin 1;(source:Araport11) Ipc03G0004370 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc03G0004360 AT1G63880.2 0 Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.The mRNA is cell-to-cell mobile. Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc03G0004350 AT5G53280.1 plastid division1 An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site. The mRNA is cell-to-cell mobile. plastid division1;(source:Araport11) Ipc03G0004340 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0004330 AT1G66910.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0004320 AT5G38280.1 PR5-like receptor kinase putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase PR5-like receptor kinase;(source:Araport11) Ipc03G0004310 AT5G54165.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc03G0004300 AT3G61640.1 arabinogalactan protein 20 0 arabinogalactan protein 20;(source:Araport11) Ipc03G0004290 AT5G53220.7 0 0 hypothetical protein;(source:Araport11) Ipc03G0004280 AT4G11070.1 WRKY family transcription factor member of WRKY Transcription Factor; Group III WRKY family transcription factor;(source:Araport11) Ipc03G0004270 AT5G53160.2 regulatory components of ABA receptor 3 Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile. regulatory components of ABA receptor 3;(source:Araport11) Ipc03G0004260 AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc03G0004250 AT5G53150.4 0 0 DnaJ heat shock amino-terminal domain protein;(source:Araport11) Ipc03G0004240 AT5G53140.2 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc03G0004230 AT5G53130.1 cyclic nucleotide gated channel 1 member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1;(source:Araport11) Ipc03G0004220 AT2G29380.1 highly ABA-induced PP2C gene 3 0 highly ABA-induced PP2C protein 3;(source:Araport11) Ipc03G0004210 AT5G39030.1 Protein kinase superfamily protein Involved in growth adaptation upon exposure to metal ions. Contributes together with the other MDS genes to the complex network of CrRLK1Ls that positively and negatively affect growth. Protein kinase superfamily protein;(source:Araport11) Ipc03G0004200 AT1G66920.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0004190 #N/A #N/A #N/A #N/A Ipc03G0004180 AT2G32630.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0004170 AT4G26890.1 mitogen-activated protein kinase kinase kinase 16 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 16;(source:Araport11) Ipc03G0004160 AT5G38250.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc03G0004150 AT5G38250.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc03G0004140 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc03G0004130 AT1G66920.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0004120 AT5G53460.3 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase The mRNA is cell-to-cell mobile. NADH-dependent glutamate synthase 1;(source:Araport11) Ipc03G0004110 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0004100 AT5G24170.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc03G0004090 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0004080 AT5G06160.1 splicing factor-related Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes. splicing factor-like protein;(source:Araport11) Ipc03G0004070 AT5G53430.1 SET domain group 29 Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. SET domain group 29;(source:Araport11) Ipc03G0004060 AT5G53420.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc13G0017310 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010780 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc14G0000590 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000600 AT2G35730.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc14G0000610 AT4G16535.1 0 0 leukocyte receptor cluster-like protein;(source:Araport11) Ipc14G0000620 AT2G35736.2 0 0 hypothetical protein;(source:Araport11) Ipc14G0000630 AT4G00150.1 GRAS family transcription factor Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization. GRAS family transcription factor;(source:Araport11) Ipc14G0000640 #N/A #N/A #N/A #N/A Ipc14G0000650 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0000660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000670 AT4G16520.2 Ubiquitin-like superfamily protein Autophagy protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc14G0000680 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc14G0000690 AT4G16515.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc14G0000700 AT5G57920.3 0 0 early nodulin-like protein 10;(source:Araport11) Ipc14G0000710 AT3G10140.1 RECA homolog 3 Encodes a gene involved in plant mitochondrial recombination surveillance. Disruption of this gene in combination with a mutation in MSH1 results in extensive rearrangement of the mitochondrial genome and dramatic changes in plant growth. RECA homolog 3;(source:Araport11) Ipc14G0000720 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc14G0000730 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc04G0002740 AT2G32440.2 ent-kaurenoic acid hydroxylase 2 ent-kaurenoic acid hydroxylase (KAO2) ent-kaurenoic acid hydroxylase 2;(source:Araport11) Ipc04G0002750 AT1G71820.1 SEC6 Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. SEC6;(source:Araport11) Ipc04G0002760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002780 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0002790 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc04G0002800 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0002810 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc04G0002820 AT4G17140.1 pleckstrin homology (PH) domain-containing protein 0 pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc04G0002830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002840 #N/A #N/A #N/A #N/A Ipc04G0002850 AT1G24310.1 0 0 nuclear pore complex protein;(source:Araport11) Ipc04G0002860 AT2G34750.1 RNA polymerase I specific transcription initiation factor RRN3 protein 0 RNA polymerase I specific transcription initiation factor RRN3 protein;(source:Araport11) Ipc04G0002870 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0002880 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0002890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002900 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc04G0002910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002920 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0002930 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002940 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002950 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0024310 AT4G16060.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0024320 AT3G16810.1 pumilio 24 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 24;(source:Araport11) Ipc01G0024330 AT3G56891.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc01G0024340 AT5G27930.2 Protein phosphatase 2C family protein EGR2 functions as a negative regulator of plant growth with prominent effect on plant growth during drought stress. EGR2 regulates microtubule organization and likely affects additional cytoskeleton and trafficking processes along the plasma membrane. Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0024350 AT1G56260.2 0 Required for the maintenance of stem cells through a reduction in DNA damage. telomere-capping, CST complex subunit;(source:Araport11) Ipc01G0024360 AT2G45900.3 0 0 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11) Ipc01G0024370 AT3G16785.1 phospholipase D P1 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation. phospholipase D P1;(source:Araport11) Ipc01G0024380 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0024390 AT3G06790.2 plastid developmental protein DAG, putative Encodes a protein involved in RNA editing in mitochondria. Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. plastid developmental protein DAG;(source:Araport11) Ipc01G0024400 AT5G65410.1 homeobox protein 25 Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.Gain of function of ATHB25 (35S and UBQ10 proomoters) and double loss of function of ATHB25 and ATHB22 increases and decreases, respectively, seed longevity. This phenotype is maternal and related to seed coat alterations. Gain of function increases expression of GA3OX2 and GA4 and GA1 levels. homeobox protein 25;(source:Araport11) Ipc01G0024420 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc01G0024410 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc01G0024430 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc01G0024440 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0024450 AT3G16770.1 ethylene-responsive element binding protein Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3. The mRNA is cell-to-cell mobile. ethylene-responsive element binding protein;(source:Araport11) Ipc01G0024460 AT1G51172.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0024470 #N/A #N/A #N/A #N/A Ipc01G0024480 #N/A #N/A #N/A #N/A Ipc01G0024490 AT3G16760.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0024500 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc01G0024510 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0024520 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024530 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0024540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024550 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc01G0024560 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc01G0024570 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc01G0024580 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024590 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc01G0024600 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0024610 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0024620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024630 AT3G14330.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of psbE. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0024640 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc01G0024650 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc01G0024660 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0016310 AT2G25540.1 cellulose synthase 10 cellulose synthase cellulose synthase A catalytic subunit 3 UDP-forming-like protein;(source:Araport11) Ipc06G0016300 AT3G56860.9 0 encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3 Prime-UTRs and contributing to the stabilization of mRNAs in the nucleus. UBP1-associated protein 2A;(source:Araport11) Ipc06G0016290 AT2G40830.4 0 Encodes an E3 ubiquitin ligase for the GA-receptor GID1 that functions as a negative regulator of GA signaling in seedlings and seeds by inducing ubiquitin-dependent proteolysis of GID1s. Tyr321 phosphorylation of GARU by TAGK2 inactivates GARU. RING-H2 finger C1A;(source:Araport11) Ipc06G0016280 AT3G56850.1 ABA-responsive element binding protein 3 Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation. ABA-responsive element binding protein 3;(source:Araport11) Ipc06G0016270 AT2G26920.1 Ubiquitin-associated/translation elongation factor EF1B protein 0 Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11) Ipc06G0016260 AT5G19485.1 transferases;nucleotidyltransferases 0 transferases/nucleotidyltransferase;(source:Araport11) Ipc06G0016250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0001140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016220 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc06G0016210 AT5G12260.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc06G0016200 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016180 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc06G0016170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016160 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016150 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc06G0016140 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0016130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016120 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc06G0016110 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016100 AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0016090 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0016080 AT2G26780.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0016060 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0016070 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0016050 AT2G26780.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0016040 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0016030 AT5G12180.1 calcium-dependent protein kinase 17 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17;(source:Araport11) Ipc06G0016020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000360 AT3G62010.1 0 0 metal ion-binding protein;(source:Araport11) Ipc14G0000370 AT4G38560.2 Arabidopsis phospholipase-like protein (PEARLI 4) family 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc14G0000380 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc14G0000390 AT4G15640.2 0 0 adenylyl cyclase;(source:Araport11) Ipc14G0000400 AT3G01460.1 methyl-CPG-binding domain 9 Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes. methyl-CPG-binding domain 9;(source:Araport11) Ipc11G0006220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000410 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0000420 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000430 AT1G29470.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0000440 AT4G16570.1 protein arginine methyltransferase 7 0 protein arginine methyltransferase 7;(source:Araport11) Ipc14G0000450 #N/A #N/A #N/A #N/A IpcGene19807 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc06G0000030 AT1G48520.1 GLU-ADT subunit B Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836). GLU-ADT subunit B;(source:Araport11) Ipc06G0000010 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc06G0000750 #N/A #N/A #N/A #N/A Ipc06G0000760 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0000770 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc06G0000780 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc06G0000790 AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0000800 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000820 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000830 AT5G22050.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0000900 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc06G0000850 AT3G22190.4 0 0 IQ-domain 5;(source:Araport11) Ipc06G0000920 AT3G44160.1 Outer membrane OMP85 family protein Encodes a chloroplast-localized Omp85 family member. Members of this family chaperone the membrane insertion of beta-barrel-shaped outer membrane proteins in bacteria, mitochondria and probably chloroplasts and facilitate the transfer of nuclear-encoded cytosolically synthesized preproteins across the outer envelope of chloroplasts. Outer membrane OMP85 family protein;(source:Araport11) Ipc06G0000870 AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2 0 BRI1 suppressor 1 (BSU1)-like 2;(source:Araport11) Ipc06G0000880 AT5G22090.2 Protein of unknown function (DUF3049) EAR1 is a negative regulator of ABA signaling that enhances the activity of all six clade A PP2Cs (ABI1, ABI2, HAB1, HAB2, AHG1, AHG3) by interacting with and releasing the N-terminal autoinhibition of these proteins. EAR1 indirectly affects OST1 activity through enhancing ABI1 activity. The EAR1 141-287 fragment is sufficient for the functioning of EAR1 in ABA responses; the 131-248 region harbors an intrinsically disordered region and only 249-278 can form a predicted regular structure. EAR1 is located in the ER, nuclei, and cytoplasm; ABA signaling promotes the translocation of EAR1 from the ER and/or cytoplasm to the nucleus. Mutations showed that it functions in seed germination, primary root growth, and drought tolerance. FAF-like protein (DUF3049);(source:Araport11) Ipc06G0009310 AT2G07687.1 Cytochrome c oxidase, subunit III 0 Cytochrome c oxidase, subunit III;(source:Araport11) Ipc06G0009320 AT4G01900.1 GLNB1 homolog encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity. nitrogen regulatory P-II-like protein;(source:Araport11) Ipc06G0009330 AT2G47210.3 0 0 myb-like transcription factor family protein;(source:Araport11) Ipc06G0009340 AT1G09320.1 agenet domain-containing protein Heterochromatin-binding protein which can bind to three H3K9me2 tails. Preferentially binds to long TEs. Required for transcriptional silencing, non-CG DNA methylation, and H3K9 dimethylation at some loci. agenet domain-containing protein;(source:Araport11) Ipc06G0009350 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0009360 AT1G49340.2 Phosphatidylinositol 3- and 4-kinase family protein Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots. Phosphatidylinositol 3- and 4-kinase family protein;(source:Araport11) Ipc06G0009370 AT3G12060.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc06G0009380 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0009390 AT2G18470.3 0 Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4;(source:Araport11) Ipc06G0009400 AT2G31400.1 genomes uncoupled 1 Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression. s uncoupled 1;(source:Araport11) Ipc06G0009410 AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 0 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc06G0009420 AT5G26667.4 0 encodes a uridine 5 Prime-monophosphate (UMP)/cytidine 5 Prime-monophosphate (CMP) kinase.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0009430 AT3G04690.1 Malectin/receptor-like protein kinase family protein Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc06G0009440 AT3G62370.1 heme binding 0 heme binding protein;(source:Araport11) Ipc06G0009450 AT4G01995.1 0 0 beta-carotene isomerase D27;(source:Araport11) Ipc06G0009460 AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0009470 AT2G47350.1 HIT zinc finger ;PAPA-1-like conserved region 0 HIT zinc finger and PAPA-1-like domain-containing protein;(source:Araport11) Ipc06G0009480 AT4G02020.1 SET domain-containing protein Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG. SET domain-containing protein;(source:Araport11) Ipc06G0009500 AT3G62420.1 basic region/leucine zipper motif 53 Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene. basic region/leucine zipper motif 53;(source:Araport11) Ipc06G0009490 AT2G47400.1 CP12 domain-containing protein 1 CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. The mRNA is cell-to-cell mobile. CP12 domain-containing protein 1;(source:Araport11) Ipc06G0009510 AT2G47410.5 0 0 WD40 domain-containing protein;(source:Araport11) Ipc06G0009520 AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc06G0009530 AT4G02080.1 secretion-associated RAS super family 2 A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. secretion-associated RAS super family 2;(source:Araport11) Ipc06G0009540 AT4G02090.1 0 0 multidrug resistance protein ABC transporter family protein;(source:Araport11) Ipc06G0009550 AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat 0 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc06G0009560 AT3G62580.1 Late embryogenesis abundant protein (LEA) family protein 0 Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) Ipc06G0009570 AT1G02660.1 alpha/beta-Hydrolases superfamily protein PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0009580 AT3G62600.1 DNAJ heat shock family protein J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity. DNAJ heat shock family protein;(source:Araport11) Ipc06G0009590 AT4G02120.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) Ipc06G0009600 AT5G38700.1 0 0 cotton fiber protein;(source:Araport11) Ipc06G0009610 AT3G06720.2 importin alpha isoform 1 Encodes importin alpha involved in nuclear import. importin alpha isoform 1;(source:Araport11) Ipc06G0009620 AT4G13030.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0009630 AT2G47485.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0009640 AT3G62660.1 galacturonosyltransferase-like 7 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 7;(source:Araport11) Ipc06G0009650 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0009660 AT4G16100.1 Protein of unknown function (DUF789) 0 heat shock protein, putative (DUF789);(source:Araport11) Ipc06G0009670 AT2G47500.1 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc06G0009680 AT3G16850.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0009690 AT2G47510.3 0 Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle. fumarase 1;(source:Araport11) Ipc06G0009700 AT2G47520.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. It plays a role in hypoxia-induced root slanting. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0009710 AT3G55480.1 protein affected trafficking 2 Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles. protein affected traf%26#64257;(source:Araport11) Ipc06G0009720 AT4G02300.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0009730 AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc06G0009740 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc06G0009750 AT3G06860.1 multifunctional protein 2 Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes. The mRNA is cell-to-cell mobile. multifunctional protein 2;(source:Araport11) Ipc06G0009760 AT4G02350.2 0 Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.The mRNA is cell-to-cell mobile. exocyst complex component sec15B;(source:Araport11) Ipc06G0009770 AT1G02816.1 Protein of unknown function, DUF538 0 pectinesterase (Protein of unknown function, DUF538);(source:Araport11) Ipc06G0009780 AT4G02380.1 senescence-associated gene 21 Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses. senescence-associated gene 21;(source:Araport11) Ipc06G0009790 AT3G53760.1 GAMMA-TUBULIN COMPLEX PROTEIN 4 Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization. GAMMA-TUBULIN COMPLEX PROTEIN 4;(source:Araport11) Ipc06G0009800 AT2G47590.1 photolyase/blue-light receptor 2 photolyase/blue light photoreceptor PHR2 (PHR2) mRNA, photolyase/blue-light receptor 2;(source:Araport11) Ipc06G0009810 AT2G47650.1 UDP-xylose synthase 4 encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-xylose synthase 4;(source:Araport11) Ipc06G0009820 AT4G02425.1 0 0 LYR motif protein;(source:Araport11) Ipc06G0009830 AT1G02850.2 beta glucosidase 11 0 beta glucosidase 11;(source:Araport11) Ipc06G0009840 AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc06G0009850 AT4G02680.1 ETO1-like 1 Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5. ETO1-like 1;(source:Araport11) Ipc06G0009860 AT4G02680.1 ETO1-like 1 Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5. ETO1-like 1;(source:Araport11) Ipc06G0009870 AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc06G0009880 AT4G02680.1 ETO1-like 1 Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5. ETO1-like 1;(source:Araport11) Ipc06G0009890 AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc06G0009900 AT1G02860.1 SPX (SYG1/Pho81/XPR1) domain-containing protein Encodes a ubiquitin E3 ligase with RING and SPX domains that is involved in mediating immune responses and mediates degradation of PHT1s at plasma membranes. Targeted by MIR827. Ubiquitinates PHT1;3, PHT1;2, PHT1;1/AtPT1 and PHT1;4/AtPT2. SPX (SYG1/Pho81/XPR1) domain-containing protein;(source:Araport11) Ipc06G0009910 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc06G0009920 AT2G16640.3 0 0 multimeric translocon complex in the outer envelope membrane 132;(source:Araport11) Ipc06G0009930 AT5G27690.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc06G0009940 AT2G27490.4 0 AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. dephospho-CoA kinase family;(source:Araport11) Ipc06G0009950 AT2G47730.2 0 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase phi 8;(source:Araport11) Ipc06G0009960 AT3G50700.1 indeterminate(ID)-domain 2 zinc finger protein, similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2;(source:Araport11) Ipc06G0009970 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc06G0009980 AT1G03000.1 peroxin 6 Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. peroxin 6;(source:Araport11) Ipc06G0009990 AT3G62920.1 0 0 zinc metalloproteinase aureolysin;(source:Araport11) Ipc06G0010000 AT5G18600.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc06G0010010 AT3G62950.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc06G0010020 AT2G47880.1 Glutaredoxin family protein Encodes a member of the CC-type glutaredoxin (ROXY) family. CEPD2 is a non secreted polypeptide that is highly similar to CEPD1 which is another member of a novel family related to glutaredoxins. It is induced by nitrogen starvation. It acts downstream of the CEP1 peptide in systemic N-demand signalling .The RNA is expressed in the phloem of cotelydon and leaf vasculature but the peptide is graft transmissible, traveling from the shoot to the root. Glutaredoxin family protein;(source:Araport11) Ipc06G0010030 AT3G62970.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc06G0010040 AT2G47890.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc06G0010050 AT2G47900.3 tubby like protein 3 Member of plant TLP family which differs in having an F box domain. Plasma membrane tethering is mediated by PIP2 binding domain. Under abiotic stress TLP3 detaches from the PM and translocates to the nucleus. Mutants are insensitive to ABA. tubby like protein 3;(source:Araport11) Ipc06G0010060 AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0010070 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc06G0010080 AT2G32910.1 DCD (Development and Cell Death) domain protein 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc06G0010090 AT4G03115.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc06G0010100 AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0010110 AT3G62990.1 0 0 myelin transcription factor-like protein;(source:Araport11) Ipc06G0010120 AT5G15180.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc06G0010130 AT3G01190.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc06G0010140 AT4G03090.5 0 0 sequence-specific DNA binding transcription factor ATNDX;(source:Araport11) Ipc06G0010150 AT1G07710.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0010160 AT3G63010.1 alpha/beta-Hydrolases superfamily protein Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0010170 AT4G03020.3 0 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc06G0010180 AT1G03440.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0010190 AT1G03430.1 histidine-containing phosphotransfer factor 5 Encodes AHP5, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). histidine-containing phosphotransfer factor 5;(source:Araport11) Ipc06G0010200 AT5G35960.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc06G0010210 AT2G48020.2 Major facilitator superfamily protein Encodes a zinc transporter ZIF2. Expression of ZIF2 is regulated by alternative splicing. Major facilitator superfamily protein;(source:Araport11) Ipc06G0010220 AT1G23160.1 Auxin-responsive GH3 family protein 0 Auxin-responsive GH3 family protein;(source:Araport11) Ipc06G0010230 AT2G48030.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0010240 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0010250 AT3G63030.1 methyl-CPG-binding domain 4 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 4;(source:Araport11) Ipc06G0010260 AT2G48060.2 0 0 piezo-type mechanosensitive ion channel component;(source:Araport11) Ipc06G0010270 AT4G02980.1 endoplasmic reticulum auxin binding protein 1 Auxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2. ABP1 was thought to be embryo lethal but further experimentation has demonstrated that lethality is due to a linked mutation in another gene. endoplasmic reticulum auxin binding protein 1;(source:Araport11) Ipc06G0010290 AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein ALKBH10B is a functional RNA N6-methyladenosine demethylase. Reduction in ALKBH10B decreases m6A levels, and affects the stability of flowering time genes including FT, SPL3 and SPL9. Mutant plants are early flowering. oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) Ipc06G0010280 AT3G06260.1 galacturonosyltransferase-like 4 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 4;(source:Araport11) Ipc06G0010300 AT4G01330.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0010310 AT3G27970.1 Exonuclease family protein 0 Exonuclease family protein;(source:Araport11) Ipc06G0010320 AT3G23590.1 REF4-related 1 Encodes a protein shown to physically associate with the conserved transcriptional coregulatory complex, Mediator, and is involved in the regulation of phenylpropanoid homeostasis. Acts redundantly with REF4/MED5b (At2g48110). Required for expression of some dark-upregulated genes. RFR1 is the MED5a subunit of the mediator complex. REF4-related 1;(source:Araport11) Ipc06G0010330 AT4G02900.4 0 0 ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc06G0010340 AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0010350 AT3G63110.1 isopentenyltransferase 3 Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast. isopentenyltransferase 3;(source:Araport11) Ipc06G0010360 AT4G02860.1 Phenazine biosynthesis PhzC/PhzF protein 0 Phenazine biosynthesis PhzC/PhzF protein;(source:Araport11) Ipc06G0010370 AT4G02840.1 Small nuclear ribonucleoprotein family protein SmD1b is one of two Yeast SmD1 orthologs, the other being SmD1a.SmD1b accumulates to higher levels than SmD1a.It is localized to the nucleolus and nuclear speckles and appears to have a role in RNA splicing and indirectly facilitating PTGS. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc06G0010390 #N/A #N/A #N/A #N/A Ipc06G0010380 AT3G52420.1 outer envelope membrane protein 7 encodes a 7 kDa chloroplast outer envelope membrane protein. outer envelope membrane protein 7;(source:Araport11) Ipc06G0010400 AT2G27310.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0010410 AT5G19160.1 TRICHOME BIREFRINGENCE-LIKE 11 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 11;(source:Araport11) Ipc06G0010420 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc06G0010430 AT5G46600.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc06G0010440 AT4G09820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. It binds the promoter of both AT3G26790 and AT1G28300.TT8 interacts with JAZ proteins to regulate anthocyanin accumulation. TT8 acts maternally to affect seed FA biosynthesis and inhibits seed FA accumulation by down-regulating a group of genes either critical to embryonic development or important in the FA biosynthesis pathway. TT8 represses the activities of LEAFY COTYLEDON1, LEAFY COTYLEDON2, and FUSCA3, the critical transcriptional factors important for seed development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0010450 AT1G03190.2 RAD3-like DNA-binding helicase protein UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response. RAD3-like DNA-binding helicase protein;(source:Araport11) Ipc06G0010460 AT4G02830.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0010470 AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0010480 AT3G63150.1 MIRO-related GTP-ase 2 Encodes a calcium binding GTPases that is localized to the mitochondrion and is involved in salt stress response. MIRO-related GTP-ase 2;(source:Araport11) Ipc06G0010490 AT1G03170.1 Protein of unknown function (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc06G0010500 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc06G0010510 AT4G02790.1 GTP-binding family protein Encodes a GTPase that is targeted to chloroplasts and co-fractionated with chloroplast ribosomes. Mutants are embryo lethal due to this essential function being lost. GTP-binding family protein;(source:Araport11) Ipc06G0010520 AT5G19330.1 ARM repeat protein interacting with ABF2 Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. ARM repeat protein interacting with ABF2;(source:Araport11) Ipc06G0010530 AT5G26330.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc06G0010540 AT5G26330.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc06G0010550 AT3G22380.3 0 Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. Also shown to be invoved in the maintenance of Arabidopsis thaliana metabolic homeostasis. time for coffee;(source:Araport11) Ipc06G0010560 AT1G03140.1 splicing factor Prp18 family protein PRP18a is one of two paralogs (the other being PRP18b) which are highly similar to the step II splicing factors in yeast. Loss of function mutations show defects in alternative splicing, mostly intron retention events. splicing factor Prp18 family protein;(source:Araport11) Ipc06G0010570 AT4G02730.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0010580 AT4G02730.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0010590 AT4G02725.1 0 0 spindle pole body-associated protein;(source:Araport11) Ipc06G0010600 AT5G28150.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc06G0010610 AT4G02720.1 0 Encodes an ortholog of NKAP (NF-kB activating protein), that interacts with splicing and ribosome biogenesis proteins, colocalizes with the 45S rDNA at the nucleolar organizer regions (NORs) and negatively regulates 45S rDNA expression. Ras-induced vulval development antagonist protein;(source:Araport11) Ipc06G0010620 AT5G28060.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc06G0010630 AT5G63720.1 kokopelli Encodes KOKOPELLI (KPL). kokopelli (kpl) mutants display frequent single-fertilization events indicating that KPL is involved in double fertilization. KPL and an inversely transcribed gene, ARIADNE14 (ARI14), which encodes a putative ubiquitin E3 ligase, generate a sperm-specific natural cis-antisense siRNA pair. In the absence of KPL, ARI14 RNA levels in sperm are increased and fertilization is impaired. kokopelli;(source:Araport11) Ipc06G0010640 AT5G36740.5 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc06G0010650 AT4G02715.2 0 0 flocculation FLO11-like protein;(source:Araport11) Ipc06G0010660 AT3G22550.1 Protein of unknown function (DUF581) 0 NAD(P)H-quinone oxidoreductase subunit, putative (DUF581);(source:Araport11) Ipc06G0010670 AT4G09630.1 Protein of unknown function (DUF616) 0 transmembrane protein (DUF616);(source:Araport11) Ipc06G0010680 AT4G09630.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc06G0010690 AT4G09630.1 Protein of unknown function (DUF616) 0 transmembrane protein (DUF616);(source:Araport11) Ipc06G0010700 #N/A #N/A #N/A #N/A Ipc06G0010710 AT1G25275.3 0 Thionin-like gene involved in resistance against the beet cyst nematode (Heterodera schachtii). thionin-like protein;(source:Araport11) Ipc06G0010720 AT2G20619.1 Plant thionin family protein Encodes a Plant thionin family protein Plant thionin family protein;(source:Araport11) Ipc06G0010730 AT3G22640.1 cupin family protein 0 cupin family protein;(source:Araport11) Ipc06G0010740 AT3G22640.1 cupin family protein 0 cupin family protein;(source:Araport11) Ipc06G0010750 AT3G63240.2 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0010760 AT4G04614.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0010770 AT3G51895.1 sulfate transporter 3;1 Encodes a chloroplast-localized sulfate transporter. sulfate transporter 3;(source:Araport11) Ipc06G0010780 AT3G63280.3 0 Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. NIMA-related kinase 4;(source:Araport11) Ipc06G0010790 AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc06G0010800 AT1G03070.3 0 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc06G0010810 AT4G14720.1 TIFY domain/Divergent CCT motif family protein PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc06G0010820 AT4G02680.1 ETO1-like 1 Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5. ETO1-like 1;(source:Araport11) Ipc06G0010830 AT1G03060.2 0 Encodes a WD/BEACH domain protein involved in cell morphogenesis and ribonucleoprotein particle formation. It interacts with the P-body core component DCP2, associates to mRNA processing bodies (P-bodies), and regulates their assembly upon salt stress. BEACH-DOMAIN HOMOLOG A1;(source:Araport11) Ipc06G0010840 AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc06G0010850 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc06G0010860 AT3G54560.2 0 Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z. histone H2A 11;(source:Araport11) Ipc06G0010870 AT4G02620.1 vacuolar ATPase subunit F family protein 0 vacuolar ATPase subunit F family protein;(source:Araport11) Ipc06G0010880 AT3G04730.1 indoleacetic acid-induced protein 16 early auxin-induced (IAA16) indoleacetic acid-induced protein 16;(source:Araport11) Ipc06G0010890 AT1G03030.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0010900 AT3G54650.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc06G0010910 AT5G14050.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0010920 AT3G20420.1 RNAse THREE-like protein 2 double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm. RNAse THREE-like protein 2;(source:Araport11) Ipc06G0010930 AT2G30580.2 0 Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance. DREB2A-interacting protein 2;(source:Araport11) Ipc06G0010940 AT3G49100.2 0 0 Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11) Ipc06G0010950 AT2G30590.1 WRKY DNA-binding protein 21 Encodes WRKY DNA-binding protein 21 (WRKY21). WRKY DNA-binding protein 21;(source:Araport11) Ipc06G0010960 AT2G21070.3 methyltransferases This gene is predicted to an encode a nuclear-localized protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering. methyltransferase;(source:Araport11) Ipc06G0010970 AT2G30620.1 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc06G0010980 AT1G06730.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc06G0010990 AT2G30690.2 0 0 lateral signaling target-like protein (Protein of unknown function, DUF593);(source:Araport11) Ipc06G0011000 AT5G63450.1 cytochrome P450, family 94, subfamily B, polypeptide 1 0 cytochrome P450, family 94, subfamily B, polypeptide 1;(source:Araport11) Ipc06G0011010 AT4G16430.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH3 interacts with JAZ proteins, and functions redundantly with bHLH13, bHLH14 and bHLH17 to negatively regulate jasmonate responses. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0011020 AT4G03030.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0011030 AT1G60985.1 SCR-like 6 Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein). SCR-like 6;(source:Araport11) Ipc06G0011040 AT1G54560.2 0 Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc06G0011050 AT3G09290.1 telomerase activator1 encodes activation factor TAC1 which mediates telomerase activity telomerase activator1;(source:Araport11) Ipc06G0011060 AT3G58170.1 BET1P/SFT1P-like protein 14A Encodes a Bet1/Sft1-like SNARE protein which fully suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). BET1P/SFT1P-like protein 14A;(source:Araport11) Ipc06G0011070 AT3G26550.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc06G0011080 AT2G31320.1 poly(ADP-ribose) polymerase 2 Encodes a poly(ADP-ribose) polymerase. poly(ADP-ribose) polymerase 2;(source:Araport11) Ipc06G0011090 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc06G0011100 AT3G58190.1 lateral organ boundaries-domain 29 This gene contains two auxin-responsive element (AuxRE). lateral organ boundaries-domain 29;(source:Araport11) Ipc06G0011110 AT2G42450.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0011120 AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc06G0011130 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc06G0011140 AT4G14385.1 0 0 histone acetyltransferase subunit NuA4-domain protein;(source:Araport11) Ipc06G0011150 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc06G0011160 AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells. Pre-mRNA splicing Prp18-interacting factor;(source:Araport11) Ipc06G0011170 AT4G14380.1 0 0 cotton fiber protein;(source:Araport11) Ipc06G0011180 AT5G44120.3 RmlC-like cupins superfamily protein Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. RmlC-like cupins superfamily protein;(source:Araport11) Ipc06G0011190 AT5G44120.3 RmlC-like cupins superfamily protein Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. RmlC-like cupins superfamily protein;(source:Araport11) Ipc06G0011200 AT1G06190.1 Rho termination factor Encodes a novel ribonucleic acid-binding protein that interacts with the endonuclease RNase E and supports its function in processing plastid ribonucleic acids. Rho termination factor;(source:Araport11) Ipc06G0011210 AT3G54790.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0011220 AT2G31160.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc06G0011230 AT1G08620.4 0 0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc06G0011240 AT4G28530.1 NAC domain containing protein 74 Member of NAC family of transcription factors. Along with NAC2, KIR1 positively regulates programmed cell death of stigmatic tissue. NAC domain containing protein 74;(source:Araport11) Ipc06G0011250 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc06G0011260 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc06G0011270 AT2G33060.1 receptor like protein 27 0 receptor like protein 27;(source:Araport11) Ipc06G0011280 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc06G0011290 AT2G20470.2 0 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc06G0011300 AT4G28540.1 casein kinase I-like 6 Member of CKL gene family (CKL-C group). casein kinase I-like 6;(source:Araport11) Ipc06G0011310 AT1G03950.1 vacuolar protein sorting-associated protein 2.3 0 vacuolar protein sorting-associated protein 2.3;(source:Araport11) Ipc06G0011320 AT4G27090.1 Ribosomal protein L14 0 Ribosomal protein L14;(source:Araport11) Ipc06G0011330 AT2G33470.2 glycolipid transfer protein 1 0 glycolipid transfer protein 1;(source:Araport11) Ipc06G0011340 AT2G20430.1 ROP-interactive CRIB motif-containing protein 6 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC7 and RIC8 (subfamily group II). Gene is expressed predominantly in inflorescence and flower tissue. ROP-interactive CRIB motif-containing protein 6;(source:Araport11) Ipc06G0011350 AT1G04010.1 phospholipid sterol acyl transferase 1 0 phospholipid sterol acyl transferase 1;(source:Araport11) Ipc06G0011360 AT5G49830.1 exocyst complex component 84B Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. exocyst complex component 84B;(source:Araport11) Ipc06G0011370 AT1G32580.1 plastid developmental protein DAG, putative Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. plastid developmental protein DAG;(source:Araport11) Ipc06G0011380 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc06G0011390 AT5G44010.2 0 0 fanconi anemia group F protein (FANCF);(source:Araport11) Ipc06G0011400 AT3G04400.1 Ribosomal protein L14p/L23e family protein 0 Ribosomal protein L14p/L23e family protein;(source:Araport11) Ipc06G0011410 AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc06G0011420 AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0011430 AT5G43950.1 Plant protein of unknown function (DUF946) 0 vacuolar protein sorting-associated protein (DUF946);(source:Araport11) Ipc06G0011440 AT2G33310.2 auxin-induced protein 13 Auxin induced gene, IAA13 (IAA13). auxin-induced protein 13;(source:Araport11) Ipc06G0011450 AT4G28660.1 photosystem II reaction center PSB28 protein Similar to PsbW subunit of photosystem II. photosystem II reaction center PSB28 protein;(source:Araport11) Ipc06G0011460 AT2G20362.3 0 0 transmembrane protein;(source:Araport11) Ipc06G0011470 AT2G20360.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0011480 AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes an aromatic aldehyde synthase (AtAAS), which catalyzes the in vitro conversion of phenylalanine and 3,4-dihydroxy-L-phenylalanine to phenylacetaldehyde and dopaldehyde, respectively. The mRNA is cell-to-cell mobile. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc06G0011490 AT2G20330.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc06G0011500 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc06G0011510 AT2G20320.2 0 0 DENN (AEX-3) domain-containing protein;(source:Araport11) Ipc06G0011520 AT5G43940.1 GroES-like zinc-binding dehydrogenase family protein Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility. GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc06G0011530 AT4G28703.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc06G0011540 AT5G43900.3 myosin 2 Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2;(source:Araport11) Ipc06G0011550 AT4G28720.1 Flavin-binding monooxygenase family protein Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc06G0011560 AT4G28730.1 Glutaredoxin family protein Encodes a glutaredoxin GrxC5. GrxC5 exists as two forms when expressed in Escherichia coli. The monomeric apoprotein possesses deglutathionylation activity mediating the recycling of plastidial methionine sulfoxide reductase B1 and peroxiredoxin IIE, whereas the dimeric holoprotein incorporates a [2Fe-2S] cluster. Glutaredoxin family protein;(source:Araport11) Ipc06G0011570 AT4G28740.1 0 0 LOW PSII ACCUMULATION-like protein;(source:Araport11) Ipc06G0011580 AT2G20260.1 photosystem I subunit E-2 Encodes subunit E of photosystem I. The mRNA is cell-to-cell mobile. photosystem I subunit E-2;(source:Araport11) Ipc06G0011590 AT2G20230.1 Tetraspanin family protein 0 Tetraspanin family protein;(source:Araport11) Ipc06G0011600 AT4G28780.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc06G0011610 AT4G29040.1 regulatory particle AAA-ATPase 2A RPT2a encodes the 26S proteasome subunit. It is required for root meristem maintenance, and regulates gametogenesis. RPT2a is also shown to regulate gene silencing via DNA methylation. regulatory particle AAA-ATPase 2A;(source:Araport11) Ipc06G0011620 AT3G24660.1 transmembrane kinase-like 1 member of Receptor kinase-like protein family transmembrane kinase-like 1;(source:Araport11) Ipc06G0011630 AT4G13710.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0011640 AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein Encodes KNUCKLES (KNU), a C2H2-type zinc finger protein with a conserved transcriptional repression motif. Mediates the repression of WUS in floral meristem determinacy control. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc06G0011650 AT3G24740.6 0 0 cellulose synthase, putative (DUF1644);(source:Araport11) Ipc06G0011660 AT3G24760.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0011670 AT3G07030.3 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc06G0011680 ATCG00190.1 RNA polymerase subunit beta Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta;(source:Araport11) Ipc06G0011690 ATCG00190.1 RNA polymerase subunit beta Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta;(source:Araport11) Ipc06G0011700 AT3G24840.6 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc06G0011710 AT3G24860.1 Homeodomain-like superfamily protein Trihelix transcription factor induced by osmotic and salt stress. Binds to a conserved AGAG-box sequence in the promoter of genes it regulates. Regulates the expression of stress tolerance genes, resulting in reduced reactive oxygen species, Na+ accumulation, stomatal apertures, lipid peroxidation, cell death and water loss rate, and increased proline content and reactive oxygen species scavenging capability. Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0011720 AT5G42660.1 Protein of unknown function (DUF616) 0 DNA-directed RNA polymerase subunit beta (DUF616);(source:Araport11) Ipc06G0011730 AT3G24880.3 0 Encodes a nuclear localized protein of unknown function that interacts with components of the NuA4 histone acetyltransferase complex. I Helicase/SANT-associated, DNA binding protein;(source:Araport11) Ipc06G0011740 AT3G07150.1 0 0 amino acid-ligase;(source:Araport11) Ipc06G0011750 AT3G25060.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0011760 AT3G25070.2 0 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is Primeguarded Prime by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.The mRNA is cell-to-cell mobile. RPM1 interacting protein 4;(source:Araport11) Ipc06G0011770 AT3G25100.1 cell division cycle 45 Required for normal meiosis, may act in the last round of DNA replication prior to meiosis, sequence similar to yeast CDC45 cell division cycle 45;(source:Araport11) Ipc06G0011780 AT5G48655.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0011790 AT4G13050.1 Acyl-ACP thioesterase 0 Acyl-ACP thioesterase;(source:Araport11) Ipc06G0011800 AT3G07210.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0011810 AT3G07220.1 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc06G0011820 AT3G25120.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc06G0011830 AT3G25140.1 Nucleotide-diphospho-sugar transferases superfamily protein Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content. The mRNA is cell-to-cell mobile. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc06G0011840 AT3G25150.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc06G0011850 AT3G25160.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc06G0011860 AT1G58080.1 ATP phosphoribosyl transferase 1 ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis ATP phosphoribosyl transferase 1;(source:Araport11) Ipc06G0011870 AT3G25160.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc06G0011880 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc06G0011890 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc06G0011900 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc06G0011910 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc06G0011920 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc06G0011930 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc06G0011940 AT3G07270.1 GTP cyclohydrolase I 0 GTP cyclohydrolase I;(source:Araport11) Ipc06G0011950 AT4G13030.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0011960 AT4G13030.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0011970 ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein;(source:Araport11) Ipc06G0011980 AT5G54010.1 UDP-Glycosyltransferase superfamily protein Encodes a flavonoid 3-O-glucoside:2″-O-glucosyltransferase that determines pollen-specific flavonol structure. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0011990 AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein 0 Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc06G0012000 AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein 0 Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc06G0012010 AT3G07320.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc06G0012020 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0012030 AT5G59240.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc06G0012040 AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0012050 AT3G07360.1 plant U-box 9 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 9;(source:Araport11) Ipc06G0012060 AT3G07370.1 carboxyl terminus of HSC70-interacting protein Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. carboxyl terminus of HSC70-interacting protein;(source:Araport11) Ipc06G0012070 AT4G18100.1 Ribosomal protein L32e 0 Ribosomal protein L32e;(source:Araport11) Ipc06G0012080 AT3G07390.1 auxin-responsive family protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. The mRNA is cell-to-cell mobile. auxin-induced in root cultures-like protein;(source:Araport11) Ipc06G0012090 AT3G25290.2 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc06G0012100 AT3G07410.1 RAB GTPase homolog A5B 0 RAB GTPase homolog A5B;(source:Araport11) Ipc06G0012110 AT5G48540.1 receptor-like protein kinase-related family protein 0 receptor-like protein kinase-related family protein;(source:Araport11) Ipc06G0012120 AT5G48540.1 receptor-like protein kinase-related family protein 0 receptor-like protein kinase-related family protein;(source:Araport11) Ipc06G0012130 AT4G12970.1 stomagen Encodes a cysteine-rich peptide, a secretory factor that is produced in the mesophyll cells and acts on the epidermis to increase stomatal formation. Its mature form is a 45-aa peptide with three intramolecular disulfide bonds. It is proposed that STOMAGEN increases stomatal number by competing with two negative regulators of stomatal density, EPF1 and EPF2. STOMAGEN has been shown to compete with EPF2 for binding to the ER and TMM receptor kinases.Binding of STOMAGEN to ER prevents induction of the EPF2-ER MAPK cascade. It's transcript levels change after inducing MUTE expression in a mute background. stomagen;(source:Araport11) Ipc06G0012140 AT3G25400.1 0 0 dCTP pyrophosphatase-like protein;(source:Araport11) Ipc06G0012150 AT2G26470.2 0 0 embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein;(source:Araport11) Ipc06G0012160 AT3G07440.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0012170 AT5G48500.1 0 0 pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein;(source:Araport11) Ipc06G0012180 AT5G48470.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0012190 AT2G43060.1 ILI1 binding bHLH 1 0 ILI1 binding bHLH 1;(source:Araport11) Ipc06G0012200 AT3G25410.1 Sodium Bile acid symporter family 0 Sodium Bile acid symporter family;(source:Araport11) Ipc06G0012210 AT3G07470.3 0 0 transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc06G0012220 AT5G48450.1 SKU5 similar 3 Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein. SKU5 similar 3;(source:Araport11) Ipc06G0012230 AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem. PLAT/LH2 domain-containing lipoxygenase family protein;(source:Araport11) Ipc06G0012240 AT3G07480.1 2Fe-2S ferredoxin-like superfamily protein 0 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc06G0012250 AT1G63940.4 monodehydroascorbate reductase 6 0 monodehydroascorbate reductase 6;(source:Araport11) Ipc06G0012260 AT3G07490.1 ARF-GAP domain 11 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. ARF-GAP domain 11;(source:Araport11) Ipc06G0012270 AT2G43280.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc06G0012280 AT4G12840.2 Protein of unknown function (DUF707) 0 GTPase Der (DUF707);(source:Araport11) Ipc06G0012290 AT3G25470.1 bacterial hemolysin-related 0 bacterial hemolysin-like protein;(source:Araport11) Ipc06G0012300 AT5G48385.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc06G0012310 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc06G0012320 AT2G43820.1 UDP-glucosyltransferase 74F2 Encodes a nicotinate-O-glycosyltransferase. Induced by Salicylic acid, virus, fungus and bacteria. Also involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and anthranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. UDP-glucosyltransferase 74F2;(source:Araport11) Ipc06G0012330 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc06G0012340 AT5G12230.1 0 0 mediator of RNA polymerase II transcription subunit 19a-like protein;(source:Araport11) Ipc06G0012350 AT5G39740.2 ribosomal protein L5 B Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development. ribosomal protein L5 B;(source:Araport11) Ipc06G0012360 AT3G07550.2 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc06G0012370 AT3G07560.1 peroxin 13 Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase. peroxin 13;(source:Araport11) Ipc06G0012380 AT3G07565.1 Protein of unknown function (DUF3755) 0 histone H2A deubiquitinase (DUF3755);(source:Araport11) Ipc06G0012390 AT3G07570.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain 0 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein;(source:Araport11) Ipc06G0012400 AT4G12760.1 0 0 RPA-interacting protein A;(source:Araport11) Ipc06G0012410 AT3G07580.2 0 0 hypothetical protein;(source:Araport11) Ipc06G0012420 AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0012430 AT5G10860.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc06G0012440 AT2G30130.1 Lateral organ boundaries (LOB) domain family protein Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc06G0012450 AT3G08600.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc06G0012460 AT5G58280.3 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc06G0012470 AT1G14320.1 Ribosomal protein L16p/L10e family protein Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself. Ribosomal protein L16p/L10e family protein;(source:Araport11) Ipc06G0012480 AT5G58290.1 regulatory particle triple-A ATPase 3 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, regulatory particle triple-A ATPase 3;(source:Araport11) Ipc06G0012490 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0012500 AT2G30505.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc06G0012510 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc06G0012520 AT5G20920.3 eukaryotic translation initiation factor 2 beta subunit protein synthesis initiation factor eIF2 beta eukaryotic translation initiation factor 2 beta subunit;(source:Araport11) Ipc06G0012530 AT1G55150.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc06G0012540 AT4G28760.2 Protein of unknown function (DUF3741) 0 methyl-coenzyme M reductase II subunit gamma, putative (DUF3741);(source:Araport11) Ipc06G0012550 AT2G30470.1 high-level expression of sugar-inducible gene 2 HSI2 is a member of the ABI3 family of B3 domain proteins and functions as an active repressor of the Spo minimal promoter through the EAR motif. It contains a plant-specific B3 DNA-binding domain. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain. HSI2 is also an epigenetic repressor as it also contains functional plant homeodomain-like (PHD-L) and zinc-finger Cys- and Trp-containing (CW) domains associated with epigenetic regulation. The PHD-L domain of HSI2 is connected to promoting trimethylation of Lys-27 on histone 3 (H3K27me3), while the CW domain can bind directly to H3K4me3. Through these domains, HSI2 represses the seed maturation program during seed germination by repressing transcription of the core LAFL (LEC1, ABI3, FUS3, and LEC2) seed developmental transcriptional regulators. In developing A. thaliana embryos, HSI2 suppresses expression of a large number of genes, many identified as targets of FUS3. However, the absence of HSI2 had no effect on transcript levels of the LAFL regulators and the levels of measured metabolites and phytohormones (ABA, auxin, and JA derivatives) in developing Arabidopsis embryos. HSI2 likely fine-tunes seed maturation by repressing genes involved in early embryogenesis that are not required later for seed maturation and desiccation. B3 domain-containing transcription repressor VAL1;(source:Araport11) Ipc06G0012560 AT1G69530.3 expansin A1 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1;(source:Araport11) Ipc06G0012570 AT3G51620.3 0 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc06G0012580 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc06G0012590 AT2G30395.1 ovate family protein 17 Member of the plant specific ovate protein family of unknown function. ovate family protein 17;(source:Araport11) Ipc06G0012600 AT5G58370.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0012610 AT5G58375.1 Methyltransferase-related protein 0 Methyltransferase-related protein;(source:Araport11) Ipc06G0012620 AT1G06950.1 translocon at the inner envelope membrane of chloroplasts 110 Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis. C-terminal half of Tic110 functions as scaffolds for protein-protein interactions. translocon at the inner envelope membrane of chloroplasts 110;(source:Araport11) Ipc06G0012630 AT2G30300.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc06G0012640 AT1G16870.1 mitochondrial 28S ribosomal protein S29-related 0 mitochondrial 28S ribosomal protein S29-like protein;(source:Araport11) Ipc06G0012650 AT2G38470.1 WRKY DNA-binding protein 33 Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. WRKY DNA-binding protein 33;(source:Araport11) Ipc06G0012660 AT1G06970.1 cation/hydrogen exchanger 14 member of Putative Na+/H+ antiporter family cation/hydrogen exchanger 14;(source:Araport11) Ipc06G0012670 AT2G30230.1 0 0 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc06G0012680 AT1G07020.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0012690 AT2G30170.1 Protein phosphatase 2C family protein Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation. Protein phosphatase 2C family protein;(source:Araport11) Ipc06G0012700 AT2G30160.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc06G0012710 AT2G30140.1 UDP-Glycosyltransferase superfamily protein Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0012720 AT2G30130.1 Lateral organ boundaries (LOB) domain family protein Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc06G0012730 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc06G0012740 AT1G07590.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0012750 AT2G30120.4 0 0 protein FLC EXPRESSOR;(source:Araport11) Ipc06G0012760 AT2G30120.3 0 0 protein FLC EXPRESSOR;(source:Araport11) Ipc06G0012770 AT5G01600.1 ferretin 1 Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ferretin 1;(source:Araport11) Ipc06G0012780 AT5G58530.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc06G0012790 AT5G58510.1 0 0 Rab3 GTPase-activating protein catalytic protein;(source:Araport11) Ipc06G0012800 AT1G07090.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc06G0012810 AT1G07080.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc06G0012820 AT5G58490.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0012830 AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc06G0012840 AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein 0 Ribosomal protein S4 (RPS4A) family protein;(source:Araport11) Ipc06G0012850 AT2G38300.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc06G0012860 AT5G58570.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0012870 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc06G0012880 AT1G07110.1 fructose-2,6-bisphosphatase Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase. fructose-2,6-bisphosphatase;(source:Araport11) Ipc06G0012890 AT1G07120.1 0 0 CHUP1-like protein;(source:Araport11) Ipc06G0012900 AT3G51800.3 metallopeptidase M24 family protein putative nuclear DNA-binding protein G2p (AtG2) mRNA, metallopeptidase M24 family protein;(source:Araport11) Ipc06G0012910 AT3G51800.3 metallopeptidase M24 family protein putative nuclear DNA-binding protein G2p (AtG2) mRNA, metallopeptidase M24 family protein;(source:Araport11) Ipc06G0012920 AT1G07150.1 mitogen-activated protein kinase kinase kinase 13 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 13;(source:Araport11) Ipc06G0012930 AT2G30020.1 Protein phosphatase 2C family protein Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6. Protein phosphatase 2C family protein;(source:Araport11) Ipc06G0012940 AT5G58610.4 0 0 PHD finger transcription factor;(source:Araport11) Ipc06G0012950 AT2G29990.1 alternative NAD(P)H dehydrogenase 2 0 alternative NAD(P)H dehydrogenase 2;(source:Araport11) Ipc06G0012960 AT5G58620.1 zinc finger (CCCH-type) family protein 0 zinc finger (CCCH-type) family protein;(source:Araport11) Ipc06G0012970 AT1G07200.2 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0012980 AT3G55950.1 CRINKLY4 related 3 0 CRINKLY4 related 3;(source:Araport11) Ipc06G0012990 AT3G08510.2 phospholipase C 2 Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol. It is involved in auxin biosynthesis and signaling, modulating development of both male and female gametophytes. It also regulates MAMP-triggered immunity by modulating ROS production. phospholipase C 2;(source:Araport11) Ipc06G0013000 AT5G58700.3 0 0 phosphatidylinositol-speciwc phospholipase C4;(source:Araport11) Ipc06G0013010 AT5G01410.2 0 Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc06G0013020 AT2G29960.3 0 encodes a cyclophilin protein that exhibits peptidylprolyl cis/trans-isomerase and protein refolding activities that were sensitive to cyclosporin A. The protein interacts with GNOM in vitro and is localized to both the cytosolic and membrane fractions. The gene is expressed in the developing embryo. cyclophilin 5;(source:Araport11) Ipc06G0013030 AT5G58720.1 smr (Small MutS Related) domain-containing protein 0 smr (Small MutS Related) domain-containing protein;(source:Araport11) Ipc06G0013040 AT5G58730.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc06G0013050 AT3G51860.1 cation exchanger 3 0 cation exchanger 3;(source:Araport11) Ipc06G0013060 AT2G29940.1 pleiotropic drug resistance 3 0 pleiotropic drug resistance 3;(source:Araport11) Ipc06G0013070 AT3G47160.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0013080 AT5G58800.2 Quinone reductase family protein 0 Quinone reductase family protein;(source:Araport11) Ipc06G0013090 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0013100 AT5G58850.1 myb domain protein 119 Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119). myb domain protein 119;(source:Araport11) Ipc06G0013110 AT2G13650.3 golgi nucleotide sugar transporter 1 Encodes a Golgi-localized GDP-mannose transporter. It can transport ADP-glucose in vitro. golgi nucleotide sugar transporter 1;(source:Araport11) Ipc06G0013120 AT2G29660.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc06G0013130 AT4G01290.1 0 Protein with evolutionarily conserved eIF4E-binding motif in its N-terminal domain that can form mRNA cap?binding complexes and has the potential for regulating gene expression as a translation factor associated plant-specific cell cycle regulator. chorismate synthase;(source:Araport11) Ipc06G0013140 AT3G47070.1 0 0 thylakoid soluble phosphoprotein;(source:Araport11) Ipc06G0013150 AT1G07300.1 josephin protein-related 0 josephin protein-like protein;(source:Araport11) Ipc06G0013160 AT2G29640.1 JOSEPHIN-like protein 0 JOSEPHIN-like protein;(source:Araport11) Ipc06G0013170 AT2G29630.3 thiaminC Encodes a protein involved in thiamin biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine (HMP) or hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. A conserved TPP-binding site is located in the 3 Prime UTR of the At2g29630.2 gene model, and is predicted to function as a riboswitch. The riboswitch controls the formation of transcripts with alternative 3 Prime UTR lengths, which affect mRNA accumulation and protein production. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene. Recessive mutant isolated by Redei. Leaves but not cotyledons white, lethal; restored to normal by thiamine or 2,5-dimethyl-4-aminopyrimidine. thiaminC;(source:Araport11) Ipc06G0013180 AT5G58870.1 FTSH protease 9 encodes an FtsH protease that is localized to the chloroplast FTSH protease 9;(source:Araport11) Ipc06G0013190 AT1G07330.2 0 0 dentin sialophosphoprotein;(source:Araport11) Ipc06G0013200 AT3G47000.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc06G0013210 AT3G47040.3 0 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc06G0013220 AT5G58900.1 Homeodomain-like transcriptional regulator R-R-type MYB protein Homeodomain-like transcriptional regulator;(source:Araport11) Ipc06G0013230 AT5G58960.3 Plant protein of unknown function (DUF641) Mutant plants display impaired light-regulation of the hypocotyl randomization response. glucose-6-phosphate isomerase, putative (DUF641);(source:Araport11) Ipc06G0013240 AT4G37300.1 maternal effect embryo arrest 59 0 maternal effect embryo arrest 59;(source:Araport11) Ipc06G0013250 AT3G46960.1 RNA helicase, ATP-dependent, SK12/DOB1 protein The gene encodes a DExD⁄H box RNA helicase, involved in the regulation of K+ deprivation stress response.SKI2 encodes the RNA helicase subunit of the SKI complex. Mutation of SKI2 leads to production of secondary siRNAs from miRNA target transcripts RNA helicase, ATP-dependent, SK12/DOB1 protein;(source:Araport11) Ipc06G0013260 AT3G46970.1 alpha-glucan phosphorylase 2 Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen. alpha-glucan phosphorylase 2;(source:Araport11) Ipc06G0013270 AT3G46980.3 phosphate transporter 4;3 Encodes an inorganic phosphate transporter (PHT4;3). phosphate transporter 4;(source:Araport11) Ipc06G0013280 AT3G12110.1 actin-11 Encodes an actin that is expressed predominantly during reproductive development. actin-11;(source:Araport11) Ipc06G0013290 AT5G59160.3 type one serine/threonine protein phosphatase 2 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. type one serine/threonine protein phosphatase 2;(source:Araport11) Ipc06G0013300 AT5G59140.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc06G0013310 AT5G64790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc06G0013320 AT5G64790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc06G0013330 AT5G59580.1 UDP-glucosyl transferase 76E1 0 UDP-glucosyl transferase 76E1;(source:Araport11) Ipc06G0013340 AT5G23860.2 tubulin beta 8 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile. tubulin beta 8;(source:Araport11) Ipc06G0013350 AT5G52370.1 0 0 28S ribosomal S34 protein;(source:Araport11) Ipc06G0013360 AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 38;(source:Araport11) Ipc06G0013370 AT3G46780.1 plastid transcriptionally active 16 0 plastid transcriptionally active 16;(source:Araport11) Ipc06G0013380 AT2G29210.2 0 0 splicing factor PWI domain-containing protein;(source:Araport11) Ipc06G0013390 AT3G46740.1 translocon at the outer envelope membrane of chloroplasts 75-III Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts. translocon at the outer envelope membrane of chloroplasts 75-III;(source:Araport11) Ipc06G0013400 AT3G46640.2 Homeodomain-like superfamily protein Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. The mRNA is cell-to-cell mobile. Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0013410 AT2G29180.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0013420 AT2G29200.2 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 1;(source:Araport11) Ipc06G0013430 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc06G0013440 #N/A #N/A #N/A #N/A Ipc06G0013450 AT5G59510.1 ROTUNDIFOLIA like 5 0 ROTUNDIFOLIA like 5;(source:Araport11) Ipc06G0013460 AT2G29060.2 0 0 GRAS family transcription factor;(source:Araport11) Ipc06G0013470 AT4G36560.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0013480 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc06G0013490 AT1G07540.1 TRF-like 2 Arabidopsis thaliana telomere-binding protein, putative (At1g07540) TRF-like 2;(source:Araport11) Ipc06G0013500 AT5G59400.1 0 0 PGR5-like A protein;(source:Araport11) Ipc06G0013510 AT2G32910.1 DCD (Development and Cell Death) domain protein 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc06G0013520 AT5G24910.1 cytochrome P450, family 714, subfamily A, polypeptide 1 Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs. cytochrome P450, family 714, subfamily A, polypeptide 1;(source:Araport11) Ipc06G0013530 AT2G39700.1 expansin A4 putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A4;(source:Araport11) Ipc06G0013540 AT4G31380.1 FPF1-like protein 1 encodes a small protein with unknown function and is similar to flower promoting factor 1. This gene is not expressed in apical meristem after floral induction but is expressed in roots, flowers, and in low abundance, leaves. flowering-promoting factor-like protein;(source:Araport11) Ipc06G0013550 AT2G28940.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0013560 AT1G07570.5 0 Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues Protein kinase superfamily protein;(source:Araport11) Ipc06G0013570 AT2G45910.2 0 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc06G0013580 AT3G46540.2 0 0 ENTH/VHS family protein;(source:Araport11) Ipc06G0013590 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc06G0013600 AT3G26730.8 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0013610 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0013620 AT3G46550.1 Fasciclin-like arabinogalactan family protein Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.SOS5 is required for normal mucilage adherence to seeds. Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc06G0013630 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0013640 AT5G02390.3 0 Target promoter of the male germline-specific transcription factor DUO1. TRM32-like protein (DUF3741);(source:Araport11) Ipc06G0013650 AT5G02380.1 metallothionein 2B cysteine-rich protein with copper-binding activity metallothionein 2B;(source:Araport11) Ipc06G0013660 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc06G0013670 AT4G40070.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0013680 AT2G28840.2 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc06G0013690 AT2G28840.1 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc06G0013700 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc06G0013710 AT4G33810.5 0 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc06G0013720 AT3G57150.1 homologue of NAP57 Encodes a putative pseudouridine synthase (NAP57). homologue of NAP57;(source:Araport11) Ipc06G0013730 AT3G55370.1 OBF-binding protein 3 Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. OBF-binding protein 3;(source:Araport11) Ipc06G0013740 AT5G02500.1 heat shock cognate protein 70-1 encodes a member of heat shock protein 70 family. heat shock cognate protein 70-1;(source:Araport11) Ipc06G0013750 AT5G59350.3 0 0 transmembrane protein;(source:Araport11) Ipc06G0013760 AT2G28800.1 63 kDa inner membrane family protein member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence. 63 kDa inner membrane family protein;(source:Araport11) Ipc06G0013770 AT2G28790.2 0 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc06G0013780 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc06G0013800 AT5G59960.2 0 0 K-stimulated pyrophosphate-energized sodium pump protein;(source:Araport11) Ipc06G0013790 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc06G0013810 AT5G59960.2 0 0 K-stimulated pyrophosphate-energized sodium pump protein;(source:Araport11) Ipc06G0013820 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0013830 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc06G0013840 AT5G59880.1 actin depolymerizing factor 3 Encodes actin depolymerizing factor 3 (ADF3). actin depolymerizing factor 3;(source:Araport11) Ipc06G0013850 AT5G02560.1 histone H2A 12 Encodes HTA12, a histone H2A protein. histone H2A 12;(source:Araport11) Ipc06G0013860 AT5G59800.1 methyl-CPG-binding domain 7 Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing. methyl-CPG-binding domain 7;(source:Araport11) Ipc06G0013870 AT3G55350.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) Ipc06G0013880 AT5G59790.1 Domain of unknown function (DUF966) SOK5 is a DUF966 domain containing protein expressed in early embryos. UPSTREAM OF FLC protein (DUF966);(source:Araport11) Ipc06G0013890 AT3G46130.2 myb domain protein 48 Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons. myb domain protein 48;(source:Araport11) Ipc06G0013900 AT2G28690.1 Protein of unknown function (DUF1635) 0 TOX high mobility group box protein, putative (DUF1635);(source:Araport11) Ipc06G0013910 AT1G04360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0013920 AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc06G0013950 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0013930 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0013960 AT1G07745.2 homolog of RAD51 D Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination. DNA repair RAD51-like protein;(source:Araport11) Ipc06G0013940 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0013970 AT2G28660.1 Chloroplast-targeted copper chaperone protein 0 Chloroplast-targeted copper chaperone protein;(source:Araport11) Ipc06G0013980 AT1G07710.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0013990 AT1G07705.2 NOT2 / NOT3 / NOT5 family 0 NOT2 / NOT3 / NOT5 family;(source:Araport11) Ipc06G0014000 AT3G46290.1 hercules receptor kinase 1 Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 1;(source:Araport11) Ipc06G0014010 AT5G02640.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0014020 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0014030 AT5G59980.1 Polymerase/histidinol phosphatase-like Encodes a predicted protein subunit of RNases P/MRP that plays a role in female gametophyte development and male competence. Polymerase/histidinol phosphatase-like protein;(source:Araport11) Ipc06G0014040 AT5G59990.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc06G0014050 AT3G25882.1 NIM1-interacting 2 encodes a kinase that physically interacts with NPR1/NIM1 NIM1-interacting 2;(source:Araport11) Ipc06G0014060 AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain 0 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc06G0014070 AT1G69440.1 Argonaute family protein Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds. Argonaute family protein;(source:Araport11) Ipc06G0014080 AT3G45850.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc06G0014090 AT3G45830.1 0 0 nuclear factor kappa-B-binding-like protein;(source:Araport11) Ipc06G0014100 AT5G60010.1 ferric reductase-like transmembrane component family protein 0 ferric reductase-like transmembrane component family protein;(source:Araport11) Ipc06G0014110 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0014120 AT2G28610.1 Homeodomain-like superfamily protein Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia. Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0014130 AT1G30800.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc06G0014140 AT1G07880.2 Protein kinase superfamily protein member of MAP Kinase Protein kinase superfamily protein;(source:Araport11) Ipc06G0014150 AT3G45730.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0014160 AT3G45730.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0014170 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0007600 AT5G17890.1 DA1-related protein 4 Encodes a protein that appears to be involved in defense responses. Contains TIR, NB-LRR and LIM domains. A gain of function allele exhibits cold dependent phenotypes including apparent activation of defense responses and an increased freezing tolerance. The mRNA is cell-to-cell mobile. DA1-related protein 4;(source:Araport11) Ipc08G0007590 #N/A #N/A #N/A #N/A Ipc08G0007580 AT4G35650.1 isocitrate dehydrogenase III Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. In contrast to the broadly expressed other regulatory (IDH-I and IDH-II) and catalytic (IDH-V and IDH-VI) subunits of this enzyme, IDH-III expression appears to be restricted largely to pollen. isocitrate dehydrogenase III;(source:Araport11) Ipc08G0007570 AT5G52580.1 RabGAP/TBC domain-containing protein 0 RabGAP/TBC domain-containing protein;(source:Araport11) Ipc08G0007560 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0007550 AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc08G0007540 AT5G32440.3 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc08G0007530 AT2G43290.1 Calcium-binding EF-hand family protein Calmodulin-like MSS3.Encodes an endomembrane localized member of the CML subfamily VII. Contains a canonical CaM domain and unique N-terminal extension that distinguishes it from other members of the subfamily. Calcium-binding EF-hand family protein;(source:Araport11) Ipc08G0007520 AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc08G0007510 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc08G0007500 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc08G0007490 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0007480 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0007470 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0007460 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc08G0007450 AT4G01870.2 0 0 tolB protein-like protein;(source:Araport11) Ipc08G0007440 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0007430 AT3G06670.1 binding SMEK1 forms a catalytically active complex with PP4 proteins. The complex has been shown to target and dephosphorylate HYL1 which in turn promotes miRNA biogenesis. Mutants have pleiotrophic phenotypes and decreased production of miRNA. SMEK1 accumulation is responsive to ABA. binding protein;(source:Araport11) Ipc08G0007420 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0007410 AT5G65060.1 K-box region and MADS-box transcription factor family protein MADS domain protein - flowering regulator that is closely related to FLC K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc08G0007400 AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0007390 AT3G24010.1 RING/FYVE/PHD zinc finger superfamily protein ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc08G0007380 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0007370 AT1G52660.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0007360 AT1G27752.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc08G0007350 AT5G36001.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0015420 AT3G08030.1 Protein of unknown function, DUF642 The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination. DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642);(source:Araport11) Ipc13G0015410 AT5G09680.2 reduced lateral root formation Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol. reduced lateral root formation;(source:Araport11) Ipc13G0015400 AT3G08650.2 ZIP metal ion transporter family 0 ZIP metal ion transporter family;(source:Araport11) Ipc13G0015390 AT5G13700.1 polyamine oxidase 1 Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants). polyamine oxidase 1;(source:Araport11) Ipc13G0015380 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0015370 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc13G0015360 AT5G13690.1 alpha-N-acetylglucosaminidase family / NAGLU family Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development. alpha-N-acetylglucosaminidase family / NAGLU family;(source:Araport11) Ipc13G0015350 AT5G52820.1 WD-40 repeat family protein / notchless protein, putative Encodes a NOTCHLESS homolog, a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit, that is required for female gametogenesis. The mRNA is cell-to-cell mobile. WD-40 repeat family protein / notchless protein;(source:Araport11) Ipc13G0015340 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0015320 AT4G34140.4 0 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc13G0015330 AT4G16440.1 ferredoxin hydrogenases Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing. ferredoxin hydrogenase;(source:Araport11) Ipc13G0015310 AT4G28470.1 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1B;(source:Araport11) Ipc13G0015300 AT5G26630.1 MADS-box transcription factor family protein 0 MADS-box transcription factor family protein;(source:Araport11) Ipc13G0015290 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0015280 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0015270 AT1G65300.1 AGAMOUS-like 38 Encodes PHERES2, a homolog of PHERES1. PHERES1 and PHERES2 are both target genes of the FIS Polycomb group complex but only PHERES1 is regulated by genomic imprinting, which is likely caused by the presence of repeat sequences in the proximity of the PHERES1 locus. AGAMOUS-like 38;(source:Araport11) Ipc13G0015260 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0015250 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015240 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0015230 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc13G0015220 AT5G49150.8 0 Encodes a transmembrane domain containing protein expressed in sperm cells. Target promoter of the male germline-specific transcription factor DUO1. gamete expressed 2;(source:Araport11) Ipc13G0015210 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015200 AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0015190 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0015180 AT3G18580.1 Nucleic acid-binding, OB-fold-like protein Member of the family of canonical mitochondrial DNA binding proteins. Single-stranded binding protein which does not interfere with MMEJ. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0015170 AT5G56220.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0015160 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc13G0015150 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0015140 AT5G12210.2 RAB geranylgeranyl transferase beta subunit 1 0 RAB geranylgeranyl transferase beta subunit 1;(source:Araport11) Ipc13G0015120 AT5G48960.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0 HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11) Ipc13G0015130 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0015110 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) IpcGene20496 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) IpcGene20497 AT3G63490.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc13G0015090 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc13G0015080 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0015070 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0015060 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0015050 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0015030 AT5G19440.1 NAD(P)-binding Rossmann-fold superfamily protein similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0015020 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc13G0015010 AT5G35390.1 Leucine-rich repeat protein kinase family protein Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0015000 AT1G21970.1 Histone superfamily protein Transcriptional activator of genes required for both embryo maturation and cellular differentiation. Sequence is similar to HAP3 subunit of the CCAAT-box binding factor. HAP3 subunit is divided into three domains: an amino-terminal A domain, a central B domain, and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central, B domain. LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation. It was sufficient to induce embryogenic programs in vegetative cells, suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development. Mutants are desiccation intolerant, have trichomes on cotyledons and exhibit precocious meristem activation. Levels of the ABI3 and FUS3 transcripts were significantly reduced in developing siliques of the lec1-1 mutants, indicating that LEC1 down-regulates FUS3 and ABI3.When LEC1 is overexpressed from an inducible promoter, the expression of numerous genes involved in fatty acid biosynthesis is increased suggesting a role in positive regulation of FA biosynthesis. Histone superfamily protein;(source:Araport11) Ipc13G0014990 AT2G13680.1 callose synthase 5 Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5;(source:Araport11) Ipc13G0014980 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc04G0001330 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001320 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc14G0009920 AT1G09850.1 xylem bark cysteine peptidase 3 Arabidopsis thaliana papain-like cysteine peptidase xylem bark cysteine peptidase 3;(source:Araport11) Ipc14G0009910 #N/A #N/A #N/A #N/A Ipc14G0009900 #N/A #N/A #N/A #N/A Ipc14G0009890 AT4G38960.4 0 BBX19 is a B-box containing transcriptional regulator involved in photomporphogenesis and flowering. B-box type zinc finger family protein;(source:Araport11) Ipc14G0009880 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0009870 AT1G02400.1 gibberellin 2-oxidase 6 Encodes a gibberellin 2-oxidase that acts on C19 gibberellins but not C20 gibberellins. gibberellin 2-oxidase 6;(source:Araport11) Ipc14G0009860 AT3G06510.1 Glycosyl hydrolase superfamily protein Encodes a protein with beta-glucosidase and galactosyltransferase activity, mutants show increased sensitivity to freezing. Though it is classified as a family I glycosyl hydrolase, it has no hydrolase activity in vitro. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc14G0009850 AT3G17180.1 serine carboxypeptidase-like 33 0 serine carboxypeptidase-like 33;(source:Araport11) Ipc14G0009840 AT5G49540.1 Rab5-interacting family protein 0 Rab5-interacting family protein;(source:Araport11) Ipc14G0009830 AT3G17160.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0009820 AT1G47960.2 0 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity. cell wall / vacuolar inhibitor of fructosidase 1;(source:Araport11) Ipc14G0009810 AT1G02380.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0009800 AT3G06580.1 Mevalonate/galactokinase family protein Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Ägal1 mutant defective in the galactokinase gene GAL1. Mevalonate/galactokinase family protein;(source:Araport11) Ipc14G0009790 AT4G16280.4 RNA binding;abscisic acid binding Flowering time control protein (FCA) flowering time control protein FCA;(source:Araport11) Ipc14G0009780 AT4G16270.1 Peroxidase superfamily protein Encodes a class III peroxidase that is genetically redundant with PRX9, expressed in the tapetum, and essential for proper anther and pollen development. peroxidase superfamily protein;(source:Araport11) Ipc14G0009770 AT1G07210.1 Ribosomal protein S18 0 Ribosomal protein S18;(source:Araport11) Ipc14G0009760 AT2G47260.1 WRKY DNA-binding protein 23 Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment and auxin mediated PIN polar localization in roots. Expression is induced by auxin. WRKY DNA-binding protein 23;(source:Araport11) Ipc14G0009750 AT5G49510.2 prefoldin 3 0 prefoldin 3;(source:Araport11) Ipc14G0009740 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0009730 AT3G17100.2 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc14G0009720 AT4G15850.1 RNA helicase 1 plant DEAD box-like RNA helicase. RNA helicase 1;(source:Araport11) Ipc14G0009710 AT3G17090.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc14G0009700 AT3G17070.1 Peroxidase family protein 0 Peroxidase family protein;(source:Araport11) Ipc14G0009690 AT3G17060.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0009680 AT3G06610.1 DNA-binding enhancer protein-related 0 DNA-binding enhancer protein-like protein;(source:Araport11) Ipc14G0009670 AT2G18790.1 phytochrome B Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. Promotes seedling etiolation in both the presence and absence of phytochrome A. Overexpression results in etiolation under far-red light. Accumulates in the nucleus after exposure to far red light. The phosphorylation state of the Ser-86 residue of the phytochrome B molecule alters dark reversion of the molecule. The mRNA is cell-to-cell mobile. phytochrome B;(source:Araport11) Ipc14G0009660 AT5G49460.2 0 One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL) ATP citrate lyase subunit B 2;(source:Araport11) Ipc14G0009650 AT1G22900.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc14G0009640 AT4G24972.1 tapetum determinant 1 Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1. tapetum determinant 1;(source:Araport11) Ipc14G0009630 AT3G66658.2 aldehyde dehydrogenase 22A1 Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. aldehyde dehydrogenase 22A1;(source:Araport11) Ipc14G0009620 AT1G55560.1 SKU5 similar 14 0 SKU5 similar 14;(source:Araport11) Ipc14G0009610 AT1G55570.1 SKU5 similar 12 0 SKU5 similar 12;(source:Araport11) Ipc14G0009600 AT3G17020.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc14G0009590 AT3G36659.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0009580 AT3G17000.1 ubiquitin-conjugating enzyme 32 Group XIV ubiquitin-conjugating enzyme that functions negative regulation of drought stress. ubiquitin-conjugating enzyme 32;(source:Araport11) Ipc14G0009570 AT5G49430.2 0 0 WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein;(source:Araport11) Ipc14G0009560 AT4G16160.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco. Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc14G0009550 AT3G06670.1 binding SMEK1 forms a catalytically active complex with PP4 proteins. The complex has been shown to target and dephosphorylate HYL1 which in turn promotes miRNA biogenesis. Mutants have pleiotrophic phenotypes and decreased production of miRNA. SMEK1 accumulation is responsive to ABA. binding protein;(source:Araport11) Ipc14G0009540 AT3G06700.3 Ribosomal L29e protein family 0 Ribosomal L29e protein family;(source:Araport11) Ipc14G0009530 AT3G16910.1 acyl-activating enzyme 7 Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle. acyl-activating enzyme 7;(source:Araport11) Ipc14G0009520 AT4G16146.1 cAMP-regulated phosphoprotein 19-related protein 0 cAMP-regulated phosphoprotein 19-related protein;(source:Araport11) Ipc14G0009510 AT2G47460.1 myb domain protein 12 MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots. Mutations in MYB12 block both auxin and ethylene stimulation of flavonoid synthesis. myb domain protein 12;(source:Araport11) Ipc14G0009500 AT3G49530.1 NAC domain containing protein 62 Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.It relocates from the plasma membrane to the nucleus in response to ER stress. NAC062 is phosphorylated by SnRK2.8 at Thr-142. NAC domain containing protein 62;(source:Araport11) Ipc14G0009490 AT5G49350.2 Glycine-rich protein family 0 Glycine-rich protein family;(source:Araport11) Ipc14G0009480 AT5G26910.4 0 Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division. GPI-anchored adhesin-like protein;(source:Araport11) Ipc14G0009470 AT1G67030.1 zinc finger protein 6 Encodes a novel C2H2 zinc finger protein containing only a single zinc finger which plays a key role in regulating trichome development by integrating GA and cytokinin signaling. The mRNA is cell-to-cell mobile. zinc finger protein 6;(source:Araport11) Ipc14G0009460 AT5G15550.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc14G0009450 AT4G13030.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0009440 AT5G49300.1 GATA transcription factor 16 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 16;(source:Araport11) Ipc14G0009430 AT1G02705.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0009420 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc14G0009410 AT4G16070.1 Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 0 lipase class 3 family protein;(source:Araport11) Ipc14G0009400 AT3G06778.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc14G0009390 AT5G11240.1 transducin family protein / WD-40 repeat family protein GHS40 encodes a WD40 protein, that is localized in the nucleus and nucleolus. In the presence of high glucose it negatively regulates the expression of abscisic acid degradation and signaling genes. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc14G0009380 #N/A #N/A #N/A #N/A Ipc14G0009370 AT3G16785.1 phospholipase D P1 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation. phospholipase D P1;(source:Araport11) Ipc14G0009360 AT3G06780.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc14G0009350 AT5G23250.1 Succinyl-CoA ligase, alpha subunit 0 Succinyl-CoA ligase, alpha subunit;(source:Araport11) Ipc14G0009340 AT5G47900.9 0 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc14G0009330 AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc14G0009320 AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc14G0009310 AT3G16730.1 0 0 condensin-2 complex subunit H2-like protein;(source:Araport11) Ipc14G0009290 AT4G15960.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0009300 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0009280 AT4G15960.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0009270 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0009260 AT4G15940.1 Fumarylacetoacetate (FAA) hydrolase family 0 Fumarylacetoacetate (FAA) hydrolase family;(source:Araport11) Ipc14G0009250 AT5G49130.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc14G0009240 AT3G06868.1 0 0 vitellogenin-like protein;(source:Araport11) Ipc14G0009230 AT1G04170.2 0 protein synthesis initiation factor eIF2 gammaThe mRNA is cell-to-cell mobile. eukaryotic translation initiation factor 2 gamma subunit;(source:Araport11) Ipc14G0009220 AT2G47650.1 UDP-xylose synthase 4 encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-xylose synthase 4;(source:Araport11) Ipc14G0009210 AT3G06890.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0009200 AT5G49060.2 0 0 DnaJ heat shock amino-terminal domain protein (DUF1977);(source:Araport11) Ipc14G0009190 AT3G16640.1 translationally controlled tumor protein Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. translationally controlled tumor protein;(source:Araport11) Ipc14G0009180 AT3G16630.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Kinesin-13A localized to entire Golgi stacks. Involved in trichome development. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0009170 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc14G0009160 AT2G47800.1 multidrug resistance-associated protein 4 Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. The mRNA is cell-to-cell mobile. multidrug resistance-associated protein 4;(source:Araport11) Ipc14G0009150 AT4G15840.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc14G0009140 AT4G15830.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc14G0009130 AT4G15820.1 0 0 ABC subfamily C protein;(source:Araport11) Ipc14G0009120 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0009110 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc14G0009100 AT4G14147.3 0 actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family binding protein;(source:Araport11) Ipc14G0009090 AT1G04910.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc14G0009080 AT4G13730.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc14G0009070 AT3G25040.1 endoplasmic reticulum retention defective 2B Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling. The mRNA is cell-to-cell mobile. endoplasmic reticulum retention defective 2B;(source:Araport11) Ipc14G0009060 AT3G07130.1 purple acid phosphatase 15 Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination. purple acid phosphatase 15;(source:Araport11) Ipc14G0009050 AT1G04860.1 ubiquitin-specific protease 2 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 2;(source:Araport11) Ipc14G0009040 AT3G24100.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc14G0009030 AT4G13620.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. The mRNA is cell-to-cell mobile. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0009020 AT4G13630.2 Protein of unknown function, DUF593 0 zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc14G0009000 AT3G24110.2 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc14G0009010 AT2G32800.1 protein kinase family protein 0 protein kinase family protein;(source:Araport11) Ipc14G0008990 AT3G24120.1 Homeodomain-like superfamily protein MYB-CC protein involved in regulation of response to phosphate starvation. Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0008980 AT1G04900.1 Protein of unknown function (DUF185) 0 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185);(source:Araport11) Ipc14G0008970 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0008960 AT4G11175.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0008950 AT3G03760.1 LOB domain-containing protein 20 0 LOB domain-containing protein 20;(source:Araport11) Ipc14G0008940 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0008930 AT5G48810.1 cytochrome B5 isoform D Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation. The mRNA is cell-to-cell mobile. cytochrome B5 isoform D;(source:Araport11) Ipc14G0008920 AT5G48810.1 cytochrome B5 isoform D Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation. The mRNA is cell-to-cell mobile. cytochrome B5 isoform D;(source:Araport11) Ipc14G0008910 AT1G55350.6 0 Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm. calpain-type cysteine protease family;(source:Araport11) Ipc14G0008900 AT3G24140.2 0 Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. It fulfills its role through recruitment of the Arabidopsis Retinoblastoma homologue, RETINOBLASTOMA-RELATED (RBR). Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell. Its transcript levels change after inducing MUTE expression in a mute background. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0008890 AT3G24800.1 proteolysis 1 Contains two ring finger domains and one ZZ domain. Weak similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis) that is involved in the response to pathogens. proteolysis 1;(source:Araport11) Ipc14G0008880 AT3G24800.1 proteolysis 1 Contains two ring finger domains and one ZZ domain. Weak similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis) that is involved in the response to pathogens. proteolysis 1;(source:Araport11) Ipc14G0008870 #N/A #N/A #N/A #N/A Ipc14G0008860 AT3G24170.3 glutathione-disulfide reductase Encodes a cytosolic glutathione reductase. glutathione-disulfide reductase;(source:Araport11) Ipc14G0008850 AT3G26932.2 dsRNA-binding protein 3 0 dsRNA-binding protein 3;(source:Araport11) Ipc14G0008840 AT2G47900.2 tubby like protein 3 Member of plant TLP family which differs in having an F box domain. Plasma membrane tethering is mediated by PIP2 binding domain. Under abiotic stress TLP3 detaches from the PM and translocates to the nucleus. Mutants are insensitive to ABA. tubby like protein 3;(source:Araport11) Ipc14G0008830 AT3G05030.4 0 Encodes a vacuolar K+/H+ exchanger essential for active K+ uptake at the tonoplast and involved in regulating stomatal closure. sodium hydrogen exchanger 2;(source:Araport11) Ipc14G0008820 AT1G08820.5 0 Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. vamp/synaptobrevin-associated protein 27-2;(source:Araport11) Ipc14G0008810 AT1G54630.1 acyl carrier protein 3 encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light. acyl carrier protein 3;(source:Araport11) Ipc14G0008800 AT1G08830.2 copper/zinc superoxide dismutase 1 Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress. Activation of CSD1 in the cytoplasm involves both a CCS-dependent and -independent pathway. copper/zinc superoxide dismutase 1;(source:Araport11) Ipc14G0008790 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc14G0008780 AT3G06340.4 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc14G0008770 AT3G06330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0008760 AT1G05260.1 Peroxidase superfamily protein Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc14G0008750 AT3G21490.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc14G0008740 AT5G18790.1 Ribosomal protein L33 family protein 0 Ribosomal protein L33 family protein;(source:Araport11) Ipc14G0008730 AT5G18800.2 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc14G0008720 AT5G18850.1 0 0 Low-density receptor-like protein;(source:Araport11) Ipc14G0008710 AT3G21510.1 histidine-containing phosphotransmitter 1 Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). histidine-containing phosphotransmitter 1;(source:Araport11) Ipc14G0008700 AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0008690 AT5G18910.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0008680 AT3G21570.1 0 0 proline-rich nuclear receptor coactivator;(source:Araport11) Ipc14G0008670 AT3G21550.1 DUF679 domain membrane protein 2 0 transmembrane protein, putative (DUF679 domain membrane protein 2);(source:Araport11) Ipc14G0008660 AT3G21530.3 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc14G0008650 AT4G15520.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc14G0008640 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0008630 AT5G18920.1 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc14G0008620 AT3G06270.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc14G0008610 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc14G0008600 AT5G18930.1 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc14G0008590 AT1G03350.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc14G0008580 AT4G15470.1 Bax inhibitor-1 family protein 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc14G0008570 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc14G0008560 #N/A #N/A #N/A #N/A Ipc14G0008550 AT4G14290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0008540 AT5G18980.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc14G0008530 AT3G06200.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0008520 AT3G06190.1 BTB-POZ and MATH domain 2 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 2;(source:Araport11) Ipc14G0008510 AT5G19020.1 mitochondrial editing factor 18 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 18;(source:Araport11) Ipc14G0008500 AT3G06180.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc14G0008490 AT3G06170.1 Serinc-domain containing serine and sphingolipid biosynthesis protein 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc14G0008480 AT4G14240.1 CBS domain-containing protein with a domain of unknown function (DUF21) 0 CBS domain protein with a domain protein (DUF21);(source:Araport11) Ipc14G0008470 AT5G19050.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0008460 AT3G06150.1 0 0 cytochrome P450 family protein;(source:Araport11) Ipc14G0008450 AT3G06145.1 0 0 RING zinc finger protein;(source:Araport11) Ipc14G0008440 AT3G06130.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc14G0008430 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0008420 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc14G0008410 AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc14G0008400 AT1G26665.1 Mediator complex, subunit Med10 0 Mediator complex, subunit Med10;(source:Araport11) Ipc14G0008390 AT4G14950.1 SNARE associated Golgi protein family KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway. SNARE associated Golgi protein family;(source:Araport11) Ipc14G0008380 AT3G05960.1 sugar transporter 6 Encodes a hexose sugar transporter that is expressed in pollen. STP6 may play a role in providing sugars during late pollen maturation or pollen tube germination. sugar transporter 6;(source:Araport11) Ipc14G0008370 AT5G26250.1 Major facilitator superfamily protein Sugar transporter expressed strongly in pollen and pollen tubes. Major facilitator superfamily protein;(source:Araport11) Ipc14G0008360 AT5G27600.1 long-chain acyl-CoA synthetase 7 Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. long-chain acyl-CoA synthetase 7;(source:Araport11) Ipc14G0008350 AT4G19600.1 Cyclin family protein Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV). The mRNA is cell-to-cell mobile. Cyclin family protein;(source:Araport11) Ipc14G0008340 AT3G05990.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc14G0008330 AT5G19320.2 0 Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase. RAN GTPase activating protein 2;(source:Araport11) Ipc14G0008320 AT5G19280.1 kinase associated protein phosphatase kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region kinase associated protein phosphatase;(source:Araport11) Ipc14G0008310 AT1G03170.1 Protein of unknown function (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc14G0008300 AT3G06030.1 NPK1-related protein kinase 3 NPK1-related protein kinase 3 NPK1-related protein kinase 3;(source:Araport11) Ipc14G0008290 AT5G27520.1 peroxisomal adenine nucleotide carrier 2 encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth. peroxisomal adenine nucleotide carrier 2;(source:Araport11) Ipc14G0008280 AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1 Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. ADP glucose pyrophosphorylase large subunit 1;(source:Araport11) Ipc14G0008270 AT5G19200.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc14G0008260 AT5G19180.1 E1 C-terminal related 1 Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. E1 C-terminal related 1;(source:Araport11) Ipc14G0008250 AT5G19160.1 TRICHOME BIREFRINGENCE-LIKE 11 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 11;(source:Araport11) Ipc14G0008240 AT5G19151.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0008230 AT5G19150.2 pfkB-like carbohydrate kinase family protein AT5G19150 is a dehydratase that converts (S)-NAD(P)HX to NAD(P)H. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc14G0008220 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc14G0008210 AT5G19140.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc14G0008200 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0008190 AT3G06100.1 NOD26-like intrinsic protein 7;1 Encodes NIP7;1, an anther-specific boric acid transporter of the aquaporin superfamily regulated by an unusual tyrosine in helix 2 of the transport pore. NOD26-like intrinsic protein 7;(source:Araport11) Ipc14G0008180 AT4G14940.1 amine oxidase 1 atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development. amine oxidase 1;(source:Araport11) Ipc14G0008170 AT1G31690.1 Copper amine oxidase family protein 0 Copper amine oxidase family protein;(source:Araport11) Ipc14G0008160 AT1G31710.1 Copper amine oxidase family protein 0 Copper amine oxidase family protein;(source:Araport11) Ipc14G0008150 AT5G28150.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc14G0008140 AT1G05370.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc14G0008130 AT4G14920.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc14G0008120 AT4G14910.1 HISTIDINE BIOSYNTHESIS 5B Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis HISTIDINE BIOSYNTHESIS 5B;(source:Araport11) Ipc14G0008110 AT1G05385.1 photosystem II 11 kDa protein-related Encodes a Psb27 homolog involved in photosystem II biogenesis. photosystem II 11 kDa protein-like protein;(source:Araport11) Ipc14G0008100 AT4G09800.1 S18 ribosomal protein encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex S18 ribosomal protein;(source:Araport11) Ipc14G0008090 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0008080 AT3G22430.1 0 0 RNA recognition motif XS domain protein;(source:Araport11) Ipc14G0008070 AT3G22440.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc14G0008060 AT4G14880.5 0 Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence. Required for pollen tube growth and/or fertilization. O-acetylserine (thiol) lyase (OAS-TL) isoform A1;(source:Araport11) Ipc14G0008050 AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0008040 AT1G05440.1 C-8 sterol isomerases 0 C-8 sterol isomerase;(source:Araport11) Ipc14G0008030 AT3G22540.1 Protein of unknown function (DUF1677) 0 hypothetical protein (DUF1677);(source:Araport11) Ipc14G0008020 AT2G32040.1 Major facilitator superfamily protein The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids. Major facilitator superfamily protein;(source:Araport11) Ipc14G0008010 AT2G32030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc14G0008000 AT4G14805.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc14G0007990 AT3G22630.1 20S proteasome beta subunit D1 Encodes 20S proteasome beta subunit PBD1 (PBD1). 20S proteasome beta subunit D1;(source:Araport11) Ipc14G0007980 AT1G05470.2 0 Encodes an inositol polyphosphate 5 Prime phosphatase (5PTase) that is required for the proper recruitment of cells into developing vascular tissue in leaves and cotyledons. It is most similar to Type I 5PTases that are known to cleave a phosphate from IP3 or IP4. cvp2 mutants have elevated levels of IP3 and are hypersensitive to ABA in seed germination assays. DNAse I-like superfamily protein;(source:Araport11) Ipc14G0007970 AT3G12170.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc14G0007960 AT3G22680.1 RNA-DIRECTED DNA METHYLATION 1 Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation. RNA-DIRECTED DNA METHYLATION 1;(source:Araport11) Ipc14G0007950 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0007940 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0007930 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0007920 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0007910 AT3G22750.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0007900 AT3G49430.7 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SER/ARG-rich protein 34A;(source:Araport11) Ipc14G0007890 AT5G48720.4 0 Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation. x-ray induced transcript 1;(source:Araport11) Ipc14G0007880 AT4G14770.1 TESMIN/TSO1-like CXC 2 Regulates fate transition and cell Divisions in the stomatal lineage. TESMIN/TSO1-like CXC 2;(source:Araport11) Ipc14G0007870 AT3G22800.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc14G0007860 AT1G04190.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0007850 AT3G51895.2 0 Encodes a chloroplast-localized sulfate transporter. sulfate transporter 3;(source:Araport11) Ipc14G0007840 AT4G14750.1 IQ-domain 19 0 IQ-domain 19;(source:Araport11) Ipc14G0007830 AT4G14746.1 0 0 neurogenic locus notch-like protein;(source:Araport11) Ipc14G0007820 AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc14G0007810 AT1G03070.3 0 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc14G0007800 AT5G43850.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc14G0007790 AT4G14710.2 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc14G0007780 AT3G22830.1 heat shock transcription factor A6B member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B;(source:Araport11) Ipc14G0007770 AT4G14690.1 Chlorophyll A-B binding family protein Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis. Chlorophyll A-B binding family protein;(source:Araport11) Ipc14G0007760 AT1G54690.1 gamma histone variant H2AX Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. gamma histone variant H2AX;(source:Araport11) Ipc14G0007750 AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein 0 D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc14G0007740 AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein 0 D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc14G0007730 AT1G11760.1 0 Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. MED32 has now been annotated as the MED2 subunit of the Mediator complex. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc14G0007720 AT3G24065.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc14G0007710 AT3G24068.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc14G0007700 AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein 0 D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc14G0007690 AT1G62290.2 Saposin-like aspartyl protease family protein 0 Saposin-like aspartyl protease family protein;(source:Araport11) Ipc14G0007680 AT3G22845.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc14G0007670 AT5G43830.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc14G0007660 AT3G22880.2 0 Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene. DNA repair (Rad51) family protein;(source:Araport11) Ipc14G0007650 AT5G43810.4 0 Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development. Stabilizer of iron transporter SufD / Polynucleotidyl transferase;(source:Araport11) Ipc14G0007640 AT1G48330.1 0 0 SsrA-binding protein;(source:Araport11) Ipc14G0007630 AT5G48770.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc14G0007620 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0007580 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0007610 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc14G0007600 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0007590 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0007570 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc14G0007560 AT4G31980.1 0 0 PPPDE thiol peptidase family protein;(source:Araport11) Ipc14G0007540 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0007550 #N/A #N/A #N/A #N/A Ipc14G0007530 AT4G14640.1 calmodulin 8 encodes a divergent member of calmodulin, which is an EF-hand family of Ca2+-binding proteins. This gene is expressed in leaves, flowers and siliques. The gene functionally complements yeast calmodulin 1 (CAM1). Also the protein does not form formed a complex with a basic amphiphilic helical peptide in the presence of Ca2+ in vitro. Authors suggest that this gene may represent a Ca2+-binding sensor protein that interacts with a more limited set of target proteins than do more conventional CaM isoforms. calmodulin 8;(source:Araport11) Ipc14G0007520 AT3G63410.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0007510 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc14G0007500 AT3G44716.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0007490 AT3G18180.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc14G0007480 AT4G30860.1 SET domain group 4 Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects. SET domain group 4;(source:Araport11) Ipc14G0007470 #N/A #N/A #N/A #N/A Ipc14G0007460 AT3G22942.1 G-protein gamma subunit 2 heterotrimeric G-protein gamma subunit 2(AGG2) G-protein gamma subunit 2;(source:Araport11) Ipc14G0007450 AT3G22950.2 ADP-ribosylation factor C1 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1;(source:Araport11) Ipc14G0007440 AT3G22960.1 Pyruvate kinase family protein encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mRNA is cell-to-cell mobile. Pyruvate kinase family protein;(source:Araport11) Ipc14G0007430 AT3G22970.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc14G0007420 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0007410 AT1G04220.1 3-ketoacyl-CoA synthase 2 Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 2;(source:Araport11) Ipc14G0007400 AT1G04220.1 3-ketoacyl-CoA synthase 2 Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 2;(source:Araport11) Ipc14G0007390 AT3G23000.1 CBL-interacting protein kinase 7 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 7;(source:Araport11) Ipc14G0007380 AT4G14570.1 acylaminoacyl-peptidase-related Encodes an acylamino acid-releasing enzyme (AARE) catalyzing the N-terminal hydrolysis of N[alpha]-acylpeptides to release N[alpha]-acylated amino acids The mRNA is cell-to-cell mobile. acylaminoacyl-peptidase-like protein;(source:Araport11) Ipc14G0007370 AT4G14570.1 acylaminoacyl-peptidase-related Encodes an acylamino acid-releasing enzyme (AARE) catalyzing the N-terminal hydrolysis of N[alpha]-acylpeptides to release N[alpha]-acylated amino acids The mRNA is cell-to-cell mobile. acylaminoacyl-peptidase-like protein;(source:Araport11) Ipc14G0007360 AT5G58260.1 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly. oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor;(source:Araport11) Ipc14G0007350 AT5G43700.1 AUX/IAA transcriptional regulator family protein Auxin inducible protein similar to transcription factors. AUX/IAA transcriptional regulator family protein;(source:Araport11) Ipc14G0007340 AT4G14550.1 indole-3-acetic acid inducible 14 IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. indole-3-acetic acid inducible 14;(source:Araport11) Ipc14G0007330 AT2G30550.2 alpha/beta-Hydrolases superfamily protein Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0007320 AT5G43670.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc14G0007310 AT5G09500.1 Ribosomal protein S19 family protein 0 Ribosomal protein S19 family protein;(source:Araport11) Ipc14G0007300 AT5G43650.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0007290 AT4G14520.9 0 0 DNA-directed RNA polymerase II-like protein;(source:Araport11) Ipc14G0007280 AT4G22340.1 cytidinediphosphate diacylglycerol synthase 2 0 cytidinediphosphate diacylglycerol synthase 2;(source:Araport11) Ipc14G0007270 AT2G30620.2 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc14G0007260 AT5G43630.4 0 Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.The mRNA is cell-to-cell mobile. Gene ontology analysis of common promoter targets suggests an active role in the transcriptional regulation of gene expression in response to environmental, biotic, abiotic, and endogenous stimuli. Promoter regions show a huge over-representation in proteins involved in transcription, clock, flowering, and light signaling components, reflecting its involvement in regulating gene expression in response to environmental stimuli such as light and temperature. Coassociates with and regulates the expression of light-regulated loci as well as transcriptional regulators to shape plant development in response to environmental stimuli. Requires, at least in part, ZFHD10 for function with regard to blue-light-regulated hypocotyl elongation. zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0007250 AT5G61010.2 exocyst subunit exo70 family protein E2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein E2;(source:Araport11) Ipc14G0007240 AT1G22380.1 UDP-glucosyl transferase 85A3 Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus. UDP-glucosyl transferase 85A3;(source:Araport11) Ipc14G0007230 AT4G14500.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc14G0007220 AT3G23090.1 TPX2 (targeting protein for Xklp2) protein family Member of the microtubule regulatory protein WVD2/WDL family WDL3 stabilizes cortical microtubules and is involved in light induced hypocotyl elongation. WDL3 is ubiquinated by COP1, leading to its degadation in the dark, TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc14G0007210 AT5G43600.1 ureidoglycolate amidohydrolase Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity. The mRNA is cell-to-cell mobile. ureidoglycolate amidohydrolase;(source:Araport11) Ipc14G0007200 AT3G23100.2 homolog of human DNA ligase iv-binding protein XRCC4 A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein. DNA ligase IV-binding protein;(source:Araport11) Ipc14G0007190 AT3G23123.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0007180 AT1G04300.1 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc14G0007170 AT1G27450.1 adenine phosphoribosyl transferase 1 Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP. adenine phosphoribosyl transferase 1;(source:Araport11) Ipc14G0007160 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0007150 AT4G24010.1 cellulose synthase like G1 encodes a protein similar to cellulose synthase cellulose synthase like G1;(source:Araport11) Ipc14G0007140 AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc14G0007130 AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Involved in ethylene perception in Arabidopsis The mRNA is cell-to-cell mobile. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc14G0007120 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc14G0007110 AT3G23160.1 Protein of unknown function (DUF668) 0 plant/protein (DUF668);(source:Araport11) Ipc14G0007100 AT4G14450.1 0 A member of a small family of proline/serine rich proteins of unknown function. It interacts with defense related MAP kinase MPK6. It's expression is induced by PAMP elicitors. May play a role in response to pathogens. hypothetical protein;(source:Araport11) Ipc14G0007090 AT5G43500.1 actin-related protein 9 encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. actin-related protein 9;(source:Araport11) Ipc14G0007080 AT4G14420.1 HR-like lesion-inducing protein-related 0 HR-like lesion-inducing protein-like protein;(source:Araport11) Ipc14G0007070 AT3G23200.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc14G0007060 AT4G09660.1 0 0 zinc finger MYM-type-like protein;(source:Araport11) Ipc14G0007050 AT4G08300.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc14G0007040 AT4G14410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Basic helix loop helix transcription factor involved in stress mediated signaling during germination. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0007030 AT3G23230.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0007020 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc14G0007010 AT2G20410.2 0 0 RNA-binding ASCH domain protein;(source:Araport11) Ipc14G0007000 AT2G39840.1 type one serine/threonine protein phosphatase 4 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. The mRNA is cell-to-cell mobile. type one serine/threonine protein phosphatase 4;(source:Araport11) Ipc14G0006990 AT5G43360.1 phosphate transporter 1;3 Encodes Pht1;3, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc14G0006980 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc14G0006970 AT1G08650.1 phosphoenolpyruvate carboxylase kinase 1 Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. The mRNA is cell-to-cell mobile. phosphoenolpyruvate carboxylase kinase 1;(source:Araport11) Ipc14G0006960 AT3G22500.1 Seed maturation protein late embryogenesis abundant (LEA) protein Seed maturation protein;(source:Araport11) Ipc14G0006950 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc14G0006940 AT5G43330.1 Lactate/malate dehydrogenase family protein predicted to encode a cytosolic malate dehydrogenase. The mRNA is cell-to-cell mobile. Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc14G0006930 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc14G0006920 AT1G04420.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc14G0006910 AT1G04420.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc14G0006900 AT4G14368.4 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc14G0006890 AT4G28600.2 0 encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. no pollen germination related 2;(source:Araport11) Ipc14G0006880 AT5G44060.1 0 0 embryo sac development arrest protein;(source:Araport11) Ipc14G0006870 AT2G34900.1 Transcription factor GTE6 Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. Transcription factor GTE6;(source:Araport11) Ipc14G0006860 AT4G14305.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc14G0006850 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0006840 AT3G23430.1 phosphate 1 Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots. PHO is expressed in developing ovules and plays a role in the transfer of Ph from maternal tissues to filial tissues. phosphate 1;(source:Araport11) Ipc14G0006830 AT4G28570.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc14G0006820 AT2G33470.2 glycolipid transfer protein 1 0 glycolipid transfer protein 1;(source:Araport11) Ipc14G0006810 AT3G23370.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0006800 AT5G43310.2 COP1-interacting protein-related 0 COP1-interacting protein-like protein;(source:Araport11) Ipc14G0006790 AT3G23350.2 0 0 ENTH/VHS family protein;(source:Araport11) Ipc14G0006780 AT4G14340.1 casein kinase I Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins. Member of CKL gene family (CKL-C group). casein kinase I;(source:Araport11) Ipc14G0006770 AT4G14350.4 0 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc14G0006760 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006750 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006740 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006730 AT1G19715.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006720 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006710 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0006700 AT2G33420.1 Protein of unknown function (DUF810) 0 hypothetical protein (DUF810);(source:Araport11) Ipc14G0006690 AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. The mRNA is cell-to-cell mobile. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0006680 AT2G33385.2 actin-related protein C2B 0 actin-related protein C2B;(source:Araport11) Ipc14G0006670 AT2G05620.2 0 Involved in electron flow in Photosystem I. Essential for photoprotection. proton gradient regulation 5;(source:Araport11) Ipc14G0006660 AT3G04380.1 SET-domain containing protein lysine methyltransferase family protein Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc14G0006650 AT2G33360.1 Protein of unknown function (DUF3527) 0 cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527);(source:Araport11) Ipc14G0006640 AT1G04500.4 0 0 CCT motif family protein;(source:Araport11) Ipc14G0006630 AT1G04510.1 MOS4-associated complex 3A Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity. MOS4-associated complex 3A;(source:Araport11) Ipc14G0006620 AT4G13330.4 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0006610 AT4G21865.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0006600 AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0006590 AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc14G0006580 AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0006570 AT2G33310.2 auxin-induced protein 13 Auxin induced gene, IAA13 (IAA13). auxin-induced protein 13;(source:Araport11) Ipc14G0006560 AT4G13450.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc14G0006550 AT4G13440.2 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc14G0006540 AT5G24890.1 0 0 stress response NST1-like protein;(source:Araport11) Ipc14G0006530 AT1G11810.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc14G0006520 AT4G13460.2 SU(VAR)3-9 homolog 9 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. SU(VAR)3-9 homolog 9;(source:Araport11) Ipc14G0006510 AT3G49600.2 0 Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1. ubiquitin-specific protease 26;(source:Araport11) Ipc14G0006500 AT3G24310.1 myb domain protein 305 snapdragon myb protein 305 homolog (myb) myb domain protein 305;(source:Araport11) Ipc14G0006490 AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0006480 AT1G13740.1 ABI five binding protein 2 Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent. ABI five binding protein 2;(source:Araport11) Ipc14G0006470 AT3G25150.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc14G0006460 AT1G69220.1 Protein kinase superfamily protein Encodes serine/threonine kinase 1 (SIK1), a Hippo homolog. Regulates cell proliferation and cell expansion. Protein kinase superfamily protein;(source:Araport11) Ipc14G0006450 AT1G69200.1 fructokinase-like 2 Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription. The mRNA is cell-to-cell mobile. fructokinase-like protein;(source:Araport11) Ipc14G0006440 AT4G30000.1 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0 Dihydropterin pyrophosphokinase / Dihydropteroate synthase;(source:Araport11) Ipc14G0006430 AT1G69180.1 Plant-specific transcription factor YABBY family protein Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region. CRC targets YABBY genes such as YUC4 in gynoecium development. Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc14G0006420 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc14G0006410 AT2G46900.1 0 0 transcription factor-like protein;(source:Araport11) Ipc14G0006400 AT1G69160.1 0 0 suppressor;(source:Araport11) Ipc14G0006390 AT2G03710.2 K-box region and MADS-box transcription factor family protein This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc14G0006380 AT1G69120.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc14G0006370 AT2G03720.2 0 Involved in root hair development Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc14G0006360 AT1G69070.2 0 0 nucleolar-like protein;(source:Araport11) Ipc14G0006350 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0006340 #N/A #N/A #N/A #N/A Ipc14G0006330 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0006320 AT5G18430.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc14G0006310 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0006300 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0006290 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0006280 AT3G52280.2 general transcription factor group E6 Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation. general transcription factor group E6;(source:Araport11) Ipc14G0006270 AT1G69040.2 ACT domain repeat 4 ACT-domain containing protein involved in feedback regulation of amino acid metabolism ACT domain repeat 4;(source:Araport11) Ipc14G0006260 AT2G27570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0006240 AT5G07010.1 sulfotransferase 2A Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). sulfotransferase 2A;(source:Araport11) Ipc14G0006250 AT3G45070.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a sulfotransferase with sulfating activity toward flavonoids. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0006230 AT5G07010.1 sulfotransferase 2A Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). sulfotransferase 2A;(source:Araport11) Ipc14G0006220 AT5G16950.1 0 0 krueppel-like factor;(source:Araport11) Ipc14G0006210 AT2G03770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a sulfotransferase with sulfating activity toward flavonoids, specifically kaempferol. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0006200 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc14G0006190 AT1G69020.2 0 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc14G0006180 AT1G69020.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc14G0006170 AT4G25740.1 RNA binding Plectin/S10 domain-containing protein 0 RNA binding Plectin/S10 domain-containing protein;(source:Araport11) Ipc14G0006160 AT1G12220.2 Disease resistance protein (CC-NBS-LRR class) family Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0006150 AT1G59620.2 0 Encodes CW9. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0006140 AT1G59780.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc14G0006130 AT2G17050.3 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc14G0006120 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0006110 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0006100 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc14G0006090 AT2G03890.1 phosphoinositide 4-kinase gamma 7 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. The mRNA is cell-to-cell mobile. phosphoinositide 4-kinase gamma 7;(source:Araport11) Ipc14G0006080 AT1G13635.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc14G0006070 AT2G04025.2 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc14G0006060 AT2G04030.1 Chaperone protein htpG family protein Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response and crucial for protein import into the chloroplast stroma. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. Chaperone protein htpG family protein;(source:Araport11) Ipc14G0006050 AT1G68990.1 male gametophyte defective 3 MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development. male gametophyte defective 3;(source:Araport11) Ipc14G0006040 AT1G68920.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0006030 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc14G0006020 AT2G30920.2 0 The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis. coenzyme Q 3;(source:Araport11) Ipc14G0006010 AT1G68890.2 0 Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.The mRNA is cell-to-cell mobile. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein;(source:Araport11) Ipc14G0006000 AT1G68890.1 magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis. The mRNA is cell-to-cell mobile. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein;(source:Araport11) Ipc14G0005990 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc14G0005980 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0005970 AT1G13580.3 LAG1 longevity assurance homolog 3 Encodes a ceramide synthase that together with LOH1 is essential for production of ceramides containing Very Long Chain Fatty acid VLCFA-Ceramides(mainly C 22 to 26). LAG1 longevity assurance-like protein;(source:Araport11) Ipc14G0005960 AT1G26190.1 Phosphoribulokinase / Uridine kinase family TTM2 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity.It contains both a uridine kinase (UK) domain and CYTH domain. TTM2 is involved in negative regulation defense response to pathogens (PMID:28733390). Phosphoribulokinase / Uridine kinase family;(source:Araport11) Ipc14G0005950 AT1G09850.1 xylem bark cysteine peptidase 3 Arabidopsis thaliana papain-like cysteine peptidase xylem bark cysteine peptidase 3;(source:Araport11) Ipc14G0005940 AT1G63200.1 Cystatin/monellin superfamily protein 0 Cystatin/monellin superfamily protein;(source:Araport11) Ipc14G0005930 AT1G30910.1 Molybdenum cofactor sulfurase family protein 0 Molybdenum cofactor sulfurase family protein;(source:Araport11) Ipc14G0005920 AT4G39160.3 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0005910 AT4G02400.1 U3 ribonucleoprotein (Utp) family protein 0 U3 ribonucleoprotein (Utp) family protein;(source:Araport11) Ipc14G0005900 AT1G13560.1 aminoalcoholphosphotransferase 1 Encodes aminoalcoholphosphotransferase AAPT1. aminoalcoholphosphotransferase 1;(source:Araport11) Ipc14G0005890 AT3G25600.1 Calcium-binding EF-hand family protein Calmodulin like protein. Paralog of CML15. Calcium-binding EF-hand family protein;(source:Araport11) Ipc14G0005880 AT1G68710.2 0 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0005870 #N/A #N/A #N/A #N/A Ipc14G0005860 AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein Encodes PHO1;H1, a member of the PHO1 family. Involved in inorganic phosphate (Pi) transport and homeostasis. Complements pho1 mutation. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc14G0005850 AT2G46970.2 0 encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. phytochrome interacting factor 3-like 1;(source:Araport11) Ipc14G0005840 AT5G23960.1 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc14G0005830 AT5G23960.1 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc14G0005820 AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein 0 Cytochrome c oxidase, subunit Vib family protein;(source:Araport11) Ipc14G0005810 AT5G23960.1 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc14G0005800 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc14G0005790 AT3G29780.1 ralf-like 27 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 27;(source:Araport11) Ipc14G0005780 AT1G68750.1 phosphoenolpyruvate carboxylase 4 Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed. phosphoenolpyruvate carboxylase 4;(source:Araport11) Ipc14G0005770 AT3G25640.2 0 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc14G0005760 AT3G21360.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0005750 AT3G25690.6 0 actin binding protein required for normal chloroplast positioningThe mRNA is cell-to-cell mobile. Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0005740 AT1G26090.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0005730 AT1G49000.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0005720 AT1G73965.1 CLAVATA3/ESR-RELATED 13 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 13;(source:Araport11) Ipc14G0005710 AT1G25682.2 0 0 coiled-coil protein (DUF572);(source:Araport11) Ipc14G0005700 AT1G68800.2 0 Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12;(source:Araport11) Ipc14G0005690 AT3G25700.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0005680 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0005670 AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc14G0005660 AT5G63140.1 purple acid phosphatase 29 0 purple acid phosphatase 29;(source:Araport11) Ipc14G0005650 AT5G63140.1 purple acid phosphatase 29 0 purple acid phosphatase 29;(source:Araport11) Ipc14G0005640 AT1G25570.1 Di-glucose binding protein with Leucine-rich repeat domain 0 Di-glucose binding protein with Leucine-rich repeat domain-containing protein;(source:Araport11) Ipc14G0005630 AT1G13260.1 related to ABI3/VP1 1 Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator. The mRNA is cell-to-cell mobile. related to ABI3/VP1 1;(source:Araport11) Ipc14G0005620 AT1G13270.1 methionine aminopeptidase 1B Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C. methionine aminopeptidase 1B;(source:Araport11) Ipc14G0005610 AT1G25550.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc14G0005600 AT3G23990.1 heat shock protein 60 mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60;(source:Araport11) Ipc14G0005590 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc14G0005580 AT1G25510.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0005570 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc14G0005560 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc14G0005550 AT5G15110.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc14G0005540 AT1G58320.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc14G0005530 AT1G68620.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0005520 AT1G68590.1 Ribosomal protein PSRP-3/Ycf65 0 Ribosomal protein PSRP-3/Ycf65;(source:Araport11) Ipc14G0005510 AT3G25805.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0005500 AT1G13340.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc14G0005490 AT3G25840.1 Protein kinase superfamily protein Spliceosome-associated kinase involved in alternative splicing. May influence alternative splicing patterns by phosphorylating a subset of splicing regulators. Protein kinase superfamily protein;(source:Araport11) Ipc14G0005480 AT1G68585.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0005460 AT1G68580.4 0 0 Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc14G0005470 AT1G68580.3 0 0 Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc14G0005450 AT1G68570.1 Major facilitator superfamily protein NPF3.1 is a membrane localized GA transporter that is expressed in the root endodermis. Major facilitator superfamily protein;(source:Araport11) Ipc04G0001780 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0014700 AT5G62180.1 carboxyesterase 20 0 carboxyesterase 20;(source:Araport11) Ipc05G0014710 AT3G02650.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0014720 AT1G21750.2 PDI-like 1-1 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. The mRNA is cell-to-cell mobile. PDI-like 1-1;(source:Araport11) Ipc05G0014730 AT1G52540.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0014740 AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0014750 AT2G45590.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0014760 AT3G55830.1 Nucleotide-diphospho-sugar transferases superfamily protein A member of the Glycosyltransferase Family 64, homologous to Poplar cambium-expressed GT64 gene. The EPC1 protein plays a critical role during plant development in maintaining the integrity of organs via cell-cell adhesion, thereby providing mechanical strength and facilitating the movement of metabolites throughout the plant.Loss of function specifically affects glycosylinositolphosphorylceramide (GIPC) mannosylation. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc05G0014770 AT5G51750.1 subtilase 1.3 0 subtilase 1.3;(source:Araport11) Ipc05G0014780 AT2G28100.1 alpha-L-fucosidase 1 Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in Pichia pastoris. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (Pichia pastoris) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase The mRNA is cell-to-cell mobile. alpha-L-fucosidase 1;(source:Araport11) Ipc05G0014790 AT5G51740.1 Peptidase family M48 family protein Mitochondrial ATP-independent protease .Important for maintenance of proper function of the oxphos system. Peptidase family M48 family protein;(source:Araport11) Ipc05G0014800 AT5G51720.1 2 iron, 2 sulfur cluster binding Encodes a protein with biochemical, structural, and biophysical characteristics of a NEET protein. It plays a key role in plant development, senescence, reactive oxygen homeostasis, and Fe metabolism. 2 iron, 2 sulfur cluster binding protein;(source:Araport11) Ipc05G0014810 AT5G51660.1 cleavage and polyadenylation specificity factor 160 0 cleavage and polyadenylation specificity factor 160;(source:Araport11) Ipc05G0014820 AT4G25370.1 Double Clp-N motif protein 0 Double Clp-N motif protein;(source:Araport11) Ipc05G0014830 AT4G25360.2 TRICHOME BIREFRINGENCE-LIKE 18 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 18;(source:Araport11) Ipc05G0014840 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc05G0014850 AT4G25340.1 FK506 BINDING PROTEIN 53 Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression. FK506 BINDING PROTEIN 53;(source:Araport11) Ipc05G0014860 AT1G62870.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0014870 AT3G47370.3 Ribosomal protein S10p/S20e family protein 0 Ribosomal protein S10p/S20e family protein;(source:Araport11) Ipc05G0014880 AT5G62290.2 nucleotide-sensitive chloride conductance regulator (ICln) family protein 0 nucleotide-sensitive chloride conductance regulator (ICln) family protein;(source:Araport11) Ipc05G0014890 AT4G00100.1 ribosomal protein S13A Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development The mRNA is cell-to-cell mobile. ribosomal protein S13A;(source:Araport11) Ipc05G0014900 AT5G43930.3 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc05G0014910 AT5G51550.1 EXORDIUM like 3 0 EXORDIUM like 3;(source:Araport11) Ipc05G0014920 AT5G51540.1 Zincin-like metalloproteases family protein Mitochondrial ATP-independent protease Zincin-like metalloproteases family protein;(source:Araport11) Ipc05G0014930 AT5G62310.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc05G0014940 AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein 0 GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc05G0014950 AT1G62770.1 Plant invertase/pectin methylesterase inhibitor superfamily protein PMEI9 pectin methyleseterase inhibitor. Expressed in many plant tissues. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0014960 AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor expressed throughout the plant. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0014970 AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor expressed throughout the plant. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0014980 AT3G52950.2 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11) Ipc05G0014990 AT5G51500.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc05G0015000 AT5G62360.1 Plant invertase/pectin methylesterase inhibitor superfamily protein Pectin methylesterase inhibitor expressed throughout the plant. Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0015010 AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc05G0015020 AT1G12260.1 NAC 007 Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants. NAC 007;(source:Araport11) Ipc05G0015030 AT5G62390.1 BCL-2-associated athanogene 7 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance. BCL-2-associated athanogene 7;(source:Araport11) Ipc05G0015040 AT1G78980.1 STRUBBELIG-receptor family 5 0 STRUBBELIG-receptor family 5;(source:Araport11) Ipc05G0015050 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc05G0015060 AT4G25230.3 0 RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1. RPM1 interacting protein 2;(source:Araport11) Ipc05G0015070 AT2G45140.2 0 Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.The mRNA is cell-to-cell mobile. plant VAP homolog 12;(source:Araport11) Ipc05G0015080 AT5G51430.1 conserved oligomeric Golgi complex component-related / COG complex component-related Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology. conserved oligomeric Golgi complex component-related / COG complex component-like protein;(source:Araport11) Ipc05G0015090 AT5G51410.5 0 0 LUC7 N terminus domain-containing protein;(source:Araport11) Ipc05G0015100 AT4G25190.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc05G0015110 AT5G61480.1 Leucine-rich repeat protein kinase family protein Encodes PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0015120 AT5G51300.3 splicing factor-related Encodes a nuclear localized splicing factor homolog that is involved in alternative splicing of some mRNAs. splicing factor-like protein;(source:Araport11) Ipc05G0015130 AT5G61510.1 GroES-like zinc-binding alcohol dehydrogenase family protein 0 GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc05G0015140 AT5G61530.1 small G protein family protein / RhoGAP family protein 0 small G protein family protein / RhoGAP family protein;(source:Araport11) Ipc05G0015150 AT5G51290.1 Diacylglycerol kinase family protein Encodes a ceramide kinase that plays a role in modulating cell death. Diacylglycerol kinase family protein;(source:Araport11) Ipc05G0015160 AT5G51180.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0015170 AT5G07580.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive transcription factor;(source:Araport11) Ipc05G0015180 AT5G51190.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0015190 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0015200 #N/A #N/A #N/A #N/A Ipc05G0015210 AT5G61630.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0015220 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc05G0015230 AT2G22740.2 SU(VAR)3-9 homolog 6 Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 6;(source:Araport11) Ipc05G0015240 AT5G61670.2 0 Encodes a close homolog of the Cauliflower OR (Orange) protein that is located in the chloroplast of light grown organs but in the nucleus of etiolated cotyledons. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. The AtOR protein interacts directly with the PSY (phytoene synthase) protein and acts as a positive posttranscriptional regulator of its expression, thereby affecting carotenoid biosynthesis. orange protein;(source:Araport11) Ipc05G0015250 AT4G25120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3’- to 5’-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0015260 AT5G51170.1 0 0 U6 snRNA phosphodiesterase-like protein;(source:Araport11) Ipc05G0015270 AT1G57560.1 myb domain protein 50 Member of the R2R3 factor gene family. myb domain protein 50;(source:Araport11) Ipc05G0015280 AT4G17600.1 Chlorophyll A-B binding family protein Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. The mRNA is cell-to-cell mobile. Chlorophyll A-B binding family protein;(source:Araport11) Ipc05G0015290 AT5G07440.2 glutamate dehydrogenase 2 Encodes the alpha-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 2;(source:Araport11) Ipc05G0015300 AT5G19910.1 SOH1 family protein 0 SOH1 family protein;(source:Araport11) Ipc05G0015310 AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0015320 AT1G28710.4 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc05G0015330 AT1G02170.1 metacaspase 1 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 1;(source:Araport11) Ipc05G0015340 AT5G51110.1 Transcriptional coactivator/pterin dehydratase Encodes a protein involved in Rubisco assembly that also mediates Abscisic acid-dependent stress response. It is a ubiquitination target of the intracellular E3 ligase SDIR1. It selectively regulates the expression of the downstream basic region/leucine zipper motif transcription factor gene ABA-INSENSITIVE5, rather than ABA-RESPONSIVE ELEMENTS BINDING FACTOR3 (ABF3) or ABF4, to regulate ABA-mediated seed germination and the plant salt response. Transcriptional coactivator/pterin dehydratase;(source:Araport11) Ipc05G0015350 AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit Encodes the mitochondrial ATP synthase subunit delta. ATPase, F1 complex, delta/epsilon subunit;(source:Araport11) Ipc05G0015360 AT3G54190.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0015370 AT5G24910.1 cytochrome P450, family 714, subfamily A, polypeptide 1 Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs. cytochrome P450, family 714, subfamily A, polypeptide 1;(source:Araport11) Ipc05G0015380 AT5G01960.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0015390 AT3G08710.3 0 Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication. thioredoxin H-type 9;(source:Araport11) Ipc05G0015400 AT5G05200.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0015410 AT3G56400.1 WRKY DNA-binding protein 70 Member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. WRKY DNA-binding protein 70;(source:Araport11) Ipc05G0015420 AT2G40740.1 WRKY DNA-binding protein 55 member of WRKY Transcription Factor; Group III WRKY DNA-binding protein 55;(source:Araport11) Ipc05G0015430 AT1G61670.2 0 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc05G0015440 AT2G40720.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0015450 AT3G01516.2 0 0 transmembrane protein;(source:Araport11) Ipc05G0015460 AT3G56380.1 response regulator 17 response regulator 17 response regulator 17;(source:Araport11) Ipc05G0015470 AT2G40660.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0015480 AT3G51580.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0015490 AT5G05240.2 0 0 cation-transporting ATPase;(source:Araport11) Ipc05G0015500 AT5G05250.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0015510 AT5G05270.2 Chalcone-flavanone isomerase family protein 0 Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc05G0015520 AT3G10910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0015530 AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc05G0015540 AT3G10920.1 manganese superoxide dismutase 1 manganese superoxide dismutase (MSD1) manganese superoxide dismutase 1;(source:Araport11) Ipc05G0015550 AT3G56310.1 Melibiase family protein Member of Glycoside Hydrolase Family 27 (GH27)that functions as an α-galactosidase. Melibiase family protein;(source:Araport11) Ipc05G0015560 AT5G05300.1 0 IDL6 peptide is induced in response to Pathogen-Associated Molecular Patterns (PAMPs). Overexpression of IDL6 results in increased susceptibility to pathogens. hypothetical protein;(source:Araport11) Ipc05G0015570 AT2G40550.1 E2F target gene 1 Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair. E2F target protein 1 (ETG1);(source:Araport11) Ipc05G0015580 AT3G10960.1 AZA-guanine resistant1 Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2). AZA-guanine resistant1;(source:Araport11) Ipc05G0015590 #N/A #N/A #N/A #N/A Ipc05G0015600 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc05G0015610 AT5G05330.1 HMG-box (high mobility group) DNA-binding family protein Encodes a protein with a putative HMG-box domain. The high-mobility group (HMG) proteins are chromatin-associated proteins that act as architectural factors in various nucleoprotein structures, which regulate DNA-dependent processes such as transcription and recombination. Expression of this gene was not detected according to Grasser et al. (J. Mol. Biol. 2006:358, 654-664). HMG-box (high mobility group) DNA-binding family protein;(source:Araport11) Ipc05G0015620 AT2G40475.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0015630 AT2G40470.1 LOB domain-containing protein 15 LOB-domain containing protein. Involved in regulation of xylem differentiation- acts as a regulator of VND7 which is a master regulator of xylem cell differentiation. LOB domain-containing protein 15;(source:Araport11) Ipc05G0015640 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc05G0015650 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc05G0015660 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0015670 AT3G56250.2 0 0 hypothetical protein;(source:Araport11) Ipc05G0015680 AT5G14770.5 0 0 PPR repeat protein;(source:Araport11) Ipc05G0015690 AT3G10985.1 senescence associated gene 20 A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis. The mRNA is cell-to-cell mobile. senescence associated gene 20;(source:Araport11) Ipc05G0015700 AT5G05365.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0015710 AT5G22900.1 cation/H+ exchanger 3 member of Putative Na+/H+ antiporter family cation/H+ exchanger 3;(source:Araport11) Ipc05G0015720 AT5G22900.1 cation/H+ exchanger 3 member of Putative Na+/H+ antiporter family cation/H+ exchanger 3;(source:Araport11) Ipc05G0015730 AT5G22900.1 cation/H+ exchanger 3 member of Putative Na+/H+ antiporter family cation/H+ exchanger 3;(source:Araport11) Ipc05G0015740 AT2G13620.1 cation/hydrogen exchanger 15 member of Putative Na+/H+ antiporter family cation/hydrogen exchanger 15;(source:Araport11) Ipc05G0015750 AT3G56130.1 biotin/lipoyl attachment domain-containing protein 0 biotin/lipoyl attachment domain-containing protein;(source:Araport11) Ipc05G0015760 AT5G07120.2 0 Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole. sorting nexin 2B;(source:Araport11) Ipc05G0015770 AT2G40370.1 laccase 5 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 5;(source:Araport11) Ipc05G0015780 AT1G14620.1 decoy 0 decoy;(source:Araport11) Ipc05G0015790 AT2G40340.1 Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0015800 AT2G38310.1 PYR1-like 4 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. The mRNA is cell-to-cell mobile. PYR1-like 4;(source:Araport11) Ipc05G0015810 AT2G40300.1 ferritin 4 Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress. ferritin 4;(source:Araport11) Ipc05G0015820 AT2G40290.1 Eukaryotic translation initiation factor 2 subunit 1 Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. Eukaryotic translation initiation factor 2 subunit 1;(source:Araport11) Ipc05G0015830 AT5G05480.1 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein 0 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein;(source:Araport11) Ipc05G0015840 AT5G07270.1 XB3 ortholog 3 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc05G0015850 AT5G05490.2 Rad21/Rec8-like family protein Encodes a RAD21-like gene essential for meiosis. Encodes a 617 a.a. protein that is slightly shorter in the N-terminus than SYN1 BP2. Rad21/Rec8-like family protein;(source:Araport11) Ipc05G0015860 AT5G05520.1 Outer membrane OMP85 family protein 0 Outer membrane OMP85 family protein;(source:Araport11) Ipc05G0015870 AT2G38300.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc05G0015880 AT3G11090.1 LOB domain-containing protein 21 0 LOB domain-containing protein 21;(source:Araport11) Ipc05G0015890 AT5G05550.3 0 Encodes trihelix-domain transcription factor VFP5. Interacts with agrobacterium virulence protein VirF. sequence-specific DNA binding transcription factor;(source:Araport11) Ipc05G0015900 AT2G40220.1 Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0015910 AT3G11110.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0015920 AT3G11130.1 Clathrin, heavy chain CHC1 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis. Mutants also have increased dehydration tolerance which may be related to the overall slower stomatal aperture dynamics. Overall growth is affected. Clathrin, heavy chain;(source:Araport11) Ipc05G0015930 AT3G55990.1 Plant protein of unknown function (DUF828) Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). The mRNA is cell-to-cell mobile. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc05G0015940 AT3G11150.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0015950 AT5G05570.2 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc05G0015960 AT5G05580.1 fatty acid desaturase 8 Encodes a temperature sensitive plastidic fatty acid desaturase. fatty acid desaturase 8;(source:Araport11) Ipc05G0015970 AT2G40140.2 zinc finger (CCCH-type) family protein 0 zinc finger (CCCH-type) family protein;(source:Araport11) Ipc05G0015980 AT5G05600.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a protein with similarity to flavonol synthases that is involved in the detoxifcation polycyclic aromatic hydrocarbons.One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0015990 AT5G05610.2 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 1;(source:Araport11) Ipc05G0016000 AT2G40120.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0016010 AT3G55960.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0016020 AT3G55950.1 CRINKLY4 related 3 0 CRINKLY4 related 3;(source:Araport11) Ipc05G0016030 AT5G05660.1 sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors Encodes a homolog of the mammalian zinc finger transcription factor NF-X1. NF-X1-type zinc finger protein NFXL2;(source:Araport11) Ipc05G0016040 AT2G40116.1 Phosphoinositide-specific phospholipase C family protein 0 Phosphoinositide-specific phospholipase C family protein;(source:Araport11) Ipc05G0016050 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc05G0016060 AT5G10330.8 0 Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1;(source:Araport11) Ipc05G0016070 AT2G40095.2 0 0 Alpha/beta hydrolase related protein;(source:Araport11) Ipc05G0016080 AT5G05690.1 Cytochrome P450 superfamily protein Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in bri1 mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses. Cytochrome P450 superfamily protein;(source:Araport11) Ipc05G0016090 AT2G40110.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc05G0016100 AT2G40070.1 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc05G0016110 AT2G40060.1 Clathrin light chain protein Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. The mRNA is cell-to-cell mobile. Clathrin light chain protein;(source:Araport11) Ipc05G0016120 AT2G38140.1 plastid-specific ribosomal protein 4 plastid-specific ribosomal protein 4 (PSRP4) mRNA, complete The mRNA is cell-to-cell mobile. plastid-specific ribosomal protein 4;(source:Araport11) Ipc05G0016130 AT3G55870.3 0 0 ADC synthase superfamily protein;(source:Araport11) Ipc05G0016140 AT5G05740.2 ethylene-dependent gravitropism-deficient and yellow-green-like 2 S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442–454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171–179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria. ethylene-dependent gravitropism-deficient and yellow-green-like 2;(source:Araport11) Ipc05G0016150 AT2G40020.2 Nucleolar histone methyltransferase-related protein 0 Nucleolar histone methyltransferase-related protein;(source:Araport11) Ipc05G0016160 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0016170 AT2G40000.1 ortholog of sugar beet HS1 PRO-1 2 0 ortholog of sugar beet HS1 PRO-1 2;(source:Araport11) Ipc05G0016180 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0016190 AT4G00430.1 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1;(source:Araport11) Ipc05G0016200 AT3G11260.1 WUSCHEL related homeobox 5 WOX5 is a member of the Wuschel (WUS) family of homeodomain transcription factors and is required for quiescent center (QC) function and columella stem cell maintenance in the root meristem. It is expressed in the QC and moves to the columella stem cells where it represses their differentiation. WOX5 binds members of the Topless family of transcriptional co-repressors. WUSCHEL related homeobox 5;(source:Araport11) Ipc05G0016210 AT5G05780.1 RP non-ATPase subunit 8A Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity. The mRNA is cell-to-cell mobile. RP non-ATPase subunit 8A;(source:Araport11) Ipc05G0016220 AT3G55820.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc05G0016230 AT2G39980.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc05G0016240 AT1G73680.3 0 Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives. alpha dioxygenase;(source:Araport11) Ipc05G0016250 AT2G39970.1 Mitochondrial substrate carrier family protein Encodes peroxisomal membrane protein 38 (PMP38). Mutation in this protein results in enlargement of peroxisomes. Delivers NAD+ for optimal fatty acid degradation during storage oil mobilization. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc05G0016260 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0016270 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc05G0016280 AT2G38090.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc05G0016290 AT4G32870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc05G0016300 AT3G11320.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc05G0016310 AT5G01090.1 Concanavalin A-like lectin family protein 0 Concanavalin A-like lectin family protein;(source:Araport11) Ipc05G0016320 AT3G55730.1 myb domain protein 109 putative transcription factor MYB109 (MYB109) mRNA, myb domain protein 109;(source:Araport11) Ipc05G0016330 AT5G05840.1 Protein of unknown function (DUF620) 0 replication factor C subunit, putative (DUF620);(source:Araport11) Ipc05G0016340 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc05G0016350 AT1G78270.1 UDP-glucosyl transferase 85A4 0 UDP-glucosyl transferase 85A4;(source:Araport11) Ipc05G0016360 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc05G0016370 AT1G22340.1 UDP-glucosyl transferase 85A7 0 UDP-glucosyl transferase 85A7;(source:Araport11) Ipc05G0016380 AT2G39870.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0016390 AT5G22370.3 0 Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800). P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0016400 AT5G05940.1 ROP guanine nucleotide exchange factor 5 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. ROP guanine nucleotide exchange factor 5;(source:Araport11) Ipc05G0016410 AT2G15910.3 0 0 CSL zinc finger domain-containing protein;(source:Araport11) Ipc05G0016420 AT5G05950.1 maternal effect embryo arrest 60 0 maternal effect embryo arrest 60;(source:Araport11) Ipc05G0016430 AT3G24740.6 0 0 cellulose synthase, putative (DUF1644);(source:Araport11) Ipc05G0016440 AT5G02020.1 0 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). E3 ubiquitin-protein ligase RLIM-like protein;(source:Araport11) Ipc05G0016450 AT5G65890.3 0 Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques. ACT domain repeat 1;(source:Araport11) Ipc05G0016460 AT1G07410.1 RAB GTPase homolog A2B 0 RAB GTPase homolog A2B;(source:Araport11) Ipc05G0016470 AT3G53940.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc05G0016480 AT2G39830.1 DA1-related protein 2 Essential for early phloem development and function, and for root system development.DAR2 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. DA1-related protein 2;(source:Araport11) Ipc05G0016490 AT5G05980.2 DHFS-FPGS homolog B Encodes one of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic). DHFS-FPGS homolog B;(source:Araport11) Ipc05G0016500 AT2G39805.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc05G0016510 AT3G53850.2 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0016520 AT2G39770.3 0 Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc05G0016530 AT3G11400.1 eukaryotic translation initiation factor 3G1 One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). The mRNA is cell-to-cell mobile. eukaryotic translation initiation factor 3G1;(source:Araport11) Ipc05G0016540 AT2G39760.1 BTB/POZ/MATH-domains containing protein Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB/POZ/MATH-domains containing protein;(source:Araport11) Ipc05G0016550 AT2G39750.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0016560 AT2G39740.3 0 Encodes HESO1 (HEN1 suppressor 1), a terminal nucleotidyl transferase that uridylates miRNAs and siRNAs at 3′ end. HESO1-mediated 3′ uridylation destabilizes small RNAs in hen1. Nucleotidyltransferase family protein;(source:Araport11) Ipc05G0016570 AT3G11410.1 protein phosphatase 2CA Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA. protein phosphatase 2CA;(source:Araport11) Ipc05G0016580 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc05G0016590 AT4G15020.2 hAT transposon superfamily 0 hAT transposon superfamily;(source:Araport11) Ipc05G0016600 AT2G29200.2 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 1;(source:Araport11) Ipc05G0016610 AT3G11430.1 glycerol-3-phosphate acyltransferase 5 sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester. glycerol-3-phosphate acyltransferase 5;(source:Araport11) Ipc05G0016620 AT2G39720.2 0 Encodes a putative RING-H2 finger protein RHC2a. RING-H2 finger C2A;(source:Araport11) Ipc05G0016630 AT3G55530.1 RING/U-box superfamily protein Encodes an intracellular membrane localized protein with E3 ligase activity, found in the ER with the C-terminus facing the cytoplasm. It is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA. RING/U-box superfamily protein;(source:Araport11) Ipc05G0016640 AT3G55520.3 0 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc05G0016650 AT2G39705.1 ROTUNDIFOLIA like 8 0 ROTUNDIFOLIA like 8;(source:Araport11) Ipc05G0016670 AT1G74350.1 Intron maturase, type II family protein Encodes nMAT4, a maturase factor required for nad1 pre-mRNA processing and maturation. Essential for holocomplex I biogenesis in Arabidopsis mitochondria. Intron maturase, type II family protein;(source:Araport11) Ipc05G0016660 AT5G13840.2 FIZZY-related 3 0 FIZZY-related 3;(source:Araport11) Ipc05G0016680 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc05G0016690 AT5G13820.2 0 Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding (SANT) domain in C-terminus that prefers the sequence TTTAGGG. Single Myb Histone (SMH) gene family member. telomeric DNA binding protein 1;(source:Araport11) Ipc05G0016700 AT2G39700.1 expansin A4 putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A4;(source:Araport11) Ipc05G0016710 AT2G20390.1 0 0 cytochrome oxidase complex assembly protein;(source:Araport11) Ipc05G0016720 AT1G07570.5 0 Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues Protein kinase superfamily protein;(source:Araport11) Ipc05G0016730 AT2G39630.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a putative dolichyl-phosphate β-glucosyltransferase. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc05G0016740 AT3G46540.2 0 0 ENTH/VHS family protein;(source:Araport11) Ipc05G0016750 AT3G46520.2 0 Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development. actin-12;(source:Araport11) Ipc05G0016760 AT1G55460.1 DNA/RNA-binding protein Kin17, conserved region 0 DNA/RNA-binding protein Kin17, conserved region;(source:Araport11) Ipc05G0016770 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0016780 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0016790 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0016800 AT3G55370.2 OBF-binding protein 3 Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. OBF-binding protein 3;(source:Araport11) Ipc05G0016810 AT2G39550.1 Prenyltransferase family protein encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways. Prenyltransferase family protein;(source:Araport11) Ipc05G0016820 AT5G59350.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0016830 AT1G04360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0016840 AT5G06905.1 cytochrome P450, family 712, subfamily A, polypeptide 2 member of CYP712A cytochrome P450, family 712, subfamily A, polypeptide 2;(source:Araport11) Ipc05G0016850 AT2G37570.1 HSP20-like chaperones superfamily protein encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc05G0016860 AT5G59300.1 ubiquitin carrier protein 7 ubiquitin conjugating enzyme E2 ubiquitin-conjugating enzyme E2;(source:Araport11) Ipc05G0016870 AT3G55390.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc05G0016880 AT2G28760.4 0 0 UDP-XYL synthase 6;(source:Araport11) Ipc05G0016890 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc05G0016900 AT3G53610.3 RAB GTPase homolog 8 GTPase AtRAB8 (atrab8) RAB GTPase homolog 8;(source:Araport11) Ipc05G0016910 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc05G0016920 AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein Encodes a member of the zinc finger family of transcriptional regulators. It is expressed in many root tips, primary roots, cotyledons and hypocotyl. The protein is localized to the nucleus. Overexpression of ZAT11 causes increased root growth and increased sensitivity to nickel ions. The mRNA is cell-to-cell mobile. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc05G0016930 AT5G59790.2 0 SOK5 is a DUF966 domain containing protein expressed in early embryos. UPSTREAM OF FLC protein (DUF966);(source:Araport11) Ipc05G0016940 AT2G39470.1 PsbP-like protein 2 0 PsbP-like protein 2;(source:Araport11) Ipc05G0016950 AT3G55320.1 P-glycoprotein 20 0 P-glycoprotein 20;(source:Araport11) Ipc05G0016960 AT3G55280.2 ribosomal protein L23AB 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA. ribosomal protein L23AB;(source:Araport11) Ipc05G0016970 AT3G09110.1 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc05G0016980 AT5G01130.1 Protein of unknown function (DUF674) 0 hypothetical protein (DUF674);(source:Araport11) Ipc05G0016990 AT3G55260.1 beta-hexosaminidase 1 Encodes a protein with β-hexosaminidase activity (the enzyme is active with p-nitrophenyl-β-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-β-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products. beta-hexosaminidase 1;(source:Araport11) Ipc05G0017000 AT2G39450.1 Cation efflux family protein Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn2+ and Cu2+ tolerance. Cation efflux family protein;(source:Araport11) Ipc05G0017010 AT2G39420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0017020 AT5G02610.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc05G0017030 AT5G13580.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc05G0017040 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0017050 AT5G13560.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc05G0017060 AT3G12360.1 Ankyrin repeat family protein Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein;(source:Araport11) Ipc05G0017070 AT2G39340.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family Putative mRNA export factor that is highly co-expressed with PRP4KA. SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11) Ipc05G0017080 AT3G55080.1 SET domain-containing protein 0 SET domain-containing protein;(source:Araport11) Ipc05G0017090 AT3G55070.1 LisH/CRA/RING-U-box domains-containing protein 0 LisH/CRA/RING-U-box domains-containing protein;(source:Araport11) Ipc05G0017100 AT3G55060.2 0 0 CAP-gly domain linker;(source:Araport11) Ipc05G0017110 AT5G54010.1 UDP-Glycosyltransferase superfamily protein Encodes a flavonoid 3-O-glucoside:2″-O-glucosyltransferase that determines pollen-specific flavonol structure. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0017120 AT5G54060.1 UDP-glucose:flavonoid 3-o-glucosyltransferase Encodes a anthocyanin 3-O-glucoside: 2"-O-xylosyl-transferase involved in anthocyanin modification that converts cyanidin 3-O-glucoside to cyanidin 3-O-xylosyl(1->2)glucoside. Its preferred sugar donor is UDP-xylose. UDP-glucose:flavonoid 3-o-glucosyltransferase;(source:Araport11) Ipc05G0017130 AT4G27570.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0017140 AT4G27560.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0017150 AT5G54060.1 UDP-glucose:flavonoid 3-o-glucosyltransferase Encodes a anthocyanin 3-O-glucoside: 2"-O-xylosyl-transferase involved in anthocyanin modification that converts cyanidin 3-O-glucoside to cyanidin 3-O-xylosyl(1->2)glucoside. Its preferred sugar donor is UDP-xylose. UDP-glucose:flavonoid 3-o-glucosyltransferase;(source:Araport11) Ipc05G0017160 AT5G54060.1 UDP-glucose:flavonoid 3-o-glucosyltransferase Encodes a anthocyanin 3-O-glucoside: 2"-O-xylosyl-transferase involved in anthocyanin modification that converts cyanidin 3-O-glucoside to cyanidin 3-O-xylosyl(1->2)glucoside. Its preferred sugar donor is UDP-xylose. UDP-glucose:flavonoid 3-o-glucosyltransferase;(source:Araport11) Ipc05G0017170 AT4G08790.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein NIT1 amidase involved in the breakdown of deaminated glutathione (dGSH). It is active towards dGSH and dOA with a preference for dGSH. Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein;(source:Araport11) Ipc05G0017180 AT2G35240.1 plastid developmental protein DAG, putative Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. plastid developmental protein DAG;(source:Araport11) Ipc05G0017190 AT3G04470.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc05G0017200 AT5G42140.2 0 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc05G0017210 AT5G28900.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0017220 AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0017230 AT1G08620.3 0 0 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc05G0017240 AT5G28490.1 Protein of unknown function (DUF640) Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner. LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc05G0017250 AT1G08650.1 phosphoenolpyruvate carboxylase kinase 1 Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. The mRNA is cell-to-cell mobile. phosphoenolpyruvate carboxylase kinase 1;(source:Araport11) Ipc05G0017260 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0017270 AT2G45260.1 Plant protein of unknown function (DUF641) 0 myosin-4 protein (DUF641);(source:Araport11) Ipc05G0017280 AT3G04550.1 0 Encodes an ancillary chaperone protein that functions in Rubisco biogenesis. RAF1 dimers function in the assembly of the large subunit of Rubisco. Co-expression of RAF1 and rbcL in tobacco cells results in increased photosynthesis and plant growth. The mRNA is cell-to-cell mobile. rubisco accumulation factor-like protein;(source:Araport11) Ipc05G0017290 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc05G0017300 AT3G04590.2 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc05G0017310 AT2G14045.4 0 0 c-Myc-binding protein;(source:Araport11) Ipc05G0017320 AT2G36740.1 sequence-specific DNA binding transcription factors;DNA binding;DNA binding 0 DNA binding protein SWC2;(source:Araport11) Ipc05G0017330 AT5G28640.1 SSXT family protein Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors. SSXT family protein;(source:Araport11) Ipc05G0017340 AT2G31335.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0017350 AT4G03500.3 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc05G0017360 AT5G16010.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) Ipc05G0017370 AT1G63270.1 non-intrinsic ABC protein 10 Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data. non-intrinsic ABC protein 10;(source:Araport11) Ipc05G0017380 AT5G55490.9 0 Encodes a transmembrane domain containing protein that is expressed in pollen germ cells. gamete expressed protein 1;(source:Araport11) Ipc05G0017390 AT5G06600.2 ubiquitin-specific protease 12 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 12;(source:Araport11) Ipc05G0017400 AT4G27650.3 0 Encodes Arabidopsis homolog of Drosophila pelota protein. Functions in RNA the non-stop decay (NSD) and no-go decay (NGD) quality control systems that act during translation. Eukaryotic release factor 1 (eRF1) family protein;(source:Araport11) Ipc05G0017410 AT5G41550.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0017420 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc05G0017430 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc05G0017440 AT1G27180.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc05G0017450 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc05G0017460 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0017470 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0017480 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0017490 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0017500 AT3G11760.1 0 0 structural maintenance of chromosomes flexible hinge domain protein;(source:Araport11) Ipc05G0017510 AT2G32300.1 uclacyanin 1 Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. uclacyanin 1;(source:Araport11) Ipc05G0017520 AT5G06490.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0017530 AT5G06490.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0017540 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc05G0017550 AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc05G0017560 AT3G10640.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc05G0017570 AT3G44190.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc05G0017580 AT2G26230.1 uricase / urate oxidase / nodulin 35, putative Encodes a urate oxidase that is involved in peroxisome maintenance. uricase / urate oxidase / nodulin 35;(source:Araport11) Ipc05G0017590 AT3G10630.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0017600 AT1G49975.1 0 0 photosystem I reaction center subunit N;(source:Araport11) Ipc05G0017610 AT1G14520.2 myo-inositol oxygenase 1 Encodes MIOX1. Belongs to myo-inositol oxygenase gene family. myo-inositol oxygenase 1;(source:Araport11) Ipc05G0017620 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc05G0017630 AT3G52490.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0017640 AT5G04810.1 pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide which is essential during the early stages of embryo development and acts in the plastid nucleoids as the factor responsible of rps12 intron 1 trans-splicing and, indirectly, in the assembly of 70S ribosomes and plastid translation. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc05G0017650 AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0017660 AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0017670 AT5G22390.1 Protein of unknown function (DUF3049) 0 FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc05G0017680 AT3G54290.1 0 0 hemerythrin HHE cation-binding domain protein;(source:Araport11) Ipc05G0017690 AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0017700 AT3G52710.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0017710 AT5G22450.3 0 0 spectrin beta chain, brain;(source:Araport11) Ipc05G0017720 AT3G52760.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc05G0017730 AT5G42210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0017740 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0017750 AT5G03610.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0017760 AT3G56240.3 0 CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro. copper chaperone;(source:Araport11) Ipc05G0017770 AT1G44970.1 Peroxidase superfamily protein Encodes a class III peroxidase that is genetically redundant with PRX40, expressed in the tapetum, and essential for proper anther and pollen development. Peroxidase superfamily protein;(source:Araport11) Ipc05G0017780 AT2G16250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0017790 AT4G39530.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0017800 AT2G36380.1 pleiotropic drug resistance 6 0 pleiotropic drug resistance 6;(source:Araport11) Ipc05G0017810 AT2G36360.2 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc05G0017820 AT3G22430.1 0 0 RNA recognition motif XS domain protein;(source:Araport11) Ipc05G0017830 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0017840 AT3G52240.1 0 0 transcriptional regulator ATRX;(source:Araport11) Ipc05G0017850 AT5G04660.1 cytochrome P450, family 77, subfamily A, polypeptide 4 encodes a protein with cytochrome P450 domain cytochrome P450, family 77, subfamily A, polypeptide 4;(source:Araport11) Ipc05G0017860 AT4G40045.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0017870 AT3G16990.1 Haem oxygenase-like, multi-helical 0 heme oxygenase-like, multi-helical;(source:Araport11) Ipc05G0017880 AT3G54540.2 0 member of GCN subfamily general control non-repressible 4;(source:Araport11) Ipc05G0017890 AT1G08230.2 Transmembrane amino acid transporter family protein Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc05G0017900 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0017910 AT3G10550.1 Myotubularin-like phosphatases II superfamily Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P. Myotubularin-like phosphatases II superfamily;(source:Araport11) Ipc05G0017920 AT3G52230.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0017930 AT5G04520.1 Protein of unknown function DUF455 0 3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455);(source:Araport11) Ipc05G0017940 AT4G24350.1 Phosphorylase superfamily protein 0 Phosphorylase superfamily protein;(source:Araport11) Ipc05G0017950 AT4G35740.1 DEAD/DEAH box RNA helicase family protein Encodes RECQ3, an ATP-dependent helicase. DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc05G0017960 AT4G35740.2 DEAD/DEAH box RNA helicase family protein Encodes RECQ3, an ATP-dependent helicase. DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc05G0017970 AT2G05840.1 20S proteasome subunit PAA2 Encodes 20S proteasome subunit PAA2 (PAA2). 20S proteasome subunit PAA2;(source:Araport11) Ipc05G0017980 AT1G54115.1 cation calcium exchanger 4 Involved in cation (Na and K) homeostasis. cation calcium exchanger 4;(source:Araport11) Ipc05G0017990 AT2G05910.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc05G0018000 AT5G20635.1 0 Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development. guanine nucleotide-binding protein subunit gamma;(source:Araport11) Ipc05G0018010 AT2G05920.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc05G0018020 AT5G20570.1 RING-box 1 Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein. RING-box 1;(source:Araport11) Ipc05G0018030 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc05G0018040 AT2G06005.1 FRIGIDA interacting protein 1 Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time. FRIGIDA interacting protein 1;(source:Araport11) Ipc05G0018050 AT5G21940.1 0 0 hybrid signal transduction histidine kinase M-like protein;(source:Araport11) Ipc05G0018060 AT3G45200.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0018070 AT5G01160.2 0 Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. RING/U-box superfamily protein;(source:Araport11) Ipc05G0018080 AT5G45550.1 Mob1/phocein family protein Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling. Mob1/phocein family protein;(source:Araport11) Ipc05G0018090 AT5G35560.2 0 0 DENN (AEX-3) domain-containing protein;(source:Araport11) Ipc05G0018100 AT5G09380.2 0 0 RNA polymerase III RPC4;(source:Araport11) Ipc05G0018110 AT2G31670.1 Stress responsive alpha-beta barrel domain protein 0 Stress responsive alpha-beta barrel domain protein;(source:Araport11) Ipc05G0018120 AT2G31670.1 Stress responsive alpha-beta barrel domain protein 0 Stress responsive alpha-beta barrel domain protein;(source:Araport11) Ipc05G0018130 AT1G17455.2 ELF4-like 4 0 ELF4-like 4;(source:Araport11) Ipc05G0018140 AT2G06510.1 replication protein A 1A Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I. replication protein A 1A;(source:Araport11) Ipc05G0018150 AT2G06520.1 photosystem II subunit X Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX. photosystem II subunit X;(source:Araport11) Ipc05G0018160 AT5G17600.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0018170 AT2G06530.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc05G0018180 AT3G13980.1 0 0 SKI/DACH domain protein;(source:Araport11) Ipc05G0018190 AT5G20510.1 alfin-like 5 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 5;(source:Araport11) Ipc05G0018200 AT5G20610.1 0 Encodes a member of a plant specific C2 domain containing gene family. Along with PMI, it appears to be involved in chloroplast and nuclear relocation in response to light. EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc05G0018210 AT4G29830.1 Transducin/WD40 repeat-like superfamily protein VIP3 protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin. Also known as SKI8, a component of the SKI complex involved in exosome mediated RNA degredation. Member of PAF-C complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0018220 AT5G57070.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0018230 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc05G0018240 AT4G29810.1 MAP kinase kinase 2 encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2;(source:Araport11) Ipc05G0018250 AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0018260 AT5G57035.1 U-box domain-containing protein kinase family protein 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc05G0018270 AT5G57030.1 Lycopene beta/epsilon cyclase protein Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase Lycopene beta/epsilon cyclase protein;(source:Araport11) Ipc05G0018280 AT1G72740.2 Homeodomain-like/winged-helix DNA-binding family protein Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc05G0018290 AT4G26100.1 casein kinase 1 Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization (member of CKL-B group). casein kinase 1;(source:Araport11) Ipc05G0018300 AT2G19450.1 membrane bound O-acyl transferase (MBOAT) family protein Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. Its preferred substrate is linolenoyl-CoA (C18:3-CoA). membrane bound O-acyl transferase (MBOAT) family protein;(source:Araport11) Ipc05G0018310 AT2G19430.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1;(source:Araport11) Ipc05G0018320 AT2G26150.4 0 member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2;(source:Araport11) Ipc05G0018330 AT5G56940.1 Ribosomal protein S16 family protein 0 Ribosomal protein S16 family protein;(source:Araport11) Ipc05G0018340 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc05G0018360 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc05G0018350 #N/A #N/A #N/A #N/A Ipc05G0018370 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc05G0018380 AT4G26110.1 nucleosome assembly protein1;1 Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein1;(source:Araport11) Ipc05G0018390 AT3G47590.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0018400 AT3G47590.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0018410 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0018420 AT5G54090.1 DNA mismatch repair protein MutS, type 2 0 DNA mismatch repair protein MutS, type 2;(source:Araport11) Ipc05G0018430 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc05G0018440 AT5G56970.1 cytokinin oxidase 3 It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3;(source:Araport11) Ipc05G0018450 AT5G56980.1 0 0 cotton fiber protein;(source:Araport11) Ipc05G0018460 AT1G60430.3 0 0 actin-related protein C3;(source:Araport11) Ipc05G0018470 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0018480 AT4G29735.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0018490 AT5G56880.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0018500 AT4G29720.1 polyamine oxidase 5 0 polyamine oxidase 5;(source:Araport11) Ipc05G0018510 #N/A #N/A #N/A #N/A Ipc05G0018520 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc05G0018530 AT4G26150.1 cytokinin-responsive gata factor 1 Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression. cytokinin-responsive gata factor 1;(source:Araport11) Ipc05G0018540 AT4G29670.1 atypical CYS HIS rich thioredoxin 2 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. atypical CYS HIS rich thioredoxin 2;(source:Araport11) Ipc05G0018550 AT2G19570.1 cytidine deaminase 1 Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds. cytidine deaminase 1;(source:Araport11) Ipc05G0018560 AT4G29590.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0018570 AT2G19600.1 K+ efflux antiporter 4 member of Putative potassium proton antiporter family K+ efflux antiporter 4;(source:Araport11) Ipc05G0018580 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc05G0018590 AT5G56780.1 effector of transcription2 Encodes a transcriptional regulator that is required for the induction of dormancy during late seed development.ET2 contains DNA and Zinc binding domains and is involved in DNA methylation. ET2 may function in DNA repair. effector of transcription2;(source:Araport11) Ipc05G0018600 AT4G29530.1 Pyridoxal phosphate phosphatase-related protein Encodes a thiamin monophosphate phosphatase. Knockouts show no visible defects either in morphology or thiamin, ThMP and ThDP levels suggesting that Arabidopsis at least one other source of ThMPase activity. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc05G0018610 AT5G11780.1 0 0 SNF2 domain protein;(source:Araport11) Ipc05G0018620 AT4G29520.1 0 SES1 is an ER localized chaperone involved in salt and heat stress response. nucleophosmin;(source:Araport11) Ipc05G0018630 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc05G0018640 AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65b. U2 snRNP auxilliary factor, large subunit, splicing factor;(source:Araport11) Ipc05G0018660 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc05G0018670 AT4G26200.1 1-amino-cyclopropane-1-carboxylate synthase 7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7;(source:Araport11) Ipc05G0018680 AT3G14430.1 0 0 GRIP/coiled-coil protein;(source:Araport11) Ipc05G0018700 AT2G19680.2 Mitochondrial ATP synthase subunit G protein 0 Mitochondrial ATP synthase subunit G protein;(source:Araport11) Ipc05G0018720 AT1G04260.1 CAMV movement protein interacting protein 7 Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors. CAMV movement protein interacting protein 7;(source:Araport11) Ipc05G0018740 AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0019240 AT2G19740.1 Ribosomal protein L31e family protein 0 Ribosomal protein L31e family protein;(source:Araport11) Ipc05G0018750 AT3G04570.1 AT-hook motif nuclear-localized protein 19 0 AT-hook motif nuclear-localized protein 19;(source:Araport11) Ipc05G0019260 AT2G19830.2 0 0 SNF7 family protein;(source:Araport11) Ipc05G0018760 AT1G12370.1 photolyase 1 encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele photolyase 1;(source:Araport11) Ipc05G0018770 AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc05G0018780 AT4G29210.1 gamma-glutamyl transpeptidase 4 The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32. gamma-glutamyl transpeptidase 4;(source:Araport11) Ipc05G0018800 AT2G19790.1 SNARE-like superfamily protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. SNARE-like superfamily protein;(source:Araport11) Ipc05G0018820 AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc05G0018840 AT4G29270.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc05G0019310 AT4G29270.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc05G0019330 AT4G29310.1 Protein of unknown function (DUF1005) 0 DUF1005 family protein (DUF1005);(source:Araport11) Ipc05G0018850 AT1G31870.2 0 0 pre-mRNA-splicing factor of RES complex protein;(source:Araport11) Ipc05G0019360 AT3G44200.2 0 Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. serine/threonine-protein kinase NEK5;(source:Araport11) Ipc05G0018860 AT3G50350.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc05G0018880 AT2G19760.1 profilin 1 first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues. profilin 1;(source:Araport11) Ipc05G0018900 AT5G56580.1 MAP kinase kinase 6 Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6;(source:Araport11) Ipc05G0018920 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0018940 AT5G19730.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0019370 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc05G0018960 AT2G37410.2 translocase inner membrane subunit 17-2 Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway. translocase inner membrane subunit 17-2;(source:Araport11) Ipc05G0018980 AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc05G0018990 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc05G0019000 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc05G0019010 AT2G31620.1 Receptor-like protein kinase-related family protein 0 Receptor-like protein kinase-related family protein;(source:Araport11) Ipc05G0019020 AT1G52140.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc05G0019030 AT5G19680.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0019040 AT1G77180.2 chromatin protein family Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress. SKIP lengthens period of the circadian clock by impairing the alternative splicing of PRR7 and PRR9. SKIP regulates the splicing of SEF pre-mRNA and suppresses flowering by activation of FLC. chromatin protein family;(source:Araport11) Ipc05G0019050 AT4G32800.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0019060 AT5G37000.1 Exostosin family protein 0 glycosyltransferase family exostosin protein;(source:Araport11) Ipc05G0019070 AT5G54700.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc05G0019080 AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein Promotes the splicing of chloroplast group II introns. Splices clpP-1 and ropC1 introns. RNA-binding CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc05G0019090 AT4G28910.3 novel interactor of JAZ Encodes a transcriptional repressor that functions in the jasmonic acid (JA) signalling pathway, root development, and has a key role in leaf development, likely due to the transcriptional regulation of CYCD3 expression. Putative interactor of JAZ;(source:Araport11) Ipc05G0019100 AT4G28890.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0019110 AT2G20050.1 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases 0 protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein;(source:Araport11) Ipc05G0019120 AT2G20050.1 protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases 0 protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein;(source:Araport11) Ipc05G0019130 AT4G28850.1 xyloglucan endotransglucosylase/hydrolase 26 0 xyloglucan endotransglucosylase/hydrolase 26;(source:Araport11) Ipc05G0019140 AT5G19580.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc05G0019150 AT5G19580.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc05G0019160 AT5G19580.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc05G0019170 AT4G29060.1 elongation factor Ts family protein 0 elongation factor Ts family protein;(source:Araport11) Ipc05G0019180 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc14G0002210 AT1G31640.1 AGAMOUS-like 92 A paternally expressed imprinted gene. AGAMOUS-like 92;(source:Araport11) Ipc14G0002230 AT4G26965.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0 NADH:ubiquinone oxidoreductase, 17.2kDa subunit;(source:Araport11) Ipc14G0002220 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc14G0002240 AT1G12610.1 Integrase-type DNA-binding superfamily protein Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0002250 AT5G52020.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0002260 AT4G23030.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc14G0002270 AT5G52060.1 BCL-2-associated athanogene 1 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 1;(source:Araport11) Ipc14G0002280 AT1G12640.1 MBOAT (membrane bound O-acyl transferase) family protein Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds. MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11) Ipc14G0002290 AT1G17680.3 0 0 tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc14G0002300 AT4G25515.1 SEUSS-like 3 0 SEUSS-like 3;(source:Araport11) Ipc14G0002320 AT1G63090.1 phloem protein 2-A11 0 phloem protein 2-A11;(source:Araport11) Ipc14G0002310 AT1G12710.1 phloem protein 2-A12 This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities. phloem protein 2-A12;(source:Araport11) Ipc14G0002330 AT3G03260.1 homeodomain GLABROUS 8 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. homeodomain GLABROUS 8;(source:Araport11) Ipc14G0002340 AT3G57780.5 0 0 nucleolar-like protein;(source:Araport11) Ipc14G0002350 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc14G0002360 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0002370 AT1G63100.2 0 0 GRAS family transcription factor;(source:Araport11) Ipc14G0002380 AT4G11740.1 Ubiquitin-like superfamily protein Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc14G0002390 AT1G63110.1 GPI transamidase subunit PIG-U 0 GPI transamidase subunit PIG-U;(source:Araport11) Ipc14G0002400 AT3G02280.3 0 0 Flavodoxin family protein;(source:Araport11) Ipc14G0002410 AT1G12740.1 cytochrome P450, family 87, subfamily A, polypeptide 2 encodes a protein with cytochrome P450 domain cytochrome P450, family 87, subfamily A, polypeptide 2;(source:Araport11) Ipc14G0002420 AT1G07705.2 NOT2 / NOT3 / NOT5 family 0 NOT2 / NOT3 / NOT5 family;(source:Araport11) Ipc14G0002430 AT4G23060.1 IQ-domain 22 0 IQ-domain 22;(source:Araport11) Ipc14G0002440 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0002450 AT2G37125.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc14G0002460 AT2G41475.1 Embryo-specific protein 3, (ATS3) 0 Embryo-specific protein 3, (ATS3);(source:Araport11) Ipc14G0002470 AT1G63120.1 RHOMBOID-like 2 AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2;(source:Araport11) Ipc14G0002480 AT2G36620.1 ribosomal protein L24 RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020). ribosomal protein L24;(source:Araport11) Ipc14G0002490 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc14G0002500 AT1G63160.1 replication factor C 2 0 replication factor C 2;(source:Araport11) Ipc14G0002510 AT1G60440.2 0 The gene AT1G60440 encodes pantothenate kinase 1. Its molecular function was shown to phosphorylate pantothenate to form 4?-phosphopantothenate. pantothenate kinase 1;(source:Araport11) Ipc14G0002520 AT5G54750.1 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc14G0002530 AT4G11670.4 0 0 DNA topoisomerase 4 subunit B (DUF810);(source:Araport11) Ipc14G0002540 AT2G45760.1 BON association protein 2 encodes a protein that is similar to BONZAI1-binding protein BAP1. BON association protein 2;(source:Araport11) Ipc14G0002550 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0002560 AT4G11660.1 winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc14G0002570 AT4G11300.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc14G0002580 AT1G12770.2 0 Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0002590 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002600 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002610 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002620 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002630 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002640 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002650 AT4G11730.1 Cation transporter/ E1-E2 ATPase family protein 0 Cation transporter/ E1-E2 ATPase family protein;(source:Araport11) Ipc14G0002660 AT3G56510.5 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0002670 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002680 AT4G11650.1 osmotin 34 osmotin-like protein osmotin 34;(source:Araport11) Ipc14G0002690 AT5G52230.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 13;(source:Araport11) Ipc14G0002700 AT4G20330.1 Transcription initiation factor TFIIE, beta subunit 0 Transcription initiation factor TFIIE, beta subunit;(source:Araport11) Ipc14G0002710 AT1G63250.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc14G0002720 #N/A #N/A #N/A #N/A Ipc14G0002730 AT2G24440.1 selenium binding 0 selenium binding protein;(source:Araport11) Ipc14G0002740 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0002750 AT2G45460.3 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc14G0002760 AT1G63260.2 tetraspanin10 Member of TETRASPANIN family tetraspanin10;(source:Araport11) Ipc14G0002770 AT1G12800.1 Nucleic acid-binding, OB-fold-like protein SDP is a chloroplast localized RNA binding protein that is required for plastid rRNA processing. Plants harboring a mutation in SDP have numerous defects including reduced chlorophyll content, poor growth, yellow leaves and abnormal chloroplasts. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0002780 AT2G45800.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc14G0002790 AT4G00660.2 RNAhelicase-like 8 0 RNAhelicase-like 8;(source:Araport11) Ipc14G0002800 AT4G35420.1 dihydroflavonol 4-reductase-like1 Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production. dihydroflavonol 4-reductase-like1;(source:Araport11) Ipc14G0002810 AT2G20580.1 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile. 26S proteasome regulatory subunit S2 1A;(source:Araport11) Ipc14G0002820 AT2G20580.1 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile. 26S proteasome regulatory subunit S2 1A;(source:Araport11) Ipc14G0002830 AT1G63300.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc14G0002840 AT3G14260.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc14G0002850 AT1G63430.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0002860 AT4G11640.1 serine racemase Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases. serine racemase;(source:Araport11) Ipc14G0002870 AT5G41210.1 glutathione S-transferase THETA 1 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 1;(source:Araport11) Ipc14G0002880 AT5G41210.1 glutathione S-transferase THETA 1 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 1;(source:Araport11) Ipc14G0002890 AT5G41210.1 glutathione S-transferase THETA 1 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 1;(source:Araport11) Ipc14G0002900 AT2G25080.1 glutathione peroxidase 1 Encodes glutathione peroxidase. The mRNA is cell-to-cell mobile. glutathione peroxidase 1;(source:Araport11) Ipc14G0002910 AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc14G0002920 AT2G45850.2 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc14G0002930 AT4G23100.3 glutamate-cysteine ligase Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective. glutamate-cysteine ligase;(source:Araport11) Ipc14G0002940 #N/A #N/A #N/A #N/A Ipc14G0002950 AT5G41270.1 0 0 RNase P Rpr2/Rpp21 subunit domain protein;(source:Araport11) Ipc14G0002960 AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein 0 bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc14G0002970 AT4G23330.4 0 0 hypothetical protein;(source:Araport11) Ipc14G0002980 AT5G41315.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.GL3 interacts with JAZ and DELLA proteins to regulate trichome initiation. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0002990 AT4G32350.3 0 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc14G0003000 AT3G16060.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc14G0003010 AT3G24520.1 heat shock transcription factor C1 member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor C1;(source:Araport11) Ipc14G0003020 AT1G25370.2 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc14G0003030 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0003040 AT5G55740.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0003050 AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc14G0003060 AT1G10747.1 Maternally expressed gene (MEG) family protein Encodes a Maternally expressed gene (MEG) family protein maternally expressed family protein;(source:Araport11) Ipc14G0003070 AT2G03500.1 Homeodomain-like superfamily protein Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression. Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0003080 AT5G19970.1 0 0 GRAS family transcription factor family protein;(source:Araport11) Ipc14G0003090 AT1G31430.2 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc14G0003100 AT5G27600.1 long-chain acyl-CoA synthetase 7 Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. long-chain acyl-CoA synthetase 7;(source:Araport11) Ipc14G0003110 AT2G02120.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc14G0003120 AT1G52740.1 histone H2A protein 9 Encodes HTA9, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA11) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z. histone H2A protein 9;(source:Araport11) Ipc14G0003130 AT5G19990.3 0 26S proteasome AAA-ATPase subunitThe mRNA is cell-to-cell mobile. regulatory particle triple-A ATPase 6A;(source:Araport11) Ipc14G0003140 AT3G27890.1 NADPH:quinone oxidoreductase Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay. NADPH:quinone oxidoreductase;(source:Araport11) Ipc14G0003150 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc14G0003160 AT5G48620.6 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0003170 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc14G0003180 AT3G27890.1 NADPH:quinone oxidoreductase Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay. NADPH:quinone oxidoreductase;(source:Araport11) Ipc14G0003190 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0003200 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc14G0003210 AT2G26830.1 Protein kinase superfamily protein Encodes a member of a small family of choline/ethanolamine kinases that is localized to the plasma membrane. Homozygous loss of function alleles are embryo lethal. Overexpression results in altered phospholipid levels suggesting a critical role in phospholipid biosynthesis. Protein kinase superfamily protein;(source:Araport11) Ipc14G0003220 AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein SAGL1 is a member of a small family of KELCH domain containing proteins. Loss of function mutants show increased lignin and anthocyanin production suggesting a role in regulation of phenylpropanoid biosynthesis. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc14G0003230 AT5G20120.2 0 0 testis- and ovary-specific PAZ domain protein;(source:Araport11) Ipc14G0003240 AT5G20170.1 RNA polymerase II transcription mediators 0 RNA polymerase II transcription mediator;(source:Araport11) Ipc14G0003250 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0003260 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0003270 AT1G23350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0003280 AT4G20770.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0003290 AT2G02160.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc14G0003300 AT1G15410.2 0 0 aspartate-glutamate racemase family;(source:Araport11) Ipc14G0003310 AT1G15410.2 0 0 aspartate-glutamate racemase family;(source:Araport11) Ipc14G0003320 AT3G58960.1 F-box/RNI-like/FBD-like domains-containing protein 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc14G0003330 AT5G07930.2 MEI2 C-terminal RRM only like 2 A member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only. MEI2 C-terminal RRM only like 2;(source:Araport11) Ipc14G0003340 AT2G26695.2 0 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc14G0003350 AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0003360 AT5G25940.1 early nodulin-related 0 early nodulin-like protein;(source:Araport11) Ipc14G0003370 AT5G25940.1 early nodulin-related 0 early nodulin-like protein;(source:Araport11) Ipc14G0003380 #N/A #N/A #N/A #N/A Ipc14G0003390 AT1G75125.1 0 0 plastid transcriptionally active protein;(source:Araport11) Ipc14G0003400 AT5G57610.1 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc14G0003410 AT4G35335.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc14G0003420 AT5G24600.1 Protein of unknown function, DUF599 0 TRP-like ion channel protein (Protein of unknown function, DUF599);(source:Araport11) Ipc14G0003430 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0003440 AT2G18950.1 homogentisate phytyltransferase 1 Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading. homogentisate phytyltransferase 1;(source:Araport11) Ipc14G0003450 AT5G20050.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0003460 AT5G07490.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0003470 AT4G32440.1 Plant Tudor-like RNA-binding protein 0 Plant Tudor-like RNA-binding protein;(source:Araport11) Ipc14G0003480 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc14G0003490 AT5G55190.1 RAN GTPase 3 A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3;(source:Araport11) Ipc14G0003500 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0003510 AT5G63830.1 HIT-type Zinc finger family protein 0 HIT-type Zinc finger family protein;(source:Araport11) Ipc14G0003520 AT2G26650.1 K+ transporter 1 Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). K+ transporter 1;(source:Araport11) Ipc14G0003530 AT2G25570.3 binding 0 binding protein;(source:Araport11) Ipc14G0003540 AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0003550 AT2G25570.3 binding 0 binding protein;(source:Araport11) Ipc14G0003560 AT2G34160.1 Alba DNA/RNA-binding protein 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc14G0003570 AT4G32400.1 Mitochondrial substrate carrier family protein Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc14G0003580 AT4G32430.1 Pentatricopeptide repeat (PPR) superfamily protein GRS1 is a mitochondrial PLS-type PRR protein required for RNA editing and plant development. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0003590 AT2G26150.3 0 member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2;(source:Araport11) Ipc14G0003600 AT2G26690.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0003610 AT5G25400.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc14G0003620 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0003630 AT5G16970.1 alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls alkenal reductase;(source:Araport11) Ipc14G0003640 AT5G51200.2 0 0 nuclear pore complex protein (DUF3414);(source:Araport11) Ipc14G0003650 AT1G80140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0003660 AT5G03100.2 0 F-box/RNI-like superfamily protein, expressed in the peroxisome. F-box/RNI-like superfamily protein;(source:Araport11) Ipc14G0003670 AT2G26670.1 Plant haem oxygenase (decyclizing) family protein Encodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast. Plant heme oxygenase (decyclizing) family protein;(source:Araport11) Ipc14G0003680 AT3G55410.2 0 0 2-oxoglutarate dehydrogenase, E1 component;(source:Araport11) Ipc14G0003690 AT3G15760.1 0 0 cytochrome P450 family protein;(source:Araport11) Ipc14G0003700 AT5G20180.4 0 0 Ribosomal protein L36;(source:Araport11) Ipc14G0003710 AT5G25360.3 0 0 hypothetical protein;(source:Araport11) Ipc14G0003720 AT1G78380.1 glutathione S-transferase TAU 19 Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. glutathione S-transferase TAU 19;(source:Araport11) Ipc14G0003730 AT2G25490.1 EIN3-binding F box protein 1 Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile. EIN3-binding F box protein 1;(source:Araport11) Ipc14G0003740 AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0003750 AT5G20200.1 nucleoporin-related 0 nucleoporin-like protein;(source:Araport11) Ipc14G0003760 AT2G26580.2 plant-specific transcription factor YABBY family protein 0 plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc14G0003770 #N/A #N/A #N/A #N/A Ipc14G0003780 AT3G15790.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 11;(source:Araport11) Ipc14G0003790 AT4G02530.1 chloroplast thylakoid lumen protein MPH2 is a green lineage-specific thylakoid lumen protein required for photosynthetic acclimation of PSII to stressful light conditions (PMID:28874535). chloroplast thylakoid lumen protein;(source:Araport11) Ipc14G0003800 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0003810 AT2G26600.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc14G0003820 AT5G07475.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc14G0003830 AT3G24150.2 0 0 hypothetical protein;(source:Araport11) Ipc14G0003840 AT3G33530.4 0 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc14G0003850 AT1G78800.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0003860 AT4G39640.2 gamma-glutamyl transpeptidase 1 The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. gamma-glutamyl transpeptidase 1;(source:Araport11) Ipc14G0003870 AT5G42900.2 cold regulated gene 27 0 cold regulated protein 27;(source:Araport11) Ipc14G0003880 AT3G50310.1 mitogen-activated protein kinase kinase kinase 20 Encodes a member of MEKK subfamily. Target promoter of the male germline-specific transcription factor DUO1. Involved in osmotic stress response via regulation of MPK6 activity. It also plays an important role in regulating cell division and cell elongation in the primary root meristematic and elongation areas. Mutants show defects in root microtubule organization.It phosphorylates MPK18 and MKK3.It is a positive regulator of ABA-induced stomatal closure that acts by phosphorylating MKK5. mitogen-activated protein kinase kinase kinase 20;(source:Araport11) Ipc14G0003890 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0003900 AT2G06050.3 oxophytodienoate-reductase 3 Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can restore the fertility of opr3 plants by inducing filament elongation and anther dehiscence. oxophytodienoate-reductase 3;(source:Araport11) Ipc14G0003910 AT5G35430.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0003920 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc14G0003930 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0003940 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0003950 #N/A #N/A #N/A #N/A Ipc14G0003960 AT1G53440.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc14G0003970 AT5G32440.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc14G0003980 AT3G15880.3 WUS-interacting protein 2 0 WUS-interacting protein 2;(source:Araport11) Ipc14G0003990 AT3G25030.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0004000 AT2G02780.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0004010 AT1G14410.1 ssDNA-binding transcriptional regulator Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length. ssDNA-binding transcriptional regulator;(source:Araport11) Ipc14G0004020 AT5G58980.1 Neutral/alkaline non-lysosomal ceramidase 0 Neutral/alkaline non-lysosomal ceramidase;(source:Araport11) Ipc14G0004030 AT5G04420.3 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc14G0004040 AT4G32285.2 ENTH/ANTH/VHS superfamily protein Putative clathrin assembly protein, component of TPLATE complex that functions in clathrin-mediated endocytosis. ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc14G0004050 AT2G02120.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc14G0004060 AT5G48780.1 disease resistance protein (TIR-NBS class) 0 disease resistance protein (TIR-NBS class);(source:Araport11) Ipc14G0004070 #N/A #N/A #N/A #N/A Ipc14G0004080 AT5G47430.5 0 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc14G0004090 AT1G80760.1 NOD26-like intrinsic protein 6;1 Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously. NOD26-like intrinsic protein 6;(source:Araport11) Ipc14G0004100 AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein Leucine rich repeat protein that also contains an adenylate cyclase catalytic core motif. Capable of converting ATP to cAMP in vitro. Mutants show increased susceptibility to fungal pathogens. LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc14G0004110 AT4G13630.2 Protein of unknown function, DUF593 0 zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc14G0004120 #N/A #N/A #N/A #N/A Ipc14G0004130 AT2G30330.1 GCN5L1 family protein Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport. GCN5L1 family protein;(source:Araport11) Ipc14G0004140 AT2G11520.1 calmodulin-binding receptor-like cytoplasmic kinase 3 high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 3;(source:Araport11) Ipc14G0004150 AT2G39350.1 ABC-2 type transporter family protein Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). ABC-2 type transporter family protein;(source:Araport11) Ipc14G0004160 AT2G02130.1 low-molecular-weight cysteine-rich 68 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. The mRNA is cell-to-cell mobile. low-molecular-weight cysteine-rich 68;(source:Araport11) Ipc14G0004170 AT2G02120.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc14G0004180 AT2G31953.1 low-molecular-weight cysteine-rich 76 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 76;(source:Araport11) Ipc14G0004190 AT1G61760.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc14G0004200 AT2G02120.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc14G0004210 AT2G02130.1 low-molecular-weight cysteine-rich 68 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. The mRNA is cell-to-cell mobile. low-molecular-weight cysteine-rich 68;(source:Araport11) Ipc14G0004220 AT2G02120.1 Scorpion toxin-like knottin superfamily protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Scorpion toxin-like knottin superfamily protein;(source:Araport11) Ipc14G0004230 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0004240 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0004250 AT2G31953.1 low-molecular-weight cysteine-rich 76 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 76;(source:Araport11) Ipc14G0004260 AT2G31953.1 low-molecular-weight cysteine-rich 76 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 76;(source:Araport11) Ipc14G0004270 AT2G37500.1 arginine biosynthesis protein ArgJ family 0 arginine biosynthesis protein ArgJ family;(source:Araport11) Ipc14G0004280 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc14G0004290 AT2G31953.1 low-molecular-weight cysteine-rich 76 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 76;(source:Araport11) Ipc14G0004300 AT1G05500.1 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc14G0004310 AT5G20270.1 heptahelical transmembrane protein1 heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors heptahelical transmembrane protein1;(source:Araport11) Ipc14G0004320 AT5G34850.1 purple acid phosphatase 26 Encodes a root-secreted purple acid phosphatase precursor involved in extracellular phosphate-scavenging. purple acid phosphatase 26;(source:Araport11) Ipc14G0004330 AT3G13450.1 Transketolase family protein branched chain alpha-keto acid dehydrogenase E1 beta Transketolase family protein;(source:Araport11) Ipc14G0004340 AT5G20300.5 0 Encodes Toc90, part of the TOC (translocon at the outer chloroplast membrane) machinery involved in the import of nucleus-encoded proteins into the chloroplast. Avirulence induced gene (AIG1) family protein;(source:Araport11) Ipc14G0004350 AT1G15710.1 prephenate dehydrogenase family protein 0 prephenate dehydrogenase family protein;(source:Araport11) Ipc14G0004360 AT1G15690.1 Inorganic H pyrophosphatase family protein Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1. The mRNA is cell-to-cell mobile. Inorganic H pyrophosphatase family protein;(source:Araport11) Ipc14G0004370 AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc14G0004380 AT1G21970.1 Histone superfamily protein Transcriptional activator of genes required for both embryo maturation and cellular differentiation. Sequence is similar to HAP3 subunit of the CCAAT-box binding factor. HAP3 subunit is divided into three domains: an amino-terminal A domain, a central B domain, and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central, B domain. LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation. It was sufficient to induce embryogenic programs in vegetative cells, suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development. Mutants are desiccation intolerant, have trichomes on cotyledons and exhibit precocious meristem activation. Levels of the ABI3 and FUS3 transcripts were significantly reduced in developing siliques of the lec1-1 mutants, indicating that LEC1 down-regulates FUS3 and ABI3.When LEC1 is overexpressed from an inducible promoter, the expression of numerous genes involved in fatty acid biosynthesis is increased suggesting a role in positive regulation of FA biosynthesis. Histone superfamily protein;(source:Araport11) Ipc14G0004390 AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11) Ipc14G0004400 AT4G32060.1 calcium-binding EF hand family protein Encodes an EF-hand protein with homology to constituents of the mitochondrial Ca2+ uniporter machinery in mammals. MICU binds Ca2+ and localizes to the mitochondria in Arabidopsis. It is a negative regulator of mitochondrial calcium uptake. Mutants display elevated matrix calcium at steady state and modified calcium transient kinetics in vivo. calcium-binding EF hand family protein;(source:Araport11) Ipc14G0004410 AT1G80530.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0004420 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0004430 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0004440 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0004450 AT2G41040.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0004460 AT5G40170.1 receptor like protein 54 0 receptor like protein 54;(source:Araport11) Ipc14G0004470 AT4G13920.1 receptor like protein 50 0 receptor like protein 50;(source:Araport11) Ipc14G0004480 AT3G62660.1 galacturonosyltransferase-like 7 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 7;(source:Araport11) Ipc14G0004490 AT5G45540.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc14G0004500 AT4G13920.1 receptor like protein 50 0 receptor like protein 50;(source:Araport11) Ipc14G0004510 AT1G06220.3 0 Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS.The mRNA is cell-to-cell mobile. Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc14G0004520 AT5G45290.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0004530 AT2G15580.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0004540 AT1G55130.1 Endomembrane protein 70 protein family Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Endomembrane protein 70 protein family;(source:Araport11) Ipc14G0004550 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0004560 AT3G50610.2 0 0 DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11) Ipc14G0004570 AT5G51350.1 Leucine-rich repeat transmembrane protein kinase family protein Encodes a receptor-like kinase that represses secondary growth, the production of secondary vascular tissues. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc13G0016470 AT2G44480.1 beta glucosidase 17 0 beta glucosidase 17;(source:Araport11) Ipc13G0016480 ATCG00170.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-2 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc13G0016490 AT1G26370.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc13G0016500 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016520 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016530 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0016540 AT3G14110.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0016550 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0016560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0016570 AT3G52690.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc13G0016580 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc13G0016590 AT4G26940.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) IpcGene21880 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) IpcGene21881 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0000010 AT2G13610.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) IpcGene21888 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000050 AT1G04625.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0000610 AT1G76980.1 0 0 patatin-like phospholipase domain protein;(source:Araport11) Ipc07G0000620 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0000630 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0000640 AT2G31800.1 Integrin-linked protein kinase family 0 Integrin-linked protein kinase family;(source:Araport11) Ipc11G0012330 AT4G04885.1 PCF11P-similar protein 4 Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time. PCF11P-similar protein 4;(source:Araport11) Ipc11G0012320 AT3G02850.1 STELAR K+ outward rectifier Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+. Involved in response to low potassium. STELAR K+ outward rectifier;(source:Araport11) Ipc11G0012310 AT1G80560.1 isopropylmalate dehydrogenase 2 The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. The mRNA is cell-to-cell mobile. isopropylmalate dehydrogenase 2;(source:Araport11) Ipc11G0012300 AT5G47860.1 Protein of unknown function (DUF1350) 0 Gut esterase (DUF1350);(source:Araport11) Ipc11G0012290 AT5G47900.9 0 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc11G0012280 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc11G0012270 AT1G29880.1 glycyl-tRNA synthetase / glycine--tRNA ligase 0 glycyl-tRNA synthetase / glycine-tRNA ligase;(source:Araport11) Ipc11G0012260 AT5G61960.9 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices. MEI2-like protein 1;(source:Araport11) Ipc11G0012250 AT3G26740.1 CCR-like transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant. CCR-like protein;(source:Araport11) Ipc11G0012240 AT5G13280.1 aspartate kinase 1 Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH). aspartate kinase 1;(source:Araport11) Ipc11G0012230 AT1G28100.6 0 0 hypothetical protein;(source:Araport11) Ipc11G0012220 AT5G03980.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc11G0012210 AT1G56060.2 0 CYSTM3 is a mitochondrial protein that is induced by salt stress and is a negative regulator of salt stress. cysteine-rich/transmembrane domain protein B;(source:Araport11) Ipc11G0012200 #N/A #N/A #N/A #N/A Ipc11G0012190 #N/A #N/A #N/A #N/A Ipc11G0012180 AT5G13190.1 0 Encodes a plasma membrane localized LITAF domain protein that interacts with LSD1 and acts as a negative regulation of hypersensitive cell death. GSH-induced LITAF domain protein;(source:Araport11) Ipc11G0012170 AT2G33490.3 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc11G0012160 AT5G13180.1 NAC domain containing protein 83 Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation. NAC domain containing protein 83;(source:Araport11) Ipc11G0012150 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc11G0012140 AT5G13150.1 exocyst subunit exo70 family protein C1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. This particular member is expressed in pollen and, together with EXO70C2, is involved in pollen tube elongation. Found in the cytoplasm and surprisingly, not found in the plasma membrane. exocyst subunit exo70 family protein C1;(source:Araport11) Ipc11G0012130 AT1G12060.1 BCL-2-associated athanogene 5 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 5;(source:Araport11) Ipc11G0012120 AT2G35450.1 catalytics;hydrolases 0 catalytic/ hydrolase;(source:Araport11) Ipc11G0012110 AT5G13120.1 cyclophilin 20-2 Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone. cyclophilin 20-2;(source:Araport11) Ipc11G0012090 AT3G27010.2 0 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20;(source:Araport11) Ipc11G0012100 AT5G51915.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0012080 AT5G50380.1 exocyst subunit exo70 family protein F1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein F1;(source:Araport11) Ipc11G0012070 AT5G13110.1 glucose-6-phosphate dehydrogenase 2 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. glucose-6-phosphate dehydrogenase 2;(source:Araport11) Ipc11G0012060 AT5G14090.1 0 LAZY1 is required for gravitropic response. Mutants have abnormal shoot angles and abnormal root gravitropism. LZY1 affects the redistribution of auxin in response to gravity in shoots and roots via an unknown mechanism. regulator of nonsense transcript protein;(source:Araport11) Ipc11G0012050 AT1G27980.1 dihydrosphingosine phosphate lyase 0 dihydrosphingosine phosphate lyase;(source:Araport11) Ipc11G0012040 AT5G13080.1 WRKY DNA-binding protein 75 WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation. WRKY DNA-binding protein 75;(source:Araport11) Ipc11G0012030 AT5G50670.2 0 0 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc11G0012020 AT1G24260.1 K-box region and MADS-box transcription factor family protein Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc11G0012010 AT5G65070.1 K-box region and MADS-box transcription factor family protein Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc11G0012000 AT5G43270.3 squamosa promoter binding protein-like 2 member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. squamosa promoter binding protein-like 2;(source:Araport11) Ipc11G0011990 AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc11G0011980 AT1G27950.1 glycosylphosphatidylinositol-anchored lipid protein transfer 1 Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen. The mRNA is cell-to-cell mobile. glycosylphosphatidylinositol-anchored lipid protein transfer 1;(source:Araport11) Ipc11G0011970 AT3G24650.1 AP2/B3-like transcriptional factor family protein Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230). AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc11G0011960 AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger 0 HCP-like superfamily protein with MYND-type zinc finger;(source:Araport11) Ipc11G0011950 AT1G27385.1 0 0 phosphoribosylformylglycinamidine synthase;(source:Araport11) Ipc11G0011940 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc11G0011930 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc11G0011920 AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc11G0011910 AT2G26560.1 phospholipase A 2A Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus. phospholipase A 2A;(source:Araport11) Ipc11G0011900 AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity. Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc11G0011890 AT1G25220.1 anthranilate synthase beta subunit 1 Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2). anthranilate synthase beta subunit 1;(source:Araport11) Ipc11G0011880 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc11G0011870 AT5G47950.1 HXXXD-type acyl-transferase family protein BIA2 is a putative HXXXD-type BAHD acyltransferase. Overexpression results in a BR deficient phenotype and is dependent on a functional HXXXD motif. BIA2 may function in BR homeostasis by regulating the pool of bioactive BR. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc11G0011860 AT2G40000.1 ortholog of sugar beet HS1 PRO-1 2 0 ortholog of sugar beet HS1 PRO-1 2;(source:Araport11) Ipc11G0011850 AT1G72175.1 RING/U-box protein with domain of unknown function (DUF 1232) 0 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232);(source:Araport11) Ipc11G0011840 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0011830 AT4G09140.1 MUTL-homologue 1 Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization. MUTL-homologue 1;(source:Araport11) Ipc11G0011820 AT3G56740.1 Ubiquitin-associated (UBA) protein ATI3A interacting protein containing a large N-terminal rhomboid-like transmembrane domain and a UBA domain at their C terminus, localized in the ER with an important role in plant heat tolerance. UBAC2 proteins may act as both cargo receptors and inducers of an ATI3-mediated selective autophagy pathway, where ATI3 and UBAC2 proteins are delivered to the vacuole under ER stress in an autophagy-dependent manner. Ubiquitin-associated (UBA) protein;(source:Araport11) Ipc11G0011810 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc11G0011800 #N/A #N/A #N/A #N/A Ipc11G0011790 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc11G0011780 AT1G16260.3 0 0 Wall-associated kinase family protein;(source:Araport11) Ipc11G0011770 AT1G22530.2 0 PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells. PATELLIN 2;(source:Araport11) Ipc11G0011760 AT5G16620.1 hydroxyproline-rich glycoprotein family protein chloroplast protein import (Tic40) hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc11G0011750 AT1G71990.1 fucosyltransferase 13 This gene encodes a Lewis-type alpha 1,4-fucosyltransferase fucosyltransferase 13;(source:Araport11) Ipc11G0011740 AT5G66260.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc11G0011730 AT4G09510.1 cytosolic invertase 2 CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues. cytosolic invertase 2;(source:Araport11) Ipc11G0011720 AT2G17350.1 0 0 beta-mannosyltransferase-like protein;(source:Araport11) Ipc11G0011710 AT1G58100.1 TCP family transcription factor Encodes TCP8, belongs to the TCP transcription factor family known to bind site II elements in promoter regions. TCP family transcription factor;(source:Araport11) Ipc11G0011700 AT1G72020.1 0 0 TonB-dependent heme receptor A;(source:Araport11) Ipc11G0011690 AT1G21240.1 wall associated kinase 3 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 3;(source:Araport11) Ipc11G0011680 AT2G24070.3 0 0 QWRF motif protein (DUF566);(source:Araport11) Ipc11G0011670 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0011660 AT1G21240.1 wall associated kinase 3 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 3;(source:Araport11) Ipc11G0011650 AT1G21230.1 wall associated kinase 5 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 5;(source:Araport11) Ipc11G0011640 AT1G21240.1 wall associated kinase 3 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 3;(source:Araport11) Ipc11G0011630 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc11G0011620 AT1G21230.1 wall associated kinase 5 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 5;(source:Araport11) Ipc11G0011610 AT1G21240.1 wall associated kinase 3 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 3;(source:Araport11) Ipc11G0011600 #N/A #N/A #N/A #N/A Ipc11G0011590 AT3G66658.2 aldehyde dehydrogenase 22A1 Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. aldehyde dehydrogenase 22A1;(source:Araport11) Ipc11G0011580 AT5G19485.1 transferases;nucleotidyltransferases 0 transferases/nucleotidyltransferase;(source:Araport11) Ipc11G0011570 #N/A #N/A #N/A #N/A Ipc11G0011560 AT2G36070.1 translocase inner membrane subunit 44-2 One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP. translocase inner membrane subunit 44-2;(source:Araport11) Ipc11G0011550 AT1G35470.2 SPla/RYanodine receptor (SPRY) domain-containing protein Encodes a homologue of human RanBPM that belongs to the uncharacterized family of plant SPRY, LisH, CTLH and CRA domain-containing proteins. SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11) Ipc11G0011540 AT1G58110.2 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc11G0011530 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc11G0011520 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc11G0011510 AT4G23410.1 tetraspanin5 TET5 encodes a member of the TETRASPANIN gene family that is expressed in the embryo and vascular system and is involved in organ growth redundantly with TET6. tetraspanin5;(source:Araport11) Ipc11G0011500 AT2G01060.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc11G0011490 AT1G72090.1 Methylthiotransferase 0 Methylthiotransferase;(source:Araport11) Ipc11G0011480 AT4G25950.1 vacuolar ATP synthase G3 V-ATPase G-subunit like protein vacuolar ATP synthase G3;(source:Araport11) Ipc11G0011470 AT1G72100.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 0 late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11) Ipc11G0011460 AT1G71980.1 Protease-associated (PA) RING/U-box zinc finger family protein RMR2 is a secretory pathway protein localized to the trans-golgi network. It belongs to a family of vacuolar sorting receptors. If forms heterodimers with RMR1. Protease-associated (PA) RING/U-box zinc finger family protein;(source:Araport11) Ipc11G0011450 AT4G22760.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0011440 AT4G09980.1 Methyltransferase MT-A70 family protein Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. Methyltransferase MT-A70 family protein;(source:Araport11) Ipc11G0011430 AT1G77590.1 long chain acyl-CoA synthetase 9 Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids. long chain acyl-CoA synthetase 9;(source:Araport11) Ipc11G0011420 AT1G35670.1 calcium-dependent protein kinase 2 Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 2;(source:Araport11) Ipc11G0011410 AT1G35680.1 Ribosomal protein L21 Encodes a chloroplast ribosomal protein L21 that is required for chloroplast development and embryogenesis. The mRNA is cell-to-cell mobile. Ribosomal protein L21;(source:Araport11) Ipc11G0011400 AT4G09580.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc11G0011390 AT1G71930.2 0 Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. vascular related NAC-domain protein 7;(source:Araport11) Ipc11G0011380 AT1G22690.3 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc11G0011370 AT4G09600.1 GAST1 protein homolog 3 One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato. GAST1 protein homolog 3;(source:Araport11) Ipc11G0011360 AT1G34550.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc11G0011350 AT1G34550.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc11G0011340 AT1G77855.1 0 0 BPS1-like protein;(source:Araport11) Ipc11G0011330 AT1G71910.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0011320 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0011310 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0011300 AT2G21100.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc11G0011290 AT3G26660.1 LOB domain-containing protein 24 0 LOB domain-containing protein 24;(source:Araport11) Ipc11G0011280 AT1G34430.1 2-oxoacid dehydrogenases acyltransferase family protein 0 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) Ipc11G0011270 AT5G44200.2 CAP-binding protein 20 Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing. CAP-binding protein 20;(source:Araport11) Ipc11G0011260 AT1G02140.1 mago nashi family protein Encodes a homologue of the exon junction complex (EJC) component MAGO that participates in intron-mediated enhancement of gene expression. mago nashi family protein;(source:Araport11) Ipc11G0011250 AT4G25130.1 peptide met sulfoxide reductase 4 Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress. peptide met sulfoxide reductase 4;(source:Araport11) Ipc11G0011240 AT4G17680.1 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc11G0011230 AT5G51100.1 Fe superoxide dismutase 2 Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B. Fe superoxide dismutase 2;(source:Araport11) Ipc11G0011220 AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit Encodes the mitochondrial ATP synthase subunit delta. ATPase, F1 complex, delta/epsilon subunit;(source:Araport11) Ipc11G0011210 AT1G02060.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0011190 AT4G33270.1 Transducin family protein / WD-40 repeat family protein Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0011200 AT1G64640.1 early nodulin-like protein 8 0 early nodulin-like protein 8;(source:Araport11) Ipc11G0011180 AT1G17360.1 0 0 LOW protein: protein phosphatase 1 regulatory subunit-like protein;(source:Araport11) Ipc11G0011170 AT3G54190.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0011160 AT2G40810.2 homolog of yeast autophagy 18C 0 yeast autophagy-like protein;(source:Araport11) Ipc11G0011150 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0011140 AT3G08710.3 0 Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication. thioredoxin H-type 9;(source:Araport11) Ipc11G0011130 AT3G08720.4 0 Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. serine/threonine protein kinase 2;(source:Araport11) Ipc11G0011120 AT3G58520.2 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc11G0011110 AT5G61430.1 NAC domain containing protein 100 0 NAC domain containing protein 100;(source:Araport11) Ipc11G0011100 AT5G64813.3 0 The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.The mRNA is cell-to-cell mobile. Ras-related small GTP-binding family protein;(source:Araport11) Ipc11G0011090 AT4G24020.1 NIN like protein 7 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor. The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc11G0011080 AT5G07680.1 NAC domain containing protein 80 0 NAC domain containing protein 80;(source:Araport11) Ipc11G0011070 AT4G24020.1 NIN like protein 7 Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor. The mRNA is cell-to-cell mobile. NIN like protein 7;(source:Araport11) Ipc11G0011060 #N/A #N/A #N/A #N/A Ipc11G0011050 #N/A #N/A #N/A #N/A Ipc11G0010940 AT3G10870.1 methyl esterase 17 Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem. methyl esterase 17;(source:Araport11) Ipc11G0011040 AT3G56370.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0011030 AT3G56380.1 response regulator 17 response regulator 17 response regulator 17;(source:Araport11) Ipc11G0011020 AT3G56380.1 response regulator 17 response regulator 17 response regulator 17;(source:Araport11) Ipc11G0011010 AT2G40690.3 0 Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway. NAD-dependent glycerol-3-phosphate dehydrogenase family protein;(source:Araport11) Ipc11G0011000 AT2G40730.1 Protein kinase family protein with ARM repeat domain 0 kinase family with ARM repeat domain-containing protein;(source:Araport11) Ipc11G0010990 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc11G0010980 AT2G40740.1 WRKY DNA-binding protein 55 member of WRKY Transcription Factor; Group III WRKY DNA-binding protein 55;(source:Araport11) Ipc11G0010970 AT2G38560.1 transcript elongation factor IIS Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy. transcript elongation factor IIS;(source:Araport11) Ipc11G0010960 AT5G05190.1 Protein of unknown function (DUF3133) 0 hypothetical protein (DUF3133);(source:Araport11) Ipc11G0010950 AT3G10870.1 methyl esterase 17 Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem. methyl esterase 17;(source:Araport11) Ipc11G0010930 AT2G36500.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11) Ipc11G0010920 AT5G05240.2 0 0 cation-transporting ATPase;(source:Araport11) Ipc11G0010900 AT3G56360.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0010910 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc11G0010890 AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc11G0010880 AT2G40610.1 expansin A8 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A8;(source:Araport11) Ipc11G0010870 AT2G40610.1 expansin A8 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A8;(source:Araport11) Ipc11G0010860 AT3G10915.2 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc11G0010850 AT1G06890.2 nodulin MtN21 /EamA-like transporter family protein UXT3 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0010840 AT5G05300.1 0 IDL6 peptide is induced in response to Pathogen-Associated Molecular Patterns (PAMPs). Overexpression of IDL6 results in increased susceptibility to pathogens. hypothetical protein;(source:Araport11) Ipc11G0010830 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc11G0010820 AT3G05660.1 receptor like protein 33 0 receptor like protein 33;(source:Araport11) Ipc11G0010810 AT3G11010.1 receptor like protein 34 0 receptor like protein 34;(source:Araport11) Ipc11G0010800 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc11G0010790 AT3G11010.5 0 0 receptor like protein 34;(source:Araport11) Ipc11G0010780 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc11G0010770 AT3G11010.5 0 0 receptor like protein 34;(source:Araport11) Ipc11G0010760 AT2G40540.5 0 putative potassium transporter AtKT2p (AtKT2) mRNA, potassium transporter 2;(source:Araport11) Ipc11G0010750 AT3G56290.1 0 0 potassium transporter;(source:Araport11) Ipc11G0010730 AT3G26480.2 0 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0010740 AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein Regulates DNA replication via interaction with BICE1 and MCM7. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc11G0010720 AT2G40480.1 Plant protein of unknown function (DUF827) 0 WEB family protein (DUF827);(source:Araport11) Ipc11G0010710 AT5G01790.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0010700 AT2G40340.3 0 Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc11G0010690 AT5G05390.1 laccase 12 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 12;(source:Araport11) Ipc11G0010680 AT1G05160.2 0 Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family. cytochrome P450, family 88, subfamily A, polypeptide 3;(source:Araport11) Ipc11G0010670 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0010660 AT5G05390.1 laccase 12 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 12;(source:Araport11) Ipc11G0010650 AT3G56100.1 meristematic receptor-like kinase Protein kinase expressed in meristematic cells. Phosphorylates AGL24. meristematic receptor-like kinase;(source:Araport11) Ipc11G0010630 AT2G38360.1 prenylated RAB acceptor 1.B4 0 prenylated RAB acceptor 1.B4;(source:Araport11) Ipc11G0010640 AT3G20720.1 0 0 amino-terminal region of chorein;(source:Araport11) Ipc11G0010620 AT3G56130.1 biotin/lipoyl attachment domain-containing protein 0 biotin/lipoyl attachment domain-containing protein;(source:Araport11) Ipc11G0010610 #N/A #N/A #N/A #N/A Ipc11G0010600 AT5G01660.2 0 0 influenza virus NS1A-binding protein;(source:Araport11) Ipc11G0010590 AT3G56140.3 0 0 DUF399 family protein, putative (DUF399 and DUF3411);(source:Araport11) Ipc11G0010580 AT5G34930.3 0 0 arogenate dehydrogenase;(source:Araport11) Ipc11G0010570 AT2G40410.2 Staphylococcal nuclease homologue Encodes a Ca(2+)-dependent nuclease that can degrade both DNA and RNA. Ca(2+)-dependent nuclease family protein;(source:Araport11) Ipc11G0010560 AT5G05360.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0010550 AT3G10980.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc11G0010540 AT3G56200.1 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc11G0010530 AT3G56200.1 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc11G0010520 AT3G56180.2 0 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc11G0010510 AT2G20060.1 Ribosomal protein L4/L1 family 0 Ribosomal protein L4/L1 family;(source:Araport11) Ipc11G0010500 AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Chemical evidence for function comes from xylan NMR analysis. Secondary wall thickening phenotype can be only observed in double or triple mutant with esk1. TRICHOME BIREFRINGENCE-LIKE 33;(source:Araport11) Ipc11G0010490 AT2G40320.1 TRICHOME BIREFRINGENCE-LIKE 33 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Chemical evidence for function comes from xylan NMR analysis. Secondary wall thickening phenotype can be only observed in double or triple mutant with esk1. TRICHOME BIREFRINGENCE-LIKE 33;(source:Araport11) Ipc11G0010480 AT5G05450.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc11G0010470 AT1G09870.1 histidine acid phosphatase family protein 0 histidine acid phosphatase family protein;(source:Araport11) Ipc11G0010460 AT4G19180.3 0 Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence. GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11) Ipc11G0010450 AT5G50423.1 Putative membrane lipoprotein Encodes a defensin-like (DEFL) family protein. Putative membrane lipoprotein;(source:Araport11) Ipc11G0010440 AT1G22730.1 MA3 domain-containing protein 0 MA3 domain-containing protein;(source:Araport11) Ipc11G0010430 AT2G40290.1 Eukaryotic translation initiation factor 2 subunit 1 Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. Eukaryotic translation initiation factor 2 subunit 1;(source:Araport11) Ipc11G0010420 AT3G56080.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0010410 AT2G41450.2 N-acetyltransferases;N-acetyltransferases 0 N-acetyltransferase;(source:Araport11) Ipc11G0010400 AT1G71840.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0010390 AT2G40270.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc11G0010370 AT5G05510.1 Mad3/BUB1 homology region 1 0 Mad3/BUB1 homology region 1;(source:Araport11) Ipc11G0010380 AT5G05500.1 Pollen Ole e 1 allergen and extensin family protein Encodes Proline-rich protein-like PRPL1, controls elongation of root hairs. Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc11G0010360 AT5G05520.1 Outer membrane OMP85 family protein 0 Outer membrane OMP85 family protein;(source:Araport11) Ipc11G0010350 AT2G40260.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc11G0010340 AT2G40240.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0010330 AT3G08530.1 Clathrin, heavy chain CHC2 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis Mutants have increased drought tolerance due to defects in stomatal movement. Clathrin, heavy chain;(source:Araport11) Ipc11G0010320 AT2G40180.1 phosphatase 2C5 Encodes PP2C5, a member of the PP2C family phosphatases. PP2C5 acts as a MAPK phosphatase that positively regulates seed germination, stomatal closure and ABA-inducible gene expression. phosphatase 2C5;(source:Araport11) Ipc11G0010310 AT2G40170.1 Stress induced protein Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of desiccation tolerance and rate of water loss during seed maturation. Stress induced protein;(source:Araport11) Ipc11G0010300 AT3G59160.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc11G0010290 AT5G02700.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc11G0010280 AT3G11430.1 glycerol-3-phosphate acyltransferase 5 sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester. glycerol-3-phosphate acyltransferase 5;(source:Araport11) Ipc11G0010270 AT5G05610.2 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 1;(source:Araport11) Ipc11G0010260 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0010250 AT3G55960.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc11G0010240 AT3G11210.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc11G0010230 AT2G40090.1 ABC2 homolog 9 member of ATH subfamily ABC2 homolog 9;(source:Araport11) Ipc11G0010220 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010210 AT2G40060.1 Clathrin light chain protein Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. The mRNA is cell-to-cell mobile. Clathrin light chain protein;(source:Araport11) Ipc11G0010200 AT2G40070.1 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc11G0010190 AT2G40110.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc11G0010180 AT3G17100.2 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc11G0010170 AT2G40095.2 0 0 Alpha/beta hydrolase related protein;(source:Araport11) Ipc11G0010160 AT5G05760.1 syntaxin of plants 31 A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis syntaxin of plants 31;(source:Araport11) Ipc11G0010150 AT2G40010.1 Ribosomal protein L10 family protein 0 Ribosomal protein L10 family protein;(source:Araport11) Ipc11G0010140 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010130 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010120 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010110 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010100 AT5G39390.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc11G0010090 AT1G07310.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc11G0010080 AT1G07310.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc11G0010070 AT2G39960.1 Microsomal signal peptidase 25 kDa subunit (SPC25) 0 Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11) Ipc11G0010060 #N/A #N/A #N/A #N/A Ipc11G0010050 AT2G40730.1 Protein kinase family protein with ARM repeat domain 0 kinase family with ARM repeat domain-containing protein;(source:Araport11) Ipc11G0010040 AT2G39960.1 Microsomal signal peptidase 25 kDa subunit (SPC25) 0 Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11) Ipc11G0010030 AT2G39960.1 Microsomal signal peptidase 25 kDa subunit (SPC25) 0 Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11) Ipc11G0010020 AT2G39940.1 RNI-like superfamily protein Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants. RNI-like superfamily protein;(source:Araport11) Ipc11G0010010 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc11G0010000 AT3G55800.1 sedoheptulose-bisphosphatase Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. The mRNA is cell-to-cell mobile. sedoheptulose-bisphosphatase;(source:Araport11) Ipc11G0009990 AT3G55780.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc11G0009980 AT1G74270.1 Ribosomal protein L35Ae family protein 0 Ribosomal protein L35Ae family protein;(source:Araport11) Ipc11G0009970 AT2G37980.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0009960 AT1G51740.1 syntaxin of plants 81 member of SYP8 Gene Family syntaxin of plants 81;(source:Araport11) Ipc11G0009950 AT2G39890.2 proline transporter 1 Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem. proline transporter 1;(source:Araport11) Ipc11G0009940 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc11G0009930 AT5G05840.1 Protein of unknown function (DUF620) 0 replication factor C subunit, putative (DUF620);(source:Araport11) Ipc11G0009920 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc11G0009910 AT1G78270.1 UDP-glucosyl transferase 85A4 0 UDP-glucosyl transferase 85A4;(source:Araport11) Ipc11G0009900 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc11G0009890 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc11G0009880 AT2G27450.1 nitrilase-like protein 1 Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis. nitrilase-like protein 1;(source:Araport11) Ipc11G0009870 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc11G0009860 AT2G39870.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0009850 AT5G05940.1 ROP guanine nucleotide exchange factor 5 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. ROP guanine nucleotide exchange factor 5;(source:Araport11) Ipc11G0009840 AT2G39855.4 0 0 plant/protein;(source:Araport11) Ipc11G0009830 AT2G39840.1 type one serine/threonine protein phosphatase 4 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. The mRNA is cell-to-cell mobile. type one serine/threonine protein phosphatase 4;(source:Araport11) Ipc11G0009820 AT2G39805.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc11G0009810 #N/A #N/A #N/A #N/A Ipc11G0009800 AT2G39770.3 0 Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc11G0009790 AT2G39770.3 0 Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc11G0009780 AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein TCF1 encodes a member of the RCC1 gene family and is required for chromatin based gene regulation of cold responsive genes in a CBF-independent manner. It is expressed in response to cold but not ABA. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc11G0009770 AT2G39760.1 BTB/POZ/MATH-domains containing protein Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB/POZ/MATH-domains containing protein;(source:Araport11) Ipc11G0009760 AT2G39740.3 0 Encodes HESO1 (HEN1 suppressor 1), a terminal nucleotidyl transferase that uridylates miRNAs and siRNAs at 3′ end. HESO1-mediated 3′ uridylation destabilizes small RNAs in hen1. Nucleotidyltransferase family protein;(source:Araport11) Ipc11G0009750 AT1G07430.1 highly ABA-induced PP2C gene 2 Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy. highly ABA-induced PP2C protein 2;(source:Araport11) Ipc11G0009740 AT1G74260.1 purine biosynthesis 4 Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development. purine biosynthesis 4;(source:Araport11) Ipc11G0009730 AT5G06080.1 LOB domain-containing protein 33 0 LOB domain-containing protein 33;(source:Araport11) Ipc11G0009720 AT3G55550.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc11G0009710 AT4G15020.2 hAT transposon superfamily 0 hAT transposon superfamily;(source:Araport11) Ipc11G0009700 AT2G29190.2 pumilio 2 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 2;(source:Araport11) Ipc11G0009690 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc11G0009680 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc11G0009670 AT3G11430.1 glycerol-3-phosphate acyltransferase 5 sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester. glycerol-3-phosphate acyltransferase 5;(source:Araport11) Ipc11G0009660 AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc11G0009650 AT1G20150.1 Subtilisin-like serine endopeptidase family protein 0 Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc11G0009640 AT5G13830.1 FtsJ-like methyltransferase family protein 0 FtsJ-like methyltransferase family protein;(source:Araport11) Ipc11G0009630 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc11G0009620 AT5G13820.2 0 Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding (SANT) domain in C-terminus that prefers the sequence TTTAGGG. Single Myb Histone (SMH) gene family member. telomeric DNA binding protein 1;(source:Araport11) Ipc11G0009610 AT3G48670.3 0 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. XH/XS domain-containing protein;(source:Araport11) Ipc11G0009600 AT3G12530.3 0 0 PSF2;(source:Araport11) Ipc11G0009590 AT2G39650.1 Protein of unknown function (DUF506) 0 cruciferin (DUF506);(source:Araport11) Ipc11G0009580 AT3G55430.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc11G0009570 AT3G55420.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0009560 AT5G45420.3 0 The gene encodes a MYB transcription factor belons to R2R3-MYB family of transcription factors. Knock-down mutant analysis indicates its role in root hair elongation. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc11G0009550 AT1G28630.4 0 0 transcriptional regulator EFH1-like protein;(source:Araport11) Ipc11G0009540 AT2G30050.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc11G0009530 AT3G12110.1 actin-11 Encodes an actin that is expressed predominantly during reproductive development. actin-11;(source:Araport11) Ipc11G0009520 AT3G12580.1 heat shock protein 70 0 heat shock protein 70;(source:Araport11) Ipc11G0009510 AT3G04020.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0009500 AT5G16010.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein 0 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) Ipc11G0009490 AT3G12570.4 FYD 0 FYD;(source:Araport11) Ipc11G0009480 AT3G12580.1 heat shock protein 70 0 heat shock protein 70;(source:Araport11) Ipc11G0009470 AT5G59300.1 ubiquitin carrier protein 7 ubiquitin conjugating enzyme E2 ubiquitin-conjugating enzyme E2;(source:Araport11) Ipc11G0009460 AT2G28760.4 0 0 UDP-XYL synthase 6;(source:Araport11) Ipc11G0009450 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc11G0009440 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc11G0009410 AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1 encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation delta(3), delta(2)-enoyl CoA isomerase 1;(source:Araport11) Ipc11G0009430 AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1 encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation delta(3), delta(2)-enoyl CoA isomerase 1;(source:Araport11) Ipc11G0009420 AT4G19670.7 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0009400 AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1 encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation delta(3), delta(2)-enoyl CoA isomerase 1;(source:Araport11) Ipc11G0009390 AT2G39580.2 0 0 zinc finger C3H1 domain protein;(source:Araport11) Ipc11G0009380 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0009370 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0009360 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc11G0009350 AT5G59850.1 Ribosomal protein S8 family protein 0 Ribosomal protein S8 family protein;(source:Araport11) Ipc11G0009340 AT1G01950.3 armadillo repeat kinesin 2 Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules. armadillo repeat kinesin 2;(source:Araport11) Ipc11G0009330 AT5G40830.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0009320 #N/A #N/A #N/A #N/A Ipc11G0009310 AT1G53025.1 Ubiquitin-conjugating enzyme family protein 0 Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc11G0009300 AT3G55410.2 0 0 2-oxoglutarate dehydrogenase, E1 component;(source:Araport11) Ipc11G0009290 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc08G0005630 AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc08G0005640 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005650 AT2G35640.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc08G0005660 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005670 AT5G27260.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc08G0005680 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005690 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc08G0005700 AT4G19640.1 Ras-related small GTP-binding family protein Encodes Ara7. Ras-related small GTP-binding family protein;(source:Araport11) Ipc08G0005710 AT4G19650.2 0 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc08G0005720 AT5G45110.1 NPR1-like protein 3 Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid. The mRNA is cell-to-cell mobile. NPR1-like protein 3;(source:Araport11) Ipc08G0005730 AT2G45040.1 Matrixin family protein 0 Matrixin family protein;(source:Araport11) Ipc08G0005740 AT5G43630.4 0 Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.The mRNA is cell-to-cell mobile. Gene ontology analysis of common promoter targets suggests an active role in the transcriptional regulation of gene expression in response to environmental, biotic, abiotic, and endogenous stimuli. Promoter regions show a huge over-representation in proteins involved in transcription, clock, flowering, and light signaling components, reflecting its involvement in regulating gene expression in response to environmental stimuli such as light and temperature. Coassociates with and regulates the expression of light-regulated loci as well as transcriptional regulators to shape plant development in response to environmental stimuli. Requires, at least in part, ZFHD10 for function with regard to blue-light-regulated hypocotyl elongation. zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005750 AT1G23350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc08G0005760 AT4G03550.1 glucan synthase-like 5 Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense. The mRNA is cell-to-cell mobile. glucan synthase-like 5;(source:Araport11) Ipc08G0005770 AT3G12520.2 sulfate transporter 4;2 Encodes a sulfate transporter that in induced under sulfate limitation. sulfate transporter 4;(source:Araport11) Ipc08G0005780 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc08G0005790 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc08G0005800 AT1G31280.1 Argonaute family protein Encodes Argonaute gene that binds viral siRNAs and is involved in antiviral defense response. Regulates innate immunity.Mutants have increased susceptibility to Potato virus X and tobacco rattle virus. Argonaute family protein;(source:Araport11) Ipc08G0005810 AT5G06100.5 0 Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. myb domain protein 33;(source:Araport11) Ipc08G0005820 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005830 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc08G0005840 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc08G0005850 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005870 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005880 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0005890 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc08G0005900 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0005910 AT3G57780.4 0 0 nucleolar-like protein;(source:Araport11) Ipc08G0005920 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc08G0005930 AT3G12920.1 SBP (S-ribonuclease binding protein) family protein Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea. SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc08G0005940 AT1G16770.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0005950 AT4G32375.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0005960 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0021420 AT5G56250.2 hapless 8 0 hapless 8;(source:Araport11) Ipc02G0021430 AT5G56220.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0021440 AT5G56210.1 WPP domain interacting protein 2 Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells. WPP domain interacting protein 2;(source:Araport11) Ipc02G0021450 AT2G26940.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc02G0021460 AT3G13340.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0021470 AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 0 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1;(source:Araport11) Ipc02G0021480 AT1G55690.5 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc02G0021490 AT5G41700.5 ubiquitin conjugating enzyme 8 One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 The mRNA is cell-to-cell mobile. ubiquitin conjugating enzyme 8;(source:Araport11) Ipc02G0021500 AT4G26470.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0021510 AT5G56140.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc02G0021520 AT5G56110.1 myb domain protein 103 Encodes a member of the R2R3 MYB transcription factor gene family that is required for anther development by regulation tapetum development, callose dissolution and exine formation. It acts upstream of MS2. myb domain protein 103;(source:Araport11) Ipc02G0021530 AT5G23810.1 amino acid permease 7 Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. amino acid permease 7;(source:Araport11) Ipc02G0021540 AT2G41490.1 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase UDP-glcnac-adolichol phosphate glcnac-1-p-transferase;(source:Araport11) Ipc02G0021560 AT2G42130.4 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc02G0021550 AT1G55740.1 seed imbibition 1 0 seed imbibition 1;(source:Araport11) Ipc02G0021570 AT3G13310.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0021580 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc02G0021590 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc02G0021600 AT4G26530.3 0 0 Aldolase superfamily protein;(source:Araport11) Ipc02G0021610 AT4G26510.4 0 One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively. uridine kinase-like 4;(source:Araport11) Ipc02G0021620 AT4G12690.2 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc02G0021630 AT4G26550.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc02G0021640 AT5G56000.1 HEAT SHOCK PROTEIN 81.4 0 HEAT SHOCK PROTEIN 81.4;(source:Araport11) Ipc02G0021650 AT1G28580.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0021660 AT5G55960.1 0 0 transmembrane protein C9orf5 protein;(source:Araport11) Ipc02G0021670 AT1G55830.3 0 0 coiled-coil protein;(source:Araport11) Ipc02G0021680 AT5G55950.1 Nucleotide/sugar transporter family protein 0 Nucleotide/sugar transporter family protein;(source:Araport11) Ipc02G0021690 AT5G04760.1 Duplicated homeodomain-like superfamily protein R-R-type MYB protein which plays negative roles in salt stress and is required for ABA signaling in Arabidopsis. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc02G0021700 AT5G47750.1 D6 protein kinase like 2 D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism. D6 protein kinase like 2;(source:Araport11) Ipc02G0021710 AT1G77720.1 putative protein kinase 1 Encodes a predicted protein kinase based on sequence similarity. putative protein kinase 1;(source:Araport11) Ipc02G0021720 AT4G26620.1 Sucrase/ferredoxin-like family protein 0 Sucrase/ferredoxin-like family protein;(source:Araport11) Ipc02G0021730 AT5G55860.1 Plant protein of unknown function (DUF827) WEB1/PMI2 related protein involved in mecahnotransduction.TREPH1 is phosphorylated at position S625 in response to touch, and this is required for mechanosensitive growth response. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc02G0021740 AT3G07680.1 emp24/gp25L/p24 family/GOLD family protein Encodes an Golgi-localized p24 protein. Interacts with p24delta5 at ER export sites for ER exit and coupled transport to the Golgi apparatus. The mRNA is cell-to-cell mobile. emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc02G0021750 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc02G0021760 AT5G55840.2 0 0 PPR superfamily protein;(source:Araport11) Ipc02G0021770 AT5G55830.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0021780 AT4G25434.10 0 0 nudix hydrolase homolog 10;(source:Araport11) Ipc02G0021790 AT5G55730.2 FASCICLIN-like arabinogalactan 1 Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration. FASCICLIN-like arabinogalactan 1;(source:Araport11) Ipc02G0021800 AT5G55710.1 0 Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V). TIC 20-v-like protein;(source:Araport11) Ipc02G0021810 AT4G39500.1 cytochrome P450, family 96, subfamily A, polypeptide 11 0 cytochrome P450, family 96, subfamily A, polypeptide 11;(source:Araport11) Ipc02G0021820 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc02G0021830 AT3G13175.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0021840 AT4G32170.1 cytochrome P450, family 96, subfamily A, polypeptide 2 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 2;(source:Araport11) Ipc02G0021850 AT4G32170.1 cytochrome P450, family 96, subfamily A, polypeptide 2 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 2;(source:Araport11) Ipc02G0021860 AT4G39480.1 cytochrome P450, family 96, subfamily A, polypeptide 9 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 9;(source:Araport11) Ipc02G0021870 AT3G13130.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0021880 AT1G55900.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein component of a translocase in the mitochondrial inner membrane Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc02G0021890 AT3G20180.2 0 0 Copper transport protein family;(source:Araport11) Ipc02G0021900 AT5G55560.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0021910 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0021920 AT5G55530.3 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0021930 AT3G20150.1 Kinesin motor family protein 0 Kinesin motor family protein;(source:Araport11) Ipc02G0021940 AT4G26670.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc02G0021950 AT5G47540.1 Mo25 family protein 0 Mo25 family protein;(source:Araport11) Ipc02G0021960 AT5G55500.1 beta-1,2-xylosyltransferase Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions. The mRNA is cell-to-cell mobile. beta-1,2-xylosyltransferase;(source:Araport11) Ipc02G0021970 AT5G55480.1 SHV3-like 1 Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. The mRNA is cell-to-cell mobile. SHV3-like 1;(source:Araport11) Ipc02G0021980 AT5G55410.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0021990 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc02G0022000 AT4G26700.4 0 Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. fimbrin 1;(source:Araport11) Ipc02G0022010 AT5G55390.3 0 Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. ENHANCED DOWNY MILDEW 2;(source:Araport11) Ipc02G0022020 AT5G55290.3 0 0 ATPase, V0 complex, subunit E;(source:Araport11) Ipc02G0022030 AT5G55280.1 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1;(source:Araport11) Ipc02G0022040 AT1G04970.1 lipid-binding serum glycoprotein family protein Encodes one of the two LBP/BPI related proteins (AT1G04970/LBR-1, AT3G20270/LBR-2) that bind to LPS directly and regulate PR1 expression. lipid-binding serum glycoprotein family protein;(source:Araport11) Ipc02G0022050 AT5G55230.3 0 Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution. microtubule-associated proteins 65-1;(source:Araport11) Ipc02G0022060 AT4G37200.1 Thioredoxin superfamily protein Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen. Thioredoxin superfamily protein;(source:Araport11) Ipc02G0022070 AT4G26810.2 SWIB/MDM2 domain superfamily protein 0 SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc02G0022080 AT3G20290.3 0 Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520). EPS15 homology domain 1;(source:Araport11) Ipc02G0022090 AT3G20300.1 Protein of unknown function (DUF3537) 0 extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11) Ipc02G0022100 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc02G0022110 AT4G26840.1 small ubiquitin-like modifier 1 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. small ubiquitin-like modifier 1;(source:Araport11) Ipc02G0022120 AT5G55135.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0022130 AT3G21610.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc02G0022140 AT3G20800.1 Cell differentiation, Rcd1-like protein 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc02G0022150 AT3G20440.2 Alpha amylase family protein Encodes BE1, a putative glycoside hydrolase. Involved in organogenesis and somatic embryogenesis by regulating carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development. Alpha amylase family protein;(source:Araport11) Ipc02G0022160 AT1G50720.1 Stigma-specific Stig1 family protein 0 Stigma-specific Stig1 family protein;(source:Araport11) Ipc02G0022170 AT5G55100.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 0 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein;(source:Araport11) Ipc02G0022180 AT4G04450.1 WRKY family transcription factor member of WRKY Transcription Factor; Group II-b WRKY family transcription factor;(source:Araport11) Ipc02G0022190 AT4G26890.1 mitogen-activated protein kinase kinase kinase 16 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 16;(source:Araport11) Ipc02G0022200 AT5G42570.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc02G0022210 AT4G26900.1 HIS HF encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway HIS HF;(source:Araport11) Ipc02G0022220 AT4G17300.2 0 Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11) Ipc02G0022230 AT5G55050.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0022240 AT3G20480.1 tetraacyldisaccharide 4'-kinase family protein 0 tetraacyldisaccharide 4-kinase family protein;(source:Araport11) Ipc02G0022250 AT5G55040.2 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc02G0022260 AT5G54980.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc02G0022270 AT4G21970.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc02G0022280 AT2G05710.1 aconitase 3 Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. aconitase 3;(source:Araport11) Ipc02G0022290 AT4G26980.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc02G0022300 AT1G50700.1 calcium-dependent protein kinase 33 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 33;(source:Araport11) Ipc02G0022310 AT4G35840.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0022320 AT3G20390.1 endoribonuclease L-PSP family protein Encodes a plastidial RidA (Reactive Intermediate Deaminase A) homolog that hydrolyzes the enamines/imines formed by Thr dehydratase from Ser or Thr. RidA accelerates the deamination of reactive enamine/imine intermediates produced by threonine dehydratase (At3g10050) with threonine or serine as substrates. In the absence of RidA, the serine-derived imine inactivates BCAT3 (At3g49680). RidA thus pre-empts damage to BCAT3 by hydrolyzing the reactive imine before it does damage. endoribonuclease L-PSP family protein;(source:Araport11) Ipc02G0022330 AT5G54740.1 seed storage albumin 5 0 seed storage albumin 5;(source:Araport11) Ipc02G0022340 AT1G50670.3 0 0 OTU-like cysteine protease family protein;(source:Araport11) Ipc02G0022350 AT1G50660.1 0 0 actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11) Ipc02G0022360 AT3G20340.1 0 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. protein expression protein;(source:Araport11) Ipc02G0022370 AT5G54930.2 AT hook motif-containing protein 0 AT hook motif-containing protein;(source:Araport11) Ipc02G0022380 AT4G26990.1 0 0 polyadenylate-binding protein interacting protein;(source:Araport11) Ipc02G0022390 AT5G54900.1 RNA-binding protein 45A 0 RNA-binding protein 45A;(source:Araport11) Ipc02G0022400 AT5G54880.1 DTW domain-containing protein 0 DTW domain-containing protein;(source:Araport11) Ipc02G0022410 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc02G0022420 AT5G54860.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0022430 AT1G50830.1 Aminotransferase-like, plant mobile domain family protein 0 Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc02G0022440 AT3G20530.1 Protein kinase superfamily protein Protein kinase superfamily protein, expressed in the peroxisome. Protein kinase superfamily protein;(source:Araport11) Ipc02G0022450 AT4G27070.1 tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. The mRNA is cell-to-cell mobile. tryptophan synthase beta-subunit 2;(source:Araport11) Ipc02G0022460 AT5G54790.1 0 0 CTD small phosphatase-like protein;(source:Araport11) Ipc02G0022470 AT1G50940.1 electron transfer flavoprotein alpha Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness. electron transfer flavoprotein alpha;(source:Araport11) Ipc02G0022480 AT3G20560.1 PDI-like 5-3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). PDI-like 5-3;(source:Araport11) Ipc02G0022490 AT3G20570.1 early nodulin-like protein 9 0 early nodulin-like protein 9;(source:Araport11) Ipc02G0022500 AT3G20580.1 COBRA-like protein 10 precursor 0 COBRA-like protein 10 precursor;(source:Araport11) Ipc02G0022510 AT4G27120.2 0 0 DDRGK domain protein;(source:Araport11) Ipc02G0022520 AT1G11580.1 methylesterase PCR A 0 methylesterase PCR A;(source:Araport11) Ipc02G0022530 AT4G05320.8 0 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc02G0022540 AT3G20620.1 F-box family protein-related 0 F-box family protein-like protein;(source:Araport11) Ipc02G0022550 #N/A #N/A #N/A #N/A Ipc02G0022560 AT3G20740.1 Transducin/WD40 repeat-like superfamily protein Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0022570 AT5G54680.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0022580 AT5G54670.2 0 Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. kinesin 3;(source:Araport11) Ipc02G0022590 AT5G54650.2 formin homology5 Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene. formin homology5;(source:Araport11) Ipc02G0022600 AT1G51060.1 histone H2A 10 Encodes HTA10, a histone H2A protein. The mRNA is cell-to-cell mobile. histone H2A 10;(source:Araport11) Ipc02G0022610 AT4G30960.1 SOS3-interacting protein 3 Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile. SOS3-interacting protein 3;(source:Araport11) Ipc02G0022620 AT5G54600.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc02G0022630 AT5G54590.4 0 Splice variant At5g54590.2 encodes CRLK1 (440-amino acid in length) calcium/calmodulin-regulated receptor-like kinase crucial for cold tolerance. CRLK1 is Primarily localized in the plasma membrane. Protein kinase superfamily protein;(source:Araport11) Ipc02G0022640 AT3G62460.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc02G0022650 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc02G0022660 AT3G20660.1 organic cation/carnitine transporter4 0 organic cation/carnitine transporter4;(source:Araport11) Ipc02G0022670 AT5G54580.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes an RNA recognition motif (RRM) and is involved in C-> U RNA editing in mitochondria. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0022680 AT5G54540.1 Uncharacterised conserved protein (UCP012943) 0 Uncharacterized conserved protein (UCP012943);(source:Araport11) Ipc02G0022690 AT5G54530.1 Protein of unknown function, DUF538 0 serine protease, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc02G0022700 AT2G16790.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0022710 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0022720 AT1G11360.4 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc02G0022730 AT2G20080.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0022740 AT4G27340.1 Met-10+ like family protein 0 Met-10+ like family protein;(source:Araport11) Ipc02G0022750 AT4G33560.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc02G0022760 AT4G21450.1 PapD-like superfamily protein 0 PapD-like superfamily protein;(source:Araport11) Ipc02G0022770 AT5G54240.1 Protein of unknown function (DUF1223) 0 membrane lipoprotein lipid attachment site-like protein, putative (DUF1223);(source:Araport11) Ipc02G0022780 AT4G27360.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc02G0022790 AT5G54250.4 0 member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent. cyclic nucleotide-gated cation channel 4;(source:Araport11) Ipc02G0022800 AT3G17830.1 Molecular chaperone Hsp40/DnaJ family protein 0 Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11) Ipc02G0022810 AT2G20810.1 galacturonosyltransferase 10 Galacturonosyltransferase,regulator of root meristem maintenance. galacturonosyltransferase 10;(source:Araport11) Ipc02G0022820 AT5G54270.1 light-harvesting chlorophyll B-binding protein 3 Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II). light-harvesting chlorophyll B-binding protein 3;(source:Araport11) Ipc02G0022830 AT5G54280.2 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc02G0022840 AT4G27380.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0022850 AT4G32010.1 HSI2-like 1 0 HSI2-like 1;(source:Araport11) Ipc02G0022860 AT5G54310.1 ARF-GAP domain 5 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation. ARF-GAP domain 5;(source:Araport11) Ipc02G0022870 AT2G44810.1 alpha/beta-Hydrolases superfamily protein Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0022880 AT5G54380.1 protein kinase family protein Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. protein kinase family protein;(source:Araport11) Ipc02G0022890 AT3G48610.1 non-specific phospholipase C6 0 non-specific phospholipase C6;(source:Araport11) Ipc02G0022900 AT4G21570.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc02G0022910 AT4G27390.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0022920 AT4G27410.2 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes a NAC transcription factor induced in response to desiccation. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc02G0022930 AT1G61820.1 beta glucosidase 46 0 beta glucosidase 46;(source:Araport11) Ipc02G0022940 AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc02G0022950 AT3G15480.1 Protein of unknown function (DUF1218) 0 fiber (DUF1218);(source:Araport11) Ipc02G0022960 AT3G15470.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0022970 AT5G54190.1 protochlorophyllide oxidoreductase A light-dependent NADPH:protochlorophyllide oxidoreductase A protochlorophyllide oxidoreductase A;(source:Araport11) Ipc02G0022980 AT3G15390.1 silencing defective 5 Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing. silencing defective 5;(source:Araport11) Ipc02G0022990 AT3G15380.1 Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport, localizes to the trans-Golgi network, and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile, defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein;(source:Araport11) Ipc02G0023000 AT3G27320.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0023010 AT3G27340.1 0 0 Myb domain protein;(source:Araport11) Ipc02G0023020 AT3G01720.1 0 0 peptidyl serine alpha-galactosyltransferase;(source:Araport11) Ipc02G0023030 AT2G48110.1 reduced epidermal fluorescence 4 Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism. It has been shown to physically associate with the conserved transcriptional coregulatory complex, Mediator, and is involved in the regulation of phenylpropanoid homeostasis. Required for expression of some dark-upregulated genes. reduced epidermal fluorescence 4;(source:Araport11) Ipc02G0023040 AT5G40650.1 succinate dehydrogenase 2-2 One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth. succinate dehydrogenase 2-2;(source:Araport11) Ipc02G0023050 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc02G0023060 AT3G48440.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc02G0023070 AT1G67730.1 beta-ketoacyl reductase 1 Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. The mRNA is cell-to-cell mobile. beta-ketoacyl reductase 1;(source:Araport11) Ipc02G0023080 AT1G67730.1 beta-ketoacyl reductase 1 Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. The mRNA is cell-to-cell mobile. beta-ketoacyl reductase 1;(source:Araport11) Ipc02G0023090 AT3G46610.2 0 Chloroplast-localized PPR protein required for the translation of the psbJ and psbN open reading frames. TPJ(2019) shows that LPE1 is not required for psbA translation, in contrast to previous results (PNAS 2018). Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc02G0023100 AT5G14360.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc02G0023110 AT5G14370.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc02G0023120 AT3G03420.1 Ku70-binding family protein 0 Ku70-binding family protein;(source:Araport11) Ipc02G0023130 AT3G03420.1 Ku70-binding family protein 0 Ku70-binding family protein;(source:Araport11) Ipc02G0023140 AT5G40610.1 NAD-dependent glycerol-3-phosphate dehydrogenase family protein 0 NAD-dependent glycerol-3-phosphate dehydrogenase family protein;(source:Araport11) Ipc02G0023150 AT5G40600.4 0 0 bromodomain testis-specific protein;(source:Araport11) Ipc02G0023160 AT4G35850.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0023170 AT1G55810.6 0 One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively. uridine kinase-like 3;(source:Araport11) Ipc02G0023180 AT5G14450.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0023190 AT3G27460.1 SGF29 tudor-like domain 0 SGF29 tudor-like domain-containing protein;(source:Araport11) Ipc02G0023200 AT3G27470.4 0 0 lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11) Ipc02G0023210 AT5G14460.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc02G0023220 AT3G27520.1 0 0 cryptic loci regulator;(source:Araport11) Ipc02G0023230 AT5G40460.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc02G0023240 AT3G27650.1 LOB domain-containing protein 25 0 LOB domain-containing protein 25;(source:Araport11) Ipc02G0023250 AT3G01570.1 Oleosin family protein 0 Oleosin family protein;(source:Araport11) Ipc02G0023260 AT5G14550.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc02G0023270 AT1G01290.2 cofactor of nitrate reductase and xanthine dehydrogenase 3 COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria cofactor of nitrate reductase and xanthine dehydrogenase 3;(source:Araport11) Ipc02G0023280 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0023290 AT5G40380.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 42 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 42;(source:Araport11) Ipc02G0023300 AT5G17990.1 tryptophan biosynthesis 1 Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. The mRNA is cell-to-cell mobile. tryptophan biosynthesis 1;(source:Araport11) Ipc02G0023310 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0023320 AT5G62960.1 0 0 UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein;(source:Araport11) Ipc02G0023330 AT5G14600.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0023340 AT5G14610.1 DEAD box RNA helicase family protein 0 DEAD box RNA helicase family protein;(source:Araport11) Ipc02G0023350 AT5G14640.2 0 0 shaggy-like kinase 13;(source:Araport11) Ipc02G0023360 AT3G27810.1 myb domain protein 21 Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. MYB21 interacts with JAZ proteins, and functions redundantly with MYB24 and MYB57 to regulate stamen development. myb domain protein 21;(source:Araport11) Ipc02G0023370 AT3G27820.1 monodehydroascorbate reductase 4 Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2 monodehydroascorbate reductase 4;(source:Araport11) Ipc02G0023380 AT3G27830.2 0 50S ribosomal protein L12-AThe mRNA is cell-to-cell mobile. ribosomal protein L12-A;(source:Araport11) Ipc02G0023390 AT5G14700.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0023400 AT5G14710.1 0 0 proteasome assembly chaperone-like protein;(source:Araport11) Ipc02G0023410 AT5G14720.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0023420 AT3G27880.1 Protein of unknown function (DUF1645) 0 hypothetical protein (DUF1645);(source:Araport11) Ipc02G0023430 AT3G01510.1 like SEX4 1 Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves. like SEX4 1;(source:Araport11) Ipc02G0023440 AT3G27925.2 0 Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.The mRNA is cell-to-cell mobile. DegP protease 1;(source:Araport11) Ipc02G0023450 AT3G27950.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0023460 AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein AOR is an alkenal/one oxidoreductase that acts on compounds with unsaturated alpha,beta-carbonyls. The activity of this enzyme with a number of substrates, including acrolein and 3-buten-2-one, was demonstrated in vitro using a truncated form of the protein that lacked approximately 80 of the first amino acids. This protein appears to localize to the chloroplast where it likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc02G0023470 AT5G40280.1 Prenyltransferase family protein encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought. The mRNA is cell-to-cell mobile. Prenyltransferase family protein;(source:Araport11) Ipc02G0023480 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0023490 AT5G14780.1 formate dehydrogenase Encodes a NAD-dependent formate dehydrogenase. formate dehydrogenase;(source:Araport11) Ipc02G0023500 AT1G23750.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0023510 AT1G55205.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0023520 AT3G01480.1 cyclophilin 38 Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes. The mRNA is cell-to-cell mobile. cyclophilin 38;(source:Araport11) Ipc02G0023530 AT5G62850.1 Nodulin MtN3 family protein Encodes a protein that is expressed in vegetative cells of pollen. A member of the SWEET sucrose efflux transporter family proteins. Nodulin MtN3 family protein;(source:Araport11) Ipc02G0023540 AT5G13030.1 0 Chloroplast localized homolog of SELO. Loss of function mutants have reduced production of reactive oxygen species (ROS) and higher ROS scavenging. selenoprotein O;(source:Araport11) Ipc02G0023550 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc02G0023560 AT5G14890.1 NHL domain-containing protein 0 potassium transporter;(source:Araport11) Ipc02G0023570 AT5G40250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0023580 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0023590 AT5G15080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0023600 AT2G02760.4 0 ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. ubiquiting-conjugating enzyme 2;(source:Araport11) Ipc02G0023610 AT5G39890.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc02G0023620 AT3G28715.1 ATPase, V0/A0 complex, subunit C/D 0 ATPase, V0/A0 complex, subunit C/D;(source:Araport11) Ipc02G0023630 AT3G26510.6 0 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc02G0023640 AT5G25150.1 TBP-associated factor 5 Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID). TBP-associated factor 5;(source:Araport11) Ipc02G0023650 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc02G0023660 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc02G0023670 AT3G28630.1 Protein of unknown function (DUF569) 0 actin cross-linking protein, putative (DUF569);(source:Araport11) Ipc02G0023680 AT5G39980.1 Tetratricopeptide repeat (TPR)-like superfamily protein PDM3 belongs to the P subfamily of PPR proteins.Mutants have defective chloroplasts and accumulates unspliced plastid RNAs suggesting a role in RNA splicing. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0023690 AT5G15050.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14B. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc02G0023700 AT5G40030.1 Protein kinase superfamily protein Member of AGC VIIIa Kinase gene family. Protein kinase superfamily protein;(source:Araport11) Ipc02G0023710 AT3G28460.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc02G0023720 AT3G28455.1 CLAVATA3/ESR-RELATED 25 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.CLE25 participates in long distance signaling in response to dehydration. It produces a graft transmissible signal from root to shoot that induces ABA synthesis and results in stomatal closure. The BAM1 and BAM3 receptor-kinases are likely receptors for CLE25 as they are required for this signaling. CLAVATA3/ESR-RELATED 25;(source:Araport11) Ipc02G0023730 AT3G28450.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0023740 AT3G20250.3 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. APUM5 is involved in susceptibility to CMV and is not required for bacterial or fungal pathogen resistance although its expression is induced upon bacterial and fungal infection. It is involved in the osmotic, salt, and drought stress responses. pumilio 5;(source:Araport11) Ipc02G0023750 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc02G0023760 AT5G15020.2 SIN3-like 2 Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). SIN3-like 2;(source:Araport11) Ipc02G0023770 AT5G14970.1 0 0 seed maturation-like protein;(source:Araport11) Ipc02G0023780 AT3G48140.1 B12D protein 0 B12D protein;(source:Araport11) Ipc02G0023790 AT2G30050.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0023800 AT1G74910.2 ADP-glucose pyrophosphorylase family protein KONJAC1 is imilar to sugar pyrophosphorylases but has an insertion of 2 AA in the pyrophosphorylase consensus motif that is highly conserved in GMPPs. It lacks GDP-mannose pyrophosphorylase activity but can simulate GDP-mannose pyrophosphorylase activity of VTC1. ADP-glucose pyrophosphorylase family protein;(source:Araport11) Ipc02G0023810 AT5G14940.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0023820 AT3G01370.1 CRM family member 2 Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing. CRM family member 2;(source:Araport11) Ipc02G0023830 AT2G04700.3 0 Encodes catalytic subunit of ferredoxin/thioredoxin reductase. ferredoxin thioredoxin reductase catalytic beta chain family protein;(source:Araport11) Ipc02G0023840 AT1G70180.2 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc02G0023850 AT5G40140.1 RING/U-box superfamily protein with ARM repeat domain Encodes a ubiquitin E3 ligase of the U-box type that mediates the proteasomal degradation of BZR1 in a root-specific manner. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc02G0023860 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0023870 AT3G28180.1 Cellulose-synthase-like C4 encodes a gene similar to cellulose synthase The mRNA is cell-to-cell mobile. Cellulose-synthase-like C4;(source:Araport11) Ipc02G0023880 AT2G20830.2 transferases;folic acid binding 0 folic acid binding / transferase;(source:Araport11) Ipc02G0023890 AT1G56020.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc02G0023900 AT2G18210.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0023910 AT5G66470.2 0 0 GTP-binding protein Era-like protein;(source:Araport11) Ipc02G0023920 AT5G66450.2 Phosphatidic acid phosphatase (PAP2) family protein Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene (LPPepsilon2) and LPPepsilon1, appear to be less important for diacylglycerol formation in the plastids than LPPgamma. Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc02G0023930 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc02G0023940 AT1G19630.1 cytochrome P450, family 722, subfamily A, polypeptide 1 0 cytochrome P450, family 722, subfamily A, polypeptide 1;(source:Araport11) Ipc02G0023950 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc02G0023960 AT1G75420.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0023970 AT4G36440.1 0 0 G-protein coupled receptor;(source:Araport11) Ipc02G0023980 AT4G36420.1 Ribosomal protein L12 family protein 0 Ribosomal protein L12 family protein;(source:Araport11) Ipc02G0023990 AT1G75440.1 ubiquitin-conjugating enzyme 16 0 ubiquitin-conjugating enzyme 16;(source:Araport11) Ipc02G0024000 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc02G0024010 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc02G0024020 AT4G36400.2 FAD-linked oxidases family protein Encodes a (D)-2-hydroxyglutarate dehydrogenase. FAD-linked oxidases family protein;(source:Araport11) Ipc02G0024030 AT4G36280.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Member of the microrchidia protein family which have been described as epigenetic regulators and plant immune mediators, contains a hallmark GHKL-type ATPase domain in N-terminus. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc02G0024040 AT3G51050.1 FG-GAP repeat-containing protein NERD1 is a single copy locus encoding a protein of unknown function that is localized to the nucleus. Single mutants show defects in root hair growth, root meristem function, cell elongation. NERD1 appears to act synergistically with the exocyst in root development. FG-GAP repeat-containing protein;(source:Araport11) Ipc02G0024050 AT3G51060.1 Lateral root primordium (LRP) protein-related A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) Lateral root primordium (LRP) protein-like protein;(source:Araport11) Ipc02G0024060 AT5G66320.2 GATA transcription factor 5 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5;(source:Araport11) Ipc02G0024070 #N/A #N/A #N/A #N/A Ipc02G0024080 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc02G0024090 AT5G19730.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0024100 AT4G38960.6 0 BBX19 is a B-box containing transcriptional regulator involved in photomporphogenesis and flowering. B-box type zinc finger family protein;(source:Araport11) Ipc02G0024110 AT1G15380.2 Lactoylglutathione lyase / glyoxalase I family protein Glyoxalase which affects ABA?JA crosstalk. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc02G0024120 AT1G11390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0024130 AT3G51150.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc02G0024140 AT2G18050.1 histone H1-3 encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. The mRNA is cell-to-cell mobile. histone H1-3;(source:Araport11) Ipc02G0024150 AT1G75640.1 Leucine-rich receptor-like protein kinase family protein Encodes a Leucine-Rich Repeat Receptor-Like Kinase MUSTACHES (MUS). Regulates stomatal bilateral symmetry. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc02G0024160 AT5G66290.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0024170 AT3G51160.1 NAD(P)-binding Rossmann-fold superfamily protein Catalyzes the first step in the de novo synthesis of GDP-L-fucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0024180 AT1G20580.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc02G0024190 AT4G36110.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0024200 AT2G17972.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0024210 AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0024220 AT1G75720.1 Plant protein of unknown function (DUF827) 0 WEB family protein (DUF827);(source:Araport11) Ipc02G0024230 AT5G66230.1 Chalcone-flavanone isomerase family protein 0 Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc02G0024240 AT2G17890.1 calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated. calcium-dependent protein kinase 16;(source:Araport11) Ipc02G0024250 #N/A #N/A #N/A #N/A Ipc02G0024260 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc02G0024270 AT4G38660.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc02G0024280 AT4G35987.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0024290 AT2G21045.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc02G0024300 AT4G38630.1 regulatory particle non-ATPase 10 Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities regulatory particle non-ATPase 10;(source:Araport11) Ipc02G0024310 AT3G51250.1 Senescence/dehydration-associated protein-related 0 Senescence/dehydration-associated protein-like protein;(source:Araport11) Ipc02G0024320 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) Ipc02G0024330 AT4G35980.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0024340 AT5G66120.2 3-dehydroquinate synthase, putative 0 3-dehydroquinate synthase;(source:Araport11) Ipc02G0024350 AT1G10095.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc02G0024360 AT2G17800.2 Arabidopsis RAC-like 1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. RAC-like 1;(source:Araport11) Ipc02G0024370 AT1G75850.1 VPS35 homolog B 0 VPS35 homolog B;(source:Araport11) Ipc02G0024380 AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc02G0024390 AT5G66120.2 3-dehydroquinate synthase, putative 0 3-dehydroquinate synthase;(source:Araport11) Ipc02G0024400 AT1G20110.1 RING/FYVE/PHD zinc finger superfamily protein Encodes a protein that is localized to the peripheral membrane of late endosomal compartments. Involved in the regulation of mulitivesicular/prevacuolar compartment protein sorting. Loss of function mutations are embryo lethal. Regulates IRT1-dependent metal transport and metal homeostasis. The mRNA is cell-to-cell mobile. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc02G0024410 AT4G35920.5 0 Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium. PLAC8 family protein;(source:Araport11) Ipc02G0024420 AT4G35905.1 0 0 Trm112p-like protein;(source:Araport11) Ipc02G0024430 AT3G51325.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0024440 AT4G35900.1 Basic-leucine zipper (bZIP) transcription factor family protein bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc02G0024450 AT4G35890.1 winged-helix DNA-binding transcription factor family protein Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence. The mRNA is cell-to-cell mobile. winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc02G0024460 AT3G51370.3 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0024470 AT4G35840.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0024480 AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0024490 AT4G35790.2 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc02G0024500 AT5G66050.3 0 0 Wound-responsive family protein;(source:Araport11) Ipc02G0024510 AT5G66040.1 sulfurtransferase protein 16 Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo. The mRNA is cell-to-cell mobile. sulfurtransferase protein 16;(source:Araport11) Ipc02G0024520 AT4G35760.1 NAD(P)H dehydrogenase (quinone)s Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid. Required for the assembly of photosystem II. Can catalyze disulfide bond formation in vitro. NAD(P)H dehydrogenase (quinone)s;(source:Araport11) Ipc02G0024530 AT4G35750.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein 0 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc02G0024540 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0024550 AT4G35660.1 Arabidopsis protein of unknown function (DUF241) 0 selection/upkeep of intraepithelial T-cells protein, putative (DUF241);(source:Araport11) Ipc02G0024560 AT2G17670.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0024570 AT2G38320.1 TRICHOME BIREFRINGENCE-LIKE 34 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL34 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. This biochemical phenotype can be observed in tbl34 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 34;(source:Araport11) Ipc02G0024580 AT4G29960.1 0 EBS7 encodes a plant specific, endoplasmic reticulum localized protein that is involved in endoplasmic reticulum-associated degradation (ERAD). It interacts with the ERAD component AtHRD1a and may regulate HRD1a stability. Identified in a screen for supressors of a mutation in bri1 that causes bri1 to be retained in the ER. Loss of EBS7 function restores BR sensitivity in the bri1-9 mutant allele. transmembrane protein;(source:Araport11) Ipc02G0024590 AT1G20560.1 acyl activating enzyme 1 0 acyl activating enzyme 1;(source:Araport11) Ipc02G0024600 AT1G20610.1 Cyclin B2;3 0 Cyclin B2;(source:Araport11) Ipc02G0024610 AT4G27990.1 YGGT family protein One of four Arabidopsis homologs of bacterial ymlg proteins. YGGT family protein;(source:Araport11) Ipc02G0024620 AT2G17570.1 Undecaprenyl pyrophosphate synthetase family protein 0 Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc02G0024630 AT5G66005.3 Expressed protein 0 Expressed protein;(source:Araport11) Ipc02G0024640 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc02G0024650 AT5G10290.2 0 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc02G0024660 AT4G35540.1 zinc ion binding;transcription regulators Encodes a novel plant-specific TFIIB-related protein that can interact with TBP2 and bind DNA. It can also form a homodimer and interact with the subunits of RNA polymerases. Mutant pollen fails to germinate. POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2;(source:Araport11) Ipc02G0024670 AT1G22410.1 Class-II DAHP synthetase family protein 0 Class-II DAHP synthetase family protein;(source:Araport11) Ipc02G0024680 AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0024690 AT2G22400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein TRM4B is a cytosine-5--methyltransferase. Mutants have decreased methyl cytosine and defects in root development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0024700 AT2G22420.1 Peroxidase superfamily protein Encodes a cell wall-localized class III peroxidase that is directly regulated by the MADS-box transcription factor AGL15 and is involved in lignified tissue formation. Peroxidase superfamily protein;(source:Araport11) Ipc02G0024710 AT4G40020.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc02G0024720 AT4G40050.1 Protein of unknown function (DUF3550/UPF0682) 0 signal transducer, putative (DUF3550/UPF0682);(source:Araport11) Ipc02G0024730 AT1G42960.1 0 expressed protein localized to the inner membrane of the chloroplast. inner membrane localized protein;(source:Araport11) Ipc02G0024740 AT2G17480.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc02G0024750 AT4G35470.1 plant intracellular ras group-related LRR 4 Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. plant intracellular ras group-related LRR 4;(source:Araport11) Ipc02G0024760 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc02G0024770 AT5G24740.3 0 Encodes a vacuolar sorting protein that interacts with the plant-specific GRAS family transcription factor SHORT-ROOT and acts in a pathway that controls root growth and radial patterning. It provides a connections between gibberellic acid, SHR and PLT signaling in the root. vacuolar protein sorting-associated protein, putative (DUF1162);(source:Araport11) Ipc02G0024790 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc02G0024780 AT1G27510.1 Protein of unknown function (DUF3506) Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death. UvrB/UvrC domain protein (DUF3506);(source:Araport11) Ipc02G0024800 #N/A #N/A #N/A #N/A Ipc02G0024810 AT2G17420.1 NADPH-dependent thioredoxin reductase A NADPH-dependent thioredoxin reductase, major cytosolic isoform The mRNA is cell-to-cell mobile. NADPH-dependent thioredoxin reductase A;(source:Araport11) Ipc02G0024820 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc02G0024830 AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0024840 AT1G76520.2 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc02G0024850 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc02G0024860 AT3G51520.1 diacylglycerol acyltransferase family Encodes a functional acyl-CoA:diacylglycerol acyltransferase with different acyl-CoA substrate preferences and shows higher DAG to TAG conversion rate than AtDGAT1. It increases both C18:2 and C18:3 polyunsaturated fatty acids at the expense of C16:0. diacylglycerol acyltransferase family;(source:Araport11) Ipc02G0024870 AT3G51510.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0024880 AT5G06740.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0024890 AT5G37020.1 auxin response factor 8 Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. auxin response factor 8;(source:Araport11) Ipc02G0024900 AT1G06720.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0024910 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc02G0024920 AT3G02700.1 NC domain-containing protein-related 0 NC domain-containing protein-like protein;(source:Araport11) Ipc02G0024930 AT1G65840.1 polyamine oxidase 4 encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes. The mRNA is cell-to-cell mobile. polyamine oxidase 4;(source:Araport11) Ipc02G0024940 AT5G45130.1 RAB homolog 1 small GTP binding protein The mRNA is cell-to-cell mobile. Ras small GTP-binding family protein;(source:Araport11) Ipc02G0024950 AT1G73370.3 0 Encodes a protein with sucrose synthase activity (SUS6). sucrose synthase 6;(source:Araport11) Ipc02G0024960 AT1G65900.1 0 0 plant/protein;(source:Araport11) Ipc02G0024970 AT1G65920.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc02G0024980 AT5G17300.1 Homeodomain-like superfamily protein Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner. Homeodomain-like superfamily protein;(source:Araport11) Ipc02G0024990 AT1G65950.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0025000 AT3G03270.2 Adenine nucleotide alpha hydrolases-like superfamily protein HRU1 is a hypoxia induced universal stress protein. It exists as two splice variants with AT3G03270.2 , which contains a putative dimerization domain, the predominant transcript found under anoxia. It is induced by RAP2.12. Subcellular localization is dynamic; under anoxia the localization of HRU1 shifts from cytoplasm to the plasma membrane. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc02G0025010 AT1G74800.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline galactosyltransferase GALT5. Functions together with GALT2 as redundant GALTs that control AGP (arabinogalactan-proteins) O-glycosylation, which is essential for normal growth and development. Mutants display multiple phenotypes including reduced root hair growth. Galactosyltransferase family protein;(source:Araport11) Ipc02G0025020 AT5G37478.1 TPX2 (targeting protein for Xklp2) protein family 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc02G0025030 AT1G25250.3 0 Encodes a transcription factor that, together with IDD14 and IDD15, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses . IDD16 also binds to the SPCH promoter and regulates stomata initiation. indeterminate(ID)-domain 16;(source:Araport11) Ipc02G0025040 AT5G16550.1 0 Lipid droplet protein associated with LDAP3. voltage-dependent L-type calcium channel subunit;(source:Araport11) Ipc02G0025050 AT3G21540.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0025060 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc02G0025070 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc02G0025080 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc02G0025090 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc02G0025100 AT5G37490.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0025110 AT3G02850.1 STELAR K+ outward rectifier Encodes SKOR, a member of Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+. Involved in response to low potassium. STELAR K+ outward rectifier;(source:Araport11) Ipc08G0006570 AT4G14710.6 0 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc08G0006580 AT1G30970.1 zinc finger (C2H2 type) family protein Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc08G0006590 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0006600 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0006610 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006620 ATCG00480.1 ATP synthase subunit beta chloroplast-encoded gene for beta subunit of ATP synthase ATP synthase subunit beta;(source:Araport11) Ipc08G0006630 AT1G30900.1 VACUOLAR SORTING RECEPTOR 6 0 VACUOLAR SORTING RECEPTOR 6;(source:Araport11) Ipc05G0000380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000370 AT2G40435.1 0 0 transcription factor SCREAM-like protein;(source:Araport11) Ipc05G0000360 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0000350 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0000340 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc05G0000330 AT2G31800.1 Integrin-linked protein kinase family 0 Integrin-linked protein kinase family;(source:Araport11) Ipc05G0000320 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc05G0000310 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000300 AT3G51730.1 saposin B domain-containing protein 0 saposin B domain-containing protein;(source:Araport11) Ipc05G0000290 AT3G51640.3 0 0 stress response NST1-like protein;(source:Araport11) Ipc05G0000280 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc05G0000270 #N/A #N/A #N/A #N/A Ipc05G0000260 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0000250 AT5G06100.5 0 Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. myb domain protein 33;(source:Araport11) Ipc05G0000240 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc05G0000230 AT2G30360.1 SOS3-interacting protein 4 Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter. SOS3-interacting protein 4;(source:Araport11) Ipc05G0000220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000200 AT1G26440.4 ureide permease 5 encodes a ureide permease, uptake assays in yeast mutants indicated the longer splice variant is a cellular importer for allantoin, uracil and xanthine ureide permease 5;(source:Araport11) Ipc05G0000190 AT1G05880.3 0 Encodes ARI12 (ARIADNE 12). ARI12 belongs to a family of ?RING between RING fingers Prime (RBR) domain proteins with E3 ligase activity. Expression of ARI12 is induced by UV-B exposure. RING/U-box superfamily protein;(source:Araport11) Ipc05G0000180 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0000170 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc05G0000160 AT5G01840.1 ovate family protein 1 Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. ovate family protein 1;(source:Araport11) Ipc05G0000150 AT4G28130.1 diacylglycerol kinase 6 0 diacylglycerol kinase 6;(source:Araport11) Ipc05G0000140 AT4G35650.1 isocitrate dehydrogenase III Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. In contrast to the broadly expressed other regulatory (IDH-I and IDH-II) and catalytic (IDH-V and IDH-VI) subunits of this enzyme, IDH-III expression appears to be restricted largely to pollen. isocitrate dehydrogenase III;(source:Araport11) Ipc05G0000130 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc05G0000120 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0000110 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc04G0003350 AT5G60140.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003340 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0003320 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003310 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc04G0003300 AT3G49660.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0000980 AT3G06220.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003290 AT1G17880.1 basic transcription factor 3 0 basic transcription factor 3;(source:Araport11) Ipc04G0003390 AT5G57720.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003280 AT5G40660.1 ATP12 protein-related 0 ATP12 protein-like protein;(source:Araport11) Ipc04G0003270 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc04G0003260 AT5G35732.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0003250 AT3G19640.1 magnesium transporter 4 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 4;(source:Araport11) Ipc04G0003240 AT5G19210.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0003230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003210 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0003200 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0003190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003180 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003160 AT5G62410.1 structural maintenance of chromosomes 2 SMC2-1 (SMC2) structural maintenance of chromosomes 2;(source:Araport11) Ipc10G0019920 AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0019930 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc10G0019940 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0019950 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc10G0019960 AT1G61250.2 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc10G0019970 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0019980 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0019990 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0020000 AT5G22930.1 Protein of unknown function (DUF1635) 0 enabled-like protein (DUF1635);(source:Araport11) Ipc10G0020010 AT3G19050.1 phragmoplast orienting kinesin 2 PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2;(source:Araport11) Ipc10G0020020 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) IpcGene22851 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) IpcGene22853 AT4G21460.2 0 0 Ribosomal protein S24/S35;(source:Araport11) IpcGene22854 AT5G12360.2 0 Encodes a protein that protects meiotic centromere cohesion. hypothetical protein;(source:Araport11) Ipc12G0004410 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0004420 AT4G36870.4 0 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw2 may act redundantly to repress BP in leaves. BEL1-like homeodomain 2;(source:Araport11) Ipc12G0004430 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0004440 AT1G73760.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0004450 AT1G73740.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0004460 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc12G0004470 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc12G0004480 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc12G0004490 AT1G53450.3 0 0 epstein-barr nuclear antigen;(source:Araport11) Ipc12G0004500 AT1G48720.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0004510 AT1G12220.3 0 Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc12G0004520 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0004530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004550 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004560 AT1G27430.3 0 0 GYF domain-containing protein;(source:Araport11) Ipc12G0004570 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0004580 AT3G18190.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc12G0004590 AT5G27890.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0004600 AT3G18215.1 Protein of unknown function, DUF599 0 transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc06G0000940 AT1G08420.1 BRI1 suppressor 1 (BSU1)-like 2 0 BRI1 suppressor 1 (BSU1)-like 2;(source:Araport11) Ipc06G0000930 AT3G44160.1 Outer membrane OMP85 family protein Encodes a chloroplast-localized Omp85 family member. Members of this family chaperone the membrane insertion of beta-barrel-shaped outer membrane proteins in bacteria, mitochondria and probably chloroplasts and facilitate the transfer of nuclear-encoded cytosolically synthesized preproteins across the outer envelope of chloroplasts. Outer membrane OMP85 family protein;(source:Araport11) Ipc06G0000860 AT3G22190.4 0 0 IQ-domain 5;(source:Araport11) Ipc06G0000910 AT5G22060.1 DNAJ homologue 2 Co-chaperonin similar to E. coli DnaJ DNAJ homologue 2;(source:Araport11) Ipc06G0000840 AT5G22050.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0000810 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000890 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003420 AT1G43900.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0003410 AT5G60140.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003400 AT5G57720.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003380 #N/A #N/A #N/A #N/A Ipc09G0008430 AT1G12410.1 CLP protease proteolytic subunit 2 Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease proteolytic subunit 2;(source:Araport11) Ipc09G0008420 AT1G12370.2 photolyase 1 encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele photolyase 1;(source:Araport11) Ipc09G0008410 AT1G12360.1 Sec1/munc18-like (SM) proteins superfamily encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis. Sec1/munc18-like (SM) proteins superfamily;(source:Araport11) Ipc09G0008400 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc09G0008390 AT1G62850.3 Class I peptide chain release factor 0 Class I peptide chain release factor;(source:Araport11) Ipc09G0008380 AT2G45360.1 Protein of unknown function (DUF1442) 0 ankyrin repeat/KH domain protein (DUF1442);(source:Araport11) Ipc09G0008370 AT1G65010.1 Plant protein of unknown function (DUF827) Encodes a microtubule-associated protein. Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication). WEB family protein (DUF827);(source:Araport11) Ipc09G0008360 AT4G22730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0008350 AT1G09090.2 respiratory burst oxidase homolog B NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-ß mRNA and prevented prevented AtrbohB-a mRNA expression in fresh seeds. respiratory burst oxidase-like protein;(source:Araport11) Ipc09G0008340 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0008330 AT2G45310.1 UDP-D-glucuronate 4-epimerase 4 UDP-D-glucuronate 4-epimerase UDP-D-glucuronate 4-epimerase 4;(source:Araport11) Ipc09G0008320 AT4G00110.1 UDP-D-glucuronate 4-epimerase 3 Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. UDP-D-glucuronate 4-epimerase 3;(source:Araport11) Ipc09G0008310 AT4G12300.1 cytochrome P450, family 706, subfamily A, polypeptide 4 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 4;(source:Araport11) Ipc09G0008300 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008290 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0008280 AT4G12320.1 cytochrome P450, family 706, subfamily A, polypeptide 6 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 6;(source:Araport11) Ipc09G0008270 AT4G12320.1 cytochrome P450, family 706, subfamily A, polypeptide 6 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 6;(source:Araport11) Ipc09G0008260 AT4G12350.1 myb domain protein 42 Encodes a putative transcription factor (MYB42). myb domain protein 42;(source:Araport11) Ipc09G0008250 AT3G45530.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc09G0008240 AT2G19950.1 golgin candidate 1 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein. golgin Putative 1;(source:Araport11) Ipc09G0008230 AT4G22670.1 HSP70-interacting protein 1 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The mRNA is cell-to-cell mobile. HSP70-interacting protein 1;(source:Araport11) Ipc09G0008220 AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0008210 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0008200 AT5G60590.2 DHBP synthase RibB-like alpha/beta domain 0 DHBP synthase RibB-like alpha/beta domain-containing protein;(source:Araport11) Ipc09G0008190 AT5G62350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc09G0008180 AT4G23460.1 Adaptin family protein 0 Adaptin family protein;(source:Araport11) Ipc09G0008170 AT5G39580.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc09G0008160 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0008150 AT3G61460.1 brassinosteroid-responsive RING-H2 Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. brassinosteroid-responsive RING-H2;(source:Araport11) Ipc09G0008140 AT4G19460.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0008130 AT4G11280.1 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family The mRNA is cell-to-cell mobile. 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6;(source:Araport11) Ipc09G0008120 AT5G41560.1 0 Encodes a substrate receptor for CRL4-CDD complexes that provides substrate specificity for CRL4 by interacting with ubiquitination targets. By its interaction and regulation of levels of PYL8 through proteasomal degradation, it negatively regulates ABA-mediated developmental responses, including inhibition of seed germination, seedling establishment, and root growth DET1 complexing ubiquitin ligase;(source:Araport11) Ipc09G0008110 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0008100 AT1G64000.1 WRKY DNA-binding protein 56 member of WRKY Transcription Factor; Group II-c WRKY DNA-binding protein 56;(source:Araport11) Ipc09G0008090 AT5G41580.1 RING/U-box superfamily protein Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response. RING/U-box superfamily protein;(source:Araport11) Ipc09G0008080 #N/A #N/A #N/A #N/A Ipc09G0008070 AT5G18580.1 tonneau 2 (TON2) fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system. tonneau 2 (TON2);(source:Araport11) Ipc09G0008060 AT4G11240.1 Calcineurin-like metallo-phosphoesterase superfamily protein encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc09G0008050 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0008040 AT5G06410.1 DNAJ heat shock N-terminal domain-containing protein HscB is a mitochondrial cochaperone involved in [Fe-S] cluster biosynthesis and iron homeostasis. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc09G0008030 AT1G76160.1 SKU5 similar 5 0 SKU5 similar 5;(source:Araport11) Ipc09G0008020 AT1G76150.1 enoyl-CoA hydratase 2 Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves. enoyl-CoA hydratase 2;(source:Araport11) Ipc09G0008010 AT1G20370.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc09G0008000 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc09G0007990 AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein 0 Cellulase (glycosyl hydrolase family 5) protein;(source:Araport11) Ipc09G0007980 AT4G16745.2 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc09G0007970 AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein 0 Cellulase (glycosyl hydrolase family 5) protein;(source:Araport11) Ipc09G0007960 AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein 0 Cellulase (glycosyl hydrolase family 5) protein;(source:Araport11) Ipc09G0007950 AT1G64110.5 0 Target promoter of the male germline-specific transcription factor DUO1. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0019760 AT5G47320.1 ribosomal protein S19 Nuclear encoded mitochondrial ribosome subunit. The mRNA is cell-to-cell mobile. ribosomal protein S19;(source:Araport11) Ipc11G0002320 AT2G46505.1 succinate dehydrogenase subunit 4 Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion. succinate dehydrogenase subunit 4;(source:Araport11) Ipc11G0002280 AT4G08450.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc09G0007940 AT2G07785.1 NADH dehydrogenase family protein 0 NADH dehydrogenase family protein;(source:Araport11) Ipc09G0007930 #N/A #N/A #N/A #N/A Ipc09G0007920 AT1G64140.1 0 0 WRKY transcription factor;(source:Araport11) Ipc09G0007910 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0007900 AT4G23700.2 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 17;(source:Araport11) Ipc09G0007890 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0007880 AT5G41610.3 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 18;(source:Araport11) Ipc09G0007870 AT5G41620.1 0 0 intracellular protein transporter USO1-like protein;(source:Araport11) Ipc09G0007860 #N/A #N/A #N/A #N/A Ipc09G0007850 AT5G18636.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc09G0007840 AT2G46260.1 BTB/POZ/Kelch-associated protein Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. BTB/POZ/Kelch-associated protein;(source:Araport11) Ipc09G0007830 AT4G11150.1 vacuolar ATP synthase subunit E1 Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit E1;(source:Araport11) Ipc09G0007820 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0007810 AT2G41705.4 0 Encodes a fluoride export protein. camphor resistance CrcB family protein;(source:Araport11) Ipc09G0007800 #N/A #N/A #N/A #N/A Ipc09G0007790 AT4G23750.2 cytokinin response factor 2 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 2;(source:Araport11) Ipc09G0007780 AT1G64300.2 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc09G0007770 AT3G61670.1 Protein of unknown function (DUF3133) 0 extra-large G-like protein, putative (DUF3133);(source:Araport11) Ipc09G0007760 AT1G79610.1 Na+/H+ antiporter 6 Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity. Na+/H+ antiporter 6;(source:Araport11) Ipc09G0007750 AT3G04440.2 0 0 Plasma-membrane choline transporter family protein;(source:Araport11) Ipc09G0007740 #N/A #N/A #N/A #N/A Ipc09G0007730 AT5G25080.1 Sas10/Utp3/C1D family 0 Sas10/Utp3/C1D family;(source:Araport11) Ipc09G0007720 AT5G41810.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc09G0007710 AT4G23820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc09G0007700 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0007690 AT2G28840.1 XB3 ortholog 1 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc09G0007680 AT5G53160.2 regulatory components of ABA receptor 3 Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile. regulatory components of ABA receptor 3;(source:Araport11) Ipc09G0007670 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0007660 AT4G23850.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc09G0007650 AT5G62050.1 homolog of yeast oxidase assembly 1 (OXA1) essential factor for protein sorting and assembly into membranes inner membrane OXA1-like protein;(source:Araport11) Ipc09G0007640 AT5G53110.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0007630 AT5G45720.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc09G0007620 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc09G0007610 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0007600 AT2G23070.1 Protein kinase superfamily protein Encodes a chloroplast localized subunit of casien kinase4. Functions reduntantly with other alpha subunits (1, 2,and 3) in ABA mediated suppression of seed germination, lateral root development and flowering time. Protein kinase superfamily protein;(source:Araport11) Ipc09G0007590 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0007580 AT4G37580.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein involved in apical hook development. putative N-acetyltransferase Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc09G0007570 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0007560 AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 Encodes a protein with UDP-D-glucose 4-epimerase activity. UDP-D-glucose/UDP-D-galactose 4-epimerase 5;(source:Araport11) Ipc09G0007550 AT2G29560.1 cytosolic enolase Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm. The mRNA is cell-to-cell mobile. cytosolic enolase;(source:Araport11) Ipc09G0007540 AT3G11730.1 Ras-related small GTP-binding family protein Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein. Ras-related small GTP-binding family protein;(source:Araport11) Ipc09G0007530 #N/A #N/A #N/A #N/A Ipc09G0007520 AT5G67470.1 formin homolog 6 0 formin homolog 6;(source:Araport11) Ipc09G0007510 AT4G23930.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc09G0007500 AT2G46500.2 phosphoinositide 4-kinase gamma 4 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro. phosphoinositide 4-kinase gamma 4;(source:Araport11) Ipc09G0007490 AT4G10950.2 0 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc09G0007480 AT1G64480.3 0 calcineurin B-like protein 8, member of plant-specific family of calcium sensor proteins containing 3 EF-hand motifs calcineurin B-like protein 8;(source:Araport11) Ipc09G0007470 AT3G27170.1 chloride channel B member of Anion channel protein family The mRNA is cell-to-cell mobile. chloride channel B;(source:Araport11) Ipc09G0007460 AT4G23950.1 Galactose-binding protein Encodes a member of the mid-SUN subfamily of SUN-domain proteins. It is involved in early seed development and nuclear morphology. Galactose-binding protein;(source:Araport11) Ipc09G0007450 AT4G10920.2 transcriptional coactivator p15 (PC4) family protein (KELP) Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development. transcriptional coactivator p15 (PC4) family protein (KELP);(source:Araport11) Ipc09G0007440 AT3G61920.1 0 0 UvrABC system protein C;(source:Araport11) Ipc09G0007430 #N/A #N/A #N/A #N/A Ipc09G0007420 AT1G64500.1 Glutaredoxin family protein A member of a protein family found in plants and animals that contain conserved C-terminal glutaredoxin-like and putative zinc-binding cysteine-rich domains. It is involved in light stimulated actin bundling and chloroplast movement. The mRNA is cell-to-cell mobile. Glutaredoxin family protein;(source:Araport11) Ipc09G0007410 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0007400 AT5G42050.1 DCD (Development and Cell Death) domain protein Stress responsive asparagine-rich protein. Binds to PevD (Verticillium dahliae ) fungal effector protein. NRP interacts with CRY2, leading to increased cytoplasmic accumulation of CRY2 in a blue light-independent manner (PMID:28633330).NRP also binds FyPP3 and recruits it to endosomes and thus targets it for degradation. DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc09G0007390 AT4G23990.1 cellulose synthase like G3 encodes a protein similar to cellulose synthase cellulose synthase like G3;(source:Araport11) Ipc09G0007380 AT5G20090.4 0 MPC1 negatively regulates ABA enhanced slow anion channel function during stomatal closure. Uncharacterized protein family (UPF0041);(source:Araport11) Ipc09G0007370 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0007360 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc09G0007350 AT4G10850.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc09G0007340 AT4G10850.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc09G0007330 AT4G10850.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc09G0007320 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0007310 AT5G62850.2 0 Encodes a protein that is expressed in vegetative cells of pollen. A member of the SWEET sucrose efflux transporter family proteins. Nodulin MtN3 family protein;(source:Araport11) Ipc09G0007300 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc09G0007290 AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative 0 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11) Ipc09G0007280 AT4G24040.1 trehalase 1 Encodes a trehalase, member of Glycoside Hydrolase Family 37. trehalase 1;(source:Araport11) Ipc09G0007270 AT5G16770.4 0 Member of the R2R3 factor gene family. myb domain protein 9;(source:Araport11) Ipc09G0007260 AT2G18180.2 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc09G0007250 AT4G24060.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc09G0007240 AT5G42000.1 ORMDL family protein 0 ORMDL family protein;(source:Araport11) Ipc09G0007230 AT1G01225.1 NC domain-containing protein-related 0 NC domain-containing protein-like protein;(source:Araport11) Ipc09G0007220 AT5G41960.1 0 0 zinc finger matrin-type protein;(source:Araport11) Ipc09G0007210 AT4G24120.1 YELLOW STRIPE like 1 Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1). YELLOW STRIPE like 1;(source:Araport11) Ipc09G0007200 AT5G24630.8 0 This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells. double-stranded DNA binding protein;(source:Araport11) Ipc09G0007190 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc15G0014060 AT2G26200.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0014050 AT5G11990.1 proline-rich family protein 0 proline-rich family protein;(source:Araport11) Ipc15G0014040 AT5G12000.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc15G0014030 AT5G12010.1 0 0 nuclease;(source:Araport11) Ipc15G0014020 AT5G58590.1 RAN binding protein 1 Encodes a Ran-binding protein 1 homolog (RanBP1). RAN binding protein 1;(source:Araport11) Ipc15G0014010 AT4G33090.1 aminopeptidase M1 encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2). aminopeptidase M1;(source:Araport11) Ipc15G0014000 AT4G31690.1 Transcriptional factor B3 family protein 0 transcriptional factor B3 family protein;(source:Araport11) Ipc15G0013990 AT2G35660.3 FAD/NAD(P)-binding oxidoreductase family protein Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc15G0013980 AT4G33100.1 0 0 protein phosphatase;(source:Araport11) Ipc15G0013970 AT5G26170.1 WRKY DNA-binding protein 50 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 50;(source:Araport11) Ipc15G0013960 AT5G12020.1 17.6 kDa class II heat shock protein 0 17.6 kDa class II heat shock protein;(source:Araport11) Ipc15G0013950 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0013940 AT1G72820.2 0 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0013930 AT5G16100.2 0 0 RWP-RK domain protein;(source:Araport11) Ipc15G0013920 AT5G12040.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein 0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein;(source:Araport11) Ipc15G0013910 AT3G13980.1 0 0 SKI/DACH domain protein;(source:Araport11) Ipc15G0013900 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0013890 AT1G10390.3 0 DRA2 is a homolog of mammalian nucleoporin 98 and a likely component of the nuclear pore complex in Arabidopsis. It positively participates in the control of the hypocotyl elongation response to plant proximity and control of shade induced gene expression. Nucleoporin autopeptidase;(source:Araport11) Ipc15G0013870 AT5G19390.4 Rho GTPase activation protein (RhoGAP) with PH domain Encodes a protein with similarity to REN1, a Rho GTPase activating protein.It is cytoplasmic and plasma membrane associated in interphase, but during mitosis localizes to the CDZ/CDS in a POK-dependent manner. Rho GTPase activation protein (RhoGAP) with PH domain-containing protein;(source:Araport11) Ipc15G0013880 AT2G19390.2 0 0 serine/arginine repetitive matrix protein;(source:Araport11) Ipc15G0013860 AT1G76880.1 Duplicated homeodomain-like superfamily protein DF1 is a putative transcription factor required for the synthesis of seed mucilage polysaccharides. The df1 seeds produce almost 50% less mucilage than wild-type, but show less severe defects than the myb5 and ttg2 mutants. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc15G0013850 AT4G33210.1 F-box family protein Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem. F-box family protein;(source:Araport11) Ipc15G0013840 AT2G26340.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0013830 AT1G02180.1 ferredoxin-related 0 ferredoxin-like protein;(source:Araport11) Ipc15G0013820 AT1G62350.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0013810 AT5G21930.2 P-type ATPase of Arabidopsis 2 P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport P-type ATPase of Arabidopsis 2;(source:Araport11) Ipc15G0013800 AT2G26330.1 Leucine-rich receptor-like protein kinase family protein Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. ER binds to the peptides STOMAGEN and EPF2 which compete for the same binding site. The ER-EFP2 complex activates MAPK signaling that inhibits stomatal development. ER-STOMAGEN does not activate MAPK signaling. Plants harboring loss of function alleles of er are more susceptible to heat stress than wild type. In Arabidopsis and other organisms, overexpression of ER confers thermotolerance via as yet undefined mechanisms. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc15G0013790 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0013780 AT4G33180.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0013770 AT5G20650.1 copper transporter 5 Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis. copper transporter 5;(source:Araport11) Ipc15G0013760 AT5G20650.1 copper transporter 5 Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis. copper transporter 5;(source:Araport11) Ipc15G0013750 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0013740 AT2G26280.3 0 smr (Small MutS Related) domain-containing protein CTC-interacting domain 7;(source:Araport11) Ipc15G0013730 AT5G25500.1 0 0 exosome complex exonuclease;(source:Araport11) Ipc15G0013720 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc15G0013710 AT4G32400.1 Mitochondrial substrate carrier family protein Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0013700 AT2G26280.7 0 smr (Small MutS Related) domain-containing protein CTC-interacting domain 7;(source:Araport11) Ipc15G0013690 AT2G26280.3 0 smr (Small MutS Related) domain-containing protein CTC-interacting domain 7;(source:Araport11) Ipc15G0013680 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0013670 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc15G0013660 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc15G0013650 AT4G32400.1 Mitochondrial substrate carrier family protein Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0013640 AT4G20990.1 alpha carbonic anhydrase 4 0 alpha carbonic anhydrase 4;(source:Araport11) Ipc15G0013630 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0013620 AT1G73325.1 Kunitz family trypsin and protease inhibitor protein 0 Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc15G0013610 AT3G45730.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0013600 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc15G0013590 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc15G0013580 AT5G45280.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc15G0013570 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc15G0013560 AT1G24100.1 UDP-glucosyl transferase 74B1 Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis UDP-glucosyl transferase 74B1;(source:Araport11) Ipc15G0013550 AT3G02580.1 sterol 1 Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype. sterol 1;(source:Araport11) Ipc15G0013540 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0013530 AT5G11200.1 DEAD/DEAH box RNA helicase family protein One of two genes encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions of Arabidopsis nuclei, and associates with genes transcribed by RNA polymerase II independently from the presence of introns. It is not detected at non-transcribed loci. It interacts with ssRNA, dsRNA and dsDNA, but not with ssDNA. Its ATPase activity is stimulated by RNA and dsDNA and its ATP-dependent RNA helicase activity unwinds dsRNA but not dsDNA. DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc15G0013520 AT5G20150.1 SPX domain gene 1 Expression is upregulated in the shoot of cax1/cax3 mutant. Additionally, its expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. The mRNA is cell-to-cell mobile. SPX domain-containing protein 1;(source:Araport11) Ipc15G0013510 AT3G26320.1 cytochrome P450, family 71, subfamily B, polypeptide 36 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 36;(source:Araport11) Ipc15G0013500 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc15G0013490 AT5G24050.1 Domain of unknown function (DUF313) 0 plant-specific B3-DNA-binding domain protein (DUF313);(source:Araport11) Ipc15G0013480 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0013470 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0013460 AT3G15730.1 phospholipase D alpha 1 Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. The mRNA is cell-to-cell mobile. phospholipase D alpha 1;(source:Araport11) Ipc15G0013450 AT4G32330.4 0 WDL5 is an target of EIN3 that co-localizes with cortical microtubles. It its thought to function to stabilize microtubles during ethylene induced hypocotyl elongation. TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc15G0013440 AT2G25170.2 0 Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.The mRNA is cell-to-cell mobile. chromatin remodeling factor CHD3 (PICKLE);(source:Araport11) Ipc15G0013430 AT5G40520.2 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc15G0013420 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc15G0013410 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc15G0013400 AT2G25430.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related AP180 N-terminal homology domain, TPLATE complex protein involved in clathrin-mediated endocytosis. epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein;(source:Araport11) Ipc15G0013390 AT4G32280.1 indole-3-acetic acid inducible 29 0 indole-3-acetic acid inducible 29;(source:Araport11) Ipc15G0013380 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc15G0013370 AT2G14100.1 cytochrome P450, family 705, subfamily A, polypeptide 13 a member of the cytochrome P450 family cytochrome P450, family 705, subfamily A, polypeptide 13;(source:Araport11) Ipc15G0013360 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc15G0013350 AT2G45560.3 0 cytochrome P450 monooxygenase cytochrome P450, family 76, subfamily C, polypeptide 1;(source:Araport11) Ipc15G0013340 AT1G29160.1 Dof-type zinc finger DNA-binding family protein Encodes a DOF transcription factor involved in seed coat development. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc15G0013330 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0013320 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc15G0013310 #N/A #N/A #N/A #N/A Ipc15G0013300 AT4G32270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc15G0013290 AT3G29410.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc15G0013280 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0013270 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc15G0013260 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0013250 AT1G53750.1 regulatory particle triple-A 1A 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, regulatory particle triple-A 1A;(source:Araport11) Ipc15G0013240 AT1G53750.1 regulatory particle triple-A 1A 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, regulatory particle triple-A 1A;(source:Araport11) Ipc15G0013230 AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein threonine synthase Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc15G0013220 AT3G04530.1 phosphoenolpyruvate carboxylase kinase 2 Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light and is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphoenolpyruvate carboxylase kinase 2;(source:Araport11) Ipc15G0013210 AT4G27220.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0013200 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0013190 AT4G27220.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0013180 AT3G54010.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc15G0013170 AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc15G0013160 AT3G29010.6 0 0 Biotin/lipoate A/B protein ligase family;(source:Araport11) Ipc15G0013150 AT3G19180.1 paralog of ARC6 Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division. plastid division protein;(source:Araport11) Ipc15G0013140 AT5G11160.1 adenine phosphoribosyltransferase 5 0 adenine phosphoribosyltransferase 5;(source:Araport11) Ipc15G0013130 AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc15G0013120 AT5G46070.1 Guanylate-binding family protein 0 Guanylate-binding family protein;(source:Araport11) Ipc15G0013110 AT4G32190.1 Myosin heavy chain-related protein Encodes a plastid-located coiled coil-containing protein that is required for normal starch granule initiation in Arabidopsis chloroplasts. Mutants lacking MRC have fewer starch granules per chloroplast than the wild type. Interacts with PTST2 (At1g27070), which is also required for normal starch granule initiation (DOI:10.1105/tpc.18.00219). Myosin heavy chain-related protein;(source:Araport11) Ipc15G0013100 AT5G11150.1 vesicle-associated membrane protein 713 Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. vesicle-associated membrane protein 713;(source:Araport11) Ipc15G0013090 AT1G52520.1 FAR1-related sequence 6 0 FAR1-related sequence 6;(source:Araport11) Ipc15G0013080 AT1G03970.1 G-box binding factor 4 encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers. G-box binding factor 4;(source:Araport11) Ipc15G0013070 AT2G25320.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc15G0013060 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0013050 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc15G0013040 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0013030 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0013020 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0013010 AT1G08590.1 Leucine-rich receptor-like protein kinase family protein Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc15G0013000 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0012990 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012980 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012970 AT4G33430.1 BRI1-associated receptor kinase Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase;(source:Araport11) Ipc15G0012960 AT5G13890.3 Family of unknown function (DUF716) 0 plant viral-response family protein (DUF716);(source:Araport11) Ipc15G0012950 AT2G46340.2 0 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light. SPA (suppressor of phyA-105) protein family;(source:Araport11) Ipc15G0012940 AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei. Heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc15G0012930 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012920 AT2G25290.4 0 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc15G0012910 AT5G25270.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc15G0012900 AT5G23740.1 ribosomal protein S11-beta Encodes a putative ribosomal protein S11 (RPS11-beta). ribosomal protein S11-beta;(source:Araport11) Ipc15G0012890 AT5G25265.1 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc15G0012880 AT5G24130.1 0 0 polypyrimidine tract-binding-like protein;(source:Araport11) Ipc15G0012870 AT5G35090.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0012860 AT5G11040.1 TRS120 Encodes a tethering factor required for cell plate biogenesis. TRS120;(source:Araport11) Ipc15G0012850 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0012840 AT5G08550.1 GC-rich sequence DNA-binding factor-like protein Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression. GC-rich sequence DNA-binding factor-like protein;(source:Araport11) Ipc15G0012830 AT2G36660.1 poly(A) binding protein 7 polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins. poly(A) binding protein 7;(source:Araport11) Ipc15G0012820 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0012810 AT3G12850.1 COP9 signalosome complex-related / CSN complex-related 0 COP9 signalosome complex-related / CSN complex-like protein;(source:Araport11) Ipc15G0012800 AT2G25220.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0012790 AT5G25190.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0012780 AT5G25170.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc15G0012770 ATMG00520.1 Intron maturase, type II family protein 0 Intron maturase, type II family protein;(source:Araport11) Ipc15G0012760 AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc15G0012750 AT1G10095.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc15G0012740 AT1G73066.1 Leucine-rich repeat family protein 0 Leucine-rich repeat family protein;(source:Araport11) Ipc15G0012720 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012730 AT5G20480.2 0 Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. EF-TU receptor;(source:Araport11) Ipc15G0012710 AT4G39830.4 0 role in the degradation of ascorbate to (mono)dehydroascorbate Cupredoxin superfamily protein;(source:Araport11) Ipc15G0012700 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0012690 AT1G08050.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc15G0012680 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc15G0012670 AT5G47780.1 galacturonosyltransferase 4 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase 4;(source:Araport11) Ipc15G0012660 AT5G59810.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc15G0012650 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0012640 AT4G15950.1 RNA polymerase II, Rpb4, core protein Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V; homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation. RNA polymerase II, Rpb4, core protein;(source:Araport11) Ipc15G0012630 AT5G47800.4 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc15G0012620 AT5G47770.1 farnesyl diphosphate synthase 1 Encodes a protein with farnesyl diphosphate synthase activity. farnesyl diphosphate synthase 1;(source:Araport11) Ipc15G0012610 AT3G50310.1 mitogen-activated protein kinase kinase kinase 20 Encodes a member of MEKK subfamily. Target promoter of the male germline-specific transcription factor DUO1. Involved in osmotic stress response via regulation of MPK6 activity. It also plays an important role in regulating cell division and cell elongation in the primary root meristematic and elongation areas. Mutants show defects in root microtubule organization.It phosphorylates MPK18 and MKK3.It is a positive regulator of ABA-induced stomatal closure that acts by phosphorylating MKK5. mitogen-activated protein kinase kinase kinase 20;(source:Araport11) Ipc15G0012600 AT5G47760.1 2-phosphoglycolate phosphatase 2 serine/threonine protein kinase 2-phosphoglycolate phosphatase 2;(source:Araport11) Ipc15G0012590 AT1G50710.1 0 0 HAUS augmin-like complex subunit;(source:Araport11) Ipc15G0012580 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0012570 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0012560 AT4G16420.1 homolog of yeast ADA2 2B Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations. ADA2 2B;(source:Araport11) Ipc15G0012550 AT5G55600.3 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein 0 Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc15G0012540 AT4G17240.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc15G0012530 AT5G47710.4 0 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc15G0012520 AT4G16390.1 pentatricopeptide (PPR) repeat-containing protein Encodes a pentatricopeptide repeat protein, SVR7 (SUPPRESSOR OF VARIEGATION7), required for FtsH-mediated chloroplast biogenesis. It is involved in accumulation and translation of chloroplast ATP synthase subunits. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc15G0012510 #N/A #N/A #N/A #N/A Ipc15G0012500 AT1G48350.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc15G0012490 AT4G16390.1 pentatricopeptide (PPR) repeat-containing protein Encodes a pentatricopeptide repeat protein, SVR7 (SUPPRESSOR OF VARIEGATION7), required for FtsH-mediated chloroplast biogenesis. It is involved in accumulation and translation of chloroplast ATP synthase subunits. pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc15G0012480 AT4G16410.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0012470 AT4G16440.1 ferredoxin hydrogenases Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing. ferredoxin hydrogenase;(source:Araport11) Ipc15G0012460 AT5G57110.3 0 Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. autoinhibited Ca2+ -ATPase, isoform 8;(source:Araport11) Ipc15G0012440 AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein MTL1 is a mitochondria localized PRR protein involved in mitochondrial protein translation and group II intron splicing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0012450 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc15G0012430 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0012420 AT4G37630.2 cyclin d5;1 core cell cycle genes; a quantitative trait gene for endoreduplication. cyclin d5;(source:Araport11) Ipc15G0012410 AT2G14510.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0000750 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc14G0000740 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0000560 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0000550 AT5G49830.2 exocyst complex component 84B Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. exocyst complex component 84B;(source:Araport11) Ipc07G0000540 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000290 #N/A #N/A #N/A #N/A Ipc03G0000300 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000310 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0000320 AT2G34480.2 0 Encodes a nuclear localized member of the ribosomal L18ae/LX protein family. Loss of function mutations show reduced transmission through the gametophytes and embryo lethality. Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc03G0000330 AT5G53590.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc03G0000340 AT5G23150.3 0 Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function. HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions.The mRNA is cell-to-cell mobile. Tudor/PWWP/MBT domain-containing protein;(source:Araport11) Ipc03G0000350 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc03G0000360 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000370 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000380 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc03G0000390 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0000400 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000410 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0000420 AT3G14110.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0000430 AT5G64030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0000440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000450 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000460 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0005770 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0005780 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc02G0005790 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0005800 AT1G04860.1 ubiquitin-specific protease 2 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 2;(source:Araport11) Ipc02G0005810 AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0005820 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc02G0005830 AT1G07240.1 UDP-glucosyl transferase 71C5 Encodes a UDP-glucosyltransferase that plays a role in abscisic acid (ABA) glucosylation from ABA to ABA-glucose ester and regulates ABA homeostasis, thereby influencing the ABA signal network. UDP-glucosyl transferase 71C5;(source:Araport11) Ipc02G0005840 #N/A #N/A #N/A #N/A Ipc02G0005850 AT2G22480.1 phosphofructokinase 5 0 phosphofructokinase 5;(source:Araport11) Ipc02G0005860 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0005870 AT5G07540.2 glycine-rich protein 16 encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). glycine-rich protein 16;(source:Araport11) Ipc02G0005880 AT4G15640.2 0 0 adenylyl cyclase;(source:Araport11) Ipc02G0005890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0005900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0005910 AT4G12400.1 stress-inducible protein, putative Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. stress-inducible protein;(source:Araport11) Ipc02G0005920 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0005930 AT3G20015.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0005940 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0005950 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0005960 AT5G22410.1 root hair specific 18 0 root hair specific 18;(source:Araport11) Ipc02G0005970 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc02G0005980 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0005990 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006000 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0006010 AT1G48175.4 0 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc02G0006020 AT1G50410.3 0 Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG1. SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0006030 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0006040 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc02G0006050 AT5G27470.1 seryl-tRNA synthetase / serine--tRNA ligase 0 seryl-tRNA synthetase / serine-tRNA ligase;(source:Araport11) Ipc02G0006060 AT1G11112.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006080 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0006090 AT1G10570.3 0 Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc02G0006100 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0006110 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0006120 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0024670 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024680 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc01G0024690 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0024700 AT3G06240.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0024710 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0024720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024730 AT2G39380.1 exocyst subunit exo70 family protein H2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H2;(source:Araport11) Ipc01G0024740 AT2G17950.1 Homeodomain-like superfamily protein Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0024750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024770 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc08G0008820 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc08G0008810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0008800 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0008790 AT5G44700.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0008780 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0008770 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc08G0008760 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0008750 AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein MTL1 is a mitochondria localized PRR protein involved in mitochondrial protein translation and group II intron splicing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0008740 AT5G57990.1 ubiquitin-specific protease 23 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 23;(source:Araport11) Ipc08G0008730 #N/A #N/A #N/A #N/A Ipc08G0008720 #N/A #N/A #N/A #N/A Ipc08G0008710 AT2G43840.1 UDP-glycosyltransferase 74 F1 UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside. UDP-glycosyltransferase 74 F1;(source:Araport11) Ipc08G0008700 AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0008690 AT1G73400.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0008680 AT1G16970.1 KU70 homolog Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. ATP-dependent DNA helicase 2 subunit Ku70-like protein;(source:Araport11) Ipc08G0008670 AT3G45750.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc08G0008660 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc08G0008650 AT1G25250.3 0 Encodes a transcription factor that, together with IDD14 and IDD15, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses . IDD16 also binds to the SPCH promoter and regulates stomata initiation. indeterminate(ID)-domain 16;(source:Araport11) Ipc08G0008640 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc08G0008620 AT5G22130.1 mannosyltransferase family protein member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc08G0008630 AT2G03140.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0008610 AT5G49360.1 beta-xylosidase 1 Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. beta-xylosidase 1;(source:Araport11) Ipc08G0008600 AT1G12244.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0008590 AT1G06110.1 SKP1/ASK-interacting protein 16 0 SKP1/ASK-interacting protein 16;(source:Araport11) Ipc08G0008580 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0008570 AT1G76680.2 12-oxophytodienoate reductase 1 Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1;(source:Araport11) Ipc08G0008560 AT1G06130.2 glyoxalase 2-4 0 glyoxalase 2-4;(source:Araport11) Ipc08G0008550 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0008540 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0008530 AT1G08450.1 calreticulin 3 Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. calreticulin 3;(source:Araport11) Ipc08G0008520 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc08G0008510 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0008500 AT1G76710.2 SET domain group 26 0 SET domain group 26;(source:Araport11) Ipc08G0008490 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0008480 AT3G11690.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0008470 AT4G39500.2 0 0 cytochrome P450, family 96, subfamily A, polypeptide 11;(source:Araport11) Ipc08G0008460 AT3G45560.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc08G0008450 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0008440 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc08G0008430 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc08G0008420 AT5G04200.1 metacaspase 9 Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a–f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. metacaspase 9;(source:Araport11) Ipc08G0008410 AT1G08350.4 0 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc08G0008400 AT3G07750.2 3'-5'-exoribonuclease family protein 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc08G0008390 AT2G32980.1 0 0 HAUS augmin-like complex subunit;(source:Araport11) Ipc08G0008380 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0008370 AT5G18700.1 Protein kinase family protein with ARM repeat domain Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis. kinase family with ARM repeat domain-containing protein;(source:Araport11) Ipc08G0008360 AT2G27270.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0008350 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0008340 AT3G05380.3 DIRP ;Myb-like DNA-binding domain 0 ALWAYS EARLY 2;(source:Araport11) Ipc08G0008330 AT3G10430.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0008320 AT1G14220.1 Ribonuclease T2 family protein 0 Ribonuclease T2 family protein;(source:Araport11) Ipc08G0008310 AT3G09550.3 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0008300 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0008290 AT2G43500.9 0 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc08G0008280 AT5G40520.2 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc08G0008270 AT1G54870.1 NAD(P)-binding Rossmann-fold superfamily protein ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0008260 AT5G06020.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc08G0008250 AT3G06070.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0008240 AT2G06925.1 Phospholipase A2 family protein Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine. Phospholipase A2 family protein;(source:Araport11) Ipc08G0008230 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc08G0008220 AT1G25500.2 Plasma-membrane choline transporter family protein 0 Plasma-membrane choline transporter family protein;(source:Araport11) Ipc08G0008210 AT3G61830.1 auxin response factor 18 0 auxin response factor 18;(source:Araport11) Ipc08G0008200 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0008190 AT1G68650.1 Uncharacterized protein family (UPF0016) 0 Uncharacterized protein family (UPF0016);(source:Araport11) Ipc08G0008180 AT4G27910.1 SET domain protein 16 Encodes a SET domain containing protein, putative H3K4 methyltransferase. SET domain protein 16;(source:Araport11) Ipc08G0008170 AT1G08720.2 0 enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearumThe mRNA is cell-to-cell mobile. Protein kinase superfamily protein;(source:Araport11) Ipc08G0008160 AT3G05345.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc08G0008150 AT5G56750.1 N-MYC downregulated-like 1 0 N-MYC downregulated-like 1;(source:Araport11) Ipc08G0008140 AT1G25550.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc08G0008130 AT1G13260.1 related to ABI3/VP1 1 Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator. The mRNA is cell-to-cell mobile. related to ABI3/VP1 1;(source:Araport11) Ipc08G0008120 AT1G13250.1 galacturonosyltransferase-like 3 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 3;(source:Araport11) Ipc08G0008110 AT2G33240.5 0 member of Myosin-like proteins myosin XI D;(source:Araport11) Ipc08G0008100 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0008090 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0008080 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc08G0008070 AT1G68830.1 STT7 homolog STN7 STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation. STN7 is involved in state transitions. Serine/Threonine kinase domain protein;(source:Araport11) Ipc08G0008060 AT5G64410.1 oligopeptide transporter 4 oligopeptide transporter oligopeptide transporter 4;(source:Araport11) Ipc08G0008050 AT1G13245.1 ROTUNDIFOLIA like 17 0 ROTUNDIFOLIA like 17;(source:Araport11) Ipc08G0008040 AT5G41820.2 0 0 RAB geranylgeranyl transferase alpha subunit 2;(source:Araport11) Ipc08G0008030 AT1G61130.1 serine carboxypeptidase-like 32 0 serine carboxypeptidase-like 32;(source:Araport11) Ipc08G0008020 AT1G77230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0008010 AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc08G0008000 AT5G50400.1 purple acid phosphatase 27 0 purple acid phosphatase 27;(source:Araport11) Ipc08G0007990 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0007980 AT4G20050.4 0 Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0007970 AT1G52310.1 protein kinase family protein / C-type lectin domain-containing protein 0 protein kinase family protein / C-type lectin domain-containing protein;(source:Araport11) Ipc08G0007960 AT3G07530.3 0 0 integrator complex subunit;(source:Araport11) Ipc08G0007950 AT3G07530.3 0 0 integrator complex subunit;(source:Araport11) Ipc08G0007940 AT3G07530.2 0 0 integrator complex subunit;(source:Araport11) Ipc04G0019490 AT3G54270.1 sucrose-6F-phosphate phosphohydrolase family protein 0 sucrose-6F-phosphate phosphohydrolase family protein;(source:Araport11) Ipc04G0019500 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0019510 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc04G0019520 AT4G15550.1 indole-3-acetate beta-D-glucosyltransferase UDP-glucose:indole-3-acetate beta-D-glucosyltransferase indole-3-acetate beta-D-glucosyltransferase;(source:Araport11) Ipc04G0019530 AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 15 xyloglucan endotransglycosylase-related protein (XTR7) xyloglucan endotransglucosylase/hydrolase 15;(source:Araport11) Ipc04G0019540 AT4G31780.2 monogalactosyl diacylglycerol synthase 1 Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. monogalactosyl diacylglycerol synthase 1;(source:Araport11) Ipc04G0019550 AT4G14200.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0019560 AT2G43945.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0019570 AT5G09260.1 vacuolar protein sorting-associated protein 20.2 0 vacuolar protein sorting-associated protein 20.2;(source:Araport11) Ipc04G0019580 AT3G49410.3 0 0 Transcription factor IIIC, subunit 5;(source:Araport11) Ipc04G0019590 AT2G43940.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0019600 AT2G31820.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0019610 AT3G09710.2 IQ-domain 1 Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue. IQ-domain 1;(source:Araport11) Ipc04G0019620 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc04G0019630 AT5G16715.1 ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases 0 protein EMBRYO DEFECTIVE 2247;(source:Araport11) Ipc04G0019640 AT2G43880.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0019650 AT3G59850.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0019660 AT5G16970.1 alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls alkenal reductase;(source:Araport11) Ipc04G0019670 AT4G14140.2 DNA methyltransferase 2 This gene is predicted to encode a DNA methyltransferase. A plant line expressing an RNAi construct directed against DMT2 has reduced agrobacterium-mediated tumor formation. DNA methyltransferase 2;(source:Araport11) Ipc04G0019680 AT5G16970.1 alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls alkenal reductase;(source:Araport11) Ipc04G0019690 AT5G16990.1 Zinc-binding dehydrogenase family protein molecular function has not been defined, was shown involved in oxidative stress tolerance. The mRNA is cell-to-cell mobile. Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc04G0019700 AT5G16970.1 alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls alkenal reductase;(source:Araport11) Ipc04G0019710 AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein 0 ACT domain-containing small subunit of acetolactate synthase protein;(source:Araport11) Ipc04G0019720 AT3G59820.4 0 0 LETM1-like protein;(source:Araport11) Ipc04G0019730 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc04G0019740 AT2G31790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0019750 AT1G24100.1 UDP-glucosyl transferase 74B1 Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis UDP-glucosyl transferase 74B1;(source:Araport11) Ipc04G0019760 AT1G05690.1 BTB and TAZ domain protein 3 BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. BTB and TAZ domain protein 3;(source:Araport11) Ipc04G0019770 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc04G0019780 AT3G59800.1 0 0 stress response protein;(source:Araport11) Ipc04G0019790 AT3G59780.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc04G0019800 AT2G43770.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0019810 AT1G74480.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc04G0019820 #N/A #N/A #N/A #N/A Ipc04G0019830 AT1G23820.1 spermidine synthase 1 Spermidine synthase. spermidine synthase;(source:Araport11) Ipc04G0019840 AT2G43780.3 0 0 cytochrome oxidase assembly protein;(source:Araport11) Ipc04G0019850 AT1G05730.1 Eukaryotic protein of unknown function (DUF842) 0 FAM136A-like protein (DUF842);(source:Araport11) Ipc04G0019860 AT3G22480.2 prefoldin 2 0 prefoldin 2;(source:Araport11) Ipc04G0019870 AT3G59690.2 0 0 IQ-domain 13;(source:Araport11) Ipc04G0019880 AT3G59670.1 0 0 elongation factor;(source:Araport11) Ipc04G0019890 AT3G21750.1 UDP-glucosyl transferase 71B1 Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro UDP-glucosyl transferase 71B1;(source:Araport11) Ipc04G0019900 AT2G29730.1 UDP-glucosyl transferase 71D1 0 UDP-glucosyl transferase 71D1;(source:Araport11) Ipc04G0019910 AT3G21790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0019920 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0019930 AT3G21750.1 UDP-glucosyl transferase 71B1 Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro UDP-glucosyl transferase 71B1;(source:Araport11) Ipc04G0019940 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0019950 AT3G21760.1 UDP-Glycosyltransferase superfamily protein Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0019960 AT2G02960.6 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0019970 AT1G73180.1 Eukaryotic translation initiation factor eIF2A family protein 0 Eukaryotic translation initiation factor eIF2A family protein;(source:Araport11) Ipc04G0019980 AT2G43650.1 Sas10/U3 ribonucleoprotein (Utp) family protein SAS10/C1D family protein. Loss of function mutants are embryo lethal.Ubiquitously expressed, with preference for tissues undergoing rapid cellular growth and differentiation. Sas10/U3 ribonucleoprotein (Utp) family protein;(source:Araport11) Ipc04G0019990 AT3G52050.2 5'-3' exonuclease family protein 0 5-3 exonuclease family protein;(source:Araport11) Ipc04G0020000 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc04G0020010 AT3G59670.1 0 0 elongation factor;(source:Araport11) Ipc04G0020020 AT2G30710.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc04G0020030 AT2G30700.1 0 0 GPI-anchored protein;(source:Araport11) Ipc04G0020040 AT2G43490.8 0 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc04G0020050 AT3G07565.1 Protein of unknown function (DUF3755) 0 histone H2A deubiquitinase (DUF3755);(source:Araport11) Ipc04G0020060 AT2G32980.1 0 0 HAUS augmin-like complex subunit;(source:Araport11) Ipc04G0020070 AT1G71230.1 COP9-signalosome 5B Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses. COP9-signalosome 5B;(source:Araport11) Ipc04G0020080 AT3G07568.1 0 0 fanconi anemia group D2 protein;(source:Araport11) Ipc04G0020090 AT3G03320.1 RNA-binding ASCH domain protein 0 RNA-binding ASCH domain protein;(source:Araport11) Ipc04G0020100 AT3G59540.1 Ribosomal L38e protein family 0 Ribosomal L38e protein family;(source:Araport11) Ipc04G0020110 AT1G08760.1 Plant protein of unknown function (DUF936) CORD2 is a member of a novel and plant specific family of microtubule associated proteins. CORD1 binds microtubules via a conserved protein domain shared among family members. CORD functions may overlap;cord1 / cord2 mutants have defects in secondary cell wall pit morphology. GPI-anchored adhesin-like protein, putative (DUF936);(source:Araport11) Ipc04G0020120 AT1G08450.1 calreticulin 3 Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. calreticulin 3;(source:Araport11) Ipc04G0020130 AT1G48200.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0020140 AT2G43420.1 3-beta hydroxysteroid dehydrogenase/isomerase family protein 0 3-beta hydroxysteroid dehydrogenase/isomerase family protein;(source:Araport11) Ipc04G0020150 AT2G43410.4 RNA binding FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing. RNA binding protein;(source:Araport11) Ipc04G0020160 #N/A #N/A #N/A #N/A Ipc04G0020170 AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc04G0020180 AT2G43400.1 electron-transfer flavoprotein:ubiquinone oxidoreductase Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods. electron-transfer flavoprotein:ubiquinone oxidoreductase;(source:Araport11) Ipc04G0020190 AT3G59530.3 0 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc04G0020200 AT1G06050.1 Protein of unknown function (DUF1336) 0 ENHANCED DISEASE RESISTANCE-like protein (DUF1336);(source:Araport11) Ipc04G0020210 AT4G12650.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc04G0020220 AT4G12650.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc04G0020230 AT4G12650.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc04G0020240 AT3G59520.1 RHOMBOID-like protein 13 0 RHOMBOID-like protein 13;(source:Araport11) Ipc04G0020250 AT5G51000.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc04G0020260 AT3G21790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0020270 AT2G31380.1 salt tolerance homologue a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction. salt tolerance homologue;(source:Araport11) Ipc04G0020280 AT3G59490.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0020290 AT3G59480.1 pfkB-like carbohydrate kinase family protein Encodes a member of the fructokinase gene family. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc04G0020300 AT5G28840.2 GDP-D-mannose 3',5'-epimerase Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose. GDP-D-mannose 3,5-epimerase;(source:Araport11) Ipc04G0020320 AT2G31660.1 ARM repeat superfamily protein SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes). Regulates microRNA activity. ARM repeat superfamily protein;(source:Araport11) Ipc04G0020310 AT3G06880.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0020330 AT3G59020.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0020340 #N/A #N/A #N/A #N/A Ipc04G0020350 AT5G37370.7 0 encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt. PRP38 family protein;(source:Araport11) Ipc04G0020360 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc04G0020370 AT1G65810.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0020380 AT1G65810.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0020390 AT5G08400.2 Protein of unknown function (DUF3531) 0 structural maintenance of chromosomes-like protein, putative (DUF3531);(source:Araport11) Ipc04G0020400 AT3G20320.1 trigalactosyldiacylglycerol2 Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. trigalactosyldiacylglycerol2;(source:Araport11) Ipc04G0020410 AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0020420 AT2G43290.1 Calcium-binding EF-hand family protein Calmodulin-like MSS3.Encodes an endomembrane localized member of the CML subfamily VII. Contains a canonical CaM domain and unique N-terminal extension that distinguishes it from other members of the subfamily. Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0020430 AT1G09340.1 chloroplast RNA binding Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes. The mRNA is cell-to-cell mobile. chloroplast RNA binding protein;(source:Araport11) Ipc04G0020440 AT1G09330.1 0 0 golgi apparatus membrane protein-like protein ECHIDNA protein;(source:Araport11) Ipc04G0020450 AT1G51460.1 ABC-2 type transporter family protein ABCG13 encodes a member of the ATP-binding cassette (ABC) transporter family protein. Mutants show defects in petal elongation resulting in a folded petal phenotype. ABC-2 type transporter family protein;(source:Araport11) Ipc04G0020460 AT3G59430.5 0 0 hypothetical protein;(source:Araport11) Ipc04G0020470 AT3G59420.1 crinkly4 Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. ACR4 phosphorylates the PROTEIN PHOSPHATASE 2A-3 (PP2A-3) catalytic subunit of the PP2A phosphatase holoenzyme and PP2A crinkly4;(source:Araport11) Ipc04G0020480 AT3G59400.1 enzyme binding;tetrapyrrole binding GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis. protein GENOMES UNCOUPLED 4;(source:Araport11) Ipc04G0020490 AT4G15000.1 Ribosomal L27e protein family 0 Ribosomal L27e protein family;(source:Araport11) Ipc04G0020500 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc04G0020510 AT2G43310.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc04G0020520 AT1G05950.5 0 0 hypothetical protein;(source:Araport11) Ipc04G0020530 AT3G20330.2 0 encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis PYRIMIDINE B;(source:Araport11) Ipc04G0020540 AT4G26850.1 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light. GDP-L-galactose phosphorylase 1;(source:Araport11) Ipc04G0020550 AT1G50650.1 Stigma-specific Stig1 family protein KRS is a member of the STIG1 family of peptides. Its expression in embryos appears to be dependent upon ZOU.Loss of function results in a reduction of α-JIM12 labelled 'sheath' around the developing embryo. Stigma-specific Stig1 family protein;(source:Araport11) Ipc04G0020560 AT3G11710.1 lysyl-tRNA synthetase 1 0 lysyl-tRNA synthetase 1;(source:Araport11) Ipc04G0020570 AT2G31510.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc04G0020580 AT5G08280.1 hydroxymethylbilane synthase Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants. It has been shown to interact with the PPR protein AtECB2 for chloroplast RNA editing. hydroxymethylbilane synthase;(source:Araport11) Ipc04G0020590 AT2G43360.1 Radical SAM superfamily protein Catalyzes the conversion of dethiobiotin to biotin. Radical SAM superfamily protein;(source:Araport11) Ipc04G0020600 AT1G05870.9 0 0 hypothetical protein (DUF1685);(source:Araport11) Ipc04G0020610 AT2G43320.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0020620 AT2G43370.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0020630 AT2G43250.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0020640 AT3G59350.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0020650 AT2G43160.4 ENTH/VHS family protein 0 ENTH/VHS family protein;(source:Araport11) Ipc04G0020660 AT4G08910.1 0 0 homeobox protein;(source:Araport11) Ipc04G0020670 AT5G07280.1 Leucine-rich repeat transmembrane protein kinase Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc04G0020680 AT1G48360.2 zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides Encodes a FAN1 homolog that is involved in interstrand crosslink repair. FAN1 appears to act in in a different pathway from MUS81 but in similar pathway with RECQ4A, RAD5A and MFH1. zinc ion binding/nucleic acid binding/hydrolase;(source:Araport11) Ipc04G0020690 AT1G05840.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0020700 AT1G10840.1 translation initiation factor 3 subunit H1 Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1). translation initiation factor 3 subunit H1;(source:Araport11) Ipc04G0020710 AT2G31660.1 ARM repeat superfamily protein SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes). Regulates microRNA activity. ARM repeat superfamily protein;(source:Araport11) Ipc04G0020720 AT1G16970.1 KU70 homolog Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. ATP-dependent DNA helicase 2 subunit Ku70-like protein;(source:Araport11) Ipc04G0020730 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0020740 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0020750 AT1G05820.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 5 0 SIGNAL PEPTIDE PEPTIDASE-LIKE 5;(source:Araport11) Ipc04G0020760 AT2G44820.2 0 0 axoneme-associated protein MST101(2) protein;(source:Araport11) Ipc04G0020770 AT2G43110.1 0 0 U3 containing 90S pre-ribosomal complex subunit;(source:Araport11) Ipc04G0020780 AT2G31680.1 RAB GTPase homolog A5D 0 RAB GTPase homolog A5D;(source:Araport11) Ipc04G0020790 AT5G41770.1 crooked neck protein, putative / cell cycle protein, putative 0 crooked neck protein, putative / cell cycle protein;(source:Araport11) Ipc04G0020800 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc04G0020810 AT3G23670.2 phragmoplast-associated kinesin-related protein, putative Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. phragmoplast-associated kinesin-related protein;(source:Araport11) Ipc04G0020820 AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0020830 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc04G0020840 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc04G0020850 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc04G0020860 AT1G04770.1 Tetratricopeptide repeat (TPR)-like superfamily protein SDI2 is a member of a small family of TPR proteins in Arabidopsis. Like SDI1 it is induced by low sulfer and appears to play a role in negative regulation of glucosinolate biosynthesis. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0020870 AT3G07030.3 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc04G0020880 AT3G24190.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0020890 AT3G01180.1 starch synthase 2 0 starch synthase 2;(source:Araport11) Ipc04G0020900 AT5G22500.1 fatty acid reductase 1 Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue. fatty acid reductase 1;(source:Araport11) Ipc04G0020910 AT3G25550.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0020920 AT5G17000.2 0 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc04G0020930 AT1G21610.2 wound-responsive family protein 0 wound-responsive family protein;(source:Araport11) Ipc04G0020940 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0020950 AT1G05840.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0020960 AT1G04780.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0020970 AT3G24200.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc04G0020980 AT5G66430.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0020990 AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0021000 AT2G24830.1 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein 0 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein;(source:Araport11) Ipc04G0021010 AT5G13930.1 Chalcone and stilbene synthase family protein Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. The mRNA is cell-to-cell mobile. Chalcone and stilbene synthase family protein;(source:Araport11) Ipc04G0021020 AT3G23940.1 dehydratase family Encodes a member of the dihydroxyacid dehydrates family of proteins that encode enzymes involved in branched chain amino acid biosynthesis. Loss of function mutations have significantly reduced transmission and fertility due to defects in male and female gametophyte development and embryo lethality. Mutants have increased sensitivity to abiotic stressors which may be partially compensated by addition of amino acids to the growth medium. dehydratase family;(source:Araport11) Ipc04G0021030 AT1G04790.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0021040 AT1G30570.1 hercules receptor kinase 2 Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 2;(source:Araport11) Ipc04G0021050 AT4G38130.1 histone deacetylase 1 Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation. HDA19 acts in a WOX5 mediated pathway to maintain columella stem cell fate by repressing CDF4. histone deacetylase 1;(source:Araport11) Ipc04G0021060 AT4G13710.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0021070 AT4G10320.1 tRNA synthetase class I (I, L, M and V) family protein 0 tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11) Ipc04G0021080 AT3G24060.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc04G0021090 AT4G13590.1 Uncharacterized protein family (UPF0016) Chloroplast manganese transporter required for chloroplast manganese homeostasis and photosynthetic function. Uncharacterized protein family (UPF0016);(source:Araport11) Ipc04G0021100 AT3G23990.1 heat shock protein 60 mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60;(source:Araport11) Ipc04G0021110 AT2G33220.1 GRIM-19 protein 0 GRIM-19 protein;(source:Araport11) Ipc04G0021120 AT4G24210.1 F-box family protein F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins. F-box family protein;(source:Araport11) Ipc04G0021130 AT3G23980.1 BLISTER Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation. BLISTER;(source:Araport11) Ipc04G0021140 AT5G42670.1 Agenet domain-containing protein 0 Agenet domain-containing protein;(source:Araport11) Ipc04G0021150 AT5G08780.1 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc04G0021160 AT1G04620.1 coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family Encodes a 7-hydroxymethyl chlorophyll a reductase, an enzyme of the chlorophyll cycle that converts 7-hydroxymethyl chlorophyll a to chlorophyll a. coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family;(source:Araport11) Ipc04G0021170 AT1G03560.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0021180 AT1G04610.1 YUCCA 3 0 YUCCA 3;(source:Araport11) Ipc04G0021190 AT5G43900.3 myosin 2 Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2;(source:Araport11) Ipc04G0021200 AT4G13540.1 0 ADR is a peroxisome localized, myristoylated protein. It is expressed in flowers and plays a role in suppressing ROS accumulation in anthers. Overexpression results in reduced ROS, lower levels of NST1 and NST2 and, consequently alterations in lignification of the anther endothecium resulting in male sterility. golgin family A protein;(source:Araport11) Ipc04G0021210 AT3G23920.1 beta-amylase 1 Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.Activity of BAM1 increases 4 days after osmotic stress. BAM1 has a higher temperature optimum than BAM3 (PMID:25293962). beta-amylase 1;(source:Araport11) Ipc04G0021220 AT2G33280.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0021230 AT1G69280.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0021240 AT1G13750.1 Purple acid phosphatases superfamily protein Encodes a purple acid phosphatase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc04G0021250 AT3G21750.1 UDP-glucosyl transferase 71B1 Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro UDP-glucosyl transferase 71B1;(source:Araport11) Ipc04G0021260 AT1G13750.1 Purple acid phosphatases superfamily protein Encodes a purple acid phosphatase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc04G0021270 AT4G24830.1 arginosuccinate synthase family 0 arginosuccinate synthase family;(source:Araport11) Ipc04G0021280 AT1G14550.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc04G0021290 AT1G10380.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc04G0021300 AT1G13770.1 Protein of unknown function, DUF647 0 root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11) Ipc04G0021310 AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0021320 AT1G18650.1 plasmodesmata callose-binding protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 3;(source:Araport11) Ipc04G0021330 AT1G26460.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0021340 AT3G22345.1 0 0 F-box/kelch-repeat protein;(source:Araport11) Ipc04G0021350 AT1G26480.1 general regulatory factor 12 14-3-3 protein GF14iota (grf12) general regulatory factor 12;(source:Araport11) Ipc04G0021360 AT1G26500.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0021370 AT1G13860.5 0 Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. QUASIMODO2 LIKE 1;(source:Araport11) Ipc04G0021380 AT1G26560.1 beta glucosidase 40 0 beta glucosidase 40;(source:Araport11) Ipc04G0021390 AT1G26560.1 beta glucosidase 40 0 beta glucosidase 40;(source:Araport11) Ipc04G0021400 AT1G26560.1 beta glucosidase 40 0 beta glucosidase 40;(source:Araport11) Ipc04G0021410 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc04G0021420 AT1G69310.4 0 Encodes WRKY57, a member of the WRKY Transcription Factor. Activation of WRKY57 confers drought tolerance. WRKY DNA-binding protein 57;(source:Araport11) Ipc04G0021430 AT1G13900.1 Purple acid phosphatases superfamily protein Encodes a dual-localized acid phosphatase (mitochondria and chloroplast) that modulates carbon metabolism. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc04G0021440 AT5G61240.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0021450 AT5G61280.2 0 0 Remorin family protein;(source:Araport11) Ipc04G0021460 AT1G69330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0021480 #N/A #N/A #N/A #N/A Ipc04G0021470 AT2G03440.1 nodulin-related protein 1 Induced at the transcriptional level by Pseudomonas syringae pv. tomato infection. nodulin-related protein 1;(source:Araport11) Ipc04G0021490 AT2G03430.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0021500 AT1G69340.2 0 0 appr-1-p processing enzyme family protein;(source:Araport11) Ipc04G0021510 AT1G69360.1 Plant protein of unknown function (DUF863) 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc04G0021520 AT1G69390.1 homologue of bacterial MinE 1 Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery. homologue of bacterial MinE 1;(source:Araport11) Ipc04G0021530 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc04G0021540 AT1G26640.1 Amino acid kinase family protein Encodes a cytosolic isopentenyl phosphate kinase that plays an important role in regulating the formation of both MVA (mevalonic acid) and MEP (methylerythritol phosphate) pathway-derived terpenoid compounds by controlling the ratio of IP/DMAP to IPP/DMAPP. IPP and DMAPP are the universal C5 building blocks of all natural terpenoids. IPK enhances terpenoid formation by returning IP/DMAP to the terpenoid biosynthetic network. Amino acid kinase family protein;(source:Araport11) Ipc04G0021550 AT3G29180.3 0 0 DUF1336 family protein (DUF1336);(source:Araport11) Ipc04G0021560 AT1G69420.2 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc04G0021570 AT1G29150.2 0 specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.The mRNA is cell-to-cell mobile. non-ATPase subunit 9;(source:Araport11) Ipc04G0021580 AT1G14000.1 VH1-interacting kinase Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. The mRNA is cell-to-cell mobile. VH1-interacting kinase;(source:Araport11) Ipc04G0021590 AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc04G0021600 AT1G26740.1 Ribosomal L32p protein family 0 Ribosomal L32p protein family;(source:Araport11) Ipc04G0021610 AT1G26750.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0021620 AT1G14140.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc04G0021630 AT1G69490.1 NAC-like, activated by AP3/PI Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. The mRNA is cell-to-cell mobile. NAC-like, activated by AP3/PI;(source:Araport11) Ipc04G0021640 AT1G14150.1 PsbQ-like 2 Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen. PsbQ-like 2;(source:Araport11) Ipc04G0021650 AT5G15290.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0021660 AT5G15270.3 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc04G0021670 AT1G69530.2 expansin A1 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A1;(source:Araport11) Ipc04G0021680 AT1G18750.4 0 Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth. AGAMOUS-like 65;(source:Araport11) Ipc04G0021690 AT5G39660.3 0 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 2;(source:Araport11) Ipc04G0021700 AT5G42540.1 exoribonuclease 2 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. exoribonuclease 2;(source:Araport11) Ipc04G0021710 AT1G69580.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0021720 AT1G26800.1 RING/U-box superfamily protein MPSR1 is cytoplasmic E3 ligase that senses misfolded proteins independently of chaperones and targets those proteins for degradation via the 26S proteasome. RING/U-box superfamily protein;(source:Araport11) Ipc04G0021730 AT1G26810.2 0 Encodes a protein with β1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins. galactosyltransferase1;(source:Araport11) Ipc04G0021740 AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a chloroplast RNA editing factor. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0021750 AT2G02990.1 ribonuclease 1 Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. ribonuclease 1;(source:Araport11) Ipc04G0021760 AT3G60410.3 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc04G0021770 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc04G0021780 AT2G02960.6 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0021790 AT1G69600.1 zinc finger homeodomain 1 Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid. zinc finger homeodomain 1;(source:Araport11) Ipc04G0021800 AT5G39785.5 0 0 hypothetical protein (DUF1666);(source:Araport11) Ipc04G0021810 AT1G26880.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc04G0021820 AT1G14270.1 CAAX amino terminal protease family protein 0 CAAX amino terminal protease family protein;(source:Araport11) Ipc04G0021830 AT1G26850.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0021840 AT2G02950.1 phytochrome kinase substrate 1 Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. phytochrome kinase substrate 1;(source:Araport11) Ipc04G0021850 AT1G14290.1 sphingoid base hydroxylase 2 Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. sphingoid base hydroxylase 2;(source:Araport11) Ipc04G0021860 AT1G26840.1 origin recognition complex protein 6 Origin Recognition Complex subunit 6. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. It acts downstream of BRP4, and is, at least in part, involved in the BRP4-mediated mitotic cell-cycle progression. origin recognition complex protein 6;(source:Araport11) Ipc04G0021870 AT2G23670.1 homolog of Synechocystis YCF37 0 homolog of Synechocystis YCF37;(source:Araport11) Ipc04G0021880 AT2G46420.3 0 0 helicase with zinc finger protein;(source:Araport11) Ipc04G0021890 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0021900 AT2G02880.1 mucin-related 0 mucin-like protein;(source:Araport11) Ipc04G0021910 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc04G0021920 AT4G31110.2 0 0 Wall-associated kinase family protein;(source:Araport11) Ipc04G0021930 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0021940 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0021950 AT1G69760.1 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc04G0021960 AT4G35140.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0021970 AT1G20330.1 sterol methyltransferase 2 Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression. sterol methyltransferase 2;(source:Araport11) Ipc04G0021980 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0021990 AT1G31830.2 Amino acid permease family protein Encodes POLYAMINE UPTAKE TRANSPORTER 2, an amino acid permease family protein. Amino acid permease family protein;(source:Araport11) Ipc04G0022000 AT4G38510.4 ATPase, V1 complex, subunit B protein One of three genes encoding the vacuolar ATP synthase subunit B1. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro. ATPase, V1 complex, subunit B protein;(source:Araport11) Ipc04G0022010 AT3G04870.4 0 Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene. zeta-carotene desaturase;(source:Araport11) Ipc04G0022020 AT4G38520.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0022030 AT2G16940.1 Splicing factor, CC1-like 0 Splicing factor, CC1-like protein;(source:Araport11) Ipc04G0022040 AT1G20200.1 PAM domain (PCI/PINT associated module) protein 0 PAM domain (PCI/PINT associated module) protein;(source:Araport11) Ipc04G0022050 AT2G20940.2 0 0 transmembrane protein, putative (DUF1279);(source:Araport11) Ipc04G0022060 AT2G16910.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop helix transcription factor involved in tapetal cell development, that directly regulates MGT5 expression in tapetum cells. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0022070 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc04G0022080 AT1G68010.1 hydroxypyruvate reductase Encodes hydroxypyruvate reductase. hydroxypyruvate reductase;(source:Araport11) Ipc04G0022090 AT2G16800.1 high-affinity nickel-transport family protein 0 high-affinity nickel-transport family protein;(source:Araport11) Ipc04G0022100 AT1G68000.1 phosphatidylinositol synthase 1 phosphatidylinositol synthase 1 phosphatidylinositol synthase 1;(source:Araport11) Ipc04G0022110 AT4G35070.2 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc04G0022120 AT4G38580.2 0 putative farnesylated protein (At4g38580) mRNA, complete farnesylated protein 6;(source:Araport11) Ipc04G0022130 AT2G20980.1 minichromosome maintenance 10 Similar to MCM10, which in other organism was shown to be involved in the initiation of DNA replication. minichromosome maintenance 10;(source:Araport11) Ipc04G0022140 AT2G16730.1 glycosyl hydrolase family 35 protein putative beta-galactosidase (BGAL13 gene) glycosyl hydrolase family 35 protein;(source:Araport11) Ipc04G0022150 AT4G38620.1 myb domain protein 4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile. myb domain protein 4;(source:Araport11) Ipc04G0022160 AT5G66140.1 proteasome alpha subunit D2 Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. proteasome alpha subunit D2;(source:Araport11) Ipc04G0022170 AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0022180 AT1G75810.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0022190 AT2G16700.1 actin depolymerizing factor 5 Encodes actin depolymerizing factor 5 (ADF5). actin depolymerizing factor 5;(source:Araport11) Ipc04G0022200 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc04G0022210 AT3G03620.2 0 0 MATE efflux family protein;(source:Araport11) Ipc04G0022220 AT5G17700.2 0 0 MATE efflux family protein;(source:Araport11) Ipc04G0022230 AT3G03620.2 0 0 MATE efflux family protein;(source:Araport11) Ipc04G0022240 AT5G52240.1 membrane steroid binding protein 1 Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. The mRNA is cell-to-cell mobile. membrane steroid binding protein 1;(source:Araport11) Ipc04G0022250 AT4G08690.3 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc04G0022260 AT1G69560.1 myb domain protein 105 Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780). myb domain protein 105;(source:Araport11) Ipc04G0022270 AT2G29620.4 0 0 dentin sialophosphoprotein;(source:Araport11) Ipc04G0022280 AT5G21090.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0022290 AT1G01020.1 Arv1-like protein 0 ARV1 family protein;(source:Araport11) Ipc04G0022300 AT3G56810.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0022310 AT3G43810.1 calmodulin 7 EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant. calmodulin 7;(source:Araport11) Ipc04G0022320 AT4G24380.1 0 0 dihydrofolate reductase;(source:Araport11) Ipc04G0022330 AT3G56940.1 dicarboxylate diiron protein, putative (Crd1) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. The mRNA is cell-to-cell mobile. dicarboxylate diiron protein, putative (Crd1);(source:Araport11) Ipc04G0022340 AT1G73100.1 SU(VAR)3-9 homolog 3 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein;(source:Araport11) Ipc04G0022350 AT3G05975.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc04G0022360 AT5G03290.1 isocitrate dehydrogenase V Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. The mRNA is cell-to-cell mobile. isocitrate dehydrogenase V;(source:Araport11) Ipc04G0022370 AT1G71840.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc04G0022380 AT1G22800.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0022390 AT1G62640.2 3-ketoacyl-acyl carrier protein synthase III 3-ketoacyl-acyl carrier protein synthase III (KAS III) 3-ketoacyl-acyl carrier protein synthase III;(source:Araport11) Ipc04G0022400 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0022420 AT1G73100.1 SU(VAR)3-9 homolog 3 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein;(source:Araport11) Ipc04G0022410 AT1G73100.1 SU(VAR)3-9 homolog 3 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein;(source:Araport11) Ipc04G0022430 AT2G40370.1 laccase 5 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 5;(source:Araport11) Ipc04G0022440 AT5G53360.3 0 0 TRAF-like superfamily protein;(source:Araport11) Ipc04G0022450 AT3G10190.1 Calcium-binding EF-hand family protein Encodes a protein with sequence similarity to calmodulins. Loss of function mutations have decreased response to chitin elicitors suggesting a role in plant response to fungal pathogens. Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0022460 AT3G56840.1 FAD-dependent oxidoreductase family protein 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc04G0022470 AT5G04060.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0022480 AT2G41370.1 Ankyrin repeat family protein / BTB/POZ domain-containing protein Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. BOP2 is expressed in valve margin. Misexpression in stems causes short internodes and ectopic biosynthesis of lignin. BOP2 activity is antagonistic to BP (At4g08150) and PNY (At5g02030). BOP3 expression is restricted to pedicel axils by BP and PNY. BOP2 promotes KNAT6 (At1g23380) expression. Ankyrin repeat family protein / BTB/POZ domain-containing protein;(source:Araport11) Ipc04G0022490 AT3G10230.1 lycopene cyclase Encodes a protein with lycopene β-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the ε-cyclase which adds only one ring, the β-cyclase introduces a ring at both ends of lycopene to form the bicyclic β-carotene. lycopene cyclase;(source:Araport11) Ipc04G0022500 AT5G14800.1 pyrroline-5- carboxylate (P5C) reductase Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis. pyrroline-5- carboxylate (P5C) reductase;(source:Araport11) Ipc04G0022510 AT1G03290.6 0 0 ELKS/Rab6-interacting/CAST family protein;(source:Araport11) Ipc04G0022520 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc04G0022530 AT3G10250.5 0 0 histidine-tRNA ligase;(source:Araport11) Ipc04G0022540 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc04G0022550 AT3G22250.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0022560 AT4G15280.1 UDP-glucosyl transferase 71B5 0 UDP-glucosyl transferase 71B5;(source:Araport11) Ipc04G0022570 AT5G04140.1 glutamate synthase 1 Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. The mRNA is cell-to-cell mobile. glutamate synthase 1;(source:Araport11) Ipc04G0022580 AT3G12600.2 nudix hydrolase homolog 16 0 nudix hydrolase homolog 16;(source:Araport11) Ipc04G0022590 AT5G03415.1 Transcription factor DP Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. Transcription factor DP;(source:Araport11) Ipc04G0022600 AT3G49710.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0022610 AT5G49520.1 WRKY DNA-binding protein 48 Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense. The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 48;(source:Araport11) Ipc04G0022620 AT3G46100.1 Histidyl-tRNA synthetase 1 histidyl-tRNA synthetase Histidyl-tRNA synthetase 1;(source:Araport11) Ipc04G0022630 AT3G12250.7 0 basic leucine zipper transcription factor involved in the activation of SA-responsive genes. TGACG motif-binding factor 6;(source:Araport11) Ipc04G0022640 AT2G26850.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0022650 AT2G41140.1 CDPK-related kinase 1 Encodes CDPK-related kinase 1 (CRK1). CDPK-related kinase 1;(source:Araport11) Ipc04G0022660 AT5G49390.1 0 0 serine/threonine-protein phosphatase 4 regulatory subunit-like protein;(source:Araport11) Ipc04G0022670 AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes STC8 (salt tolerant callus 8)/bHLH106 (basic helix-loop-helix transcription factor bHLH106). Knockout lines are more sensitive to NaCl, KCl, LiCl, ABA, and low temperatures than the wild-type. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0022680 AT1G73590.1 Auxin efflux carrier family protein Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. Auxin efflux carrier family protein;(source:Araport11) Ipc04G0022690 AT5G05140.1 Transcription elongation factor (TFIIS) family protein 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc04G0022700 AT3G03920.1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein;(source:Araport11) Ipc04G0022710 AT5G12250.1 beta-6 tubulin Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment. beta-6 tubulin;(source:Araport11) Ipc04G0022720 AT5G06150.1 Cyclin family protein Encodes a cyclin whose expression is reduced in response to high salt. Cyclin family protein;(source:Araport11) Ipc04G0022730 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc04G0022740 AT2G40890.1 cytochrome P450, family 98, subfamily A, polypeptide 3 encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. cytochrome P450, family 98, subfamily A, polypeptide 3;(source:Araport11) Ipc04G0022750 AT1G15780.3 0 0 mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11) Ipc04G0022760 AT4G13870.2 Werner syndrome-like exonuclease Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity. Werner syndrome-like exonuclease;(source:Araport11) Ipc04G0022770 AT3G62700.1 multidrug resistance-associated protein 10 member of MRP subfamily multidrug resistance-associated protein 10;(source:Araport11) Ipc04G0022780 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc04G0022790 AT3G56590.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0022800 AT5G63290.1 Radical SAM superfamily protein CPO3 (At5g63290) has not been characterized per se, but is a homolog of the CPDH/HEMN (see review by Layer et al, 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al, 2010), but not yet from plants. Radical SAM superfamily protein;(source:Araport11) Ipc04G0022810 AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein 0 Nascent polypeptide-associated complex (NAC), alpha subunit family protein;(source:Araport11) Ipc04G0022820 AT2G40830.4 0 Encodes an E3 ubiquitin ligase for the GA-receptor GID1 that functions as a negative regulator of GA signaling in seedlings and seeds by inducing ubiquitin-dependent proteolysis of GID1s. Tyr321 phosphorylation of GARU by TAGK2 inactivates GARU. RING-H2 finger C1A;(source:Araport11) Ipc04G0022830 AT5G04020.2 0 0 calmodulin binding protein;(source:Araport11) Ipc04G0022840 AT2G41430.5 dehydration-induced protein (ERD15) Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2. dehydration-induced protein (ERD15);(source:Araport11) Ipc04G0022850 AT2G41450.1 N-acetyltransferases;N-acetyltransferases 0 N-acetyltransferase;(source:Araport11) Ipc04G0022860 AT3G10150.2 0 0 purple acid phosphatase 16;(source:Araport11) Ipc04G0022870 AT2G41520.3 0 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc04G0022880 AT2G41520.3 0 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc04G0022890 AT3G57290.1 eukaryotic translation initiation factor 3E Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation. eukaryotic translation initiation factor 3E;(source:Araport11) Ipc04G0022900 AT4G20990.1 alpha carbonic anhydrase 4 0 alpha carbonic anhydrase 4;(source:Araport11) Ipc04G0022910 AT2G41530.1 S-formylglutathione hydrolase Encodes a protein with S-formylglutathione hydrolase activity. S-formylglutathione hydrolase;(source:Araport11) Ipc04G0022920 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc04G0022930 AT2G41540.4 0 Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene. 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc04G0022940 AT5G04160.1 Nucleotide-sugar transporter family protein UUAT1 is a UDP-Uronic acid transporter that is localized to the Golgi. It is expressed in the seed coat epidermis and is involved in the development of seed coat mucilage. Nucleotide-sugar transporter family protein;(source:Araport11) Ipc04G0022950 AT3G57330.1 autoinhibited Ca2+-ATPase 11 Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate) autoinhibited Ca2+-ATPase 11;(source:Araport11) Ipc04G0022960 AT2G43870.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0022970 AT5G06839.3 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc04G0022980 AT3G57880.4 0 Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region. Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc04G0022990 AT3G57890.1 Tubulin binding cofactor C domain-containing protein 0 Tubulin binding cofactor C domain-containing protein;(source:Araport11) Ipc04G0023000 AT5G06820.1 STRUBBELIG-receptor family 2 0 STRUBBELIG-receptor family 2;(source:Araport11) Ipc04G0023010 AT3G57910.1 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc04G0023020 AT2G42200.1 squamosa promoter binding protein-like 9 Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expression is regulated by MIR156b. SPL activity nonautonomously inhibits initiation of new leaves at the shoot apical meristem. squamosa promoter binding protein-like 9;(source:Araport11) Ipc04G0023030 AT3G57930.2 0 0 rho GTPase-activating gacO-like protein;(source:Araport11) Ipc04G0023040 AT5G06810.1 Mitochondrial transcription termination factor family protein 0 transcription termination factor family protein;(source:Araport11) Ipc04G0023050 AT2G03450.1 purple acid phosphatase 9 0 purple acid phosphatase 9;(source:Araport11) Ipc04G0023060 AT5G06760.1 Late Embryogenesis Abundant 4-5 Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro. Late Embryogenesis Abundant 4-5;(source:Araport11) Ipc04G0023070 AT5G24510.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc04G0023080 AT5G06990.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc04G0023090 AT5G59370.2 actin 4 Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen. actin 4;(source:Araport11) Ipc04G0023100 AT2G42060.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc04G0023110 AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc04G0023120 AT3G58030.4 RING/U-box superfamily protein Encodes a RING domain E3 ligase. Has overlapping function with MUSE2 in the negative regulation of defence responses. SIKIC2 (and possibly SIKIC1 and 3) is ubiquination target. RING/U-box superfamily protein;(source:Araport11) Ipc04G0023130 AT5G06710.1 homeobox from Arabidopsis thaliana Homeobox-leucine zipper protein. homeobox leucine zipper protein;(source:Araport11) Ipc04G0023140 AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0023150 AT5G06700.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc04G0023160 AT5G06700.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc04G0023170 AT3G12050.1 Aha1 domain-containing protein 0 Aha1 domain-containing protein;(source:Araport11) Ipc04G0023180 AT3G12040.1 DNA-3-methyladenine glycosylase (MAG) Encodes a 3-methyladenine-DNA glycosylase. Arabdiopsis cDNA complements the methyl methanesulfonate-sensitive phenotype of an Escherichia coli double mutant deficient in 3-methyladenine glycosylases (DNA-3-methyladenine glycosidases I and II, EC 3.2.2.20 and 3.2.2.21, respectively, encoded by tag and alkA). DNA-3-methyladenine glycosylase (MAG);(source:Araport11) Ipc04G0023190 AT5G06680.1 spindle pole body component 98 Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. Enriched at the post-cytokinetic cell edges in leaves and roots. The mRNA is cell-to-cell mobile. spindle pole body component 98;(source:Araport11) Ipc04G0023200 AT2G41970.1 Protein kinase superfamily protein Encodes MRI, a plasma membrane-localized member of the RLCK-VIII subfamily. Preferentially expressed in both pollen tubes and root hairs. mri-knockout mutants display spontaneous pollen tube and root-hair bursting. Protein kinase superfamily protein;(source:Araport11) Ipc04G0023210 AT3G58560.1 DNAse I-like superfamily protein Encodes a protein that is involved in mRNA processing and localized to cytoplasmic p-bodies. Double mutants with CCR4b show decreased sensitivity to high concentrations of sucrose. Involved in starch and sucrose metabolism. DNAse I-like superfamily protein;(source:Araport11) Ipc04G0023220 AT1G57860.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc04G0023230 AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc04G0023240 AT5G49040.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc04G0023250 AT3G58050.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0023260 AT2G42520.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0023270 AT2G41950.1 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc04G0023280 AT3G58490.1 Phosphatidic acid phosphatase (PAP2) family protein Encodes a long-chain base 1-phosphate (LCBP) phosphatase that is expressed in the endoplasmic reticulum. Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc04G0023290 AT3G57610.1 adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate) adenylosuccinate synthase;(source:Araport11) Ipc04G0023300 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc04G0023310 AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein 0 zinc finger (C2H2 type, AN1-like) family protein;(source:Araport11) Ipc04G0023320 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc04G0023330 AT1G60080.1 3'-5'-exoribonuclease family protein 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc04G0023340 AT2G41740.2 0 Encodes a protein with high homology to animal villin. villin 2;(source:Araport11) Ipc04G0023350 AT2G41720.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein that is essential for trans-splicing of a chloroplast small ribosomal subunit transcript. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0023360 AT1G79540.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0023370 AT2G41700.1 ATP-binding cassette A1 0 ATP-binding cassette A1;(source:Araport11) Ipc04G0023380 AT2G41680.1 NADPH-dependent thioredoxin reductase C Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage. NADPH-dependent thioredoxin reductase C;(source:Araport11) Ipc04G0023390 AT4G09760.4 0 encodes a choline synthase whose gene expression is induced by high salt and mannitol. Protein kinase superfamily protein;(source:Araport11) Ipc04G0023400 AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes SIN2 (SHORT INTEGUMENTS 2), a mitochondrial DAR GTPase. SIN2 is hypothesized to function in mitochondrial ribosome assembly. sin2 mutants produce ovules with short integuments due to early cessation of cell division in these structures. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0023410 AT5G13790.1 AGAMOUS-like 15 AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.AGL15 binds the HAE promoter in floral receptacles and represses HAE expression. AGL15 is phosphorylated in a MKK4/5 dependent manner in floral receptacles. Serines 231 and 257 are phosphorylated in floral receptacles. AGL15 also directly regulates the expression of the peroxidase PRX17, linking it to lignified tissue expression. AGAMOUS-like 15;(source:Araport11) Ipc04G0023420 AT5G63520.1 0 0 F-box/LRR protein;(source:Araport11) Ipc04G0023430 AT2G41640.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc04G0023440 AT3G10330.1 Cyclin-like family protein 0 Cyclin-like family protein;(source:Araport11) Ipc04G0023450 AT3G10330.1 Cyclin-like family protein 0 Cyclin-like family protein;(source:Araport11) Ipc04G0023460 AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0023470 AT3G57830.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0023480 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc04G0023490 AT3G20860.1 NIMA-related kinase 5 Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. Serine/Threonine kinase catalytic domain protein;(source:Araport11) Ipc04G0023500 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0023510 AT3G18140.1 Transducin/WD40 repeat-like superfamily protein Encodes LST8-1, involved in regulating amino acid accumulation and the synthesis of myo-inositol and raffinose during plant adaptation to long days. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0023520 AT3G57650.1 lysophosphatidyl acyltransferase 2 Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity. lysophosphatidyl acyltransferase 2;(source:Araport11) Ipc04G0023530 AT4G10550.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc04G0023540 AT4G34640.1 squalene synthase 1 Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway. The mRNA is cell-to-cell mobile. squalene synthase 1;(source:Araport11) Ipc04G0023550 AT3G50890.1 homeobox protein 28 0 homeobox protein 28;(source:Araport11) Ipc04G0023560 AT1G75540.1 salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile. salt tolerance homolog2;(source:Araport11) Ipc04G0023570 AT4G34630.1 0 0 prostatic spermine-binding-like protein;(source:Araport11) Ipc04G0023580 AT4G39090.1 Papain family cysteine protease Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R–mediated resistance response. Papain family cysteine protease;(source:Araport11) Ipc04G0023590 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc04G0023600 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc04G0023610 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0023620 AT4G36360.1 beta-galactosidase 3 putative beta-galactosidase (BGAL3 gene) beta-galactosidase 3;(source:Araport11) Ipc04G0023630 AT2G21470.1 SUMO-activating enzyme 2 Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 2;(source:Araport11) Ipc04G0023650 #N/A #N/A #N/A #N/A Ipc04G0023640 AT4G39110.1 Malectin/receptor-like protein kinase family protein bups1 and bups1/2 double mutants have reduced feritlity due to premature rupture of pollen tubes before they reach the ovule. BUSP1 interacts with RALF4/19 peptide ligands and ANX1/2 receptors. BUPS/ANX signaling may regulate and promote pollen tube growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc04G0023660 AT1G45000.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0023670 AT4G39120.1 myo-inositol monophosphatase like 2 Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro. inositol monophosphatase family protein;(source:Araport11) Ipc04G0023680 AT4G39140.5 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0023690 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc04G0023700 AT5G26820.1 iron-regulated protein 3 Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis. The mRNA is cell-to-cell mobile. iron-regulated protein 3;(source:Araport11) Ipc04G0023710 AT2G21520.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc04G0023720 AT2G21540.5 0 0 SEC14-like 3;(source:Araport11) Ipc04G0023730 AT4G34560.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0023740 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc04G0023750 AT2G21580.1 Ribosomal protein S25 family protein 0 Ribosomal protein S25 family protein;(source:Araport11) Ipc04G0023760 AT2G21600.1 endoplasmatic reticulum retrieval protein 1B Key player of retrieval of ER membrane proteins The mRNA is cell-to-cell mobile. endoplasmatic reticulum retrieval protein 1B;(source:Araport11) Ipc04G0023770 AT4G25730.1 FtsJ-like methyltransferase family protein 0 FtsJ-like methyltransferase family protein;(source:Araport11) Ipc04G0023780 AT2G18260.2 0 member of SYP11 Gene Family syntaxin of plants 112;(source:Araport11) Ipc04G0023790 AT4G34530.1 cryptochrome-interacting basic-helix-loop-helix 1 Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression. cryptochrome-interacting basic-helix-loop-helix 1;(source:Araport11) Ipc04G0023800 AT3G54630.1 0 0 kinetochore protein;(source:Araport11) Ipc04G0023810 AT1G75250.1 RAD-like 6 0 RAD-like 6;(source:Araport11) Ipc04G0023820 AT1G19440.1 3-ketoacyl-CoA synthase 4 Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 4;(source:Araport11) Ipc04G0023830 AT4G34430.3 DNA-binding family protein Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002). DNA-binding family protein;(source:Araport11) Ipc04G0023840 AT2G18470.3 0 Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4;(source:Araport11) Ipc09G0004800 AT5G57740.1 XB3 ortholog 2 in Arabidopsis thaliana Encodes a RING-type E3 ligase XBAT32. Mediates the proteasomal degradation of the ethylene biosynthetic enzyme, 1-aminocyclopropane-1-carboxylate synthase 7. hypothetical protein;(source:Araport11) Ipc09G0004810 AT1G10150.1 Carbohydrate-binding protein 0 Carbohydrate-binding protein;(source:Araport11) Ipc09G0004820 AT3G49780.1 phytosulfokine 4 precursor Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype. phytosulfokine 4 precursor;(source:Araport11) Ipc09G0004830 AT4G10810.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0004840 AT3G49760.1 basic leucine-zipper 5 0 basic leucine-zipper 5;(source:Araport11) Ipc09G0004850 AT3G50520.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc09G0004860 AT2G36420.1 0 0 nucleolin-like protein;(source:Araport11) Ipc09G0004870 AT1G22680.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0004880 AT2G22840.1 growth-regulating factor 1 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1;(source:Araport11) Ipc09G0004890 AT3G55840.1 Hs1pro-1 protein 0 Hs1pro-1 protein;(source:Araport11) Ipc09G0004900 AT1G58470.2 0 Encodes an mRNA-binding protein that contains two RNA recognition motifs (RRMs) and is expressed in proliferating tissues. Preferentially binds UUAGG, GUAGG and/or UUAGU. Loss of function of RBP1 causes decreased root length. RNA-binding protein 1;(source:Araport11) Ipc09G0004910 AT1G44920.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0004920 AT3G19190.1 autophagy 2 Encodes autophagy-related 2 (ATG2). The mRNA is cell-to-cell mobile. autophagy 2;(source:Araport11) Ipc09G0004930 AT1G44920.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0004940 AT4G37750.1 Integrase-type DNA-binding superfamily protein ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed in the chalaza, floral organ primordia, and lateral shoot organ primordia. Regulates growth and cell numbers during organogenesis. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc09G0004950 AT1G10120.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc09G0004960 AT4G07960.2 0 encodes a gene similar to cellulose synthase Cellulose-synthase-like C12;(source:Araport11) Ipc09G0004970 AT3G30390.3 0 Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc09G0004980 AT3G12210.2 DNA binding 0 DNA binding protein;(source:Araport11) Ipc09G0004990 AT4G07990.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc09G0005000 AT3G49720.3 0 Encodes CGR2 (cotton Golgi-related 2). CGR2 and a close homologue CGR3 have overlapping roles in plant growth and pectin methylesterification in the Golgi apparatus. transmembrane protein;(source:Araport11) Ipc09G0005010 AT4G37770.1 1-amino-cyclopropane-1-carboxylate synthase 8 Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8;(source:Araport11) Ipc09G0005020 AT1G58520.7 0 0 GDSL-like lipase/acylhydrolase superfamily protein;(source:Araport11) Ipc09G0005030 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005040 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005050 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005060 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005070 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005080 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005090 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005100 AT4G03230.3 0 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc09G0005110 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005120 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005130 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005140 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005150 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0005160 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc09G0005170 AT3G27330.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc09G0005180 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0005190 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0005200 AT4G37790.1 Homeobox-leucine zipper protein family Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper protein family;(source:Araport11) Ipc09G0005210 AT1G36050.1 Endoplasmic reticulum vesicle transporter protein 0 Endoplasmic reticulum vesicle transporter protein;(source:Araport11) Ipc09G0005220 AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0 Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11) Ipc09G0005230 AT3G57150.1 homologue of NAP57 Encodes a putative pseudouridine synthase (NAP57). homologue of NAP57;(source:Araport11) Ipc09G0005240 AT3G19050.1 phragmoplast orienting kinesin 2 PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2;(source:Araport11) Ipc09G0005250 AT1G51580.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc09G0005260 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc09G0005270 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc09G0005280 AT5G49660.1 Leucine-rich repeat transmembrane protein kinase family protein The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc09G0005290 AT1G09970.1 Leucine-rich receptor-like protein kinase family protein RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc09G0005300 AT5G07760.1 formin homology 2 domain-containing protein / FH2 domain-containing protein 0 formin homology 2 domain-containing protein / FH2 domain-containing protein;(source:Araport11) Ipc09G0005310 AT1G27600.2 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc09G0005320 AT1G27595.1 0 Encodes a protein of unknown function containing a Symplekin C domain that is involved in negative regulation of glucose response. Mutants show increased sensitivity to glucose with a variety of assays. symplekin;(source:Araport11) Ipc09G0005330 AT3G19430.2 0 0 late embryogenesis abundant protein-related / LEA protein-like protein;(source:Araport11) Ipc09G0005340 AT1G58290.1 Glutamyl-tRNA reductase family protein Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis. Glutamyl-tRNA reductase family protein;(source:Araport11) Ipc09G0005350 AT5G65640.1 beta HLH protein 93 bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages. beta HLH protein 93;(source:Araport11) Ipc09G0005360 AT1G58280.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc09G0005370 AT5G26780.4 0 Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1. serine hydroxymethyltransferase 2;(source:Araport11) Ipc09G0005380 AT5G64410.1 oligopeptide transporter 4 oligopeptide transporter oligopeptide transporter 4;(source:Araport11) Ipc09G0005390 AT4G39780.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc09G0005400 AT1G09920.1 TRAF-type zinc finger-related 0 TRAF-type zinc finger-like protein;(source:Araport11) Ipc09G0005410 AT1G30290.1 Tetratricopeptide repeat (TPR)-like superfamily protein unknown protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0005420 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc09G0005430 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc09G0005440 AT1G26370.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc09G0005450 AT1G55860.1 ubiquitin-protein ligase 1 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. LOW protein: E3 ubiquitin ligase-like protein;(source:Araport11) Ipc09G0005460 AT1G74520.2 0 Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible. HVA22 homologue A;(source:Araport11) Ipc09G0005470 AT1G09710.4 0 Paralog of DRMY1 with unknown function. Homeodomain-like superfamily protein;(source:Araport11) Ipc09G0005480 AT1G58215.1 0 0 spindle pole body component 110;(source:Araport11) Ipc09G0005490 AT4G38060.4 0 0 hypothetical protein;(source:Araport11) Ipc09G0005500 AT5G10920.1 L-Aspartase-like family protein 0 L-Aspartase-like family protein;(source:Araport11) Ipc09G0005510 AT1G58200.2 MSCS-like 3 A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity. MSCS-like 3;(source:Araport11) Ipc09G0005520 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc09G0005530 AT1G04290.2 0 0 Thioesterase superfamily protein;(source:Araport11) Ipc09G0005540 AT4G31790.2 Tetrapyrrole (Corrin/Porphyrin) Methylases 0 Tetrapyrrole (Corrin/Porphyrin) Methylase;(source:Araport11) Ipc09G0005550 AT2G01710.1 Chaperone DnaJ-domain superfamily protein SDJ2 functions partially redundantly with SDJ1 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc09G0005560 AT5G64816.4 0 Thionin-like gene. thionin-like protein;(source:Araport11) Ipc09G0005570 AT4G24550.2 Clathrin adaptor complexes medium subunit family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc09G0005580 AT5G49700.1 Predicted AT-hook DNA-binding family protein 0 Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc09G0005590 AT4G24560.1 ubiquitin-specific protease 16 Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. ubiquitin-specific protease 16;(source:Araport11) Ipc09G0005600 AT1G09740.2 0 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc09G0005610 AT1G09750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0005620 AT4G24580.2 0 Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube. Rho GTPase activation protein (RhoGAP) with PH domain-containing protein;(source:Araport11) Ipc09G0005630 AT4G24620.1 phosphoglucose isomerase 1 The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions. phosphoglucose isomerase 1;(source:Araport11) Ipc09G0005640 AT5G16650.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc09G0005650 AT5G18475.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0005660 AT2G33740.2 Nitrogen regulatory PII-like, alpha/beta encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast. The mRNA is cell-to-cell mobile. Nitrogen regulatory PII-like, alpha/beta;(source:Araport11) Ipc09G0005670 AT5G10940.2 transducin family protein / WD-40 repeat family protein ASG2 is farnesylated protein and this post-translational modification impacts its subcellular localization. It is the homolog of the human anti-obesity factor WDTC1 and is involved in the negative regulation of fatty acid biosynthesis. The non-farnesylated form displays a nucleo-cytosolic subcellular localization. The farnesylated form displays a cytosolic subcellular localization. Interaction with At4g05420 (DDB1a) was shown using BiFC approach. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc09G0005680 AT1G02070.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc09G0005690 AT3G54210.1 Ribosomal protein L17 family protein 0 Ribosomal protein L17 family protein;(source:Araport11) Ipc09G0005700 AT1G28390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc09G0005710 AT4G16340.2 0 Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects. guanyl-nucleotide exchange factors;(source:Araport11) Ipc09G0005720 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005730 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005740 AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein Encodes a hydroxypyruvate reductase that reduces HP to glycerate and shows even more activity with glyoxylate, a more upstream intermediate of the photorespiratory cycle. It is likely targeted to the chloroplast where it could provide a compensatory bypass for the reduction of HP and glyoxylate within this compartment. Together with HPPR2 and TAT1 involved in the biosynthesis of pHPL from tyrosine. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc09G0005750 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005760 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005770 AT5G49980.1 auxin F-box protein 5 0 auxin F-box protein 5;(source:Araport11) Ipc09G0005780 AT4G14600.1 Target SNARE coiled-coil domain protein 0 Target SNARE coiled-coil domain protein;(source:Araport11) Ipc09G0005790 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc09G0005800 AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0005810 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005820 AT2G37550.2 ARF-GAP domain 7 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. ARF-GAP domain 7;(source:Araport11) Ipc09G0005830 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005840 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc09G0005850 AT5G65380.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc09G0005860 AT4G40080.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc09G0005870 AT5G09225.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0005880 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0005890 AT2G46330.1 arabinogalactan protein 16 Encodes arabinogalactan protein (AGP16). arabinogalactan protein 16;(source:Araport11) Ipc09G0005900 AT5G19600.1 sulfate transporter 3;5 Encodes sulfate transporter Sultr3;5. sulfate transporter 3;(source:Araport11) Ipc09G0005910 AT3G24480.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc09G0005920 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0005930 AT3G24460.2 0 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc09G0005940 AT3G24450.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc09G0005950 AT3G24440.1 Fibronectin type III domain-containing protein Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM. Fibronectin type III domain-containing protein;(source:Araport11) Ipc09G0005960 AT3G24420.1 alpha/beta-Hydrolases superfamily protein DLK2 is a divergent member of the DWARF14 family. It's expression is dependent on D14 and KAI2 but it does not appear to play a role in stringolactone metabolism. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0005970 AT4G13400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc09G0005980 AT1G28090.4 0 0 Polynucleotide adenylyltransferase family protein;(source:Araport11) Ipc09G0005990 #N/A #N/A #N/A #N/A Ipc09G0006000 AT4G13400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc09G0006010 AT4G13400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc09G0006020 AT4G32360.1 Pyridine nucleotide-disulphide oxidoreductase family protein 0 Pyridine nucleotide-disulfide oxidoreductase family protein;(source:Araport11) Ipc09G0006030 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc09G0006040 AT4G28830.4 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0006050 AT2G20080.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0006060 AT4G28850.1 xyloglucan endotransglucosylase/hydrolase 26 0 xyloglucan endotransglucosylase/hydrolase 26;(source:Araport11) Ipc09G0006070 AT5G19570.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0006080 AT4G28880.4 0 Member of CKL gene family (CKL-A group) casein kinase I-like 3;(source:Araport11) Ipc09G0006090 AT4G21160.4 Calcium-dependent ARF-type GTPase activating protein family ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11) Ipc09G0006100 AT1G30510.1 root FNR 2 Encodes a root-type ferredoxin:NADP(H) oxidoreductase. root FNR 2;(source:Araport11) Ipc09G0006110 AT4G20940.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma-membrane localized LRR receptor-like protein involved in both ABA and H202 mediated signaling involved in stomatal movement. TAIR10 annotation for this gene has a low confidence score (2-star). See Comments field for structural annotation by the community. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc09G0006120 AT5G44450.1 methyltransferases 0 alpha amino-terminal protein methyltransferase;(source:Araport11) Ipc09G0006130 AT2G03750.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0006140 AT4G20910.2 double-stranded RNA binding protein-related / DsRBD protein-related Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation. double-stranded RNA binding protein-related / DsRBD protein-like protein;(source:Araport11) Ipc09G0006150 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0006160 AT3G47390.2 cytidine/deoxycytidylate deaminase family protein Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant. cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc09G0006170 AT4G20870.2 0 encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death. fatty acid hydroxylase 2;(source:Araport11) Ipc09G0006180 AT4G20840.1 FAD-binding Berberine family protein Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). FAD-binding Berberine family protein;(source:Araport11) Ipc09G0006190 AT1G11770.1 FAD-binding Berberine family protein Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). FAD-binding Berberine family protein;(source:Araport11) Ipc09G0006200 AT1G30680.1 toprim domain-containing protein Twinkle is a dual localized (mitochondria and chloroplast) DNA primase-helicase. It synthesizes RNA primers from a 5′ -(G/C)GGA-3′ template, where the last two 3' nucleotides are cryptic. Mitochondrial protein involved in DNA replication which binds to DNA polymerases, Pol1A and Pol1B. toprim domain-containing protein;(source:Araport11) Ipc09G0006210 AT1G10510.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc09G0006220 AT5G11720.1 Glycosyl hydrolases family 31 protein 0 Glycosyl hydrolases family 31 protein;(source:Araport11) Ipc09G0006230 AT4G19490.2 VPS54 Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system. VPS54;(source:Araport11) Ipc09G0006240 AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein 0 Ubiquitin C-terminal hydrolases superfamily protein;(source:Araport11) Ipc09G0006250 AT1G30620.6 0 encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc09G0006260 AT1G29580.1 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc09G0006270 AT5G45120.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0006280 AT1G31300.3 0 0 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11) Ipc09G0006290 AT3G12920.1 SBP (S-ribonuclease binding protein) family protein Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea. SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc09G0006300 AT3G02160.2 0 0 Bromodomain transcription factor;(source:Araport11) Ipc09G0006310 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc09G0006320 AT1G10180.1 0 0 LOW protein: exocyst complex component-like protein;(source:Araport11) Ipc09G0006330 #N/A #N/A #N/A #N/A Ipc09G0006340 AT1G05830.4 0 Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1. trithorax-like protein 2;(source:Araport11) Ipc09G0006350 AT1G10155.1 phloem protein 2-A10 0 phloem protein 2-A10;(source:Araport11) Ipc09G0006360 AT4G19840.1 phloem protein 2-A1 encodes a phloem lectin, similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells. The mRNA is cell-to-cell mobile. phloem protein 2-A1;(source:Araport11) Ipc09G0006370 AT5G45030.2 Trypsin family protein 0 Trypsin family protein;(source:Araport11) Ipc09G0006380 AT1G31175.2 0 0 cytochrome C oxidase biogenesis Cmc1-like protein;(source:Araport11) Ipc09G0006400 AT4G19900.1 alpha 1,4-glycosyltransferase family protein 0 alpha 1,4-glycosyltransferase family protein;(source:Araport11) Ipc09G0006390 AT2G17230.1 EXORDIUM like 5 0 EXORDIUM like 5;(source:Araport11) Ipc09G0006410 AT2G35140.5 0 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc09G0006420 AT5G55140.1 ribosomal protein L30 family protein 0 ribosomal protein L30 family protein;(source:Araport11) Ipc09G0006430 AT2G35130.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0006440 AT2G35120.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc09G0006450 AT1G31160.1 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined. HISTIDINE TRIAD NUCLEOTIDE-BINDING 2;(source:Araport11) Ipc09G0006460 AT5G35810.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc09G0006470 AT5G35810.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc09G0006480 AT3G18670.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc09G0006490 AT4G21220.1 Trimeric LpxA-like enzymes superfamily protein 0 Trimeric LpxA-like enzymes superfamily protein;(source:Araport11) Ipc09G0006500 AT4G19980.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0006510 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc09G0006520 AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) ATP dependent copper transporter vital for ethylene response pathway copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1);(source:Araport11) Ipc09G0006530 AT4G39720.4 0 0 VQ motif-containing protein;(source:Araport11) Ipc09G0006540 AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc09G0006550 AT2G32260.1 phosphorylcholine cytidylyltransferase 0 phosphorylcholine cytidylyltransferase;(source:Araport11) Ipc09G0006560 AT4G20050.7 0 Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. Pectin lyase-like superfamily protein;(source:Araport11) Ipc09G0006570 AT5G51710.2 K+ efflux antiporter 5 member of Putative potassium proton antiporter family K+ efflux antiporter 5;(source:Araport11) Ipc09G0006580 AT1G62260.1 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9;(source:Araport11) Ipc09G0006590 AT4G20070.1 allantoate amidohydrolase The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis. The mRNA is cell-to-cell mobile. allantoate amidohydrolase;(source:Araport11) Ipc09G0006600 AT2G02010.1 glutamate decarboxylase 4 0 glutamate decarboxylase 4;(source:Araport11) Ipc09G0006610 AT5G50920.1 CLPC homologue 1 Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. Association of Hsp93 with the inner envelope membrane through its N domain is important for the functions of Hsp93 in vivo. CLPC homologue 1;(source:Araport11) Ipc09G0006620 AT3G12750.1 zinc transporter 1 precursor A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. zinc transporter 1 precursor;(source:Araport11) Ipc09G0006630 AT1G53645.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc09G0006640 AT3G12750.1 zinc transporter 1 precursor A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. zinc transporter 1 precursor;(source:Araport11) Ipc09G0006650 AT2G34710.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc09G0006660 AT5G04960.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a protein that modulates the activity of pectin methylesterase within the cell wall. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc09G0006670 AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein Gene structure annotation for AT2G33160.1 is inaccurate in TAIR10, see PMID:23709666 and Comments field on the locus page for updated annotation. glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein;(source:Araport11) Ipc09G0006680 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc09G0006690 AT4G20090.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0006700 AT4G20910.2 double-stranded RNA binding protein-related / DsRBD protein-related Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation. double-stranded RNA binding protein-related / DsRBD protein-like protein;(source:Araport11) Ipc09G0006710 AT3G47630.6 0 0 translocator assembly/maintenance protein;(source:Araport11) Ipc09G0006720 AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0006730 AT1G79020.1 Enhancer of polycomb-like transcription factor protein 0 Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc09G0006740 AT3G10710.1 root hair specific 12 0 root hair specific 12;(source:Araport11) Ipc09G0006750 AT3G10710.1 root hair specific 12 0 root hair specific 12;(source:Araport11) Ipc09G0006760 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0006770 AT3G12720.1 myb domain protein 67 Member of the R2R3 factor gene family. myb domain protein 67;(source:Araport11) Ipc09G0006780 AT4G15340.1 pentacyclic triterpene synthase 1 Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast. pentacyclic triterpene synthase 1;(source:Araport11) Ipc09G0006790 AT5G14620.1 domains rearranged methyltransferase 2 A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. domains rearranged methyltransferase 2;(source:Araport11) Ipc09G0006800 AT4G20150.1 0 0 excitatory amino acid transporter;(source:Araport11) Ipc09G0006810 AT1G30860.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0006820 AT5G44680.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc09G0006830 AT5G44670.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc09G0006840 AT5G44650.1 0 Encodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage. death domain associated protein;(source:Araport11) Ipc09G0006850 AT1G30840.2 purine permease 4 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 4;(source:Araport11) Ipc09G0006860 AT3G12670.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) Ipc09G0006870 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc09G0006880 AT1G03475.1 Coproporphyrinogen III oxidase Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection. Coproporphyrinogen III oxidase;(source:Araport11) Ipc09G0006890 AT5G24320.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0006900 AT5G15230.1 GAST1 protein homolog 4 Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity. GAST1 protein homolog 4;(source:Araport11) Ipc09G0006910 AT4G10380.1 NOD26-like intrinsic protein 5;1 Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells. NOD26-like intrinsic protein 5;(source:Araport11) Ipc09G0006920 AT1G33265.1 Transmembrane proteins 14C 0 Transmembrane proteins 14C;(source:Araport11) Ipc09G0006930 AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein 0 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein;(source:Araport11) Ipc09G0006940 AT1G33170.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0006950 AT1G27045.4 0 Encodes ATHB54, a member of the homeodomain leucine zipper (HD-Zip) family protein. Please note that this locus was split from AT1G27050 in the TAIR10 genome release (2010). Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein). Homeobox-leucine zipper protein family;(source:Araport11) Ipc09G0006960 AT5G47610.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0006970 AT1G73940.1 0 0 tumor necrosis factor receptor family protein;(source:Araport11) Ipc09G0006980 AT2G45530.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0006990 AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc09G0007000 AT1G01050.2 0 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. pyrophosphorylase 1;(source:Araport11) Ipc09G0007010 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc09G0007020 AT1G53030.1 Cytochrome C oxidase copper chaperone (COX17) encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots. Cytochrome C oxidase copper chaperone (COX17);(source:Araport11) Ipc09G0007030 AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein membrane related protein CP5 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc09G0007040 AT5G53650.1 0 0 ABC transporter A family protein;(source:Araport11) Ipc09G0007050 AT5G42110.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0007060 AT1G32900.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0007070 AT4G10590.4 0 encodes a member of the ubiquitin-specific protease family, UBP10 ubiquitin-specific protease 10;(source:Araport11) Ipc09G0007080 AT1G32790.1 CTC-interacting domain 11 RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins. CTC-interacting domain 11;(source:Araport11) Ipc09G0007090 AT1G32770.1 NAC domain containing protein 12 Encodes SND1, a NAC Domain transcription factor involved in secondary wall biosynthesis in fibers. Expressed specifically in interfascicular fibers and xylary fibers in stems. Expressed in the procambium of stem inflorescences and root. May act as a negative regulator of secondary wall thickening in xylary fibers. Acts redundantly with NST1 to control development of secondary walls in siliques. NAC domain containing protein 12;(source:Araport11) Ipc09G0007100 AT4G30960.1 SOS3-interacting protein 3 Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile. SOS3-interacting protein 3;(source:Araport11) Ipc09G0007110 AT4G30960.1 SOS3-interacting protein 3 Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile. SOS3-interacting protein 3;(source:Araport11) Ipc09G0007120 AT4G10630.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc09G0007130 AT4G24880.1 0 0 snurportin-1 protein;(source:Araport11) Ipc09G0007140 AT5G50400.1 purple acid phosphatase 27 0 purple acid phosphatase 27;(source:Araport11) Ipc09G0007150 AT4G15233.2 ABC-2 and Plant PDR ABC-type transporter family protein 0 ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) Ipc09G0007160 AT4G00820.1 IQ-domain 17 0 IQ-domain 17;(source:Araport11) Ipc09G0007170 AT1G64690.2 0 Encodes BRANCHLESS TRICHOME (BLT) involved in trichome development. A large portion of the internal amino acid sequence of BLT is predicted to form a coiled-coil domain. BLT mutants form branchless trichomes with blunt tips. branchless trichome;(source:Araport11) Ipc09G0007180 AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH14 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH13 and bHLH17 to negatively regulate jasmonate responses. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0004450 AT5G07420.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0004460 AT1G22640.1 myb domain protein 3 MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression myb domain protein 3;(source:Araport11) Ipc10G0004470 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0004480 AT2G01340.1 0 Encodes a protein whose expression is responsive to nematode infection. plastid movement impaired protein;(source:Araport11) Ipc10G0004490 AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc10G0004500 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0004510 AT2G04100.2 0 0 MATE efflux family protein;(source:Araport11) Ipc10G0004520 AT5G37810.1 NOD26-like intrinsic protein 4;1 0 NOD26-like intrinsic protein 4;(source:Araport11) Ipc10G0004530 AT1G23060.4 0 0 hypothetical protein;(source:Araport11) Ipc10G0004540 AT1G70985.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0004550 AT1G23040.3 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0004560 AT1G71000.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc10G0004570 AT1G70890.1 MLP-like protein 43 0 MLP-like protein 43;(source:Araport11) Ipc10G0004580 AT1G70830.5 MLP-like protein 28 0 MLP-like protein 28;(source:Araport11) Ipc10G0004590 AT5G28010.2 0 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc10G0004600 AT1G70840.1 MLP-like protein 31 0 MLP-like protein 31;(source:Araport11) Ipc10G0004610 AT5G28010.2 0 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc10G0004630 AT5G28010.2 0 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc10G0004640 AT1G70940.1 Auxin efflux carrier family protein A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in regulating PIN3 trafficking to the plasma membrane. The mRNA is cell-to-cell mobile. Auxin efflux carrier family protein;(source:Araport11) Ipc10G0004650 AT3G18040.5 0 Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9;(source:Araport11) Ipc10G0004660 AT1G30110.2 nudix hydrolase homolog 25 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 25;(source:Araport11) Ipc10G0004670 AT2G19080.1 metaxin-related 0 metaxin-like protein;(source:Araport11) Ipc10G0004680 AT2G01430.1 homeobox-leucine zipper protein 17 ATHB17 is a member of the HD-Zip transcription factor family. It is expressed most strongly in roots at different stages of development and induced by ABA, paraquat, drought, and NaCl treatments. Loss of function mutants are more sensitive to salt and drought stress.The protein is nuclear localized and has been shown to bind to the promoter of SIG5 and other genes. homeobox-leucine zipper protein 17;(source:Araport11) Ipc10G0004690 AT4G13770.1 cytochrome P450, family 83, subfamily A, polypeptide 1 Encodes a cytochrome p450 enzyme that catalyzes the initial conversion of aldoximes to thiohydroximates in the synthesis of glucosinolates not derived from tryptophan. Also has a role in auxin homeostasis. cytochrome P450, family 83, subfamily A, polypeptide 1;(source:Araport11) Ipc10G0004700 AT3G60670.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc10G0004710 AT1G14920.1 GRAS family transcription factor family protein Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. GRAS family transcription factor family protein;(source:Araport11) Ipc10G0004720 AT2G44510.1 CDK inhibitor P21 binding protein 0 CDK inhibitor P21 binding protein;(source:Araport11) Ipc10G0004730 AT1G70770.2 Protein of unknown function DUF2359, transmembrane 0 transmembrane protein (Protein of unknown function DUF2359, transmembrane);(source:Araport11) Ipc10G0004740 AT1G70760.1 inorganic carbon transport protein-related a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity. The mRNA is cell-to-cell mobile. inorganic carbon transport protein-like protein;(source:Araport11) Ipc10G0004750 AT1G23180.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0004760 AT2G01600.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc10G0004770 AT1G70740.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0004780 AT1G14900.1 high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A;(source:Araport11) Ipc10G0004790 AT1G70730.1 Phosphoglucomutase/phosphomannomutase family protein Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development. Phosphoglucomutase/phosphomannomutase family protein;(source:Araport11) Ipc10G0004800 AT3G02060.2 DEAD/DEAH box helicase, putative 0 DEAD/DEAH box helicase;(source:Araport11) Ipc10G0004810 AT1G14890.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc10G0004820 AT1G14870.1 PLANT CADMIUM RESISTANCE 2 PCR2 encodes a membrane protein involved in zinc transport and detoxification. PLANT CADMIUM RESISTANCE 2;(source:Araport11) Ipc10G0004830 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc10G0004840 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0004850 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc10G0004860 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0004870 AT5G59840.1 Ras-related small GTP-binding family protein 0 Ras-related small GTP-binding family protein;(source:Araport11) Ipc10G0004880 AT3G01820.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0004890 AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc10G0004900 AT3G17840.1 receptor-like kinase 902 Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. receptor-like kinase 902;(source:Araport11) Ipc10G0004910 AT3G17840.1 receptor-like kinase 902 Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. receptor-like kinase 902;(source:Araport11) Ipc10G0004920 AT5G04960.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a protein that modulates the activity of pectin methylesterase within the cell wall. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc10G0004930 AT2G01630.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc10G0004940 AT1G23220.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc10G0004950 AT1G70670.1 Caleosin-related family protein The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling. Caleosin-related family protein;(source:Araport11) Ipc10G0004960 AT1G70680.1 Caleosin-related family protein 0 Caleosin-related family protein;(source:Araport11) Ipc10G0004970 AT1G70670.1 Caleosin-related family protein The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling. Caleosin-related family protein;(source:Araport11) Ipc10G0004980 AT1G23260.1 MMS ZWEI homologue 1 MMZ1/UEV1A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1A can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. However, a combination of MMZ1/UEV1A and UBC13A do not do a good job of rescuing an mms2 ubc13 double mutant in yeast. MMZ1/UEV1A transcripts are found at low levels in most plant organs, but cannot be detected in the pollen. Transcript levels do not appear to be stress-inducible. The uev1a-1 mutant shows normal sensitivity to MMS in germination assays suggesting that UEV1A is not required for DNA damage tolerance during this developmental stage. MMS ZWEI homologue 1;(source:Araport11) Ipc10G0004990 AT4G00850.1 GRF1-interacting factor 3 Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA GRF1-interacting factor 3;(source:Araport11) Ipc10G0005000 AT4G36720.1 HVA22-like protein K 0 HVA22-like protein K;(source:Araport11) Ipc10G0005010 AT2G13680.1 callose synthase 5 Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5;(source:Araport11) Ipc10G0005020 AT2G13680.1 callose synthase 5 Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5;(source:Araport11) Ipc10G0005030 AT2G01670.1 nudix hydrolase homolog 17 0 nudix hydrolase homolog 17;(source:Araport11) Ipc10G0005040 AT2G01690.1 ARM repeat superfamily protein Homologous to mammalian VAC14s, which is involved in the production of phosphatidylinositol 3,5-bisphosphate. Mutants are male gametophyte lethal. ARM repeat superfamily protein;(source:Araport11) Ipc10G0005050 AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc10G0005060 AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo cleavage and polyadenylation specificity factor 73 kDa subunit-II;(source:Araport11) Ipc10G0005070 AT1G68060.1 microtubule-associated proteins 70-1 Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues. microtubule-associated proteins 70-1;(source:Araport11) Ipc10G0005080 AT2G33030.1 receptor like protein 25 0 receptor like protein 25;(source:Araport11) Ipc10G0005090 AT1G48140.1 dolichol-phosphate mannosyltransferase-related Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis. dolichol-phosphate mannosyltransferase-like protein;(source:Araport11) Ipc10G0005100 AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative 0 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase;(source:Araport11) Ipc10G0005110 AT1G76280.5 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005120 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc10G0005130 AT2G45440.1 dihydrodipicolinate synthase Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast. dihydrodipicolinate synthase;(source:Araport11) Ipc10G0005140 AT1G14820.3 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc10G0005150 AT1G14810.1 semialdehyde dehydrogenase family protein encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis semialdehyde dehydrogenase family protein;(source:Araport11) Ipc10G0005190 AT1G14790.1 RNA-dependent RNA polymerase 1 Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs. RNA-dependent RNA polymerase 1;(source:Araport11) Ipc10G0005170 AT1G14790.1 RNA-dependent RNA polymerase 1 Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs. RNA-dependent RNA polymerase 1;(source:Araport11) Ipc10G0005180 AT1G14780.1 MAC/Perforin domain-containing protein 0 MAC/Perforin domain-containing protein;(source:Araport11) Ipc10G0005160 AT1G14810.1 semialdehyde dehydrogenase family protein encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis semialdehyde dehydrogenase family protein;(source:Araport11) Ipc10G0005200 AT1G14790.1 RNA-dependent RNA polymerase 1 Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs. RNA-dependent RNA polymerase 1;(source:Araport11) Ipc10G0005210 AT1G14790.1 RNA-dependent RNA polymerase 1 Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs. RNA-dependent RNA polymerase 1;(source:Araport11) Ipc10G0005220 AT1G14780.1 MAC/Perforin domain-containing protein 0 MAC/Perforin domain-containing protein;(source:Araport11) Ipc10G0005230 AT1G68020.3 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme. UDP-Glycosyltransferase / trehalose-phosphatase family protein;(source:Araport11) Ipc10G0005240 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc10G0005250 AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005260 AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc10G0005270 AT3G24130.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0005280 AT1G14750.1 Cyclin family protein Encodes a meiotic cyclin-like protein, distinct from all other known Arabidopsis cyclins. It is not required for meiotic DSB formation but is necessary for meiotic DSB repair via the homologous chromosome. Cyclin family protein;(source:Araport11) Ipc10G0005290 AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0005300 AT2G01830.5 0 Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane CHASE domain containing histidine kinase protein;(source:Araport11) Ipc10G0005310 AT5G43680.2 0 0 hypothetical protein;(source:Araport11) Ipc10G0005320 AT3G18290.1 zinc finger protein-related Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. The mRNA is cell-to-cell mobile. zinc finger protein-like protein;(source:Araport11) Ipc10G0005330 AT1G66140.1 zinc finger protein 4 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 4;(source:Araport11) Ipc10G0005340 AT3G09740.1 syntaxin of plants 71 syntaxin of plants 71 (SYP71) syntaxin of plants 71;(source:Araport11) Ipc10G0005350 AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc10G0005360 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc10G0005370 AT1G24706.7 0 Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. THO2;(source:Araport11) Ipc10G0005380 AT1G14740.1 Protein of unknown function (DUF1423) Encodes a PHD-finger protein that, with TTA1, is redundantly required for MP-dependent embryonic root meristem initiation. class I heat shock protein, putative (DUF1423);(source:Araport11) Ipc10G0005390 AT4G25570.1 Cytochrome b561/ferric reductase transmembrane protein family Encodes cytochrome b561. Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc10G0005400 AT2G01850.1 endoxyloglucan transferase A3 EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves. The mRNA is cell-to-cell mobile. endoxyloglucan transferase A3;(source:Araport11) Ipc10G0005410 AT4G26680.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005420 AT4G26680.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005430 AT1G25220.1 anthranilate synthase beta subunit 1 Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2). anthranilate synthase beta subunit 1;(source:Araport11) Ipc10G0005440 AT4G22010.1 SKU5 similar 4 0 SKU5 similar 4;(source:Araport11) Ipc10G0005450 AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc10G0005460 AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0005470 AT5G67190.1 DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 2;(source:Araport11) Ipc10G0005480 AT2G35130.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005490 AT2G01890.1 purple acid phosphatase 8 Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group. purple acid phosphatase 8;(source:Araport11) Ipc10G0005500 AT1G68090.1 annexin 5 Encodes a calcium-binding protein annexin (AnnAt5). Plays a vital role in pollen development via Ca2+ dependent membrane trafficking. annexin 5;(source:Araport11) Ipc10G0005510 AT3G58180.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0005520 AT5G16450.2 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase 0 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase;(source:Araport11) Ipc10G0005530 AT2G01900.3 0 Encodes an inositol polyphosphate phosphatidylinositol 5-phosphatase that is expressed in roots and is involved in mediating salt tolerance through endocytosis. DNAse I-like superfamily protein;(source:Araport11) Ipc10G0005540 AT2G01910.1 Microtubule associated protein (MAP65/ASE1) family protein Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria. The mRNA is cell-to-cell mobile. Microtubule associated protein (MAP65/ASE1) family protein;(source:Araport11) Ipc10G0005550 AT2G35585.1 0 0 cystic fibrosis transmembrane conductance regulator;(source:Araport11) Ipc10G0005560 AT1G25240.2 0 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc10G0005570 AT2G01930.2 basic pentacysteine1 BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant. basic pentacysteine1;(source:Araport11) Ipc10G0005580 AT2G01930.2 basic pentacysteine1 BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant. basic pentacysteine1;(source:Araport11) Ipc10G0005590 AT1G50510.1 indigoidine synthase A family protein 0 indigoidine synthase A family protein;(source:Araport11) Ipc10G0005600 AT2G01940.1 C2H2-like zinc finger protein Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. C2H2-like zinc finger protein;(source:Araport11) Ipc10G0005610 AT2G36330.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0005620 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0005630 AT2G36330.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0005640 AT2G39530.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0005650 AT2G01950.1 BRI1-like 2 Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein. BRI1-like 2;(source:Araport11) Ipc10G0005660 AT2G01970.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc10G0005670 AT2G01970.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc10G0005680 AT2G01990.2 0 0 XRI1-like protein;(source:Araport11) Ipc10G0005690 AT1G16810.3 0 0 7-dehydrocholesterol reductase-like protein;(source:Araport11) Ipc10G0005700 AT2G02010.2 0 0 glutamate decarboxylase 4;(source:Araport11) Ipc10G0005710 AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc10G0005720 AT2G39020.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound. The mRNA is cell-to-cell mobile. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc10G0005730 AT5G17270.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc10G0005740 AT4G31870.1 glutathione peroxidase 7 Encodes glutathione peroxidase. Role in the degradation of H2O2 to water using glutathione as electron donor. glutathione peroxidase 7;(source:Araport11) Ipc10G0005750 AT4G24900.2 0 Encodes a nuclear C2H2 domain-containing protein involved in embryo and endosperm development. coiled coil protein;(source:Araport11) Ipc10G0005760 AT4G31580.2 serine/arginine-rich 22 Encodes a Serine/arginine-rich (SR) protein RSZp22. SR proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. RSZp22 is located in the nucleolus. It is a nucleocytoplasmic shuttling protein and an interacting partner to the Arabidopsis U1-70K. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. serine/arginine-rich 22;(source:Araport11) Ipc10G0005770 AT2G24610.1 cyclic nucleotide-gated channel 14 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 14;(source:Araport11) Ipc10G0005780 AT2G24450.1 FASCICLIN-like arabinogalactan protein 3 precursor 0 FASCICLIN-like arabinogalactan protein 3 precursor;(source:Araport11) Ipc10G0005790 AT3G22790.3 0 Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It binds filamentous actin and is localized to the plasma membrane and plasmodesmata. Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc10G0005800 AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family Encodes a Golgi-localized UDP–glucose/UDP–galactose transporter that affects lateral root emergence. UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc10G0005810 AT4G11160.1 Translation initiation factor 2, small GTP-binding protein 0 Translation initiation factor 2, small GTP-binding protein;(source:Araport11) Ipc10G0005820 AT2G24645.3 0 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc10G0005830 AT1G16810.3 0 0 7-dehydrocholesterol reductase-like protein;(source:Araport11) Ipc10G0005840 AT4G31270.1 sequence-specific DNA binding transcription factors Encodes IDAP2. Acts together with IDAP1 and IDM1 to regulate active DNA demethylation. sequence-specific DNA binding transcription factor;(source:Araport11) Ipc10G0005850 AT2G18090.2 0 0 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein;(source:Araport11) Ipc10G0005860 AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005870 AT4G31250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0005880 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc10G0005890 AT3G59280.1 Protein Transporter, Pam16 Encodes the ortholog of yeast PAM16, part of the mitochondrial inner membrane protein import motor. Single mutant plants exhibit a smaller size and enhanced resistance against virulent pathogens. They also display elevated reactive oxygen species (ROS) accumulation. Protein Transporter, Pam16;(source:Araport11) Ipc10G0005900 AT4G31330.1 Protein of unknown function, DUF599 0 transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc10G0005910 AT4G31330.1 Protein of unknown function, DUF599 0 transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc10G0005920 AT5G10720.1 histidine kinase 5 member of Histidine Kinase histidine kinase 5;(source:Araport11) Ipc10G0005930 AT4G31720.3 0 Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15) TBP-associated factor II 15;(source:Araport11) Ipc10G0005940 AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0005950 AT5G09780.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc10G0005960 AT5G10730.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0005970 AT5G24930.1 CONSTANS-like 4 Flowering repressor in long days (LD) and short days (SD) and acts on the expression of FT and FT-like genes as well as on SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 (SOC1). zinc finger CONSTANS-like protein;(source:Araport11) Ipc10G0005980 AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0005990 AT4G13100.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0006000 AT4G31750.2 0 Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). HOPW1-1-interacting 2;(source:Araport11) Ipc10G0006010 AT5G24970.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0006020 AT2G38770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0006030 AT5G24930.1 CONSTANS-like 4 Flowering repressor in long days (LD) and short days (SD) and acts on the expression of FT and FT-like genes as well as on SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 (SOC1). zinc finger CONSTANS-like protein;(source:Araport11) Ipc10G0006040 AT5G26650.1 AGAMOUS-like 36 0 AGAMOUS-like 36;(source:Araport11) Ipc10G0006050 AT5G10750.1 Protein of unknown function (DUF1336) 0 enhanced disease resistance-like protein (DUF1336);(source:Araport11) Ipc10G0006060 AT4G31760.1 Peroxidase superfamily protein 0 peroxidase superfamily protein;(source:Araport11) Ipc10G0006070 AT5G18820.1 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230). TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc10G0006080 AT2G24820.1 translocon at the inner envelope membrane of chloroplasts 55-II 0 translocon at the inner envelope membrane of chloroplasts 55-II;(source:Araport11) Ipc10G0006090 AT2G24970.1 0 0 spindle/kinetochore-associated protein;(source:Araport11) Ipc10G0006100 AT2G24860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc10G0006110 AT2G24940.1 membrane-associated progesterone binding protein 2 0 membrane-associated progesterone binding protein 2;(source:Araport11) Ipc10G0006120 AT5G25050.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0006130 AT3G62820.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc10G0006140 AT5G10810.1 enhancer of rudimentary protein, putative enhancer of rudimentary homolog ATER enhancer of rudimentary protein;(source:Araport11) Ipc10G0006150 AT4G31570.6 0 0 nucleoporin;(source:Araport11) Ipc10G0006160 AT4G31420.1 Zinc finger protein 622 0 Zinc finger protein 622;(source:Araport11) Ipc10G0006170 AT2G24640.1 ubiquitin-specific protease 19 0 ubiquitin-specific protease 19;(source:Araport11) Ipc10G0006180 AT5G10650.2 RING/U-box superfamily protein JUL1 encode a RING-type E3 ubiquitin ligase that is involved in JA responses. It ubiquitinates the JAV1 jasmonic acid response repressor which is then degraded by the proteosome. RING/U-box superfamily protein;(source:Araport11) Ipc10G0006190 AT4G31430.3 0 Encodes a plant-specific protein that physically interacts with CRWN1 and its homolog CRWN4 and localizes at the inner nuclear membrane. KAKU4 deforms the nuclear envelope in a dose-dependent manner, in association with nuclear membrane invagination and stack formation. flocculation protein;(source:Araport11) Ipc10G0006200 AT5G07820.1 Plant calmodulin-binding protein-related 0 Plant calmodulin-binding protein-like protein;(source:Araport11) Ipc10G0006210 AT1G10320.2 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc10G0006220 AT2G34260.1 transducin family protein / WD-40 repeat family protein Encodes a WDxR motif-containing protein that is required for gametogenesis, seed and endosperm development. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc10G0006230 AT1G24030.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0006240 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006250 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006260 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006270 AT5G48140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006280 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006290 AT5G48140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006300 AT5G48140.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006310 AT1G60070.1 Adaptor protein complex AP-1, gamma subunit 0 Adaptor protein complex AP-1, gamma subunit;(source:Araport11) Ipc10G0006320 AT1G23890.2 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc10G0006330 AT3G57380.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc10G0006340 AT1G23870.1 trehalose-phosphatase/synthase 9 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. The mRNA is cell-to-cell mobile. trehalose-phosphatase/synthase 9;(source:Araport11) Ipc10G0006350 AT1G14870.1 PLANT CADMIUM RESISTANCE 2 PCR2 encodes a membrane protein involved in zinc transport and detoxification. PLANT CADMIUM RESISTANCE 2;(source:Araport11) Ipc10G0006360 AT1G23800.1 aldehyde dehydrogenase 2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. aldehyde dehydrogenase 2B7;(source:Araport11) Ipc10G0006370 AT3G57490.1 Ribosomal protein S5 family protein 0 Ribosomal protein S5 family protein;(source:Araport11) Ipc10G0006380 AT1G70330.1 equilibrative nucleotide transporter 1 encodes an adenosine transporter that catalyze a proton-dependent adenosine transport. The mRNA is cell-to-cell mobile. equilibrative nucleotide transporter 1;(source:Araport11) Ipc10G0006390 AT1G60230.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc10G0006400 AT1G23790.1 Plant protein of unknown function (DUF936) 0 dicer-like protein (DUF936);(source:Araport11) Ipc10G0006410 AT1G70420.1 Protein of unknown function (DUF1645) 0 DNA ligase-like protein, putative (DUF1645);(source:Araport11) Ipc10G0006420 AT1G10610.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0006430 AT1G23530.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0006440 AT1G60420.1 DC1 domain-containing protein Reduce transmission through pollen. The mRNA is cell-to-cell mobile. DC1 domain-containing protein;(source:Araport11) Ipc10G0006450 AT3G10500.1 NAC domain containing protein 53 Encodes a transcriptional activator that is associated with the plasma membrane in a dormant form and is proteolytically cleaved to create a form that can enter the nucleus. It is thought to promote ROS production by binding directly to the promoters of genes encoding ROS biosynthetic enzymes during drought-induced leaf senescence. The mRNA is cell-to-cell mobile. NAC domain containing protein 53;(source:Araport11) Ipc10G0006460 AT5G14670.3 0 A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1B;(source:Araport11) Ipc10G0006470 AT1G60490.1 vacuolar protein sorting 34 Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses. vacuolar protein sorting 34;(source:Araport11) Ipc10G0006480 AT1G60550.1 enoyl-CoA hydratase/isomerase D 0 enoyl-CoA hydratase/isomerase D;(source:Araport11) Ipc10G0006490 AT1G10650.1 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc10G0006500 AT5G35180.4 Protein of unknown function (DUF1336) 0 ENHANCED DISEASE RESISTANCE protein (DUF1336);(source:Araport11) Ipc10G0006510 AT2G38880.7 nuclear factor Y, subunit B1 Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance. nuclear factor Y, subunit B1;(source:Araport11) Ipc10G0006520 AT1G60790.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc10G0006530 AT1G23380.1 KNOTTED1-like homeobox gene 6 homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. homeobox protein knotted-1-like 6;(source:Araport11) Ipc10G0006540 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc10G0006550 AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 3;(source:Araport11) Ipc10G0006560 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0006570 AT3G26610.1 Pectin lyase-like superfamily protein Encodes an apoplast-localized polygalacturonase involved in cell elongation and flower development. Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0006580 AT1G10760.3 0 Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein;(source:Araport11) Ipc10G0006590 AT1G23340.2 Protein of Unknown Function (DUF239) 0 carboxyl-terminal proteinase, putative (DUF239);(source:Araport11) Ipc10G0006600 AT1G10740.4 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0006610 AT4G00700.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc10G0006620 AT4G11290.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc10G0006630 AT1G70580.4 alanine-2-oxoglutarate aminotransferase 2 Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro. alanine-2-oxoglutarate aminotransferase 2;(source:Araport11) Ipc10G0006640 AT2G42490.1 Copper amine oxidase family protein Peroxisome-localized copper amine oxidase involved in lateral root formation. Copper amine oxidase family protein;(source:Araport11) Ipc10G0006650 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc10G0006660 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc10G0006670 AT1G78570.1 rhamnose biosynthesis 1 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. rhamnose biosynthesis 1;(source:Araport11) Ipc10G0018420 AT1G07270.1 Cell division control, Cdc6 0 Cell division control, Cdc6;(source:Araport11) Ipc10G0018430 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0018440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018450 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc10G0018460 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018470 AT1G01990.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018490 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018500 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0018510 AT2G40010.1 Ribosomal protein L10 family protein 0 Ribosomal protein L10 family protein;(source:Araport11) Ipc10G0018520 AT1G07270.1 Cell division control, Cdc6 0 Cell division control, Cdc6;(source:Araport11) Ipc10G0018530 AT1G76360.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0018540 AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc10G0018550 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0018560 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018570 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018580 AT2G29670.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018590 AT5G58870.1 FTSH protease 9 encodes an FtsH protease that is localized to the chloroplast FTSH protease 9;(source:Araport11) Ipc10G0018600 AT1G56410.1 heat shock protein 70 (Hsp 70) family protein encodes a heat shock protein whose gene expression is induced by heat and dehydration. heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc10G0018610 AT1G07320.4 ribosomal protein L4 encodes a plastid ribosomal protein L4 ribosomal protein L4;(source:Araport11) Ipc10G0018620 AT3G09032.1 0 0 josephin-like protein;(source:Araport11) Ipc10G0018630 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018640 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0018650 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018660 AT1G59890.4 SIN3-like 5 0 SIN3-like 5;(source:Araport11) Ipc10G0018670 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0018680 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc10G0018690 AT1G77290.3 0 0 Glutathione S-transferase family protein;(source:Araport11) Ipc10G0018700 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018710 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0018720 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018730 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018740 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc13G0024320 AT2G43870.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0024310 AT3G59850.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0024300 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc13G0024290 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0024280 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc13G0024270 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc13G0024260 #N/A #N/A #N/A #N/A Ipc13G0024250 AT5G23750.2 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc13G0024240 AT3G48590.1 nuclear factor Y, subunit C1 Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues. nuclear factor Y, subunit C1;(source:Araport11) Ipc13G0024230 AT2G30140.1 UDP-Glycosyltransferase superfamily protein Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0024220 AT5G23860.2 tubulin beta 8 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile. tubulin beta 8;(source:Araport11) Ipc13G0024210 AT5G41190.1 0 Encodes a cytoplasmic protein with RNA endonuclease activity. Mutants display aberrant RNA processing and male and female gametophyte development. RNA-binding NOB1-like protein;(source:Araport11) Ipc13G0024200 AT1G63430.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0024190 AT5G41210.1 glutathione S-transferase THETA 1 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 1;(source:Araport11) Ipc13G0024180 AT4G11600.1 glutathione peroxidase 6 Encodes glutathione peroxidase. glutathione peroxidase 6;(source:Araport11) Ipc13G0024170 AT1G63470.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc13G0024160 AT5G40170.1 receptor like protein 54 0 receptor like protein 54;(source:Araport11) Ipc13G0024150 AT5G39600.1 0 0 39S ribosomal protein;(source:Araport11) Ipc13G0024140 AT3G11010.1 receptor like protein 34 0 receptor like protein 34;(source:Araport11) Ipc13G0024130 AT1G67440.2 0 Homolog of bacterial rsgA, functions in chloroplast ribosome biogenesis. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc13G0024120 AT3G52905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0024110 AT4G23100.3 glutamate-cysteine ligase Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective. glutamate-cysteine ligase;(source:Araport11) Ipc13G0024100 AT4G11570.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Encodes plastid localized protein involved in riboflavin biosynthesis. It dephosphorylates 5-amino-6-ribitylamino- 2,4(1H,3H) pyrimidinedione 5′-phosphate (ARPP) . Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc13G0024090 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0024080 AT4G11450.1 Protein of unknown function (DUF3527) 0 bromo-adjacent domain protein, putative (DUF3527);(source:Araport11) Ipc13G0024070 AT4G11440.2 0 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc13G0024060 AT1G16390.1 organic cation/carnitine transporter 3 0 organic cation/carnitine transporter 3;(source:Araport11) Ipc13G0024050 AT1G63640.4 0 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc13G0024040 AT5G41315.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.GL3 interacts with JAZ and DELLA proteins to regulate trichome initiation. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0024030 AT1G63660.1 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative 0 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase;(source:Araport11) Ipc13G0024020 AT2G45900.3 0 0 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11) Ipc13G0024010 AT4G23420.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0024000 AT5G41330.2 0 0 BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11) Ipc13G0023990 AT5G39960.1 GTP binding;GTP binding 0 GTP-binding protein;(source:Araport11) Ipc13G0023980 AT5G41350.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0023970 AT1G62750.1 Translation elongation factor EFG/EF2 protein Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. Translation elongation factor EFG/EF2 protein;(source:Araport11) Ipc13G0023960 AT4G12420.2 Cupredoxin superfamily protein Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. Cupredoxin superfamily protein;(source:Araport11) Ipc13G0023950 AT1G12240.1 Glycosyl hydrolases family 32 protein Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole. The mRNA is cell-to-cell mobile. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc13G0023940 AT4G22600.1 0 Encodes a protein involved in involved in the formation of the pollen surface apertures. It acts late in aperture formation by excluding specific membrane domains from exine deposition. transcription factor;(source:Araport11) Ipc13G0023930 AT1G12120.1 Plant protein of unknown function (DUF863) 0 hypothetical protein (DUF863);(source:Araport11) Ipc13G0023920 AT1G62520.1 0 0 sulfated surface-like glycoprotein;(source:Araport11) Ipc13G0023910 AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0023900 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0023890 AT5G47570.1 0 0 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit;(source:Araport11) Ipc13G0023880 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc13G0023870 AT4G16520.2 Ubiquitin-like superfamily protein Autophagy protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc13G0023860 AT2G45170.2 AUTOPHAGY 8E Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes. AUTOPHAGY 8E;(source:Araport11) Ipc13G0023850 AT4G11410.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0023840 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023830 AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0023820 AT4G17250.3 0 0 transmembrane protein;(source:Araport11) Ipc13G0023810 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023800 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023790 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023780 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023720 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023690 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023730 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023700 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023740 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023770 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023760 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023750 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023710 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023680 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023670 AT3G13380.1 BRI1-like 3 Similar to BRI, brassinosteroid receptor protein. BRI1-like 3;(source:Araport11) Ipc13G0023660 AT3G12145.1 Leucine-rich repeat (LRR) family protein A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0023650 AT2G45140.1 plant VAP homolog 12 Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. The mRNA is cell-to-cell mobile. plant VAP homolog 12;(source:Araport11) Ipc13G0023640 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0023630 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc13G0023620 AT5G47500.1 Pectin lyase-like superfamily protein predicted to encode a pectin methylesterase Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0023610 AT2G35710.1 Nucleotide-diphospho-sugar transferases superfamily protein 0 Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc13G0023600 AT2G35720.1 DNAJ heat shock N-terminal domain-containing protein Encodes OWL1, a J-domain protein involved in perception of very low light fluences. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc13G0023590 AT4G16566.3 0 Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5 Prime-phsophosulfate). This protein appears to function as a homodimer. histidine triad nucleotide-binding 4;(source:Araport11) Ipc13G0023580 AT4G16650.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0023570 AT4G17330.3 0 gene of unknown function expressed in seedlings, flower buds and stems G2484-1 protein;(source:Araport11) Ipc13G0023560 AT4G16760.1 acyl-CoA oxidase 1 Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate. acyl-CoA oxidase 1;(source:Araport11) Ipc13G0023550 AT5G47430.1 DWNN domain, a CCHC-type zinc finger 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc13G0023540 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc13G0023530 AT5G65560.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0023520 AT4G17460.1 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein Encodes a class II HD-ZIP protein that regulates meristematic activity in different tissues, and that it is necessary for the correct formation of the gynoecium. Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein;(source:Araport11) Ipc13G0023510 AT5G24080.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0023500 AT5G47360.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0023490 AT5G47310.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc13G0023480 AT4G12110.1 sterol-4alpha-methyl oxidase 1-1 Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase. sterol-4alpha-methyl oxidase 1-1;(source:Araport11) Ipc13G0023470 AT3G05740.1 RECQ helicase l1 0 RECQ helicase l1;(source:Araport11) Ipc13G0023460 AT2G27800.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0023450 AT1G05380.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc13G0023440 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc13G0023430 AT4G17530.1 RAB GTPase homolog 1C AtRabD2c encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation. RAB GTPase homolog 1C;(source:Araport11) Ipc13G0023420 AT5G61630.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0023410 AT2G35660.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc13G0023400 AT2G35660.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc13G0023390 AT4G17540.1 0 0 dynamin;(source:Araport11) Ipc13G0023380 AT5G47120.1 BAX inhibitor 1 Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. The mRNA is cell-to-cell mobile. BAX inhibitor 1;(source:Araport11) Ipc13G0023370 AT4G17570.3 GATA transcription factor 26 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 26;(source:Araport11) Ipc13G0023360 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc13G0023350 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc13G0023340 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc13G0023330 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc13G0023320 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc13G0023310 AT1G76160.1 SKU5 similar 5 0 SKU5 similar 5;(source:Araport11) Ipc13G0023300 AT5G47110.1 Chlorophyll A-B binding family protein Encodes a light-harvesting-like protein that is involved in chlorophyll and tocopherol biosynthesis anchoring geranylgeranyl reductase in the thylakoid membrane. Chlorophyll A-B binding family protein;(source:Araport11) Ipc13G0023290 AT4G17050.1 ureidoglycine aminohydrolase Encodes a protein with ureidoglycine aminohydrolase activity. ureidoglycine aminohydrolase;(source:Araport11) Ipc13G0023280 AT2G44730.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 0 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11) Ipc13G0023270 AT5G47090.2 0 0 coiled-coil protein;(source:Araport11) Ipc13G0023260 AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc13G0023250 AT3G60240.3 eukaryotic translation initiation factor 4G protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. eukaryotic translation initiation factor 4G;(source:Araport11) Ipc13G0023240 AT1G05490.1 chromatin remodeling 31 Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs. chromatin remodeling 31;(source:Araport11) Ipc13G0023230 AT5G47070.1 Protein kinase superfamily protein Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens. Protein kinase superfamily protein;(source:Araport11) Ipc13G0023220 AT5G47070.1 Protein kinase superfamily protein Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens. Protein kinase superfamily protein;(source:Araport11) Ipc13G0023210 #N/A #N/A #N/A #N/A Ipc13G0023200 AT4G17100.1 0 0 poly(U)-specific endoribonuclease-B protein;(source:Araport11) Ipc13G0023190 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0023180 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0023170 AT5G47040.1 lon protease 2 Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 2;(source:Araport11) Ipc13G0023160 AT5G47010.1 RNA helicase, putative Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. The mRNA is cell-to-cell mobile. RNA helicase;(source:Araport11) Ipc13G0023150 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc13G0023140 AT2G38740.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc13G0023130 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc13G0023120 AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc13G0023110 AT3G59840.1 0 0 allyl alcohol dehydrogenase-like protein;(source:Araport11) Ipc13G0023100 AT4G18030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0023090 AT3G55620.1 Translation initiation factor IF6 0 Translation initiation factor IF6;(source:Araport11) Ipc13G0023080 AT1G32400.3 tobamovirus multiplication 2A TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses. tobamovirus multiplication 2A;(source:Araport11) Ipc13G0023070 AT5G23710.1 DNA binding;DNA-directed RNA polymerases 0 DNA binding / DNA-directed RNA polymerase;(source:Araport11) Ipc13G0023060 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc13G0023050 AT1G29200.2 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0023040 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc13G0023030 AT1G47960.2 0 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity. cell wall / vacuolar inhibitor of fructosidase 1;(source:Araport11) Ipc13G0023020 AT1G47960.2 0 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity. cell wall / vacuolar inhibitor of fructosidase 1;(source:Araport11) Ipc13G0023010 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc13G0023000 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc13G0022990 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc13G0022980 AT4G10720.2 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc13G0022970 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0022960 AT4G10720.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc13G0022950 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0022940 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0022930 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0022920 AT4G17980.1 NAC domain containing protein 71 Encodes ANAC071, a transcription factor involved in cell proliferation in incised inflorescence stems. NAC domain containing protein 71;(source:Araport11) Ipc13G0022910 AT2G35330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0022900 AT5G42965.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0022890 AT1G32540.3 lsd one like 1 Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death. lsd one like 1;(source:Araport11) Ipc13G0022880 AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein Encodes FdC2, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI. 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc13G0022870 AT4G17950.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc13G0022860 AT2G35290.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0022850 AT2G35270.1 Predicted AT-hook DNA-binding family protein Direct target of AGAMOUS. Regulates patterning and differentiation of reproductive organs. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc13G0022840 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc13G0022830 AT5G46800.3 0 Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein Mitochondrial substrate carrier family protein;(source:Araport11) Ipc13G0022820 AT4G17870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc13G0022810 AT1G32610.2 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0022800 AT1G32630.2 0 0 FAM50A-like protein;(source:Araport11) Ipc13G0022790 AT2G35215.1 0 0 plant/protein;(source:Araport11) Ipc13G0022780 AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC4 is bHLH transcriptional regulator. It functions as a JAZ-interacting transcription factor that acts together with MYC2 and MYC3 to activate JA-responses. It also functions in blue light mediated secondary cell wall biogenesis via regulation of NST1 expression. MYC4 directly binds to NST1 promoter and activates its expression. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc13G0022770 AT5G46750.1 ARF-GAP domain 9 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. The mRNA is cell-to-cell mobile. ARF-GAP domain 9;(source:Araport11) Ipc13G0022760 AT5G47740.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc13G0022750 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc13G0022740 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0022730 AT4G17250.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0022720 AT1G32690.1 0 0 DUF740 family protein;(source:Araport11) Ipc13G0022710 AT2G25680.1 molybdate transporter 1 Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium. molybdate transporter 1;(source:Araport11) Ipc13G0022700 AT5G16770.4 0 Member of the R2R3 factor gene family. myb domain protein 9;(source:Araport11) Ipc13G0022690 AT4G17770.2 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.The mRNA is cell-to-cell mobile. trehalose phosphatase/synthase 5;(source:Araport11) Ipc13G0022680 AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein A member of the RPD gene family - there are13 annotated genes and one EST encoding RPD1-like proteins in Arabidopsis. Shows no homology to any protein of known function. Abundant expression found in the shoot apex and the root. rpd1 mutant is a temperature-sensitive mutant isolated on the basis of the impairment in adventitious roots formation in hypocotyl region. Also, disruption of the RPD1 gene by a T-DNA insertion caused embryogenesis arrest at the globular to transition stages. This phenotype is consistent with the hypothesized function of RPD1 in the maintenance of active cell proliferation. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc13G0022670 AT1G32330.2 0 Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2. heat shock transcription factor A1D;(source:Araport11) Ipc13G0022660 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022650 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022640 AT1G60110.2 0 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc13G0022620 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc13G0022630 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022610 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022600 AT1G32310.1 0 Encodes a plant-specific negative regulator of the APC/C complex. It is expressed during embryogenesis and early plant development and plays a key role in organ size control. Mutants are defective in mitosis I of pollen development, resulting in pollen without sperm nuclei. valine-tRNA ligase;(source:Araport11) Ipc13G0022590 AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0022580 AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0022570 AT3G55370.1 OBF-binding protein 3 Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. OBF-binding protein 3;(source:Araport11) Ipc13G0022560 AT2G37585.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Encodes GlcAT14C. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans. Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc13G0022550 AT2G37580.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0022540 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0022530 AT5G41650.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Responds to NaCl stress. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc13G0022520 AT2G46260.1 BTB/POZ/Kelch-associated protein Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. BTB/POZ/Kelch-associated protein;(source:Araport11) Ipc13G0022510 AT2G04520.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0022500 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022490 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022480 AT4G17250.3 0 0 transmembrane protein;(source:Araport11) Ipc13G0022470 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022460 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc13G0022450 AT3G24255.3 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc13G0022440 AT5G28740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0022430 AT3G28700.1 Protein of unknown function (DUF185) 0 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185);(source:Araport11) Ipc13G0022420 AT3G12580.1 heat shock protein 70 0 heat shock protein 70;(source:Araport11) Ipc13G0022410 AT3G12587.1 Oligosaccaryltransferase 0 Oligosaccaryltransferase;(source:Araport11) Ipc13G0022400 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc13G0022390 AT5G59970.2 0 0 Histone superfamily protein;(source:Araport11) Ipc13G0022380 AT1G53645.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0022370 AT2G37550.2 ARF-GAP domain 7 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. ARF-GAP domain 7;(source:Araport11) Ipc13G0022360 AT2G30410.3 0 mutant has embryo defect; enlarged embryo cells and endosperm nuclei; Tubulin Folding Cofactor A tubulin folding cofactor A (KIESEL);(source:Araport11) Ipc13G0022350 AT1G73460.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0022340 AT5G02540.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0022330 #N/A #N/A #N/A #N/A Ipc13G0022320 AT3G09470.2 Major facilitator superfamily protein Protein similar to UNC93 of C.elegans. Mutants are hypersensitive to ABA treatment and salt sensitive and have disregulated K+ accumulation. Major facilitator superfamily protein;(source:Araport11) Ipc13G0022310 AT4G11420.1 eukaryotic translation initiation factor 3A Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits. eukaryotic translation initiation factor 3A;(source:Araport11) Ipc13G0022300 AT5G04410.1 NAC domain containing protein 2 NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light. The mRNA is cell-to-cell mobile. NAC domain containing protein 2;(source:Araport11) Ipc13G0022290 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0022280 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0022270 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0022260 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0022250 AT5G59890.1 actin depolymerizing factor 4 actin depolymerizing factor 4 (ADF4) mRNA, complete cds actin depolymerizing factor 4;(source:Araport11) Ipc13G0022240 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc13G0022230 AT3G11010.5 0 0 receptor like protein 34;(source:Araport11) Ipc13G0022220 AT1G45616.1 receptor like protein 6 0 receptor like protein 6;(source:Araport11) Ipc13G0022210 AT2G37500.2 arginine biosynthesis protein ArgJ family 0 arginine biosynthesis protein ArgJ family;(source:Araport11) Ipc13G0022200 AT2G37480.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0022190 AT3G53620.1 pyrophosphorylase 4 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. The mRNA is cell-to-cell mobile. pyrophosphorylase 4;(source:Araport11) Ipc13G0022180 AT2G37460.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc13G0022170 AT3G03640.1 beta glucosidase 25 Encodes beta-glucosidase (GLUC). beta glucosidase 25;(source:Araport11) Ipc13G0022160 AT1G06430.3 0 encodes a FtsH protease that is localized to the chloroplast FTSH protease 8;(source:Araport11) Ipc13G0022150 AT4G29920.2 0 Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Loss of function mutants show increased sensitivity to salt stress and drought. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0022140 AT4G33010.1 glycine decarboxylase P-protein 1 0 glycine decarboxylase P-protein 1;(source:Araport11) Ipc13G0022130 AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0022120 AT2G37390.1 Chloroplast-targeted copper chaperone protein 0 Chloroplast-targeted copper chaperone protein;(source:Araport11) Ipc13G0022110 AT3G53520.1 UDP-glucuronic acid decarboxylase 1 Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT analysis. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-glucuronic acid decarboxylase 1;(source:Araport11) Ipc13G0022100 AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH);(source:Araport11) Ipc13G0022090 AT2G41473.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc13G0022080 AT3G20770.1 Ethylene insensitive 3 family protein Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores. Ethylene insensitive 3 family protein;(source:Araport11) Ipc13G0022070 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022060 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022040 AT1G29500.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022030 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022020 AT1G29500.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022010 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022000 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021990 AT1G29500.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0022050 AT1G29500.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021830 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021980 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021960 AT5G27780.1 SAUR-like auxin-responsive protein family SAUR75 expression is induced during pollination and expressed in pollen tubes. SAUR75 likely functions in translation of proteins required for pollen tube development/function. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021900 AT5G18080.1 SAUR-like auxin-responsive protein family Encodes SAUR24 (small auxin up RNA 24). Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223–1235 (PMID:21327815), SAUR24 is At5g18010. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021870 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021840 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021940 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021970 AT5G27780.1 SAUR-like auxin-responsive protein family SAUR75 expression is induced during pollination and expressed in pollen tubes. SAUR75 likely functions in translation of proteins required for pollen tube development/function. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021910 AT5G18080.1 SAUR-like auxin-responsive protein family Encodes SAUR24 (small auxin up RNA 24). Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223–1235 (PMID:21327815), SAUR24 is At5g18010. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021880 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021850 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021950 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021930 AT5G27780.1 SAUR-like auxin-responsive protein family SAUR75 expression is induced during pollination and expressed in pollen tubes. SAUR75 likely functions in translation of proteins required for pollen tube development/function. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021920 AT5G18080.1 SAUR-like auxin-responsive protein family Encodes SAUR24 (small auxin up RNA 24). Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223–1235 (PMID:21327815), SAUR24 is At5g18010. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021890 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021860 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021820 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021810 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021800 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0021790 AT4G18596.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc13G0021780 AT1G16350.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc13G0021770 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021760 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021750 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021740 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc13G0021730 AT1G29490.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021720 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc13G0021710 AT5G27780.1 SAUR-like auxin-responsive protein family SAUR75 expression is induced during pollination and expressed in pollen tubes. SAUR75 likely functions in translation of proteins required for pollen tube development/function. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021700 AT1G29460.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021690 AT3G33520.1 actin-related protein 6 Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin. actin-related protein 6;(source:Araport11) Ipc13G0021680 AT3G33520.1 actin-related protein 6 Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin. actin-related protein 6;(source:Araport11) Ipc13G0021670 #N/A #N/A #N/A #N/A Ipc13G0021660 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021650 AT1G29510.1 SAUR-like auxin-responsive protein family This locus was referred to as SAUR68 in PMID:17948056 but the nomenclature should be SAUR67. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021640 AT5G18020.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021630 AT5G18030.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0021620 AT2G27110.2 FAR1-related sequence 3 0 FAR1-related sequence 3;(source:Araport11) Ipc13G0021610 AT3G54320.1 Integrase-type DNA-binding superfamily protein WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc06G0016000 AT1G30140.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0015990 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc06G0015980 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0015970 AT4G20220.1 Reverse transcriptase (RNA-dependent DNA polymerase) 0 Reverse transcriptase (RNA-dependent DNA polymerase);(source:Araport11) Ipc06G0015960 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0015950 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0015940 AT1G08380.1 photosystem I subunit O Encodes subunit O of photosystem I. photosystem I subunit O;(source:Araport11) Ipc06G0015930 AT1G08370.1 decapping 1 Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2. decapping 1;(source:Araport11) Ipc06G0015920 AT3G04820.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc06G0015910 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0015900 AT3G01780.1 ARM repeat superfamily protein Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position. ARM repeat superfamily protein;(source:Araport11) Ipc06G0015890 AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc06G0015880 AT5G64140.1 ribosomal protein S28 Encodes a putative ribosomal protein S28. ribosomal protein S28;(source:Araport11) Ipc06G0015870 #N/A #N/A #N/A #N/A Ipc06G0015860 AT2G27460.1 sec23/sec24 transport family protein Sec23 homolog , forms a distinct clade with SEC23A.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation. sec23/sec24 transport family protein;(source:Araport11) Ipc06G0015850 AT2G27480.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc06G0015840 AT2G27500.2 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc06G0015830 AT2G27510.1 ferredoxin 3 0 ferredoxin 3;(source:Araport11) Ipc06G0015820 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0015810 AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein 0 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein;(source:Araport11) Ipc06G0015800 AT3G52740.1 0 Plant specific protein.BIC1 and BIC2 inhibit cryptochrome function by blocking blue light-dependent cryptochrome dimerization.Light activated transcription of BICs is mediated by cryptochromes. hypothetical protein;(source:Araport11) Ipc06G0015790 AT1G08350.3 0 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc06G0015780 AT1G67190.2 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc06G0015770 AT1G08320.4 0 0 bZIP transcription factor family protein;(source:Araport11) Ipc06G0015760 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc06G0015750 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0015740 AT5G42965.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0015730 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc06G0015720 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc06G0015710 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc06G0015700 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc06G0015690 AT3G48520.1 cytochrome P450, family 94, subfamily B, polypeptide 3 CYP94B3 is a jasmonoyl-isoleucine-12-hydroxylase that catalyzes the formation of 12-OH-JA-Ile from JA-Ile. By reducing the levels of this the biologically active phytohormone, CYP94B3 attenuates the jasmonic acid signaling cascade. CYP94B3 transcript levels rise in response to wounding. cytochrome P450, family 94, subfamily B, polypeptide 3;(source:Araport11) Ipc06G0015680 AT5G22460.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0015670 AT3G11820.1 syntaxin of plants 121 Encodes a syntaxin localized at the plasma membrane. SYR1/PEN1 is a member of the SNARE superfamily and functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew. It is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. The syp121 point mutation results in stomatal phenotypes that reduce CO2 assimilation, slow vegetative growth and increase water use efficiency in the whole plant, conditional upon high light intensities and low relative humidity. The R20R21 motif of SYP121 are essential for SEC11 interaction. Mutation of the R20R21 motif blocks vesicle traffic without uncoupling the effects of SYP121 on solute and K+ uptake associated with the F9xRF motif; the mutation also mimicks the effects on traffic block observed on coexpression of the dominant negative SEC11?149 fragment. syntaxin of plants 121;(source:Araport11) Ipc06G0015660 AT4G31240.2 protein kinase C-like zinc finger protein 0 protein kinase C-like zinc finger protein;(source:Araport11) Ipc06G0015650 AT5G22470.1 NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases PARP3 is one of three canonical PARPs in Arabidopsis. poly ADP-ribose polymerase 3;(source:Araport11) Ipc06G0015640 AT2G27590.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc06G0015630 AT2G27600.1 AAA-type ATPase family protein Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function. The mRNA is cell-to-cell mobile. AAA-type ATPase family protein;(source:Araport11) Ipc06G0015620 AT4G21740.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0015610 AT2G04160.1 Subtilisin-like serine endopeptidase family protein isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc06G0015600 AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc06G0015590 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0015580 AT3G44530.4 0 Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. It is a part of the HISTONE REGULATOR complex that deposits histones in a DNA synthesis-independent manner and affects both nucleosome occupancy and the maintenance of transcriptional silencing. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2. histone chaperone HIRA-like protein;(source:Araport11) Ipc06G0015570 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc06G0015560 AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc06G0015550 AT2G01350.1 quinolinate phoshoribosyltransferase At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli. quinolinate phoshoribosyltransferase;(source:Araport11) Ipc06G0015540 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0015530 AT3G07290.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc06G0015520 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0015510 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc06G0015500 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc06G0015490 AT2G07760.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0015480 AT3G12620.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc06G0015470 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc06G0015460 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0015450 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc06G0015440 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0015430 AT1G08260.1 DNA polymerase epsilon catalytic subunit Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. DNA polymerase epsilon catalytic subunit;(source:Araport11) Ipc06G0015420 AT3G44590.2 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc06G0015410 AT3G44610.1 Protein kinase superfamily protein Kinase involved in the first positive phototropism and gravitropism. Phosphorylates serine residues in the cytoplasmic loop of PIN1 and shares phosphosite preferences with D6PK. Critical component for both hypocotyl phototropism and gravitropism, control tropic responses mainly through regulation of PIN-mediated auxin transport by protein phosphorylation. Protein kinase superfamily protein;(source:Araport11) Ipc06G0015400 AT3G44620.1 protein tyrosine phosphatases;protein tyrosine phosphatases 0 protein-tyrosine phosphatase;(source:Araport11) Ipc06G0015390 AT4G21105.3 0 0 cytochrome-c oxidase/ electron carrier;(source:Araport11) Ipc06G0015380 AT2G27740.1 Family of unknown function (DUF662) 0 RAB6-interacting golgin (DUF662);(source:Araport11) Ipc06G0015370 AT4G25470.1 C-repeat/DRE binding factor 2 Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway. C-repeat/DRE binding factor 2;(source:Araport11) Ipc06G0015360 #N/A #N/A #N/A #N/A Ipc06G0015350 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0015340 AT2G27810.1 nucleobase-ascorbate transporter 12 Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter. nucleobase-ascorbate transporter 12;(source:Araport11) Ipc06G0015330 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0015320 AT5G22640.1 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis. The mRNA is cell-to-cell mobile. MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein;(source:Araport11) Ipc06G0015310 AT2G27830.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0015300 AT2G27830.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0003910 AT4G13710.2 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0003920 AT4G13720.2 0 0 Inosine triphosphate pyrophosphatase family protein;(source:Araport11) Ipc01G0003930 AT3G24240.1 Leucine-rich repeat receptor-like protein kinase family protein RGFR1 is a leucine-­rich repeat receptor kinase that, together with RGFR2 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc01G0003940 AT1G04670.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0003950 AT5G61030.2 0 Encodes a glycine-rich RNA binding protein that is involved in C-> U RNA editing in mitochondria. Gene expression is induced by cold.The mRNA is cell-to-cell mobile. glycine-rich RNA-binding protein 3;(source:Araport11) Ipc01G0003960 AT1G04650.1 0 FLIP is a member of a conserved gene family with wide distribution across taxa. In Arabidopsis, it forms a complex with FIGL1 regulates meiotic crossover formation via RAD51 and DMC1. holliday junction resolvase;(source:Araport11) Ipc01G0003970 AT3G24060.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc01G0003980 AT4G36350.1 purple acid phosphatase 25 0 purple acid phosphatase 25;(source:Araport11) Ipc01G0004000 AT2G33170.2 0 0 Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc01G0003990 AT5G26680.1 5'-3' exonuclease family protein Encodes a FEN1 homolog that has double-flap endonuclease activity, weak GEN activity towards bubble DNA structures and flap endonuclease activity towards substrates with a single-flap structure, but lacks the 5′ exonuclease activity towards DNA substrates with a nick on one strand, and GEN activity towards gapped DNA without any flap. It is expressed in rapidly dividing cells and mutants have smaller roots and hypocotyls. 5-3 exonuclease family protein;(source:Araport11) Ipc01G0004010 AT5G63930.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0004020 AT5G63930.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0004030 AT3G24050.1 GATA transcription factor 1 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 1;(source:Araport11) Ipc01G0004040 AT3G01400.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0004050 AT3G24030.1 hydroxyethylthiazole kinase family protein 0 hydroxyethylthiazole kinase family protein;(source:Araport11) Ipc01G0004060 AT4G13580.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc01G0004070 AT2G33205.1 Serinc-domain containing serine and sphingolipid biosynthesis protein 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc01G0004080 AT2G33220.1 GRIM-19 protein 0 GRIM-19 protein;(source:Araport11) Ipc01G0004090 AT1G04600.1 myosin XI A member of Myosin-like proteins myosin XI A;(source:Araport11) Ipc01G0004100 AT2G37125.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0004110 AT4G13550.2 0 Heat stress inducible plastid monogalactosyldiacylglycerol lipase. putative triglyceride lipase;(source:Araport11) Ipc01G0004120 AT4G13560.2 0 0 Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) Ipc01G0004130 AT3G23920.1 beta-amylase 1 Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.Activity of BAM1 increases 4 days after osmotic stress. BAM1 has a higher temperature optimum than BAM3 (PMID:25293962). beta-amylase 1;(source:Araport11) Ipc01G0004140 AT1G04140.1 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0004150 AT4G17740.2 Peptidase S41 family protein 0 Peptidase S41 family protein;(source:Araport11) Ipc01G0004160 AT4G13510.1 ammonium transporter 1;1 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. The mRNA is cell-to-cell mobile. ammonium transporter 1;(source:Araport11) Ipc01G0004170 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc01G0004180 AT1G04560.1 AWPM-19-like family protein 0 AWPM-19-like family protein;(source:Araport11) Ipc01G0004190 AT5G13930.1 Chalcone and stilbene synthase family protein Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. The mRNA is cell-to-cell mobile. Chalcone and stilbene synthase family protein;(source:Araport11) Ipc01G0004200 AT4G13460.2 SU(VAR)3-9 homolog 9 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. SU(VAR)3-9 homolog 9;(source:Araport11) Ipc01G0004210 AT1G04555.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0004220 #N/A #N/A #N/A #N/A Ipc01G0004230 AT4G13440.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc01G0004240 AT4G13440.2 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc01G0004250 AT3G21120.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0004260 AT4G13440.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc01G0004270 AT3G24320.1 MUTL protein homolog 1 Encodes a DNA binding protein that promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation. Plastid MSH1 depletion results in variegation, abiotic stress tolerance, variable growth rate, and delayed maturity. MUTL protein homolog 1;(source:Araport11) Ipc01G0004280 AT4G13430.1 isopropyl malate isomerase large subunit 1 Encodes a methylthioalkylmalate isomerase involved in glucosinolate biosynthesis. isopropyl malate isomerase large subunit 1;(source:Araport11) Ipc01G0004290 AT2G33310.2 auxin-induced protein 13 Auxin induced gene, IAA13 (IAA13). auxin-induced protein 13;(source:Araport11) Ipc01G0004300 AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0004310 AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc01G0004320 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004330 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004340 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004350 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004360 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004370 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004380 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004390 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004400 AT1G24020.2 MLP-like protein 423 0 MLP-like protein 423;(source:Araport11) Ipc01G0004410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0004420 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0004430 AT5G43970.1 translocase of outer membrane 22-V Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion. translocase of outer membrane 22-V;(source:Araport11) Ipc01G0004440 AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0004450 AT5G40020.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc01G0004460 AT1G04520.1 plasmodesmata-located protein 2 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. plasmodesmata-located protein 2;(source:Araport11) Ipc01G0004470 AT2G05590.2 TLD-domain containing nucleolar protein 0 TLD-domain containing nucleolar protein;(source:Araport11) Ipc01G0004480 AT2G33340.2 MOS4-associated complex 3B Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity. MOS4-associated complex 3B;(source:Araport11) Ipc01G0004490 AT1G04500.3 0 0 CCT motif family protein;(source:Araport11) Ipc01G0004500 AT2G33360.2 Protein of unknown function (DUF3527) 0 cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527);(source:Araport11) Ipc01G0004510 AT4G26740.1 seed gene 1 Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes. peroxygenase 1;(source:Araport11) Ipc01G0004520 AT5G35620.3 0 Cap-binding protein, binds to the 5 Prime cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. Eukaryotic initiation factor 4E protein;(source:Araport11) Ipc01G0004530 AT5G13890.3 Family of unknown function (DUF716) 0 plant viral-response family protein (DUF716);(source:Araport11) Ipc01G0004540 AT5G49410.2 0 0 thiamine-phosphate synthase;(source:Araport11) Ipc01G0004550 AT2G33390.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0004560 AT2G33400.1 0 0 FK506-binding nuclear-like protein;(source:Araport11) Ipc01G0004570 AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. The mRNA is cell-to-cell mobile. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0004580 AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase 0 Cyclopropane-fatty-acyl-phospholipid synthase;(source:Araport11) Ipc01G0004590 AT1G64790.3 0 ILITHYIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color. Required for bacterium-triggered stomatal closure. ILITYHIA;(source:Araport11) Ipc01G0004600 AT2G33420.1 Protein of unknown function (DUF810) 0 hypothetical protein (DUF810);(source:Araport11) Ipc01G0004610 AT5G46050.1 peptide transporter 3 Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies. peptide transporter 3;(source:Araport11) Ipc01G0004620 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc01G0004630 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc01G0004640 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc01G0004650 AT1G14730.1 Cytochrome b561/ferric reductase transmembrane protein family 0 Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc01G0004660 AT3G23490.2 0 Encodes a cyanase that catalyzes the bicarbonate-dependent breakdown of cyanate to ammonia and bicarbonate. CYN forms a hexadecamer and is believed to be a cytosolic protein. Long-term exposure to NaCl increases CYN transcript levels. It is also expressed at higher levels in flowers relative to stems, roots, and seedlings. cyanase;(source:Araport11) Ipc01G0004670 AT1G14860.1 nudix hydrolase homolog 18 0 nudix hydrolase homolog 18;(source:Araport11) Ipc01G0004680 AT2G33435.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0004690 AT4G28600.2 0 encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. no pollen germination related 2;(source:Araport11) Ipc01G0004700 #N/A #N/A #N/A #N/A Ipc01G0004710 AT4G14310.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0004720 AT4G05320.8 0 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc01G0004730 AT4G05050.3 ubiquitin 11 polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene. ubiquitin 11;(source:Araport11) Ipc01G0004740 AT2G32210.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc01G0004750 AT3G23360.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0004760 AT5G43310.2 COP1-interacting protein-related 0 COP1-interacting protein-like protein;(source:Araport11) Ipc01G0004770 AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0004780 AT3G23325.1 Splicing factor 3B subunit 5/RDS3 complex subunit 10 0 Splicing factor 3B subunit 5/RDS3 complex subunit 10;(source:Araport11) Ipc01G0004790 AT4G14350.4 0 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc01G0004800 AT1G04430.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0004810 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0004820 AT1G04430.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0004830 AT1G07090.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc01G0004840 AT3G23280.2 XB3 ortholog 5 in Arabidopsis thaliana Encodes a ubiquitin ligase that is a novel player in ethylene signaling involved in negatively regulating apical hook curvature, with alternative splicing controlling dual targeting to the nuclear and cytoplasmic compartments. hypothetical protein;(source:Araport11) Ipc01G0004850 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0004860 AT5G43330.1 Lactate/malate dehydrogenase family protein predicted to encode a cytosolic malate dehydrogenase. The mRNA is cell-to-cell mobile. Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc01G0004870 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc01G0004880 AT4G14385.1 0 0 histone acetyltransferase subunit NuA4-domain protein;(source:Araport11) Ipc01G0004890 AT2G31200.1 actin depolymerizing factor 6 Encodes actin depolymerizing factor 6 (ADF6). The mRNA is cell-to-cell mobile. actin depolymerizing factor 6;(source:Araport11) Ipc01G0004900 AT1G04400.2 cryptochrome 2 Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus.The life-time of cry2 signaling state in situ (in planta) is about 16 min. cryptochrome 2;(source:Araport11) Ipc01G0004910 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc01G0004920 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc01G0004930 AT5G39190.1 germin-like protein 2 germin-like protein (GLP2a) germin-like protein 2;(source:Araport11) Ipc01G0004940 AT5G39190.1 germin-like protein 2 germin-like protein (GLP2a) germin-like protein 2;(source:Araport11) Ipc01G0004950 AT5G39150.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc01G0004960 AT5G39150.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc01G0004970 AT5G39150.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc01G0004980 AT5G43400.1 Uncharacterised conserved protein UCP015417, vWA 0 plant/protein;(source:Araport11) Ipc01G0004990 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc01G0005000 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0005010 AT3G23230.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0005020 AT5G43420.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0005030 AT5G43430.1 electron transfer flavoprotein beta Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation. electron transfer flavoprotein beta;(source:Araport11) Ipc01G0005040 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0005050 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0005060 AT1G04340.1 HR-like lesion-inducing protein-related 0 HR-like lesion-inducing protein-like protein;(source:Araport11) Ipc01G0005070 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0005080 AT1G04330.1 0 A proline/serine rich protein of unknown function. It interacts with defense related MAP kinase MPK6 and others. May be involved in signaling during defense or stress response. hypothetical protein;(source:Araport11) Ipc01G0005090 AT3G23160.1 Protein of unknown function (DUF668) 0 plant/protein (DUF668);(source:Araport11) Ipc01G0005100 AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Involved in ethylene perception in Arabidopsis The mRNA is cell-to-cell mobile. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc01G0005110 AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein Ortholog of maize IPE1 gene which is involved in pollen exine development. Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc01G0005120 AT2G20960.4 0 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc01G0005130 AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc01G0005140 AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein Flower-specific gene controlling the boundary of the stamen and carpel whorls. Similar to zinc finger transcription factors. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc01G0005150 AT4G24010.1 cellulose synthase like G1 encodes a protein similar to cellulose synthase cellulose synthase like G1;(source:Araport11) Ipc01G0005160 AT1G04300.1 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc01G0005170 AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860. Serine protease inhibitor, potato inhibitor I-type family protein;(source:Araport11) Ipc02G0028500 AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc02G0028490 AT1G28560.3 0 Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation. snRNA activating complex family protein;(source:Araport11) Ipc02G0028480 AT1G79940.3 DnaJ / Sec63 Brl domains-containing protein J domain protein localized in ER membrane. Mutants have defective pollen germination. DnaJ / Sec63 Brl domains-containing protein;(source:Araport11) Ipc02G0028470 AT5G49150.8 0 Encodes a transmembrane domain containing protein expressed in sperm cells. Target promoter of the male germline-specific transcription factor DUO1. gamete expressed 2;(source:Araport11) Ipc02G0028460 AT3G11440.4 0 Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures. myb domain protein 65;(source:Araport11) Ipc02G0028450 AT2G27110.3 FAR1-related sequence 3 0 FAR1-related sequence 3;(source:Araport11) Ipc02G0028440 AT5G23690.1 Polynucleotide adenylyltransferase family protein 0 Polynucleotide adenylyltransferase family protein;(source:Araport11) Ipc02G0028430 AT4G11260.1 phosphatase-related Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. phosphatase-like protein;(source:Araport11) Ipc02G0028420 AT1G51160.3 0 TRAPP protein BET5 homolog. SNARE-like superfamily protein;(source:Araport11) Ipc02G0028410 AT5G52530.3 dentin sialophosphoprotein-related 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc02G0028400 AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf106 HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB The mRNA is cell-to-cell mobile. Bacterial sec-independent translocation protein mttA/Hcf106;(source:Araport11) Ipc02G0028390 AT5G52430.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0028380 AT1G02260.2 0 0 Divalent ion symporter;(source:Araport11) Ipc02G0028370 AT4G25610.3 0 0 C2H2-like zinc finger protein;(source:Araport11) Ipc02G0028360 AT1G34270.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc02G0028350 AT5G23910.2 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc02G0028340 AT1G77860.2 0 mutant has Altered morphology of pollen exine wall; Seven-Path Transmembrane Protein Rhomboid-related intramembrane serine protease family protein;(source:Araport11) Ipc02G0028330 AT5G18130.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0028320 AT3G20015.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0028310 AT3G53740.4 Ribosomal protein L36e family protein 0 Ribosomal protein L36e family protein;(source:Araport11) Ipc02G0028300 AT3G48990.1 AMP-dependent synthetase and ligase family protein Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc02G0028290 AT5G52300.2 CAP160 protein Encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and desiccation. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. CAP160 protein;(source:Araport11) Ipc02G0028280 AT5G23750.2 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc02G0028270 AT3G61250.1 myb domain protein 17 LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family. myb domain protein 17;(source:Araport11) Ipc02G0028260 AT3G01380.2 0 0 sulfatase and phosphatidylinositolglycan class N domain-containing protein;(source:Araport11) Ipc02G0028250 AT5G52270.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc02G0028240 AT5G52780.1 Protein of unknown function (DUF3464) 0 transmembrane protein, putative (DUF3464);(source:Araport11) Ipc02G0028230 AT1G01490.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc02G0028220 AT1G01540.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0028210 AT4G25700.1 beta-hydroxylase 1 Converts beta-carotene to zeaxanthin via cryptoxanthin. beta-hydroxylase 1;(source:Araport11) Ipc02G0028200 AT5G24000.1 Protein of unknown function (DUF819) 0 keratin-associated protein (DUF819);(source:Araport11) Ipc02G0028190 AT5G52545.2 0 0 RNA-binding protein-like RNA recognition motif protein;(source:Araport11) Ipc02G0028180 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc02G0028170 AT4G25660.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc02G0028160 AT4G25670.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc02G0028150 AT5G24020.1 septum site-determining protein (MIND) Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor. septum site-determining protein (MIND);(source:Araport11) Ipc02G0028140 AT4G28000.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0028130 AT5G24080.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0028120 AT1G64140.1 0 0 WRKY transcription factor;(source:Araport11) Ipc02G0028110 AT5G53340.1 Galactosyltransferase family protein Encodes a hydroxyproline O-galactosyltransferase. Galactosyltransferase family protein;(source:Araport11) Ipc02G0028100 AT4G16444.1 0 GET1 membrane receptor homolog . ER localized protein that Interacts with GET3a. Disruption of both genes results in a decreased membrane localization of the SNARE proteinSYP123 and defects in root hair elongation. tail-anchored protein insertion receptor WRB-like protein;(source:Araport11) Ipc02G0028090 AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein 0 Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11) Ipc02G0028080 AT1G79740.3 0 0 hAT transposon superfamily;(source:Araport11) Ipc02G0028070 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0028060 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0028050 AT5G53300.4 ubiquitin-conjugating enzyme 10 Encodes a ubiquitin conjugating enzyme. ubiquitin-conjugating enzyme 10;(source:Araport11) Ipc02G0028040 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc02G0028030 AT5G53210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. Its transcript levels change after inducing MUTE expression in a mute background. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0028020 AT5G24110.1 WRKY DNA-binding protein 30 member of WRKY Transcription Factor; Group III WRKY DNA-binding protein 30;(source:Araport11) Ipc02G0028010 AT5G24120.3 0 Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes. sigma factor E;(source:Araport11) Ipc02G0028000 AT5G24130.1 0 0 polypyrimidine tract-binding-like protein;(source:Araport11) Ipc02G0027990 AT5G59780.2 myb domain protein 59 Encodes a putative transcription factor (MYB59). In roots it is involved in K+/NO3- transport and expression of the NPF7.3 transporter. myb domain protein 59;(source:Araport11) Ipc02G0027980 AT5G53180.1 polypyrimidine tract-binding protein 2 Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination. polypyrimidine tract-binding protein 2;(source:Araport11) Ipc02G0027970 AT5G53120.5 spermidine synthase 3 encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. spermidine synthase 3;(source:Araport11) Ipc02G0027960 AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0027950 AT1G66920.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027940 AT5G24170.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc02G0027930 AT5G53420.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc02G0027920 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc02G0027910 AT5G53370.1 pectin methylesterase PCR fragment F 0 pectin methylesterase PCR fragment F;(source:Araport11) Ipc02G0027900 AT3G49240.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes NUWA, an imprinted gene that controls mitochondrial function in early seed development. It is expressed in both the mitochondrion and chloroplast and is also involved in RNA editing in the mitochondrion and chloroplast as a core member of E+-type PPR editosomes. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0027890 AT3G61790.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc02G0027880 AT4G00990.1 Transcription factor jumonji (jmjC) domain-containing protein jJumonji-domain-containing H3K9 histone demethylase. Loss of function mutants are susceptible to bacterial infection and early flowering. Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc02G0027870 AT3G49250.1 defective in meristem silencing 3 Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation. defective in meristem silencing 3;(source:Araport11) Ipc02G0027860 AT3G49260.3 IQ-domain 21 0 IQ-domain 21;(source:Araport11) Ipc02G0027850 AT5G53480.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0027840 AT4G27790.1 Calcium-binding EF hand family protein 0 Calcium-binding EF hand family protein;(source:Araport11) Ipc02G0027830 AT5G24330.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR6 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. TRITHORAX-RELATED PROTEIN 6;(source:Araport11) Ipc02G0027820 AT5G24340.1 3'-5' exonuclease domain-containing protein 0 3-5 exonuclease domain-containing protein;(source:Araport11) Ipc02G0027810 AT3G61850.5 0 Zinc finger transcription factor of the Dof family involved in the control of seed germination. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc02G0027800 AT4G27750.1 binding A genetic locus involved in sugar sensing and coordinating carbohydrate synthesis and utilization by the whole plant. Lines carrying mutations in this gene shows restricted carbohydrate allocation to plant growth and seed set, elevated chlorophyll levels, and reduced sugar induction of starch biosynthesis. binding protein;(source:Araport11) Ipc02G0027790 AT4G27745.4 0 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc02G0027780 AT4G27720.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0027770 AT3G45970.1 expansin-like A1 member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) The mRNA is cell-to-cell mobile. expansin-like A1;(source:Araport11) Ipc02G0027760 AT2G46620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0027750 AT4G27680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0027740 AT5G53550.6 0 0 YELLOW STRIPE like 3;(source:Araport11) Ipc02G0027730 AT3G15040.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc02G0027720 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc02G0027710 AT2G46680.1 homeobox 7 encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response. homeobox 7;(source:Araport11) Ipc02G0027700 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0027690 AT5G38260.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027680 AT5G38260.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027670 AT1G66920.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027660 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc02G0027640 AT1G66930.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027650 AT1G66920.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027630 AT1G66910.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027620 AT1G66910.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027610 AT2G46690.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0027600 AT2G46690.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0027590 AT5G24430.1 Calcium-dependent protein kinase (CDPK) family protein 0 Calcium-dependent protein kinase (CDPK) family protein;(source:Araport11) Ipc02G0027580 AT1G01110.2 IQ-domain 18 0 IQ-domain 18;(source:Araport11) Ipc02G0027570 AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein membrane related protein CP5 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc02G0027560 AT4G10520.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc02G0027550 AT1G32960.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc02G0027540 AT4G10520.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc02G0027530 AT5G24490.1 30S ribosomal protein, putative 0 30S ribosomal protein;(source:Araport11) Ipc02G0027520 AT5G24470.1 pseudo-response regulator 5 Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY. two-component response regulator-like protein;(source:Araport11) Ipc02G0027510 AT5G24460.1 0 0 RING-H2 zinc finger protein;(source:Araport11) Ipc02G0027500 AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0027490 AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0027480 AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2 0 nascent polypeptide-associated complex subunit alpha-like protein 2;(source:Araport11) Ipc02G0027470 AT5G24590.2 TCV-interacting protein Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. TCV-interacting protein;(source:Araport11) Ipc02G0027460 AT1G15460.3 0 Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions. HCO3- transporter family;(source:Araport11) Ipc02G0027450 AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family 0 Calcium-binding endonuclease/exonuclease/phosphatase family;(source:Araport11) Ipc02G0027440 AT1G06920.1 ovate family protein 4 Encodes OFP4, a member of the plant specific ovate family proteins. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. OFP4 interacts with KNAT7 to regulate secondary cell wall formation. ovate family protein 4;(source:Araport11) Ipc02G0027430 AT1G75500.2 Walls Are Thin 1 An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3) and the nodulin MtN21-like transporter family. Walls Are Thin 1;(source:Araport11) Ipc02G0027420 AT4G10450.1 Ribosomal protein L6 family 0 Ribosomal protein L6 family;(source:Araport11) Ipc02G0027410 AT3G55550.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0027400 AT3G49540.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0027390 AT1G18010.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0027380 AT5G24600.1 Protein of unknown function, DUF599 0 TRP-like ion channel protein (Protein of unknown function, DUF599);(source:Araport11) Ipc02G0027370 AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes an essential protein of unknown function.OPNR is expressed in rapidly dividing cells and may function in cell cycle progression. It is expressed in mitochondria and the nuclear envelope. Loss of function results in embryo lethality and reduced transmission through the female. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0027360 AT4G25320.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc02G0027350 AT3G49590.2 Autophagy-related protein 13 0 Autophagy-related protein 13;(source:Araport11) Ipc02G0027340 AT1G50920.1 Nucleolar GTP-binding protein Putative GTPase involved in HA - and ABA-mediated signaling pathways, particularly during defense respnses to pathogens. Has paralog NOG1-2. Nucleolar GTP-binding protein;(source:Araport11) Ipc02G0027330 AT4G33270.1 Transducin family protein / WD-40 repeat family protein Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0027320 AT4G33270.1 Transducin family protein / WD-40 repeat family protein Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0027310 AT3G03140.1 Tudor/PWWP/MBT superfamily protein Encodes a chromatin-associated protein that interacts with plant nuclear lamin-like components to regulate nuclear size. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc02G0027300 AT1G50240.3 0 The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene that is involved in male meiosis cytokinesis. Cytokinesis-defective mutants, named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED. kinase family with ARM repeat domain-containing protein;(source:Araport11) Ipc02G0027290 #N/A #N/A #N/A #N/A Ipc02G0027280 AT1G54130.1 RELA/SPOT homolog 3 This gene appears to be at least partially redundant with RSH2 (At3g14050). Guanosine tetraphosphate synthesized by RSH2/RSH3 (and CRSH At3g17470) to an unknown extent can repress chloroplast gene expression, and also reduce chloroplast size. RELA/SPOT homolog 3;(source:Araport11) Ipc02G0027270 AT5G17060.2 0 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins. ADP-ribosylation factor B1B;(source:Araport11) Ipc02G0027260 AT5G17020.1 exportin 1A Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes. exportin 1A;(source:Araport11) Ipc02G0027250 AT3G25040.1 endoplasmic reticulum retention defective 2B Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling. The mRNA is cell-to-cell mobile. endoplasmic reticulum retention defective 2B;(source:Araport11) Ipc02G0027240 AT3G16090.1 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc02G0027230 AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit 0 NADH:ubiquinone oxidoreductase, 17.2kDa subunit;(source:Araport11) Ipc02G0027220 AT3G03050.1 cellulose synthase-like D3 encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. cellulose synthase-like D3;(source:Araport11) Ipc02G0027210 AT5G16890.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc02G0027200 AT5G16880.4 0 0 Target of Myb protein 1;(source:Araport11) Ipc02G0027190 AT3G03000.1 EF hand calcium-binding protein family Calmodulin like protein localized in the plant vacuolar compartment with a function of binding and modifying the activity of a tonoplast transporter (AtNHX1) from within the vacuole in a Ca+2- and pH-dependent manner EF hand calcium-binding protein family;(source:Araport11) Ipc02G0027180 AT5G16820.2 heat shock factor 3 Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. heat shock factor 3;(source:Araport11) Ipc02G0027170 AT5G16810.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0027160 AT1G65020.1 0 0 plasma protein;(source:Araport11) Ipc02G0027150 AT5G16730.1 Plant protein of unknown function (DUF827) Encodes a microtubule-associated protein. The mRNA is cell-to-cell mobile. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc02G0027140 AT1G65000.1 0 0 F-box only protein;(source:Araport11) Ipc02G0027130 AT1G32360.1 Zinc finger (CCCH-type) family protein 0 Zinc finger (CCCH-type) family protein;(source:Araport11) Ipc02G0027120 AT1G33140.1 Ribosomal protein L6 family Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2. The mRNA is cell-to-cell mobile. Ribosomal protein L6 family;(source:Araport11) Ipc02G0027110 AT5G16680.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc02G0027100 AT3G12490.2 cystatin B Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress). cystatin B;(source:Araport11) Ipc02G0027090 AT1G50200.1 Alanyl-tRNA synthetase 0 Alanyl-tRNA synthetase;(source:Araport11) Ipc02G0027080 AT5G17510.2 0 0 mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc02G0027070 AT1G64860.1 sigma factor A Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme sigma factor A;(source:Araport11) Ipc02G0027060 AT5G35980.1 yeast YAK1-related gene 1 Encodes a dual specificity protein kinase which phosphorylates substract proteins on Ser/Thr and Tyr residues. Some substrates include annexin family proteins. YAK1-like protein 1;(source:Araport11) Ipc02G0027050 AT5G23490.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0027040 AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0027030 AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0027020 AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0027010 AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0027000 AT1G28640.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0026990 AT5G03980.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc02G0026980 AT5G03980.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc02G0026970 AT1G18840.3 0 0 IQ-domain 30;(source:Araport11) Ipc02G0026960 AT2G19220.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc02G0026950 AT4G33420.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc02G0026940 AT5G23570.3 0 Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an Primeunknown Prime protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.The mRNA is cell-to-cell mobile. XS domain-containing protein / XS zinc finger domain-containing protein-like protein;(source:Araport11) Ipc02G0026930 AT1G04290.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc02G0026920 AT4G24960.1 HVA22 homologue D Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development. The mRNA is cell-to-cell mobile. HVA22 homologue D;(source:Araport11) Ipc02G0026900 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc02G0026910 AT3G05950.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc07G0019950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0019940 AT1G56720.4 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0019930 AT4G01850.2 S-adenosylmethionine synthetase 2 0 S-adenosylmethionine synthetase 2;(source:Araport11) Ipc07G0019920 AT4G10710.2 0 encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC. global transcription factor C;(source:Araport11) Ipc07G0019910 AT5G26751.1 shaggy-related kinase 11 Encodes a SHAGGY-related kinase involved in meristem organization. It regulates the redox stress response by phosphorylating glucose-6-phosphate dehydrogenase 6.Functions as a positive regulator of salt stress tolerance. Phosphorylates and enhances G6PD6 (At5g40760) activity shaggy-related kinase 11;(source:Araport11) Ipc07G0019900 AT1G02460.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc07G0019890 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0019880 AT1G56700.4 0 0 Peptidase C15, pyroglutamyl peptidase I-like protein;(source:Araport11) Ipc07G0019870 AT2G03800.2 0 encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. D-aminoacyl-tRNA deacylase;(source:Araport11) Ipc07G0019860 AT1G09420.1 glucose-6-phosphate dehydrogenase 4 Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally. glucose-6-phosphate dehydrogenase 4;(source:Araport11) Ipc07G0019850 AT1G02450.1 NIM1-interacting 1 NIMIN1 modulates PR gene expression according the following model: NPR1 forms a ternary complex with NIMIN1 and TGA factors upon SAR induction that binds to a positive regulatory cis-element of the PR-1 promoter, termed LS7. This leads to PR-1 gene induction. NIMIN1 decreases transcriptional activation, possibly through its EAR motif, which results in fine-tuning of PR-1 gene expression. NIM1-interacting 1;(source:Araport11) Ipc07G0019840 AT1G09390.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc07G0019830 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0019820 AT1G09380.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0019810 AT3G62290.3 ADP-ribosylation factor A1E A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. The mRNA is cell-to-cell mobile. ADP-ribosylation factor A1E;(source:Araport11) Ipc07G0019800 AT3G62290.3 ADP-ribosylation factor A1E A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. The mRNA is cell-to-cell mobile. ADP-ribosylation factor A1E;(source:Araport11) Ipc07G0019790 AT3G58110.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0019780 AT1G10630.2 0 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1F;(source:Araport11) Ipc07G0019770 AT2G47180.1 galactinol synthase 1 GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress. galactinol synthase 1;(source:Araport11) Ipc07G0019760 AT2G20250.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0019750 AT4G21960.1 Peroxidase superfamily protein Encodes AT4g21960 (AT4g21960/T8O5_170). The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc07G0019740 AT1G56560.1 Plant neutral invertase family protein A/N-InvA is a neutral invertase that breaks sucrose down into fructose and glucose. It is member of the larger family of alkaline/neutral invertases (GH100). GFP-tagged A/N-InvA localizes to the mitochondria. atinva mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of A/N-InvA transcripts rise in response to a hydrogen peroxide treatment. Plant neutral invertase family protein;(source:Araport11) Ipc07G0019730 AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0019720 AT1G56440.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0019710 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0019700 AT1G67090.1 ribulose bisphosphate carboxylase small chain 1A Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity. ribulose bisphosphate carboxylase small chain 1A;(source:Araport11) Ipc07G0019690 AT4G01990.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0019680 AT1G18610.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc07G0019670 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc07G0019660 AT5G26820.1 iron-regulated protein 3 Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis. The mRNA is cell-to-cell mobile. iron-regulated protein 3;(source:Araport11) Ipc07G0019650 AT1G56500.1 haloacid dehalogenase-like hydrolase family protein Encodes a thylakoid membrane protein with thioredoxin-like and beta-propeller domains located in the lumen and a haloacid-dehalogenase domain exposed to the chloroplast stroma. The protein's role may be to prevent formation of a slowly reversible form of antenna quenching, thereby maintaining the efficiency of light harvesting. The mRNA is cell-to-cell mobile. haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc07G0019640 AT1G09250.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0019630 AT5G27270.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0019620 AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc07G0019610 AT3G17120.5 0 0 transmembrane protein;(source:Araport11) Ipc07G0019600 AT5G26800.1 0 0 xaa-pro aminopeptidase P;(source:Araport11) Ipc07G0019590 AT5G49525.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0019580 AT1G09270.2 importin alpha isoform 4 Protein interacts with Agrobacterium proteins VirD2 and VirE2. importin alpha isoform 4;(source:Araport11) Ipc07G0019570 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0019560 AT1G78770.1 anaphase promoting complex 6 0 anaphase promoting complex 6;(source:Araport11) Ipc07G0019550 AT1G09280.1 0 0 rhodanese-like domain protein;(source:Araport11) Ipc07G0019540 AT1G09300.1 Metallopeptidase M24 family protein Encodes a mitochondrial protease ICP55. Alters the stability of proteins by removal of a single amino acid from their sequence. Metallopeptidase M24 family protein;(source:Araport11) Ipc07G0019530 AT1G09310.1 Protein of unknown function, DUF538 0 plant/protein (Protein of unknown function, DUF538);(source:Araport11) Ipc07G0019520 AT1G09320.1 agenet domain-containing protein Heterochromatin-binding protein which can bind to three H3K9me2 tails. Preferentially binds to long TEs. Required for transcriptional silencing, non-CG DNA methylation, and H3K9 dimethylation at some loci. agenet domain-containing protein;(source:Araport11) Ipc07G0019510 #N/A #N/A #N/A #N/A Ipc07G0019500 AT5G26850.4 Uncharacterized protein 0 Uncharacterized protein;(source:Araport11) Ipc07G0019490 AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1 Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. ADP glucose pyrophosphorylase large subunit 1;(source:Araport11) Ipc07G0019480 AT1G32310.1 0 Encodes a plant-specific negative regulator of the APC/C complex. It is expressed during embryogenesis and early plant development and plays a key role in organ size control. Mutants are defective in mitosis I of pollen development, resulting in pollen without sperm nuclei. valine-tRNA ligase;(source:Araport11) Ipc07G0019470 AT1G23380.1 KNOTTED1-like homeobox gene 6 homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. homeobox protein knotted-1-like 6;(source:Araport11) Ipc07G0019460 AT1G09240.1 nicotianamine synthase 3 Encodes a nicotianamine synthase. nicotianamine synthase 3;(source:Araport11) Ipc07G0019450 AT2G26310.5 0 Encodes a plastid stroma localized fatty acid binding protein. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc07G0019440 AT1G09240.1 nicotianamine synthase 3 Encodes a nicotianamine synthase. nicotianamine synthase 3;(source:Araport11) Ipc07G0019430 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0019420 AT1G56423.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0019410 AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc07G0019400 AT3G29765.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc07G0019390 AT5G03905.1 Iron-sulphur cluster biosynthesis family protein 0 Iron-sulfur cluster biosynthesis family protein;(source:Araport11) Ipc07G0019380 AT5G59800.1 methyl-CPG-binding domain 7 Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing. methyl-CPG-binding domain 7;(source:Araport11) Ipc07G0019370 AT1G56345.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc07G0019360 AT3G30820.1 Arabidopsis retrotransposon ORF-1 protein 0 retrotransposon ORF-1 protein;(source:Araport11) Ipc14G0001410 #N/A #N/A #N/A #N/A Ipc14G0001400 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc14G0001390 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc14G0001380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001360 AT2G38100.3 0 Encodes a nitrate transporter that is involved in nitrogen accumulation in embryos. proton-dependent oligopeptide transport (POT) family protein;(source:Araport11) Ipc14G0001350 AT1G62790.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc14G0001340 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc14G0001330 AT2G23420.2 0 0 nicotinate phosphoribosyltransferase 2;(source:Araport11) Ipc14G0001320 AT2G23420.1 nicotinate phosphoribosyltransferase 2 0 nicotinate phosphoribosyltransferase 2;(source:Araport11) Ipc14G0001310 AT5G62350.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0001300 AT3G51700.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc14G0001290 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0001280 AT1G62730.1 Terpenoid synthases superfamily protein 0 Terpenoid synthases superfamily protein;(source:Araport11) Ipc14G0001270 AT4G12410.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc14G0001260 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc14G0001250 AT1G12260.1 NAC 007 Encodes a NAC-domain transcription factor that is expressed in developing xylem. Over expression of this protein causes ectopic secondary cell wall growth. Complements some of the cell wall defects seen in SND1/NST1 double mutants. NAC 007;(source:Araport11) Ipc14G0001240 AT1G12250.1 Pentapeptide repeat-containing protein 0 Pentapeptide repeat-containing protein;(source:Araport11) Ipc14G0001230 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc14G0001220 AT2G34680.1 Outer arm dynein light chain 1 protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc14G0001210 AT1G62200.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0001200 ATCG01300.1 ribosomal protein L23 One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex ribosomal protein L23;(source:Araport11) Ipc14G0001190 AT2G45190.1 Plant-specific transcription factor YABBY family protein Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc14G0001180 AT1G07910.1 RNAligase Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains, an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo. RNAligase;(source:Araport11) Ipc14G0001170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001160 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001150 AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family Encodes a Golgi-localized UDP–glucose/UDP–galactose transporter that affects lateral root emergence. UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc14G0001140 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0001130 AT4G12420.2 Cupredoxin superfamily protein Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. Cupredoxin superfamily protein;(source:Araport11) Ipc14G0001120 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001110 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0001100 AT3G04920.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc14G0001090 AT1G12240.1 Glycosyl hydrolases family 32 protein Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole. The mRNA is cell-to-cell mobile. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc14G0001080 AT1G12230.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc14G0001070 AT5G04360.2 0 Encodes an enzyme thought to be involved in the hydrolysis of the α-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process. limit dextrinase;(source:Araport11) Ipc14G0001060 AT2G27800.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0001050 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc14G0001040 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc13G0016680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016690 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0016700 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016710 AT5G27380.1 glutathione synthetase 2 Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2;(source:Araport11) Ipc13G0016720 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0016730 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc13G0016740 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016750 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0016760 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0016770 AT5G03420.1 5'-AMP-activated protein kinase-related Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. Mutants lacking PTST3 have fewer starch granules in leaf chloroplasts than the wild type. PTST3 interacts with PTST2, which is also involved in granule initiation. 5-AMP-activated protein kinase-like protein;(source:Araport11) Ipc13G0016780 AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein 0 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein;(source:Araport11) Ipc13G0016790 AT2G44430.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc13G0016800 AT2G44420.3 0 0 protein N-terminal asparagine amidohydrolase family protein;(source:Araport11) Ipc13G0016810 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0016820 AT2G44410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0016830 AT2G35155.2 0 0 Trypsin family protein;(source:Araport11) Ipc13G0016840 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016850 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc13G0016860 AT4G21530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0016870 AT5G13230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0016880 AT1G28327.1 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc13G0016890 #N/A #N/A #N/A #N/A Ipc13G0016900 AT3G58000.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc13G0016910 AT2G44340.1 VQ motif-containing protein VQ18 is an ABA responsive gene and interacts with the ABI5 transcription factor. Along with its paralog VQ26, it is involved in negative regulation of ABA responses during early seedling development. VQ motif-containing protein;(source:Araport11) Ipc13G0016920 AT1G75400.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0016930 AT3G56710.2 0 Sig1 binding protein; interacts with Sig1R4. As well as Sig1, SibI is imported into chloroplasts and its expression is light-dependent in mature chloroplasts. sigma factor binding protein 1;(source:Araport11) Ipc13G0016940 AT2G32550.2 0 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc13G0016950 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc13G0016960 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016970 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc13G0016990 AT4G25835.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0017010 AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 0 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD);(source:Araport11) Ipc13G0017020 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0017030 AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0017050 AT2G44280.4 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0017060 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0016910 AT3G02170.3 0 Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function. longifolia2;(source:Araport11) Ipc06G0016930 AT5G13500.3 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc06G0016950 AT2G03120.1 signal peptide peptidase homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant. The mRNA is cell-to-cell mobile. signal peptide peptidase;(source:Araport11) Ipc06G0017740 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0017730 AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017720 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0017710 AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017700 AT4G03250.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0017030 AT3G21470.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc06G0017690 #N/A #N/A #N/A #N/A Ipc06G0017040 AT2G13770.1 0 0 nuclease;(source:Araport11) Ipc06G0017680 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc06G0017670 AT4G18380.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0017660 AT2G13370.3 0 0 chromatin remodeling 5;(source:Araport11) Ipc06G0017650 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0017110 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc06G0017640 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0017630 AT1G67370.1 DNA-binding HORMA family protein meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. DNA-binding HORMA family protein;(source:Araport11) Ipc06G0017620 AT1G50460.1 hexokinase-like 1 Involved in glucose-ethylene crosstalk. hexokinase-like 1;(source:Araport11) Ipc06G0017610 AT2G27950.3 0 0 Ring/U-Box superfamily protein;(source:Araport11) Ipc06G0017600 AT4G29050.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc06G0017590 #N/A #N/A #N/A #N/A Ipc12G0005880 AT3G07500.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc12G0005870 AT2G02390.2 glutathione S-transferase zeta 1 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism. glutathione S-transferase zeta 1;(source:Araport11) Ipc12G0005860 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0005850 AT1G79620.1 Leucine-rich repeat protein kinase family protein VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0005840 AT1G79620.3 0 VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0005830 AT1G79620.2 0 VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0005820 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0023800 AT1G69720.2 heme oxygenase 3 Encodes a member (HO3) of the heme oxygenase family. heme oxygenase 3;(source:Araport11) Ipc05G0023810 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0023820 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0023830 AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc05G0023840 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0023850 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc05G0023860 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0023870 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023880 #N/A #N/A #N/A #N/A Ipc05G0023890 AT3G09360.3 0 0 Cyclin/Brf1-like TBP-binding protein;(source:Araport11) Ipc05G0023900 AT2G39580.2 0 0 zinc finger C3H1 domain protein;(source:Araport11) Ipc05G0023910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023920 #N/A #N/A #N/A #N/A Ipc05G0023930 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0023940 AT2G41120.1 0 0 DUF309 domain protein;(source:Araport11) Ipc05G0023950 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0023960 AT2G45000.1 structural constituent of nuclear pore Encodes a nucleoporin, a component of the nuclear pore complex, that appears to be a major negative regulator of auxin signalling. Loss of function mutants are embryo lethal. structural constituent of nuclear pore;(source:Araport11) Ipc05G0023970 AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein Encodes a splicing factor PRP31. Involved in transcriptional gene silencing and stress responses. pre-mRNA processing ribonucleoprotein binding region-containing protein;(source:Araport11) Ipc05G0023980 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0023990 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0024000 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0024010 AT5G04200.1 metacaspase 9 Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a–f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. metacaspase 9;(source:Araport11) Ipc05G0024020 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc05G0024030 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc05G0024040 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc05G0024050 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007150 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0007160 AT3G01160.1 0 0 pre-rRNA-processing ESF1-like protein;(source:Araport11) Ipc08G0007170 AT4G20040.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0007180 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0007190 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc08G0007200 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0007210 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0007220 AT1G31040.1 PLATZ transcription factor family protein ORE15 is a nuclear localized member of the PLATZ family of transcription factors. Based on over expression and loss of function phenotypes, ORE15 functions in regulation of leaf cell proliferation and senescence. PLATZ transcription factor family protein;(source:Araport11) Ipc08G0007230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0007250 AT3G25690.6 0 actin binding protein required for normal chloroplast positioningThe mRNA is cell-to-cell mobile. Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0007260 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0007270 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0007280 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc08G0007290 AT5G14180.2 0 0 Myzus persicae-induced lipase 1;(source:Araport11) Ipc08G0007300 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0007310 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc08G0007320 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc08G0007330 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc08G0007340 AT3G55320.1 P-glycoprotein 20 0 P-glycoprotein 20;(source:Araport11) Ipc02G0000010 #N/A #N/A #N/A #N/A Ipc02G0000020 AT3G21160.2 0 Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation. alpha-mannosidase 2;(source:Araport11) Ipc02G0000030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000040 #N/A #N/A #N/A #N/A Ipc02G0000050 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000060 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0000070 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0000080 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000090 AT5G22410.1 root hair specific 18 0 root hair specific 18;(source:Araport11) Ipc02G0000100 AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0000110 AT3G20015.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0000120 AT1G52030.3 0 Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers. myrosinase-binding protein 2;(source:Araport11) Ipc02G0000130 AT4G12400.1 stress-inducible protein, putative Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. stress-inducible protein;(source:Araport11) Ipc02G0000140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000150 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0000160 AT3G51360.7 0 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0000180 AT5G53620.3 0 0 RNA polymerase II degradation factor;(source:Araport11) Ipc02G0000170 AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc02G0000190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000200 #N/A #N/A #N/A #N/A Ipc02G0000210 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000220 AT2G38730.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0000230 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc02G0000240 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028740 AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a pectin methyl esterase involved in embryo development. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0028750 AT1G70680.1 Caleosin-related family protein 0 Caleosin-related family protein;(source:Araport11) Ipc01G0028760 AT5G35525.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc01G0028770 AT5G35525.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc01G0028780 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0028790 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028800 AT1G14870.1 PLANT CADMIUM RESISTANCE 2 PCR2 encodes a membrane protein involved in zinc transport and detoxification. PLANT CADMIUM RESISTANCE 2;(source:Araport11) Ipc01G0028810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028820 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0028830 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc01G0028840 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc01G0028850 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028860 AT1G70710.1 glycosyl hydrolase 9B1 endo-1,4-beta-glucanase. Involved in cell elongation. glycosyl hydrolase 9B1;(source:Araport11) Ipc01G0028870 AT1G70650.1 Ran BP2/NZF zinc finger-like superfamily protein 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc01G0028880 AT1G48480.1 receptor-like kinase 1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene receptor-like kinase 1;(source:Araport11) Ipc01G0028890 AT1G68050.1 flavin-binding, kelch repeat, f box 1 Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression. flavin-binding, kelch repeat, f box 1;(source:Araport11) Ipc01G0028900 AT4G32510.1 HCO3- transporter family 0 HCO3- transporter family;(source:Araport11) Ipc01G0028910 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc01G0028920 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0024510 AT1G14810.1 semialdehyde dehydrogenase family protein encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis semialdehyde dehydrogenase family protein;(source:Araport11) Ipc05G0024500 AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0024490 AT3G08600.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc05G0024480 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0024470 AT3G08610.1 0 0 NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit;(source:Araport11) Ipc05G0024460 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0024450 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0024440 AT3G25560.3 NSP-interacting kinase 2 0 NSP-interacting kinase 2;(source:Araport11) Ipc05G0024430 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0024420 AT3G08640.1 Protein of unknown function (DUF3411) 0 alphavirus core family protein (DUF3411);(source:Araport11) Ipc05G0024410 AT5G01950.8 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0024400 AT3G24040.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc05G0024390 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc05G0024380 AT3G22180.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0024370 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc05G0024360 #N/A #N/A #N/A #N/A Ipc05G0024350 AT2G39630.3 0 Encodes a putative dolichyl-phosphate β-glucosyltransferase. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc05G0024340 AT5G45600.2 YEATS family protein The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. It negatively regulates flowering by controlling the H4 acetylation levels in the FLC and FT chromatin. YEATS family protein;(source:Araport11) Ipc05G0024330 AT4G00155.1 0 0 retrotransposon Gag;(source:Araport11) Ipc05G0024320 AT1G37113.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0024310 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0024300 AT2G37340.6 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc05G0024290 AT2G21270.5 0 0 ubiquitin fusion degradation 1;(source:Araport11) Ipc05G0024280 #N/A #N/A #N/A #N/A Ipc05G0024270 AT2G21290.1 0 0 30S ribosomal protein S31;(source:Araport11) Ipc05G0024260 AT4G38960.6 0 BBX19 is a B-box containing transcriptional regulator involved in photomporphogenesis and flowering. B-box type zinc finger family protein;(source:Araport11) Ipc05G0024250 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc05G0024240 AT4G38890.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc05G0024230 AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds The mRNA is cell-to-cell mobile. peptidylprolyl cis/trans isomerase, NIMA-interacting 1;(source:Araport11) Ipc05G0024220 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc05G0024210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0024200 AT5G04200.1 metacaspase 9 Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a–f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. metacaspase 9;(source:Araport11) Ipc05G0007470 AT2G23090.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc05G0007480 AT5G67380.1 casein kinase alpha 1 Casein kinase II (CK2) catalytic subunit (alpha 1). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis. casein kinase alpha 1;(source:Araport11) Ipc05G0007490 AT4G37510.1 Ribonuclease III family protein 0 Ribonuclease III family protein;(source:Araport11) Ipc05G0007500 AT4G37530.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0007510 AT2G14850.1 0 0 transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11) Ipc05G0007520 AT5G10360.1 Ribosomal protein S6e RPS6A and RPS6B are fully redundant and essential during gametogenesis. Ribosomal protein S6e;(source:Araport11) Ipc05G0007530 AT2G22900.1 Galactosyl transferase GMA12/MNN10 family protein Encodes MUCI10, a galactomannan-1,6-galactosyltransferase. MUCI10 likely decorates glucomannan, synthesized by CSLA2, with galactose residues in vivo. The degree of galactosylation is essential for the synthesis of the GGM backbone, the structure of cellulose, mucilage density, as well as the adherence of pectin. Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc05G0007540 AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0007550 AT5G67640.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0007560 AT4G37710.2 0 0 VQ motif-containing protein;(source:Araport11) Ipc05G0007570 AT1G10150.1 Carbohydrate-binding protein 0 Carbohydrate-binding protein;(source:Araport11) Ipc05G0007580 AT4G37740.1 growth-regulating factor 2 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 2;(source:Araport11) Ipc05G0007590 AT5G65840.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc05G0007600 AT5G55550.9 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0007610 AT5G10050.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0007620 AT4G37750.1 Integrase-type DNA-binding superfamily protein ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed in the chalaza, floral organ primordia, and lateral shoot organ primordia. Regulates growth and cell numbers during organogenesis. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0007630 AT2G30432.1 Homeodomain-like superfamily protein Encodes TRICHOMELESS1 (TCL1), a single-repeat MYB-type transcription factor that negatively regulates trichome formation by suppressing GL1 (GLABRA1). In a tandem repeat with AT2g30424 and AT2g30420. Homeodomain-like superfamily protein;(source:Araport11) Ipc05G0007640 AT3G49750.1 receptor like protein 44 0 receptor like protein 44;(source:Araport11) Ipc05G0007650 AT1G13220.2 nuclear matrix constituent protein-related Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. nuclear matrix constituent protein-like protein;(source:Araport11) Ipc05G0007660 AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0007670 AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc05G0007680 AT4G37770.1 1-amino-cyclopropane-1-carboxylate synthase 8 Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8;(source:Araport11) Ipc05G0007690 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc05G0007700 AT5G65780.1 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) Encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant. Note that the AT5G65780.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support. The mRNA is cell-to-cell mobile. branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);(source:Araport11) Ipc05G0007710 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0007720 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0007730 AT4G37790.1 Homeobox-leucine zipper protein family Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper protein family;(source:Araport11) Ipc05G0007740 AT4G37830.1 cytochrome c oxidase-related 0 cytochrome c oxidase-like protein;(source:Araport11) Ipc05G0007750 #N/A #N/A #N/A #N/A Ipc05G0007760 AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1 encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA. peroxisomal NAD-malate dehydrogenase 1;(source:Araport11) Ipc05G0007770 AT3G49660.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0007780 AT3G49650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0007790 AT4G37870.1 phosphoenolpyruvate carboxykinase 1 Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol. phosphoenolpyruvate carboxykinase 1;(source:Araport11) Ipc05G0007800 AT2G45680.1 TCP family transcription factor 0 TCP family transcription factor;(source:Araport11) Ipc05G0007810 AT3G49740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0007820 AT3G49640.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc05G0007830 AT2G27490.4 0 AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. dephospho-CoA kinase family;(source:Araport11) Ipc05G0007840 AT5G65660.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0007850 AT5G65640.1 beta HLH protein 93 bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages. beta HLH protein 93;(source:Araport11) Ipc05G0007860 AT2G32210.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc05G0007870 AT5G10550.1 global transcription factor group E2 This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation. global transcription factor group E2;(source:Araport11) Ipc05G0007880 AT2G22640.1 BRICK1, putative Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Required for accumulation of SCAR1 protein in vivo. Selectively stabilizes SCAR2. BRICK1;(source:Araport11) Ipc05G0007890 AT5G10540.1 Zincin-like metalloproteases family protein 0 Zincin-like metalloproteases family protein;(source:Araport11) Ipc05G0007900 AT5G39790.3 0 Encodes a chloroplast localized protein that is involved in protein translocation and starch metabolism. PTST helps localize GBSS to the starch granules where GBSS functions in amylose biosynthesis. PROTEIN TARGETING TO STARCH (PTST);(source:Araport11) Ipc05G0007910 AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc05G0007920 AT1G66370.1 myb domain protein 113 Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis. myb domain protein 113;(source:Araport11) Ipc05G0007930 AT1G66370.1 myb domain protein 113 Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis. myb domain protein 113;(source:Araport11) Ipc05G0007940 AT2G19170.2 0 Encodes a novel subtilisin-like serine protease. subtilisin-like serine protease 3;(source:Araport11) Ipc05G0007950 AT1G66370.1 myb domain protein 113 Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis. myb domain protein 113;(source:Araport11) Ipc05G0007960 AT5G23930.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc05G0007970 AT4G26850.1 mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light. GDP-L-galactose phosphorylase 1;(source:Araport11) Ipc05G0007980 AT5G17480.1 pollen calcium-binding protein 1 0 pollen calcium-binding protein 1;(source:Araport11) Ipc05G0007990 AT3G03380.1 DegP protease 7 Encodes a putative DegP protease. The mRNA is cell-to-cell mobile. DegP protease 7;(source:Araport11) Ipc05G0008000 AT1G23050.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0008010 #N/A #N/A #N/A #N/A Ipc05G0008020 AT1G49000.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0008030 AT2G01340.1 0 Encodes a protein whose expression is responsive to nematode infection. plastid movement impaired protein;(source:Araport11) Ipc05G0008040 AT5G17460.3 0 0 glutamyl-tRNA (Gln) amidotransferase subunit C;(source:Araport11) Ipc05G0008050 AT5G17450.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0008060 AT1G66520.1 formyltransferase, putative 0 formyltransferase;(source:Araport11) Ipc05G0008070 AT1G66620.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc05G0008080 AT5G37930.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc05G0008090 AT5G37930.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc05G0008100 AT1G71090.1 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc05G0008110 AT5G38070.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc05G0008120 AT1G36730.1 Translation initiation factor IF2/IF5 0 Translation initiation factor IF2/IF5;(source:Araport11) Ipc05G0008130 AT1G64920.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0008140 AT2G01300.1 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc05G0008150 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0008160 AT5G08680.1 ATP synthase alpha/beta family protein Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile. ATP synthase alpha/beta family protein;(source:Araport11) Ipc05G0008170 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc05G0008180 AT1G66810.3 0 Encodes a tandem CCCH zinc finger (TZF) protein that can bind DNA and RNA, function as a transcriptional activator, and is involved in secondary wall biosynthesis. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc05G0008190 AT3G02600.9 0 Encodes phosphatidic acid phosphatase. Expressed during germination. lipid phosphate phosphatase 3;(source:Araport11) Ipc05G0008200 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc05G0008210 AT5G38210.3 0 0 Protein kinase family protein;(source:Araport11) Ipc05G0008220 AT5G16200.2 0 0 50S ribosomal protein-like protein;(source:Araport11) Ipc05G0008230 AT5G16160.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0008240 AT1G67050.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc05G0008250 AT1G67070.2 0 Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene Primes expression pattern is responding to the level of sugar in the cell. Mannose-6-phosphate isomerase, type I;(source:Araport11) Ipc05G0008260 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0008270 AT5G16120.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0008280 AT5G38450.1 cytochrome P450, family 735, subfamily A, polypeptide 1 0 cytochrome P450, family 735, subfamily A, polypeptide 1;(source:Araport11) Ipc05G0008290 AT1G68530.1 3-ketoacyl-CoA synthase 6 Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 6;(source:Araport11) Ipc05G0008300 AT5G38460.2 ALG6, ALG8 glycosyltransferase family 0 ALG6, ALG8 glycosyltransferase family;(source:Araport11) Ipc05G0008310 AT1G68590.1 Ribosomal protein PSRP-3/Ycf65 0 Ribosomal protein PSRP-3/Ycf65;(source:Araport11) Ipc05G0008320 AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like 0 Cytochrome c oxidase biogenesis protein Cmc1-like protein;(source:Araport11) Ipc05G0008330 AT3G02520.2 0 Encodes GF14 ν, a 14-3-3 protein isoform (14-3-3ν). general regulatory factor 7;(source:Araport11) Ipc05G0008340 AT4G36800.2 RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1. RUB1 conjugating enzyme 1;(source:Araport11) Ipc05G0008350 AT1G75080.2 Brassinosteroid signalling positive regulator (BZR1) family protein Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities. Brassinosteroid signaling positive regulator (BZR1) family protein;(source:Araport11) Ipc05G0008360 AT2G18570.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0008370 AT2G18570.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0008380 AT4G36750.1 Quinone reductase family protein 0 Quinone reductase family protein;(source:Araport11) Ipc05G0008390 AT4G36740.2 0 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 40;(source:Araport11) Ipc05G0008400 AT5G66710.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0008410 AT5G66710.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0008420 AT4G36730.2 G-box binding factor 1 member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box G-box binding factor 1;(source:Araport11) Ipc05G0008430 AT4G36710.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc05G0008440 AT2G18540.2 0 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc05G0008450 AT5G66720.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc05G0008460 AT5G66730.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc05G0008470 AT3G42570.1 peroxidase family protein 0 peroxidase family protein;(source:Araport11) Ipc05G0008480 AT5G66740.1 Protein of unknown function (DUF620) 0 spindle assembly abnormal protein (DUF620);(source:Araport11) Ipc05G0008490 AT4G36660.1 Protein of unknown function (DUF1195) 0 polyol transporter, putative (DUF1195);(source:Araport11) Ipc05G0008500 AT4G36650.1 plant-specific TFIIB-related protein Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus. plant-specific TFIIB-related protein;(source:Araport11) Ipc05G0008510 AT2G18470.3 0 Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4;(source:Araport11) Ipc05G0008520 AT3G50670.1 U1 small nuclear ribonucleoprotein-70K Encodes U1 snRNP 70K U1 small nuclear ribonucleoprotein-70K;(source:Araport11) Ipc05G0008530 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc05G0008540 AT5G66750.1 chromatin remodeling 1 Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation. chromatin remodeling 1;(source:Araport11) Ipc05G0008550 AT5G66770.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc05G0008560 AT5G66780.2 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc05G0008570 AT4G14305.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc05G0008580 AT1G75170.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc05G0008590 AT3G50845.1 Protein of unknown function (DUF59) 0 MIP18 family protein (DUF59);(source:Araport11) Ipc05G0008600 AT5G49560.1 Putative methyltransferase family protein 0 Putative methyltransferase family protein;(source:Araport11) Ipc05G0008610 AT1G63810.2 0 0 nucleolar protein;(source:Araport11) Ipc05G0008620 AT3G50870.1 GATA type zinc finger transcription factor family protein Encodes a GATA transcriptional regulator required to position the proembryo boundary in the early embryo. Regulates shoot apical meristem and flower development. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc05G0008630 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc05G0008640 AT2G18360.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0008650 AT1G75220.1 Major facilitator superfamily protein Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply. Major facilitator superfamily protein;(source:Araport11) Ipc05G0008660 AT2G18350.1 homeobox protein 24 0 homeobox protein 24;(source:Araport11) Ipc05G0008670 AT4G36600.1 Late embryogenesis abundant (LEA) protein 0 Late embryogenesis abundant (LEA) protein;(source:Araport11) Ipc05G0008680 AT2G18330.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc05G0008700 AT4G36550.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0008690 #N/A #N/A #N/A #N/A Ipc05G0008710 AT2G18280.2 tubby like protein 2 Member of TLP family The mRNA is cell-to-cell mobile. tubby like protein 2;(source:Araport11) Ipc05G0008720 AT5G03260.1 laccase 11 LAC11 is a putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 11;(source:Araport11) Ipc05G0008730 AT2G18250.1 4-phosphopantetheine adenylyltransferase At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis. 4-phosphopantetheine adenylyltransferase;(source:Araport11) Ipc05G0008740 AT5G27740.1 ATPase family associated with various cellular activities (AAA) A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. ATPase family associated with various cellular activities (AAA);(source:Araport11) Ipc05G0008750 AT2G18230.1 pyrophosphorylase 2 Encodes a protein that might have inorganic pyrophosphatase activity. pyrophosphorylase 2;(source:Araport11) Ipc05G0008760 AT1G19580.1 gamma carbonic anhydrase 1 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase 1;(source:Araport11) Ipc05G0008770 AT1G75310.2 0 0 auxin-like 1 protein;(source:Araport11) Ipc05G0008780 AT5G42800.1 dihydroflavonol 4-reductase dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR). The mRNA is cell-to-cell mobile. dihydroflavonol 4-reductase;(source:Araport11) Ipc05G0008790 AT5G42800.1 dihydroflavonol 4-reductase dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR). The mRNA is cell-to-cell mobile. dihydroflavonol 4-reductase;(source:Araport11) Ipc05G0008800 AT5G42800.1 dihydroflavonol 4-reductase dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR). The mRNA is cell-to-cell mobile. dihydroflavonol 4-reductase;(source:Araport11) Ipc05G0008810 AT5G42800.1 dihydroflavonol 4-reductase dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR). The mRNA is cell-to-cell mobile. dihydroflavonol 4-reductase;(source:Araport11) Ipc05G0008820 AT3G50900.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0008830 AT3G50910.1 0 0 netrin receptor DCC;(source:Araport11) Ipc05G0008840 AT5G66460.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc05G0008850 AT5G66390.1 Peroxidase superfamily protein Encodes a peroxidase that is involved in lignin biosynthesis. Peroxidase superfamily protein;(source:Araport11) Ipc05G0008860 AT1G60430.3 0 0 actin-related protein C3;(source:Araport11) Ipc05G0008870 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0008880 AT2G47180.1 galactinol synthase 1 GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress. galactinol synthase 1;(source:Araport11) Ipc05G0008890 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc05G0008900 AT3G06130.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0008910 AT3G60820.3 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes 20S proteasome beta subunit PBF1 (PBF1). N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc05G0008920 AT5G66420.2 0 0 TIM-barrel signal transduction protein;(source:Araport11) Ipc05G0008930 AT5G66410.1 phosducin-like protein 3 homolog Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy. thioredoxin domain PLP3B-like protein;(source:Araport11) Ipc05G0008940 AT5G66390.1 Peroxidase superfamily protein Encodes a peroxidase that is involved in lignin biosynthesis. Peroxidase superfamily protein;(source:Araport11) Ipc05G0008950 AT4G36380.1 Cytochrome P450 superfamily protein Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Cytochrome P450 superfamily protein;(source:Araport11) Ipc05G0008960 AT3G51010.1 0 0 protein translocase subunit;(source:Araport11) Ipc05G0008970 AT4G36360.1 beta-galactosidase 3 putative beta-galactosidase (BGAL3 gene) beta-galactosidase 3;(source:Araport11) Ipc05G0008980 AT3G51030.1 thioredoxin H-type 1 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin H-type 1;(source:Araport11) Ipc05G0008990 AT1G77370.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc05G0009000 AT4G36250.1 aldehyde dehydrogenase 3F1 Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. aldehyde dehydrogenase 3F1;(source:Araport11) Ipc05G0009010 AT5G66330.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0009020 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc05G0009030 AT5G66320.2 GATA transcription factor 5 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5;(source:Araport11) Ipc05G0009040 AT3G51100.1 0 0 altered inheritance of mitochondria protein;(source:Araport11) Ipc05G0009060 AT4G36210.2 Protein of unknown function (DUF726) 0 transmembrane/coiled-coil protein (DUF726);(source:Araport11) Ipc05G0009050 AT4G36210.1 Protein of unknown function (DUF726) 0 transmembrane/coiled-coil protein (DUF726);(source:Araport11) Ipc05G0009070 AT2G18090.2 0 0 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein;(source:Araport11) Ipc05G0009080 AT4G36180.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc05G0009090 AT2G18060.3 0 Encodes a NAC-domain transcription factor that is expressed in developing vessels and protoxylem. Along with other members of this family, VND1 appears to regulate the development of genes required for secondary cell wall biosynthesis. vascular related NAC-domain protein 1;(source:Araport11) Ipc05G0009100 AT5G42520.1 basic pentacysteine 6 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 6;(source:Araport11) Ipc05G0009110 AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds The mRNA is cell-to-cell mobile. peptidylprolyl cis/trans isomerase, NIMA-interacting 1;(source:Araport11) Ipc05G0009120 AT1G20580.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc05G0009130 AT4G34760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc05G0009140 AT2G17990.3 0 Calcium-dependent protein kinase 1 adaptor protein involved in vacuolar transport and lytic vacuole biogenesis. polyamine-modulated factor 1-binding protein;(source:Araport11) Ipc05G0009150 AT2G17970.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0009160 AT2G21470.2 SUMO-activating enzyme 2 Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 2;(source:Araport11) Ipc05G0009170 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc05G0009180 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc05G0009190 AT2G17975.1 zinc finger (Ran-binding) family protein SRP1 is a C2C2 type zinc finger protein that binds RNA. It has a role in response to ABA.. It can bind the 3'UTR of ABI2 and appears to be involved in RNA turnover. zinc finger (Ran-binding) family protein;(source:Araport11) Ipc05G0009200 AT4G16220.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0009210 AT1G69220.1 Protein kinase superfamily protein Encodes serine/threonine kinase 1 (SIK1), a Hippo homolog. Regulates cell proliferation and cell expansion. Protein kinase superfamily protein;(source:Araport11) Ipc05G0009220 AT5G53620.3 0 0 RNA polymerase II degradation factor;(source:Araport11) Ipc05G0009230 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0009240 AT5G66240.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD40-repeat protein that interacts with the E3 Cullin Ring Ligase subunit DDB1a and is involved in secondary wall modification and thickening by regulating the degradation of specific proteins. RNAi-mediated silencing results in anther indehiscence and infertility. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0009250 AT3G09032.1 0 0 josephin-like protein;(source:Araport11) Ipc05G0009260 AT5G66230.1 Chalcone-flavanone isomerase family protein 0 Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc05G0009270 AT3G51240.1 flavanone 3-hydroxylase Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR). flavanone 3-hydroxylase;(source:Araport11) Ipc05G0009280 AT2G17890.1 calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated. calcium-dependent protein kinase 16;(source:Araport11) Ipc05G0009290 AT5G44030.3 0 Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.The mRNA is cell-to-cell mobile. cellulose synthase A4;(source:Araport11) Ipc05G0009300 AT5G15843.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0009310 AT2G17880.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc05G0009320 AT5G66200.1 armadillo repeat only 2 Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. armadillo repeat only 2;(source:Araport11) Ipc05G0009330 AT4G38660.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc05G0009340 AT4G10770.1 oligopeptide transporter 7 oligopeptide transporter oligopeptide transporter 7;(source:Araport11) Ipc05G0009350 AT1G11000.3 0 A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc05G0009360 AT4G38630.1 regulatory particle non-ATPase 10 Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities regulatory particle non-ATPase 10;(source:Araport11) Ipc05G0009370 AT5G66150.2 0 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc05G0009380 AT5G66150.2 0 0 Glycosyl hydrolase family 38 protein;(source:Araport11) Ipc05G0009390 AT3G51280.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0009400 AT4G35000.1 ascorbate peroxidase 3 Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein. ascorbate peroxidase 3;(source:Araport11) Ipc05G0009410 AT5G37500.4 0 Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold. gated outwardly-rectifying K+ channel;(source:Araport11) Ipc05G0009420 AT2G17800.2 Arabidopsis RAC-like 1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. RAC-like 1;(source:Araport11) Ipc05G0009430 AT2G17770.2 basic region/leucine zipper motif 27 Encodes a paralog of bZIP transcription factor FD. This protein interacts with FD and FT. basic region/leucine zipper motif 27;(source:Araport11) Ipc05G0009440 AT4G35100.2 plasma membrane intrinsic protein 3 a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP plasma membrane intrinsic protein 3;(source:Araport11) Ipc05G0009450 AT5G42180.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0009460 AT3G01160.1 0 0 pre-rRNA-processing ESF1-like protein;(source:Araport11) Ipc05G0009470 AT2G17760.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0009480 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc05G0009490 AT3G56890.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc05G0009500 AT5G62510.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0009510 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0009520 AT3G51390.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0009530 AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0009540 AT5G66055.1 ankyrin repeat protein A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. ankyrin repeat protein;(source:Araport11) Ipc05G0009550 AT4G35780.1 ACT-like protein tyrosine kinase family protein 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc05G0009560 AT2G17695.3 0 0 outer envelope protein;(source:Araport11) Ipc05G0009570 AT3G51390.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0009580 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc05G0009590 AT5G40400.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0009600 AT3G12500.1 basic chitinase encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase;(source:Araport11) Ipc05G0009610 AT3G12500.1 basic chitinase encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase;(source:Araport11) Ipc05G0009620 AT2G17650.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0009630 AT4G35640.1 serine acetyltransferase 3;2 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions. serine acetyltransferase 3;(source:Araport11) Ipc05G0009640 AT4G35630.1 phosphoserine aminotransferase Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. The mRNA is cell-to-cell mobile. phosphoserine aminotransferase;(source:Araport11) Ipc05G0009650 AT1G20610.1 Cyclin B2;3 0 Cyclin B2;(source:Araport11) Ipc05G0009660 AT2G17580.1 Polynucleotide adenylyltransferase family protein Encodes a bacterial-type poly(A) polymerase, AGS1. Polynucleotide adenylyltransferase family protein;(source:Araport11) Ipc05G0009670 AT2G17200.1 ubiquitin family protein Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12. ubiquitin family protein;(source:Araport11) Ipc05G0009680 AT4G35700.1 zinc finger (C2H2 type) family protein Target promoter of the male germline-specific transcription factor DUO1. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc05G0009690 AT4G35090.1 catalase 2 Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2). catalase 2;(source:Araport11) Ipc05G0009700 AT5G66020.1 Phosphoinositide phosphatase family protein Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. non-consensus AT donor splice site at exon 7, TA donor splice site at exon 10, AT acceptor splice at exon 13. Phosphoinositide phosphatase family protein;(source:Araport11) Ipc05G0009710 AT2G17220.2 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc05G0009720 AT4G35590.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc05G0009730 AT2G39910.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0009740 AT4G39530.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0009750 AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0009760 AT1G20693.2 high mobility group B2 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B2;(source:Araport11) Ipc05G0009770 AT4G39955.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0009780 AT4G39970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0009790 AT4G08980.5 F-BOX WITH WD-40 2 Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response. It is a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins. F-BOX WITH WD-40 2;(source:Araport11) Ipc05G0009800 AT5G10320.2 0 0 ATP synthase subunit B;(source:Araport11) Ipc05G0009810 AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0009820 AT5G10360.1 Ribosomal protein S6e RPS6A and RPS6B are fully redundant and essential during gametogenesis. Ribosomal protein S6e;(source:Araport11) Ipc05G0009830 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc05G0009840 AT2G22420.1 Peroxidase superfamily protein Encodes a cell wall-localized class III peroxidase that is directly regulated by the MADS-box transcription factor AGL15 and is involved in lignified tissue formation. Peroxidase superfamily protein;(source:Araport11) Ipc05G0009850 AT1G06143.1 0 0 basic helix loop helix DNA-binding superfamily protein;(source:Araport11) Ipc05G0009860 AT5G10360.1 Ribosomal protein S6e RPS6A and RPS6B are fully redundant and essential during gametogenesis. Ribosomal protein S6e;(source:Araport11) Ipc05G0009870 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc05G0009880 AT4G40020.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc05G0009890 AT5G05670.2 signal recognition particle binding 0 signal recognition particle binding protein;(source:Araport11) Ipc05G0009900 AT1G20823.1 RING/U-box superfamily protein Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc05G0009910 AT1G20823.1 RING/U-box superfamily protein Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc05G0009920 AT5G65960.1 GTP binding 0 GTP binding protein;(source:Araport11) Ipc05G0009930 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc05G0009940 AT2G17420.1 NADPH-dependent thioredoxin reductase A NADPH-dependent thioredoxin reductase, major cytosolic isoform The mRNA is cell-to-cell mobile. NADPH-dependent thioredoxin reductase A;(source:Araport11) Ipc05G0009950 AT1G55530.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0009960 AT5G27200.1 acyl carrier protein 5 Encodes an acyl carrier protein family member. Expression is induced by salt stress and overexpression leads to increased salt tolerance. acyl carrier protein 5;(source:Araport11) Ipc05G0009970 AT4G10520.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc05G0009980 AT3G51500.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0009990 AT1G14130.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein DAO1 is an IAA oxidase expressed in many different plant parts. it is a member of a family of dioxygenase and 2OG Fe(II) oxygenase domain and DAO domain containing proteins. It appears to be the major IAA oxidase in planta and major contributor to IAA degradation. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0010000 AT5G65930.2 kinesin-like calmodulin-binding protein (ZWICHEL) encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. kinesin-like calmodulin-binding protein (ZWICHEL);(source:Araport11) Ipc05G0010010 AT3G02700.1 NC domain-containing protein-related 0 NC domain-containing protein-like protein;(source:Araport11) Ipc05G0010020 AT5G16370.1 acyl activating enzyme 5 0 acyl activating enzyme 5;(source:Araport11) Ipc05G0010030 AT1G65730.1 YELLOW STRIPE like 7 Arabidopsis thaliana metal-nicotianamine transporter YSL4 YELLOW STRIPE like 7;(source:Araport11) Ipc05G0010040 AT5G10695.1 0 0 methionyl-tRNA synthetase;(source:Araport11) Ipc05G0010050 AT5G15250.1 FTSH protease 6 Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. FTSH protease 6;(source:Araport11) Ipc05G0010060 AT1G06440.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc05G0010070 AT1G65700.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc05G0010080 AT2G04270.7 0 Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose. RNAse E/G-like protein;(source:Araport11) Ipc05G0010090 AT3G02690.1 nodulin MtN21 /EamA-like transporter family protein Nucleotide/sugar transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc05G0010100 AT1G65820.1 microsomal glutathione s-transferase, putative 0 microsomal glutathione s-transferase;(source:Araport11) Ipc05G0010110 AT3G02710.1 ARM repeat superfamily protein Encodes a protein with a putative role in mRNA splicing. ARM repeat superfamily protein;(source:Araport11) Ipc05G0010120 AT5G56550.1 oxidative stress 3 Encodes OXIDATIVE STRESS 3 (OXS3), involved in tolerance to heavy metals and oxidative stress. oxidative stress 3;(source:Araport11) Ipc05G0010130 AT5G17230.4 0 Encodes phytoene synthase that is the rate-limiting enzyme in the carotenoid biosynthetic pathway and that interacts with the ORANGE (OR) protein. PSY Primes expression is posttransciptionally regulated by OR. PHYTOENE SYNTHASE;(source:Araport11) Ipc05G0010140 AT5G17240.1 SET domain group 40 0 SET domain group 40;(source:Araport11) Ipc05G0010150 AT5G45510.2 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0010160 AT1G79450.1 ALA-interacting subunit 5 0 ALA-interacting subunit 5;(source:Araport11) Ipc05G0010170 AT1G65920.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc05G0010180 AT1G73150.2 0 Bromodomain and extra terminal domain family protein. Binds to acetyl-histone H3. Binding is reduced when GTE3 is SUMOylated by SIZ1. global transcription factor group E3;(source:Araport11) Ipc05G0010190 AT1G78360.1 glutathione S-transferase TAU 21 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 21;(source:Araport11) Ipc05G0010200 AT3G03220.1 expansin A13 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin A13;(source:Araport11) Ipc05G0010210 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc05G0010220 AT5G17300.1 Homeodomain-like superfamily protein Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner. Homeodomain-like superfamily protein;(source:Araport11) Ipc05G0010230 AT5G17310.2 UDP-glucose pyrophosphorylase 2 0 UDP-glucose pyrophosphorylase 2;(source:Araport11) Ipc05G0010240 AT5G37290.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0010250 AT1G65930.1 cytosolic NADP+-dependent isocitrate dehydrogenase Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses. The mRNA is cell-to-cell mobile. cytosolic NADP+-dependent isocitrate dehydrogenase;(source:Araport11) Ipc05G0010260 AT5G17330.1 glutamate decarboxylase Encodes one of two isoforms of glutamate decarboxylase. The mRNA is cell-to-cell mobile. glutamate decarboxylase;(source:Araport11) Ipc05G0010270 AT3G03270.2 Adenine nucleotide alpha hydrolases-like superfamily protein HRU1 is a hypoxia induced universal stress protein. It exists as two splice variants with AT3G03270.2 , which contains a putative dimerization domain, the predominant transcript found under anoxia. It is induced by RAP2.12. Subcellular localization is dynamic; under anoxia the localization of HRU1 shifts from cytoplasm to the plasma membrane. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc05G0010280 AT2G01970.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc05G0010290 AT2G01970.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc05G0010300 AT4G05230.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc05G0010310 AT2G01940.1 C2H2-like zinc finger protein Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. C2H2-like zinc finger protein;(source:Araport11) Ipc05G0010320 AT1G02410.3 0 Encodes a member of the cytochrome c oxidase 11 protein family. It is an integral mitochondrial protein and likely plays an important role as a mitochondrial chaperone in COX complex assembly, affecting plant growth and pollen germination. cytochrome c oxidase assembly protein CtaG / Cox11 family;(source:Araport11) Ipc05G0010330 AT5G16560.1 Homeodomain-like superfamily protein Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis. Homeodomain-like superfamily protein;(source:Araport11) Ipc05G0010340 AT1G66140.1 zinc finger protein 4 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 4;(source:Araport11) Ipc05G0010350 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc05G0010360 AT5G37530.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0010370 AT5G37510.1 NADH-ubiquinone dehydrogenase, mitochondrial, putative Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. The mRNA is cell-to-cell mobile. NADH-ubiquinone dehydrogenase;(source:Araport11) Ipc05G0010380 AT5G39840.1 ATP-dependent RNA helicase, mitochondrial, putative 0 ATP-dependent RNA helicase;(source:Araport11) Ipc05G0010390 AT5G37540.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0010400 AT5G37600.1 glutamine synthase clone R1 encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium hypothetical protein;(source:Araport11) Ipc05G0010410 AT1G18300.1 nudix hydrolase homolog 4 0 nudix hydrolase homolog 4;(source:Araport11) Ipc05G0010420 AT5G37670.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc05G0010430 AT5G17190.1 0 0 B-cell receptor-associated-like protein;(source:Araport11) Ipc05G0010440 AT1G48480.1 receptor-like kinase 1 Arabidopsis thaliana receptor-like protein kinase (RKL1) gene receptor-like kinase 1;(source:Araport11) Ipc05G0010450 AT5G37680.1 ADP-ribosylation factor-like A1A A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. ADP-ribosylation factor-like A1A;(source:Araport11) Ipc05G0010460 AT1G66230.1 myb domain protein 20 Encodes a putative transcription factor (MYB20). myb domain protein 20;(source:Araport11) Ipc05G0010470 AT1G66250.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc05G0010480 AT5G37710.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0010490 AT5G37720.2 0 Encodes a member of a family of proteins involved in export of RNAs from the nucleus and transcriptional coactivation. ALWAYS EARLY 4;(source:Araport11) Ipc05G0010500 AT5G16630.2 DNA repair protein Rad4 family 0 DNA repair protein Rad4 family;(source:Araport11) Ipc05G0010510 AT1G14900.1 high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A;(source:Araport11) Ipc05G0010520 AT2G04660.1 anaphase-promoting complex/cyclosome 2 a highly conserved ubiquitin-protein ligase involved in cell cycle regulation anaphase-promoting complex/cyclosome 2;(source:Araport11) Ipc05G0010530 AT2G04660.1 anaphase-promoting complex/cyclosome 2 a highly conserved ubiquitin-protein ligase involved in cell cycle regulation anaphase-promoting complex/cyclosome 2;(source:Araport11) Ipc05G0010540 AT2G04660.1 anaphase-promoting complex/cyclosome 2 a highly conserved ubiquitin-protein ligase involved in cell cycle regulation anaphase-promoting complex/cyclosome 2;(source:Araport11) Ipc05G0010550 AT1G26760.1 SET domain protein 35 0 SET domain protein 35;(source:Araport11) Ipc05G0010560 AT5G16720.1 Protein of unknown function, DUF593 0 caldesmon-like protein (Protein of unknown function, DUF593);(source:Araport11) Ipc05G0010570 AT1G66330.2 senescence-associated family protein 0 senescence-associated family protein;(source:Araport11) Ipc05G0010580 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc05G0010590 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc05G0010600 AT2G31980.1 PHYTOCYSTATIN 2 0 PHYTOCYSTATIN 2;(source:Araport11) Ipc05G0010610 AT1G66345.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein involved in splicing of nad4 intron which affects biogenesis of the respiratory complex I. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0010620 AT5G16710.1 dehydroascorbate reductase 1 DHAR3 protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.Encodes 30-40% of extractable leaf GSH-dependent DHAR activity. Single knockout mutants show unaltered ascorbate and glutathione status in optimal and oxidative stress conditions.Makes a minor contribution to glutathione oxidation in response to increased intracellular hydrogen peroxide (catalase deficiency) (PMID:28381499). dehydroascorbate reductase 1;(source:Araport11) Ipc05G0010630 AT2G22620.3 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc05G0010640 AT4G15560.1 Deoxyxylulose-5-phosphate synthase Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis Deoxyxylulose-5-phosphate synthase;(source:Araport11) Ipc05G0010650 AT2G22600.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc05G0010660 AT2G22590.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0010670 AT5G65530.1 Protein kinase superfamily protein Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_ Protein kinase superfamily protein;(source:Araport11) Ipc05G0010680 AT5G10510.7 0 Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Intronic sequences are required for its expression in flowers.Acts redundantly with PLT5 and 7 in lateral root pattern formation. AINTEGUMENTA-like 6;(source:Araport11) Ipc05G0010690 AT5G10510.2 AINTEGUMENTA-like 6 Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Intronic sequences are required for its expression in flowers.Acts redundantly with PLT5 and 7 in lateral root pattern formation. AINTEGUMENTA-like 6;(source:Araport11) Ipc05G0010700 AT2G22560.1 Kinase interacting (KIP1-like) family protein 0 Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc05G0010710 AT4G38062.1 0 0 basic helix loop helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0010720 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc05G0010730 AT2G01710.2 0 SDJ2 functions partially redundantly with SDJ1 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc05G0010740 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0010750 AT4G38100.1 0 0 CURVATURE THYLAKOID 1D-like protein;(source:Araport11) Ipc05G0010760 AT5G65430.1 general regulatory factor 8 member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 general regulatory factor 8;(source:Araport11) Ipc05G0010770 AT5G65420.1 CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. CYCLIN D4;(source:Araport11) Ipc05G0010780 AT2G22480.1 phosphofructokinase 5 0 phosphofructokinase 5;(source:Araport11) Ipc05G0010790 AT4G24660.1 homeobox protein 22 0 homeobox protein 22;(source:Araport11) Ipc05G0010800 AT2G22475.1 GRAM domain family protein Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters. GRAM domain family protein;(source:Araport11) Ipc05G0010810 AT4G40060.1 homeobox protein 16 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 16;(source:Araport11) Ipc05G0010820 AT1G28690.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0010840 AT5G65290.1 LMBR1-like membrane protein 0 LMBR1-like membrane protein;(source:Araport11) Ipc05G0010830 AT5G65300.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0010850 AT5G24360.1 inositol requiring 1-1 IRE1A and IRE1B catalyze bZIP60 mRNA splicing, producing the active bZIP60 transcription factor. inositol requiring 1-1;(source:Araport11) Ipc05G0010860 AT3G51480.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.6;(source:Araport11) Ipc05G0010870 AT2G17525.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0010880 AT2G17525.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0010890 AT2G17525.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0010900 AT2G17525.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0010910 AT4G38250.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc05G0010920 AT4G35520.3 0 DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers MUTL protein homolog 3;(source:Araport11) Ipc05G0010930 AT4G35530.1 phosphatidylinositolglycan-related 0 phosphatidylinositolglycan-like protein;(source:Araport11) Ipc05G0010940 AT1G34370.2 C2H2 and C2HC zinc fingers superfamily protein Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction. In vitro binding and mutated-promoter-GUS assays identified that STOP1 directly activates AtALMT1 expression through the binding to the promoter by four zinc finger domains. Binding of STOP1 to promoter is an essential step of Al-inducible AtALMT1 expression. The mRNA is cell-to-cell mobile. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc05G0010950 AT4G39910.1 ubiquitin-specific protease 3 Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3;(source:Araport11) Ipc05G0010960 AT2G22300.2 signal responsive 1 Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes. signal responsive 1;(source:Araport11) Ipc05G0010970 AT5G10270.1 cyclin-dependent kinase C;1 Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. cyclin-dependent kinase C;(source:Araport11) Ipc05G0010980 AT5G65000.1 Nucleotide-sugar transporter family protein Encodes an ER-localized facilitator of UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-N-acetylgalactosamine (UDP-GalNAc) transport. It also regulates the cytokinin signal in meristematic cells through modulating activity of cytokinin oxidases/dehydrogenases. Finally, it is an important part of the ER quality control system, which determines the fate of aberrant proteins in the secretory pathway. Nucleotide-sugar transporter family protein;(source:Araport11) Ipc05G0010990 AT5G10240.1 asparagine synthetase 3 Encodes asparagine synthetase (ASN3). asparagine synthetase 3;(source:Araport11) Ipc05G0011000 AT4G39870.2 TLD-domain containing nucleolar protein 0 TLD-domain containing nucleolar protein;(source:Araport11) Ipc05G0011010 AT5G65030.1 0 0 nitric oxide synthase-interacting protein;(source:Araport11) Ipc05G0011020 AT5G10200.3 0 0 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein;(source:Araport11) Ipc05G0011030 AT4G39720.4 0 0 VQ motif-containing protein;(source:Araport11) Ipc05G0011040 AT4G39740.1 Thioredoxin superfamily protein Encodes HCC2, one of the two Arabidopsis genes (HCC1 and HCC2) resulting from a duplication with homology to the SCO proteins involved in copper insertion during cytochrome c oxidase (COX) assembly in other organisms. HCC2, which lacks the cysteines and histidine putatively involved in copper binding, functions in copper sensing and redox homeostasis. Thioredoxin superfamily protein;(source:Araport11) Ipc05G0011050 AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc05G0011060 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc05G0011070 AT3G07470.3 0 0 transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc05G0011090 AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein PLAT1 domain stress protein family member. Involved in mediating response to stresses such as pathogen infection. It is found in endoplasmic reticulum bodies. PLAT1 is induced by pathogenic fungi and induces the production of scopolin. Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11) Ipc05G0011080 AT1G69990.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0011100 AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein PLAT1 domain stress protein family member. Involved in mediating response to stresses such as pathogen infection. It is found in endoplasmic reticulum bodies. PLAT1 is induced by pathogenic fungi and induces the production of scopolin. Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11) Ipc05G0011110 AT5G65140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0011120 AT4G39780.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0011130 AT5G65110.1 acyl-CoA oxidase 2 Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis. acyl-CoA oxidase 2;(source:Araport11) Ipc05G0011140 AT4G39790.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP transcription factor, putative (DUF630 and DUF632);(source:Araport11) Ipc05G0011150 AT5G10120.1 Ethylene insensitive 3 family protein 0 Ethylene insensitive 3 family protein;(source:Araport11) Ipc05G0011160 AT5G65090.3 0 Encodes a protein involved in root hair morphogenesis and tip growth. Required for restricting both the size of the root-hair initiation site and the width of the root hairs during the transition to tip growth, but, apparently, is not required for normal subsequent tip growth. DNAse I-like superfamily protein;(source:Araport11) Ipc05G0011170 AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein Encodes a protein, expressed in leaves, with similarity to pollen allergens. The mRNA is cell-to-cell mobile. Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc05G0011180 AT1G78020.1 Protein of unknown function (DUF581) FCS like zinc finger 6 is induced during energy starvation through SnRK1 signaling. Mutants accumulate more SnRK1alpha1 which results in the inhibition of seedling growth under favorable growth conditions. Increased SnRK1 activity in the mutant also results in the downregulation of TOR signaling (DOI:10.1111/tpj.13854). senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc05G0011190 AT5G10170.1 myo-inositol-1-phosphate synthase 3 myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. myo-inositol-1-phosphate synthase 3;(source:Araport11) Ipc05G0011200 AT4G13830.2 DNAJ-like 20 DnaJ-like protein (J20); nuclear gene DNAJ-like 20;(source:Araport11) Ipc05G0011210 AT4G39810.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0011220 AT2G22250.1 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) Ipc05G0011230 AT4G39710.3 0 0 FK506-binding protein 16-2;(source:Araport11) Ipc05G0011240 AT4G39700.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0011250 AT5G10080.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0011260 AT2G01150.1 RING-H2 finger protein 2B Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils. RING-H2 finger protein 2B;(source:Araport11) Ipc05G0011270 AT3G26330.1 cytochrome P450, family 71, subfamily B, polypeptide 37 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 37;(source:Araport11) Ipc05G0011280 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc05G0011290 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc05G0011300 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc05G0011310 AT3G26310.1 cytochrome P450, family 71, subfamily B, polypeptide 35 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 35;(source:Araport11) Ipc05G0011320 AT5G07990.1 Cytochrome P450 superfamily protein Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile. Cytochrome P450 superfamily protein;(source:Araport11) Ipc05G0011330 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc05G0011340 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc05G0011350 AT3G53290.1 cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene;(source:Araport11) Ipc05G0011360 AT5G10020.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc05G0011370 AT5G64940.2 ABC2 homolog 13 ABC1K8 is a member of an atypical protein kinase family that is induced by heavy metals. Loss of function mutations affect the metabolic profile of chloroplast lipids. It appears to function along with ABC1K7 in mediating lipid membrane changes in response to stress. The mRNA is cell-to-cell mobile. ABC2 homolog 13;(source:Araport11) Ipc05G0011380 AT5G64880.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0011390 AT2G21990.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc05G0011400 AT2G21970.1 stress enhanced protein 2 stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein stress enhanced protein 2;(source:Araport11) Ipc05G0011410 AT5G57685.1 glutamine dumper 3 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 3;(source:Araport11) Ipc05G0011420 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc05G0011430 AT1G52540.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0011440 AT5G57670.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0011450 AT5G57660.1 CONSTANS-like 5 0 CONSTANS-like 5;(source:Araport11) Ipc05G0011460 AT5G57580.1 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc05G0011470 AT5G16550.1 0 Lipid droplet protein associated with LDAP3. voltage-dependent L-type calcium channel subunit;(source:Araport11) Ipc05G0011480 AT3G14730.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0011490 AT4G39640.2 gamma-glutamyl transpeptidase 1 The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast. gamma-glutamyl transpeptidase 1;(source:Araport11) Ipc05G0011500 AT5G52450.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc05G0011510 AT5G17050.1 UDP-glucosyl transferase 78D2 The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. UDP-glucosyl transferase 78D2;(source:Araport11) Ipc05G0011520 AT4G25770.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0011530 AT5G57655.2 xylose isomerase family protein 0 xylose isomerase family protein;(source:Araport11) Ipc05G0011540 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc05G0011550 AT1G77450.1 NAC domain containing protein 32 0 NAC domain containing protein 32;(source:Araport11) Ipc05G0011560 AT3G61920.1 0 0 UvrABC system protein C;(source:Araport11) Ipc05G0011570 AT5G57480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0011580 AT5G57420.1 indole-3-acetic acid inducible 33 Belongs to auxin inducible gene family. indole-3-acetic acid inducible 33;(source:Araport11) Ipc05G0011590 #N/A #N/A #N/A #N/A Ipc05G0011600 AT2G33585.2 0 0 subtilisin-like protease;(source:Araport11) Ipc05G0011610 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc05G0011620 AT2G07050.1 cycloartenol synthase 1 Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol. cycloartenol synthase 1;(source:Araport11) Ipc05G0011640 AT2G07050.2 0 Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol. cycloartenol synthase 1;(source:Araport11) Ipc05G0011630 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc05G0011650 AT5G57410.3 Afadin/alpha-actinin-binding protein Encodes a microtubule-associated protein. Afadin/alpha-actinin-binding protein;(source:Araport11) Ipc05G0011660 AT4G30200.3 vernalization5/VIN3-like Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus. vernalization5/VIN3-like protein;(source:Araport11) Ipc05G0011670 AT5G57370.1 0 0 U4/U6.U5 small nuclear ribonucleoprotein;(source:Araport11) Ipc05G0011680 AT5G20600.1 0 0 ribosomal RNA processing-like protein;(source:Araport11) Ipc05G0011690 AT2G18980.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0011700 AT5G57345.1 0 OXR is a single copy gene in Arabidopsis. It is localized to the ER. It is expressed throughout the plant and expression is induced in response to abiotic stress. While the function of OXR is unknown, overexpression results in increased abiotic stress tolerance and increased ascorbic acid content. transmembrane protein;(source:Araport11) Ipc05G0011710 AT4G30190.1 H(+)-ATPase 2 Belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal domain. Its plasma membrane localization is light-dependent. H[+]-ATPase 2;(source:Araport11) Ipc05G0011720 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc05G0011730 AT3G53090.2 ubiquitin-protein ligase 7 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. ubiquitin-protein ligase 7;(source:Araport11) Ipc05G0011740 AT3G59540.1 Ribosomal L38e protein family 0 Ribosomal L38e protein family;(source:Araport11) Ipc05G0011750 AT4G29850.1 Eukaryotic protein of unknown function (DUF872) 0 transmembrane protein (DUF872);(source:Araport11) Ipc05G0011760 AT4G19540.1 INDH1(iron-sulfur protein required for NADH dehydrogenase) Encodes a iron-suflur protein required for NADH dehydrogenase. INDH1(iron-sulfur protein required for NADH dehydrogenase);(source:Araport11) Ipc05G0011770 AT5G57160.1 DNA ligase IV Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4. DNA ligase IV;(source:Araport11) Ipc05G0011780 AT5G57150.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0011790 AT3G28430.1 0 Encodes a peripheral membrane protein localized at the Golgi apparatus that is involved in membrane trafficking, vacuole development and in flavonoid accumulation in the seed coat. Mutant seed color is pale brown. CLEC16A-like protein;(source:Araport11) Ipc05G0011800 AT5G57110.3 0 Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. autoinhibited Ca2+ -ATPase, isoform 8;(source:Araport11) Ipc05G0011810 AT1G71890.1 Major facilitator superfamily protein Encodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation. Major facilitator superfamily protein;(source:Araport11) Ipc05G0011820 AT3G21180.1 autoinhibited Ca(2+)-ATPase 9 one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain. autoinhibited Ca(2+)-ATPase 9;(source:Araport11) Ipc05G0011830 AT4G30160.4 0 Encodes a major actin filament bundling protein that is involved in root hair growth through regulating actin organization in a Ca2+-dependent manner. villin 4;(source:Araport11) Ipc05G0011840 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0011850 AT1G16840.4 0 0 hypothetical protein;(source:Araport11) Ipc04G0002960 AT3G21480.1 BRCT domain-containing DNA repair protein 0 BRCT domain-containing DNA repair protein;(source:Araport11) Ipc04G0002970 AT5G23750.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc04G0002980 AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein RPF3 encodes a pentatricopeptide repeat (PPR) protein involved in 5' processing of different mitochondrial mRNAs. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0002990 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003000 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0003010 AT5G16800.3 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0003020 AT1G54450.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0003030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003040 AT2G26135.1 RING/U-box protein with C6HC-type zinc finger 0 RING/U-box protein with C6HC-type zinc finger;(source:Araport11) Ipc04G0003050 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc01G0027630 AT4G33970.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0002630 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003060 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0003070 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003080 AT4G39500.2 0 0 cytochrome P450, family 96, subfamily A, polypeptide 11;(source:Araport11) Ipc04G0003100 AT3G06330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0003110 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0003120 AT3G24160.1 putative type 1 membrane protein Encodes a putative Type 1 membrane protein (PMP). putative type 1 membrane protein;(source:Araport11) Ipc04G0003130 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0003140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002730 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0003150 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc12G0005250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0005270 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0005280 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0005290 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0005300 AT5G52670.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc12G0005310 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc15G0011600 AT1G48840.1 Plant protein of unknown function (DUF639) 0 Plant protein of unknown function (DUF639);(source:TAIR10) Ipc15G0011590 AT3G18400.1 NAC domain containing protein 58 0 NAC domain containing protein 58;(source:Araport11) Ipc15G0011580 AT1G73930.2 0 0 polarity axis stabilization protein;(source:Araport11) Ipc15G0011570 AT1G67260.3 0 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc15G0011560 AT1G67220.1 histone acetyltransferase of the CBP family 2 0 histone acetyltransferase of the CBP family 2;(source:Araport11) Ipc15G0011550 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0011540 AT1G73960.1 TBP-associated factor 2 0 TBP-associated factor 2;(source:Araport11) Ipc15G0011530 AT2G38410.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc15G0011520 AT1G73965.1 CLAVATA3/ESR-RELATED 13 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 13;(source:Araport11) Ipc15G0011510 AT4G24680.5 0 Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 associates with the promoter of SNC1 and regulates its expression. modifier of snc1;(source:Araport11) Ipc15G0011500 AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein 0 PLAT/LH2 domain-containing lipoxygenase family protein;(source:Araport11) Ipc15G0011490 AT1G34390.1 auxin response factor 22 0 auxin response factor 22;(source:Araport11) Ipc15G0011480 AT1G49000.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0011470 AT1G26110.2 decapping 5 Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5;(source:Araport11) Ipc15G0011460 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0011450 AT4G34940.1 armadillo repeat only 1 Armadillo repeat protein. One of a family of four in Arabidopsis. Located in the nucleus and cytoplasm of pollen vegetative cells, and in the cytoplasm of egg cells. Involved in the signaling network controlling tip growth and actin organization in the pollen tube. armadillo repeat only 1;(source:Araport11) Ipc15G0011440 AT5G23090.4 nuclear factor Y, subunit B13 0 nuclear factor Y, subunit B13;(source:Araport11) Ipc15G0011430 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc15G0011420 AT1G77220.1 Protein of unknown function (DUF300) LAZ1H1 is a DUF300 that is localized to the tonoplast. Along with LAZ1 it appears to play a role in maintaining the structural integrity of vacuoles and regulating BR signaling by modulating downstream subcellular distribution of BAK1. organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc15G0011410 AT4G14620.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc15G0011400 AT4G31080.1 Protein of unknown function (DUF2296) Encodes one of two LUNAPARK proteins in Arabidopsis. Both LNPA and LNPB are predominantly distributed throughout the ER, but not preferentially localized at the three-way junctions. Mutation of both LNPA and LNPB together caused the cortical ER to develop poor ER cisternae and a less dense tubular network. integral membrane metal-binding family protein (DUF2296);(source:Araport11) Ipc15G0011390 AT1G48880.1 TRICHOME BIREFRINGENCE-LIKE 7 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 7;(source:Araport11) Ipc15G0011380 AT5G13170.1 senescence-associated gene 29 Encodes a member of the SWEET sucrose efflux transporter family proteins. senescence-associated gene 29;(source:Araport11) Ipc15G0011370 AT4G17770.2 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms.The mRNA is cell-to-cell mobile. trehalose phosphatase/synthase 5;(source:Araport11) Ipc15G0011360 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc15G0011350 AT5G13170.1 senescence-associated gene 29 Encodes a member of the SWEET sucrose efflux transporter family proteins. senescence-associated gene 29;(source:Araport11) Ipc15G0011340 AT5G17520.1 root cap 1 (RCP1) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. root cap 1 (RCP1);(source:Araport11) Ipc15G0011330 AT1G77110.1 Auxin efflux carrier family protein Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux. Auxin efflux carrier family protein;(source:Araport11) Ipc15G0011320 AT4G08350.1 global transcription factor group A2 0 global transcription factor group A2;(source:Araport11) Ipc15G0011310 AT2G19400.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc15G0011300 AT3G09100.2 mRNA capping enzyme family protein 0 mRNA capping enzyme family protein;(source:Araport11) Ipc15G0011290 AT1G21460.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc15G0011280 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0011270 AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0011260 AT5G51230.1 VEFS-Box of polycomb protein Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. VEFS-Box of polycomb protein;(source:Araport11) Ipc15G0011250 AT1G54870.2 0 ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc15G0011240 AT1G54860.1 Glycoprotein membrane precursor GPI-anchored 0 Glycoprotein membrane precursor GPI-anchored;(source:Araport11) Ipc15G0011230 AT5G27450.3 mevalonate kinase Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway. mevalonate kinase;(source:Araport11) Ipc15G0011220 AT5G40500.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0011210 AT3G07050.1 GTP-binding family protein Arabidopsis NSN1 encodes a nucleolar GTP- binding protein and is required for maintenance of inflorescence meristem identity and floral organ development. GTP-binding family protein;(source:Araport11) Ipc15G0011200 AT5G26760.1 0 Encodes RPAP2 IYO Mate (RIMA), a homologue of yeast and human proteins linked to nuclear import of selective cargo. Knockdown of RIMA causes delayed onset of cell differentiation. RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein;(source:Araport11) Ipc15G0011190 AT1G59359.1 Ribosomal protein S5 family protein 0 Ribosomal protein S5 family protein;(source:Araport11) Ipc15G0011180 AT1G77410.1 beta-galactosidase 16 0 beta-galactosidase 16;(source:Araport11) Ipc15G0011170 AT1G44110.1 Cyclin A1;1 0 Cyclin A1;(source:Araport11) Ipc15G0011160 AT1G44110.1 Cyclin A1;1 0 Cyclin A1;(source:Araport11) Ipc15G0011150 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0011140 AT2G46910.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc15G0011130 AT1G77380.1 amino acid permease 3 Amino acid permease which transports basic amino acids. amino acid permease 3;(source:Araport11) Ipc15G0011120 AT1G21780.2 BTB/POZ domain-containing protein BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B. BTB/POZ domain-containing protein;(source:Araport11) Ipc15G0011110 AT1G21760.1 F-box protein 7 This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures. The mRNA is cell-to-cell mobile. F-box protein 7;(source:Araport11) Ipc15G0011100 AT1G21740.1 Protein of unknown function (DUF630 and DUF632) 0 DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11) Ipc15G0011090 AT1G21740.1 Protein of unknown function (DUF630 and DUF632) 0 DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11) Ipc15G0011080 AT1G44170.2 aldehyde dehydrogenase 3H1 Encodes an aldehyde dehydrogenase induced by ABA and dehydration that can oxidize saturated aliphatic aldehydes. It is also able to oxidize beta-unsaturated aldehydes, but not aromatic aldehydes. Activity of ALDH3H1 is NAD +-dependent. aldehyde dehydrogenase 3H1;(source:Araport11) Ipc15G0011070 AT1G77470.1 replication factor C subunit 3 Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent. replication factor C subunit 3;(source:Araport11) Ipc15G0011060 AT1G01720.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. The mRNA is cell-to-cell mobile. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc15G0011050 AT3G01930.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0011040 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0011030 AT3G08880.1 0 Encodes a a kinetochore hub-protein that is required for chromosome segregation to ensure proper cell division and the maintenance of plant architecture. plectin-like protein;(source:Araport11) Ipc15G0011020 AT4G32720.2 La protein 1 Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis. La protein 1;(source:Araport11) Ipc15G0011010 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0011000 AT5G01550.1 lectin receptor kinase a4.1 Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. lectin receptor kinase a4.1;(source:Araport11) Ipc15G0010990 AT5G50640.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS/octicosapeptide/phox/Bemp1 domain protein;(source:Araport11) Ipc15G0010980 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0010970 AT4G38530.1 phospholipase C1 Encodes a putative phosphoinositide-specific phospholipase C. There are two genes called ATPLC1, one corresponding to AT4g38530 (this one) and one corresponding to AT5g58670. phospholipase C1;(source:Araport11) Ipc15G0010960 AT5G61220.3 0 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc15G0010950 AT3G48490.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0010940 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc15G0010930 AT5G20090.4 0 MPC1 negatively regulates ABA enhanced slow anion channel function during stomatal closure. Uncharacterized protein family (UPF0041);(source:Araport11) Ipc15G0010920 AT1G19290.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010910 AT1G79340.1 metacaspase 4 Encodes MCP2d, the predominant and constitutively expressed member of type II metacaspases (MCPs). MCP2d plays a positive regulatory role in biotic and abiotic stress-induced programmed cell death (PCD). Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a–f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. The mRNA is cell-to-cell mobile. metacaspase 4;(source:Araport11) Ipc15G0010900 AT1G70560.1 tryptophan aminotransferase of Arabidopsis 1 TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln. Lines carrying mutations in this gene are unaffected by auxin transporter inhibitor NPA. Double mutant analysis and exogenous auxin treatment suggest that this gene is required for auxin signaling during lateral root and root meristem development. tryptophan aminotransferase of Arabidopsis 1;(source:Araport11) Ipc15G0010890 AT1G16390.1 organic cation/carnitine transporter 3 0 organic cation/carnitine transporter 3;(source:Araport11) Ipc15G0010880 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0010870 AT1G16390.1 organic cation/carnitine transporter 3 0 organic cation/carnitine transporter 3;(source:Araport11) Ipc15G0010860 AT4G27190.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0010850 AT1G16390.1 organic cation/carnitine transporter 3 0 organic cation/carnitine transporter 3;(source:Araport11) Ipc15G0010840 AT1G79430.2 Homeodomain-like superfamily protein Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches. Homeodomain-like superfamily protein;(source:Araport11) Ipc15G0010830 AT1G79440.1 aldehyde dehydrogenase 5F1 Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004). aldehyde dehydrogenase 5F1;(source:Araport11) Ipc15G0010820 AT1G28570.1 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc15G0010810 AT2G13540.1 ARM repeat superfamily protein Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1). ARM repeat superfamily protein;(source:Araport11) Ipc15G0010800 AT1G56180.1 0 VIR3 encodes a putative chloroplast metalloprotease that is localized to the thylakoid membrane. The vir3-1 mutant came out of a genetic suppressor screen of the Arabidopsis variegation mutant yellow variegated (var2). The suppressor displayed an additional virescent phenotype, i.e. the bases of young leaves were yellow, and leaf color gradually turned to green toward the leaf tips. ATP-dependent zinc metalloprotease;(source:Araport11) Ipc15G0010790 AT1G16490.1 myb domain protein 58 Member of the R2R3 factor gene family. myb domain protein 58;(source:Araport11) Ipc15G0010780 AT1G56130.2 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0010770 AT1G56130.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0010760 AT1G56130.2 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0010750 AT1G56130.2 0 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0010740 AT1G56140.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc15G0010730 AT3G12870.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0010720 AT2G43000.1 NAC domain containing protein 42 Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2). Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses. NAC domain containing protein 42;(source:Araport11) Ipc15G0010710 AT1G56070.3 0 encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc15G0010700 AT5G51230.1 VEFS-Box of polycomb protein Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3. VEFS-Box of polycomb protein;(source:Araport11) Ipc15G0010690 AT3G26782.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0010680 AT1G56070.3 0 encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc15G0010670 AT2G32190.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc15G0010660 AT2G32190.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc15G0010650 AT3G12960.1 0 0 seed maturation protein;(source:Araport11) Ipc15G0010640 AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010630 AT5G09530.1 hydroxyproline-rich glycoprotein family protein The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0010620 AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010610 AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010600 AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010590 AT1G56020.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc15G0010580 AT1G17330.1 Metal-dependent phosphohydrolase 0 Metal-dependent phosphohydrolase;(source:Araport11) Ipc15G0010570 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0010560 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0010550 AT5G02270.1 non-intrinsic ABC protein 9 member of NAP subfamily non-intrinsic ABC protein 9;(source:Araport11) Ipc15G0010540 AT1G16650.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0010530 AT1G56010.2 NAC domain containing protein 1 Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). NAC1 (NAC1) NAC domain containing protein 1;(source:Araport11) Ipc15G0010520 AT1G79040.1 photosystem II subunit R Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ. photosystem II subunit R;(source:Araport11) Ipc15G0010510 AT1G16670.1 Protein kinase superfamily protein Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress. Protein kinase superfamily protein;(source:Araport11) Ipc15G0010500 AT5G56260.5 0 0 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase;(source:Araport11) Ipc15G0010490 AT1G55610.2 BRI1 like mutant has Altered vascular cell differentiation; LRR Receptor Kinase BRI1 like;(source:Araport11) Ipc15G0010480 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0010470 AT5G56270.1 WRKY DNA-binding protein 2 Encodes WRKY transcription factor 2, a zinc-finger protein. In wrky2 mutants, egg cells polarize normally but zygotes fail to reestablish polar organelle positioning from a transient symmetric state, resulting in equal cell division and distorted embryo development. WRKY DNA-binding protein 2;(source:Araport11) Ipc15G0010460 AT4G26450.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0010450 AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain 0 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc15G0010440 AT5G56180.1 actin-related protein 8 encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes. actin-related protein 8;(source:Araport11) Ipc15G0010430 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0010420 AT5G56170.1 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 0 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1;(source:Araport11) Ipc15G0010410 AT5G56140.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc15G0010400 AT3G13330.1 proteasome activating protein 200 Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor. proteasome activating protein 200;(source:Araport11) Ipc15G0010390 AT3G13300.2 Transducin/WD40 repeat-like superfamily protein Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0010380 AT3G13310.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc15G0010370 AT3G13275.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0010360 AT1G55750.6 0 0 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins);(source:Araport11) Ipc15G0010350 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc15G0010340 AT4G35540.1 zinc ion binding;transcription regulators Encodes a novel plant-specific TFIIB-related protein that can interact with TBP2 and bind DNA. It can also form a homodimer and interact with the subunits of RNA polymerases. Mutant pollen fails to germinate. POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2;(source:Araport11) Ipc15G0010330 AT1G55760.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc15G0010320 AT5G67580.2 Homeodomain-like/winged-helix DNA-binding family protein Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc15G0010310 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc15G0010300 AT3G20180.3 0 0 Copper transport protein family;(source:Araport11) Ipc15G0010290 AT1G55790.1 Domain of unknown function (DUF2431) 0 ferredoxin-fold anticodon-binding domain protein;(source:Araport11) Ipc15G0010280 AT3G20180.3 0 0 Copper transport protein family;(source:Araport11) Ipc15G0010270 AT3G20180.3 0 0 Copper transport protein family;(source:Araport11) Ipc15G0010260 AT5G61800.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0010250 AT4G36740.2 0 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 40;(source:Araport11) Ipc15G0010240 AT5G56000.1 HEAT SHOCK PROTEIN 81.4 0 HEAT SHOCK PROTEIN 81.4;(source:Araport11) Ipc15G0010230 AT5G56000.1 HEAT SHOCK PROTEIN 81.4 0 HEAT SHOCK PROTEIN 81.4;(source:Araport11) Ipc15G0010220 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0010210 AT5G56000.1 HEAT SHOCK PROTEIN 81.4 0 HEAT SHOCK PROTEIN 81.4;(source:Araport11) Ipc15G0010200 AT2G02910.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc15G0010190 AT4G26570.1 calcineurin B-like 3 member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) calcineurin B-like 3;(source:Araport11) Ipc15G0010180 AT5G55960.1 0 0 transmembrane protein C9orf5 protein;(source:Araport11) Ipc15G0010170 AT1G55865.1 0 0 ubiquitin-protein ligase;(source:Araport11) Ipc15G0010160 AT1G55860.1 ubiquitin-protein ligase 1 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. LOW protein: E3 ubiquitin ligase-like protein;(source:Araport11) Ipc15G0010150 AT1G55840.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc15G0010140 AT5G47750.1 D6 protein kinase like 2 D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism. D6 protein kinase like 2;(source:Araport11) Ipc15G0010130 AT1G60620.1 RNA polymerase I subunit 43 0 RNA polymerase I subunit 43;(source:Araport11) Ipc15G0010120 AT3G29170.2 0 0 transmembrane protein (DUF872);(source:Araport11) Ipc15G0010110 AT3G07660.1 Kinase-related protein of unknown function (DUF1296) 0 flocculation protein (DUF1296);(source:Araport11) Ipc15G0010100 AT2G29570.1 proliferating cell nuclear antigen 2 Functionally interacts with POLH to repair DNA damaged by UVB damage. May be sumoylated. proliferating cell nuclear antigen 2;(source:Araport11) Ipc15G0010090 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc15G0010080 AT5G55810.1 nicotinate/nicotinamide mononucleotide adenyltransferase encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity. nicotinate/nicotinamide mononucleotide adenyltransferase;(source:Araport11) Ipc15G0010070 AT5G55760.1 sirtuin 1 Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230). sirtuin 1;(source:Araport11) Ipc15G0010060 AT5G55730.2 FASCICLIN-like arabinogalactan 1 Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration. FASCICLIN-like arabinogalactan 1;(source:Araport11) Ipc15G0010050 AT4G14540.1 nuclear factor Y, subunit B3 0 nuclear factor Y, subunit B3;(source:Araport11) Ipc15G0010040 AT5G55660.1 DEK domain-containing chromatin associated protein 0 DEK domain-containing chromatin associated protein;(source:Araport11) Ipc15G0010030 AT1G55880.1 Pyridoxal-5'-phosphate-dependent enzyme family protein 0 Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc15G0010020 AT1G55900.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein component of a translocase in the mitochondrial inner membrane Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc15G0010010 AT1G55915.4 0 DNA-protein crosslink repair protease. WSS1A is involved in DNA-protein crosslink (DPC) repair and acts in independent pathways of the nuclease MUS81 and the phosphodiesterase TDP1. WSS1A is involved in the repair of replicative DNA damage (determination of dead cells in the root meristem using propidium Iodide staining). CRISPR wss1A mutants are camptothecin (CPT) and cis-platin hypersensitive and exhibit a fasciated growth phenotype and shortened roots zinc ion binding protein;(source:Araport11) Ipc15G0010000 AT2G29880.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc15G0009990 AT3G13120.3 0 0 Ribosomal protein S10p/S20e family protein;(source:Araport11) Ipc15G0009980 AT5G55590.1 Pectin lyase-like superfamily protein Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc15G0009970 AT3G63380.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc15G0009960 AT3G20170.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0009950 AT4G26640.2 WRKY family transcription factor family protein member of WRKY Transcription Factor; Group I WRKY family transcription factor family protein;(source:Araport11) Ipc15G0009940 AT5G55560.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0009930 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0009920 AT5G55530.3 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc15G0009910 AT3G22250.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0009900 AT1G50590.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc15G0009890 AT5G55290.3 0 0 ATPase, V0 complex, subunit E;(source:Araport11) Ipc15G0009880 AT5G55280.1 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1;(source:Araport11) Ipc15G0009870 AT1G04950.3 TATA BOX ASSOCIATED FACTOR II 59 Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant. TATA BOX ASSOCIATED FACTOR II 59;(source:Araport11) Ipc15G0009860 AT1G79590.3 0 Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. syntaxin of plants 52;(source:Araport11) Ipc15G0009850 AT1G50620.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc15G0009840 AT5G55250.1 IAA carboxylmethyltransferase 1 Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D. IAA carboxylmethyltransferase 1;(source:Araport11) Ipc15G0009830 AT4G26750.1 hydroxyproline-rich glycoprotein family protein Encodes a protein involved in mediating plant responses to pathogenesis. Loss of function mutations have increased susceptibility to bacterial pathogens and are defective in pathogen induced endocytosis and vesicle trafficking. LIP5 physically interacts with SKD1 and that interaction is required for its resistance phenotype. LIP5 is phosphorylated by MPK3 and MPK6, both of which are components of the disease resistance pathway. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0009820 AT5G55230.3 0 Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution. microtubule-associated proteins 65-1;(source:Araport11) Ipc15G0009810 AT5G55220.1 trigger factor type chaperone family protein 0 trigger factor type chaperone family protein;(source:Araport11) Ipc15G0009800 AT2G36560.1 AT hook motif DNA-binding family protein A paternally expressed imprinted gene. AT hook motif DNA-binding family protein;(source:Araport11) Ipc15G0009790 AT4G22320.1 0 0 golgin family A protein;(source:Araport11) Ipc15G0009780 AT3G20290.3 0 Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520). EPS15 homology domain 1;(source:Araport11) Ipc15G0009770 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc15G0009760 AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein Pentatricopeptide Repeat Protein involved in splicing of nad4, nad 5 and nad2 introns which affects biogenesis of the respiratory complex I. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc15G0009750 AT5G55180.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc15G0009740 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc15G0009730 AT5G55160.1 small ubiquitin-like modifier 2 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. small ubiquitin-like modifier 2;(source:Araport11) Ipc15G0009720 AT2G32990.1 glycosyl hydrolase 9B8 0 glycosyl hydrolase 9B8;(source:Araport11) Ipc15G0009710 AT5G32590.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc15G0009700 AT5G55130.1 co-factor for nitrate, reductase and xanthine dehydrogenase 5 putative molybdopterin synthase sulphurylase (cnx5) co-factor for nitrate, reductase and xanthine dehydrogenase 5;(source:Araport11) Ipc15G0009690 AT3G21610.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc15G0009680 AT5G57510.1 0 0 cotton fiber protein;(source:Araport11) Ipc15G0009670 AT3G20800.1 Cell differentiation, Rcd1-like protein 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc15G0009660 AT4G26860.1 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0 Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11) Ipc15G0009650 AT1G50720.1 Stigma-specific Stig1 family protein 0 Stigma-specific Stig1 family protein;(source:Araport11) Ipc15G0009640 AT3G14180.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc15G0009630 AT5G55090.1 mitogen-activated protein kinase kinase kinase 15 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15;(source:Araport11) Ipc15G0009620 AT4G26910.2 Dihydrolipoamide succinyltransferase 0 Dihydrolipoamide succinyltransferase;(source:Araport11) Ipc15G0009610 AT1G50732.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0009600 AT5G55040.2 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc15G0009590 AT1G05170.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc15G0009580 AT4G38460.1 geranylgeranyl reductase Encodes a type II small subunit of the heteromeric geranyl(geranyl) diphosphate synthase that is localized to the chloroplast, expressed in petals and sepals and is involved in monoterpene biosynthesis. The mRNA is cell-to-cell mobile. geranylgeranyl reductase;(source:Araport11) Ipc15G0009570 AT4G04630.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc15G0009560 AT4G04640.1 ATPase, F1 complex, gamma subunit protein One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. ATPase, F1 complex, gamma subunit protein;(source:Araport11) Ipc15G0009550 AT5G54940.3 0 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc15G0009540 AT3G20410.2 0 calmodulin-domain protein kinase CDPK isoform 9 (CPK9) calmodulin-domain protein kinase 9;(source:Araport11) Ipc15G0009530 AT3G20340.1 0 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. protein expression protein;(source:Araport11) Ipc15G0009520 AT3G20340.1 0 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. protein expression protein;(source:Araport11) Ipc15G0009510 AT4G30580.1 Phospholipid/glycerol acyltransferase family protein Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal. Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc15G0009500 AT4G27040.6 0 0 EAP30/Vps36 family protein;(source:Araport11) Ipc15G0009490 AT4G27030.1 fatty acid desaturase A Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol. The mRNA is cell-to-cell mobile. fatty acid desaturase A;(source:Araport11) Ipc15G0009480 AT3G20510.1 Transmembrane proteins 14C Encodes a member of the Tmemb_14 family that is predicted to be localized to the membranes of the secretory pathway. The mRNA is cell-to-cell mobile. Transmembrane proteins 14C;(source:Araport11) Ipc15G0009470 AT3G20500.1 purple acid phosphatase 18 0 purple acid phosphatase 18;(source:Araport11) Ipc15G0009460 AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes an RNA binding protein with three RNA recognition motifs. The mRNA is cell-to-cell mobile. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0009450 AT5G54930.1 AT hook motif-containing protein 0 AT hook motif-containing protein;(source:Araport11) Ipc15G0009440 AT3G27460.5 0 0 SGF29 tudor-like domain-containing protein;(source:Araport11) Ipc15G0009430 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc15G0009420 AT1G50830.1 Aminotransferase-like, plant mobile domain family protein 0 Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc15G0009410 AT4G27060.1 ARM repeat superfamily protein Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction. ARM repeat superfamily protein;(source:Araport11) Ipc15G0009400 AT5G54850.1 0 0 hexon;(source:Araport11) Ipc15G0009390 AT3G47860.1 chloroplastic lipocalin Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light. LCNP is required for sustained photoprotective energy dissipation or NPQ (qH) to occur (PMID:29233855). chloroplastic lipocalin;(source:Araport11) Ipc15G0009380 AT1G24190.1 SIN3-like 3 Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19. SIN3-like 3;(source:Araport11) Ipc15G0009370 AT4G27070.1 tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. The mRNA is cell-to-cell mobile. tryptophan synthase beta-subunit 2;(source:Araport11) Ipc15G0009360 AT3G15160.1 0 0 AP-5 complex subunit zeta-1;(source:Araport11) Ipc15G0009350 AT4G21750.4 0 Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene Primes spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc15G0009340 AT3G20560.1 PDI-like 5-3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). PDI-like 5-3;(source:Araport11) Ipc15G0009330 AT3G20570.1 early nodulin-like protein 9 0 early nodulin-like protein 9;(source:Araport11) Ipc15G0009320 AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc15G0009310 AT4G27130.1 Translation initiation factor SUI1 family protein 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc15G0009300 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc15G0009290 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc15G0009280 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc15G0009270 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc15G0009260 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc15G0009250 AT3G26320.1 cytochrome P450, family 71, subfamily B, polypeptide 36 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 36;(source:Araport11) Ipc15G0009240 AT4G05320.4 polyubiquitin 10 One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. The mRNA is cell-to-cell mobile. polyubiquitin 10;(source:Araport11) Ipc15G0009230 AT5G54750.1 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc15G0009220 AT3G20600.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Required for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response. The mRNA is cell-to-cell mobile. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc15G0009210 AT4G04790.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0009200 AT5G54650.2 formin homology5 Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene. formin homology5;(source:Araport11) Ipc15G0009190 AT1G51060.1 histone H2A 10 Encodes HTA10, a histone H2A protein. The mRNA is cell-to-cell mobile. histone H2A 10;(source:Araport11) Ipc15G0009180 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc15G0009170 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc15G0009160 AT5G54585.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0009150 AT5G54530.1 Protein of unknown function, DUF538 0 serine protease, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc15G0009120 #N/A #N/A #N/A #N/A Ipc15G0009140 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc15G0009130 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc15G0009110 AT5G54510.1 Auxin-responsive GH3 family protein Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). Auxin-responsive GH3 family protein;(source:Araport11) Ipc15G0009100 AT3G20640.4 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0009090 AT4G27270.1 Quinone reductase family protein 0 Quinone reductase family protein;(source:Araport11) Ipc15G0009080 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009070 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009060 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009050 AT4G01590.2 0 0 DNA-directed RNA polymerase III subunit;(source:Araport11) Ipc15G0009040 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009030 AT4G27300.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009020 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009010 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0009000 AT1G65790.1 receptor kinase 1 An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. receptor kinase 1;(source:Araport11) Ipc15G0008990 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0008980 ATCG00680.1 photosystem II reaction center protein B encodes for CP47, subunit of the photosystem II reaction center. photosystem II reaction center protein B;(source:Araport11) Ipc15G0008970 AT4G23130.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) cysteine-rich RLK (RECEPTOR-like protein kinase) 5;(source:Araport11) Ipc15G0008960 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0008950 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0008940 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0008930 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc15G0008920 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0008910 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc15G0008900 AT5G06150.2 0 Encodes a cyclin whose expression is reduced in response to high salt. Cyclin family protein;(source:Araport11) Ipc15G0008890 AT5G08240.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0008880 AT5G45470.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc15G0008870 AT2G20900.3 diacylglycerol kinase 5 0 diacylglycerol kinase 5;(source:Araport11) Ipc15G0008860 AT4G10265.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc15G0008850 AT4G10270.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc15G0008840 AT4G10270.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Wound-responsive family protein;(source:Araport11) Ipc15G0008830 AT5G54110.1 membrane-associated mannitol-induced Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking. The mRNA is cell-to-cell mobile. membrane-associated mannitol-induced;(source:Araport11) Ipc15G0008820 AT2G20810.1 galacturonosyltransferase 10 Galacturonosyltransferase,regulator of root meristem maintenance. galacturonosyltransferase 10;(source:Araport11) Ipc15G0008810 AT5G54280.2 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc15G0008800 AT3G16857.3 0 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 1;(source:Araport11) Ipc15G0008790 AT2G25735.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0008780 AT1G79915.1 Putative methyltransferase family protein 0 Putative methyltransferase family protein;(source:Araport11) Ipc15G0008770 AT2G17240.1 0 0 arginine/serine-rich-like splicing factor;(source:Araport11) Ipc15G0008760 AT3G16080.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc15G0008750 AT1G52280.1 RAB GTPase homolog G3D 0 RAB GTPase homolog G3D;(source:Araport11) Ipc15G0008740 AT1G45688.1 0 CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress. transmembrane protein;(source:Araport11) Ipc15G0008730 AT1G52245.1 0 0 dynein light chain LC6, flagellar outer arm-like protein;(source:Araport11) Ipc15G0008720 AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein Hydroxyphenylpyruvate reductase (HPPR), which catalyzes the reduction of 4-hydroxyphenylpyruvic acid (pHPP) to 4-hydroxyphenyllactic acid (pHPL). Together with HPPR3 and TAT1 involved in the biosynthesis of pHPL from tyrosine. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc15G0008710 AT1G79860.1 RHO guanyl-nucleotide exchange factor 12 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth. RHO guanyl-nucleotide exchange factor 12;(source:Araport11) Ipc15G0008700 AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER. HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein;(source:Araport11) Ipc15G0008690 AT1G52220.1 0 0 CURVATURE THYLAKOID protein;(source:Araport11) Ipc15G0008680 AT1G79820.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0008670 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc15G0008660 AT1G79810.1 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes. Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc15G0008650 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0008640 AT3G16240.1 delta tonoplast integral protein Delta tonoplast intrinsic protein, functions as a water channel and ammonium (NH3) transporter. Highly expressed in flower, shoot, and stem. Expression shows diurnal regulation and is induced by ammonium (NH3). Protein localized to vacuolar membrane. The mRNA is cell-to-cell mobile. delta tonoplast integral protein;(source:Araport11) Ipc15G0008630 AT2G32320.1 tRNAHis guanylyltransferase Interacts genetically with its homolog ICA1; alters growth and flowering time plasticity in relation to temperature. Mutants display effects on growth, flowering and plant development, and ploidy level depending on ambient temperature (effects specific at >27C). tRNAHis guanylyltransferase;(source:Araport11) Ipc15G0008620 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0008610 AT1G79800.1 early nodulin-like protein 7 0 early nodulin-like protein 7;(source:Araport11) Ipc15G0008600 AT4G33467.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0008590 AT4G32890.1 GATA transcription factor 9 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 9;(source:Araport11) Ipc15G0008580 AT1G11530.1 C-terminal cysteine residue is changed to a serine 1 Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity. The mRNA is cell-to-cell mobile. C-terminal cysteine residue is changed to a serine 1;(source:Araport11) Ipc15G0008570 AT3G16330.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc10G0013520 AT4G06526.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc10G0013530 AT2G40390.1 0 0 neuronal PAS domain protein;(source:Araport11) Ipc10G0013540 #N/A #N/A #N/A #N/A Ipc10G0013550 AT3G30530.1 basic leucine-zipper 42 0 basic leucine-zipper 42;(source:Araport11) Ipc10G0013560 AT1G26230.1 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230). TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc10G0013570 AT1G26220.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc10G0013580 AT3G02360.2 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc10G0013590 AT5G38790.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0013600 AT1G13580.3 LAG1 longevity assurance homolog 3 Encodes a ceramide synthase that together with LOH1 is essential for production of ceramides containing Very Long Chain Fatty acid VLCFA-Ceramides(mainly C 22 to 26). LAG1 longevity assurance-like protein;(source:Araport11) Ipc10G0013610 AT3G25545.1 0 0 trigger factor;(source:Araport11) Ipc10G0013620 AT1G26190.1 Phosphoribulokinase / Uridine kinase family TTM2 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity.It contains both a uridine kinase (UK) domain and CYTH domain. TTM2 is involved in negative regulation defense response to pathogens (PMID:28733390). Phosphoribulokinase / Uridine kinase family;(source:Araport11) Ipc10G0013630 AT3G05975.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc10G0013650 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0013640 AT3G24880.3 0 Encodes a nuclear localized protein of unknown function that interacts with components of the NuA4 histone acetyltransferase complex. I Helicase/SANT-associated, DNA binding protein;(source:Araport11) Ipc10G0013660 AT1G13570.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0013670 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0013680 AT2G34680.2 0 isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc10G0013690 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0013700 AT3G25560.1 NSP-interacting kinase 2 0 NSP-interacting kinase 2;(source:Araport11) Ipc10G0013710 AT3G25570.2 Adenosylmethionine decarboxylase family protein 0 Adenosylmethionine decarboxylase family protein;(source:Araport11) Ipc10G0013720 AT1G67260.3 0 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc10G0013730 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0013740 AT1G26180.1 0 0 membrane protein;(source:Araport11) Ipc10G0013750 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0013760 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0013770 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc10G0013780 AT1G59620.1 Disease resistance protein (CC-NBS-LRR class) family Encodes CW9. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0013790 AT1G59780.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc10G0013800 AT1G13480.1 Protein of unknown function (DUF1262) 0 hypothetical protein (DUF1262);(source:Araport11) Ipc10G0013810 AT1G26170.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0013820 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc10G0013830 AT1G15100.1 RING-H2 finger A2A Encodes a putative RING-H2 finger protein RHA2a. RING-H2 finger A2A;(source:Araport11) Ipc10G0013840 AT4G21240.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0013850 AT3G57590.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0013860 AT3G57590.2 0 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0013870 AT1G26160.1 Metal-dependent phosphohydrolase 0 Metal-dependent phosphohydrolase;(source:Araport11) Ipc10G0013880 AT1G68690.3 0 Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). Protein kinase superfamily protein;(source:Araport11) Ipc10G0013890 AT1G68710.2 0 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc10G0013900 AT5G62580.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0013910 AT2G33775.1 ralf-like 19 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 19;(source:Araport11) Ipc10G0013920 AT3G29780.1 ralf-like 27 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 27;(source:Araport11) Ipc10G0013930 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc10G0013940 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc10G0013950 AT3G25620.2 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc10G0013960 AT1G68750.1 phosphoenolpyruvate carboxylase 4 Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed. phosphoenolpyruvate carboxylase 4;(source:Araport11) Ipc10G0013970 AT1G68760.1 nudix hydrolase 1 Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway. nudix hydrolase 1;(source:Araport11) Ipc10G0013980 AT1G68760.1 nudix hydrolase 1 Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway. nudix hydrolase 1;(source:Araport11) Ipc10G0013990 AT3G25640.2 0 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc10G0014000 AT1G26110.1 decapping 5 Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5;(source:Araport11) Ipc10G0014010 AT1G26110.1 decapping 5 Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5;(source:Araport11) Ipc10G0014020 AT1G68800.2 0 Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12;(source:Araport11) Ipc10G0014030 AT1G31320.1 LOB domain-containing protein 4 0 LOB domain-containing protein 4;(source:Araport11) Ipc10G0014040 AT5G22580.1 Stress responsive A/B Barrel Domain 0 Stress responsive A/B Barrel Domain-containing protein;(source:Araport11) Ipc10G0014050 AT3G44716.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0014060 AT2G27770.1 Plant protein of unknown function (DUF868) 0 DUF868 family protein (DUF868);(source:Araport11) Ipc10G0014070 AT5G22620.5 0 encodes a putative 2-carboxy-D-arabinitol 1-phosphate phosphatase phosphoglycerate/bisphosphoglycerate mutase family protein;(source:Araport11) Ipc10G0014080 AT1G08250.1 arogenate dehydratase 6 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays. arogenate dehydratase 6;(source:Araport11) Ipc10G0014090 AT3G60830.1 actin-related protein 7 Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission. actin-related protein 7;(source:Araport11) Ipc10G0014100 AT3G44735.2 PHYTOSULFOKINE 3 PRECURSOR Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. PHYTOSULFOKINE 3 PRECURSOR;(source:Araport11) Ipc10G0014110 AT4G27910.1 SET domain protein 16 Encodes a SET domain containing protein, putative H3K4 methyltransferase. SET domain protein 16;(source:Araport11) Ipc10G0014120 AT2G27830.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0014130 AT5G22740.1 cellulose synthase-like A02 Encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. CSLA2 synthesizes the backbone of galactoglucomannan in seed coat epidermal cells. Both CSLA2 and MUCI10, which may be part of a protein complex, are critical for mucilage architecture. cellulose synthase-like A02;(source:Araport11) Ipc10G0014140 AT4G25315.2 Expressed protein 0 Expressed protein;(source:Araport11) Ipc10G0014150 AT4G29940.2 pathogenesis related homeodomain protein A Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding. pathogenesis related homeodomain protein A;(source:Araport11) Ipc10G0014160 AT5G22760.3 0 0 PHD finger family protein;(source:Araport11) Ipc10G0014170 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc10G0014180 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc10G0014190 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc10G0014200 AT5G22790.1 reticulata-related 1 0 reticulata-related 1;(source:Araport11) Ipc10G0014210 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0014220 AT1G08200.1 UDP-D-apiose/UDP-D-xylose synthase 2 Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase. UDP-D-apiose/UDP-D-xylose synthase 2;(source:Araport11) Ipc10G0014230 AT5G22810.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like lipase/acylhydrolase superfamily protein;(source:Araport11) Ipc10G0014240 AT5G22830.2 0 Transmembrane magnesium transporter that is essential for chloroplast development and photosynthesis. One of nine family members. magnesium (Mg) transporter 10;(source:Araport11) Ipc10G0014250 AT3G44850.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0014260 AT2G27880.1 Argonaute family protein AGO5.Required for antiviral RNA silencing.Confers resistance to Potato virus X. Argonaute family protein;(source:Araport11) Ipc10G0014270 AT2G27880.1 Argonaute family protein AGO5.Required for antiviral RNA silencing.Confers resistance to Potato virus X. Argonaute family protein;(source:Araport11) Ipc10G0014280 AT2G27880.1 Argonaute family protein AGO5.Required for antiviral RNA silencing.Confers resistance to Potato virus X. Argonaute family protein;(source:Araport11) Ipc10G0014290 AT5G22850.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0014300 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc10G0014310 AT2G27920.1 serine carboxypeptidase-like 51 0 serine carboxypeptidase-like 51;(source:Araport11) Ipc10G0014320 AT5G02420.1 0 0 cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11) Ipc10G0014330 AT1G08170.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc10G0014340 AT2G27940.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0014350 AT2G27950.3 0 0 Ring/U-Box superfamily protein;(source:Araport11) Ipc10G0014360 AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc10G0014370 AT2G27970.1 CDK-subunit 2 0 CDK-subunit 2;(source:Araport11) Ipc10G0014380 AT3G44880.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein;(source:Araport11) Ipc10G0014390 AT2G28200.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc10G0014400 AT2G28190.1 copper/zinc superoxide dismutase 2 Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS. Overexpression of a miR398-resistant form of CSD2 leads to more dramatic improvements in stress (hight light, Cu2+ and methyl viologen) tolerance than overexpression of wild-type CSD2. The mRNA is cell-to-cell mobile. copper/zinc superoxide dismutase 2;(source:Araport11) Ipc10G0014410 AT3G27325.1 hydrolases, acting on ester bonds 0 hydrolases, acting on ester bond;(source:Araport11) Ipc10G0014420 AT2G36830.1 gamma tonoplast intrinsic protein Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems. The mRNA is cell-to-cell mobile. gamma tonoplast intrinsic protein;(source:Araport11) Ipc10G0014430 AT2G28160.1 FER-like regulator of iron uptake Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake. It is post-transcriptionally controlled. FER-like regulator of iron uptake;(source:Araport11) Ipc10G0014440 AT5G22920.1 CHY-type/CTCHY-type/RING-type Zinc finger protein Encodes a protein with sequence similarity to RING, zinc finger proteins. Loss of function mutations show reduced (15%) stomatal aperture under non stress conditions. CHY-type/CTCHY-type/RING-type Zinc finger protein;(source:Araport11) Ipc10G0014450 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc10G0014460 AT1G67260.1 TCP family transcription factor Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc10G0014470 AT3G45010.1 serine carboxypeptidase-like 48 0 serine carboxypeptidase-like 48;(source:Araport11) Ipc10G0014480 AT3G45010.1 serine carboxypeptidase-like 48 0 serine carboxypeptidase-like 48;(source:Araport11) Ipc10G0014490 AT3G45010.1 serine carboxypeptidase-like 48 0 serine carboxypeptidase-like 48;(source:Araport11) Ipc10G0014500 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc10G0014510 AT1G08110.4 lactoylglutathione lyase family protein / glyoxalase I family protein Encodes a Zn2+ dependent glyoxylase. lactoylglutathione lyase family protein / glyoxalase I family protein;(source:Araport11) Ipc10G0014520 AT5G60800.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc10G0014530 AT5G60790.1 ABC transporter family protein member of GCN subfamily ABC transporter family protein;(source:Araport11) Ipc10G0014540 AT5G61300.2 0 0 hypothetical protein;(source:Araport11) Ipc10G0014550 AT2G28085.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc10G0014560 AT2G28085.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc10G0014570 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0014580 AT2G28085.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc10G0014590 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0014600 #N/A #N/A #N/A #N/A Ipc10G0014610 AT2G36970.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc10G0014620 AT2G28070.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc10G0014630 AT5G03340.1 ATPase, AAA-type, CDC48 protein 0 ATPase, AAA-type, CDC48 protein;(source:Araport11) Ipc10G0014640 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0014650 AT5G60770.1 nitrate transporter 2.4 member of High affinity nitrate transporter family nitrate transporter 2.4;(source:Araport11) Ipc10G0014660 AT5G60770.1 nitrate transporter 2.4 member of High affinity nitrate transporter family nitrate transporter 2.4;(source:Araport11) Ipc10G0014670 AT1G08090.1 nitrate transporter 2:1 High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. nitrate transporter 2:1;(source:Araport11) Ipc10G0014680 AT1G08090.1 nitrate transporter 2:1 High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. nitrate transporter 2:1;(source:Araport11) Ipc10G0014690 #N/A #N/A #N/A #N/A Ipc10G0014700 AT2G28060.4 0 Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. 5-AMP-activated protein kinase beta-2 subunit protein;(source:Araport11) Ipc10G0014710 ATCG00810.1 ribosomal protein L22 encodes a chloroplast ribosomal protein L22, a constituent of the large subunit of the ribosomal complex ribosomal protein L22;(source:Araport11) Ipc10G0014720 AT5G60760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0014730 AT5G48430.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0014740 AT5G04250.2 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0014750 AT5G60740.1 ABC transporter family protein 0 ABC transporter family protein;(source:Araport11) Ipc10G0014760 AT1G80770.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0014770 AT2G27990.1 BEL1-like homeodomain 8 Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals. BEL1-like homeodomain 8;(source:Araport11) Ipc10G0014780 AT2G28250.6 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0014790 AT4G27490.4 0 0 3-5-exoribonuclease family protein;(source:Araport11) Ipc10G0014800 AT2G28260.1 cyclic nucleotide-gated channel 15 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 15;(source:Araport11) Ipc10G0014810 AT1G07705.2 NOT2 / NOT3 / NOT5 family 0 NOT2 / NOT3 / NOT5 family;(source:Araport11) Ipc10G0014820 AT2G01021.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0014830 AT3G27560.1 Protein kinase superfamily protein encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined. Protein kinase superfamily protein;(source:Araport11) Ipc10G0014840 AT5G62730.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0014850 AT5G60700.2 0 0 glycosyltransferase family protein 2;(source:Araport11) Ipc10G0014860 AT2G28310.3 Protein of unknown function (DUF707) 0 trimethylguanosine synthase (DUF707);(source:Araport11) Ipc10G0014870 AT2G28320.1 Pleckstrin homology (PH) and lipid-binding START domains-containing protein 0 Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11) Ipc10G0014880 AT1G08030.2 0 Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. TPST acts in the auxin pathway to maintain postembryonic root stem cell niche by defining the expression of the PLETHORA stem cell transcription factor genes. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques. TPST suppresses ethylene production through the action of PSK (phytosulfokine). tyrosylprotein sulfotransferase;(source:Araport11) Ipc10G0014890 AT1G08010.3 0 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 11;(source:Araport11) Ipc10G0014900 #N/A #N/A #N/A #N/A Ipc10G0014910 AT4G30080.1 auxin response factor 16 Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16;(source:Araport11) Ipc10G0014920 AT1G07990.1 SIT4 phosphatase-associated family protein 0 SIT4 phosphatase-associated family protein;(source:Araport11) Ipc10G0014930 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0014940 AT2G28370.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0014950 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0014960 AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc10G0014970 AT2G28380.1 dsRNA-binding protein 2 Encodes a cytoplasmic dsRNA-binding protein DRB2. A maternally expressed imprinted gene. DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels. dsRNA-binding protein 2;(source:Araport11) Ipc10G0014980 AT5G60680.1 Protein of unknown function, DUF584 0 transcription initiation factor TFIID subunit (Protein of unknown function, DUF584);(source:Araport11) Ipc10G0014990 AT2G37190.1 Ribosomal protein L11 family protein 0 Ribosomal protein L11 family protein;(source:Araport11) Ipc10G0015000 AT2G37170.2 0 a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev plasma membrane intrinsic protein 2;(source:Araport11) Ipc10G0015010 AT2G28410.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0015020 AT3G45230.1 hydroxyproline-rich glycoprotein family protein Encodes the arabinogalactan protein core of plant cell wall proteoglycan that contains arabinogalactan and cell wall matrix glycan pectin and/or xylan domains. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0015030 AT5G60590.2 DHBP synthase RibB-like alpha/beta domain 0 DHBP synthase RibB-like alpha/beta domain-containing protein;(source:Araport11) Ipc10G0015040 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc10G0015050 AT2G28450.1 zinc finger (CCCH-type) family protein 0 zinc finger (CCCH-type) family protein;(source:Araport11) Ipc10G0015060 AT3G50700.1 indeterminate(ID)-domain 2 zinc finger protein, similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2;(source:Araport11) Ipc10G0015070 AT1G61110.1 NAC domain containing protein 25 NAC transcription regulator. Regulates endosperm cell expansion during germination. NAC domain containing protein 25;(source:Araport11) Ipc10G0015080 AT1G24360.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0015090 AT3G20060.1 ubiquitin-conjugating enzyme19 Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus. ubiquitin-conjugating enzyme19;(source:Araport11) Ipc10G0015100 AT5G60460.2 0 0 Preprotein translocase Sec, Sec61-beta subunit protein;(source:Araport11) Ipc10G0015110 AT5G60450.2 0 Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. auxin response factor 4;(source:Araport11) Ipc10G0015120 AT3G45300.1 isovaleryl-CoA-dehydrogenase Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. The mRNA is cell-to-cell mobile. isovaleryl-CoA-dehydrogenase;(source:Araport11) Ipc10G0015130 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc10G0015140 AT5G60340.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a nuclear adenylate kinase that interacts with a putative homolog of Rps14, AtRPS14-1 and affects the elongation of cells in the stem. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0015150 AT3G52300.1 ATP synthase D chain, mitochondrial 0 ATP synthase D chain;(source:Araport11) Ipc10G0015160 AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc10G0015170 AT1G07900.1 LOB domain-containing protein 1 0 LOB domain-containing protein 1;(source:Araport11) Ipc10G0015180 AT1G29900.1 carbamoyl phosphate synthetase B Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins. carbamoyl phosphate synthetase B;(source:Araport11) Ipc10G0015190 AT5G60210.6 0 Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 5;(source:Araport11) Ipc10G0015200 AT1G27700.1 Syntaxin/t-SNARE family protein 0 Syntaxin/t-SNARE family protein;(source:Araport11) Ipc10G0015210 #N/A #N/A #N/A #N/A Ipc10G0015220 AT3G23890.2 topoisomerase II Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II;(source:Araport11) Ipc10G0015230 AT5G02960.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc10G0015240 AT2G28510.1 Dof-type zinc finger DNA-binding family protein DOF transcription factor with a conserved zinc finger (ZF) DNA-binding domain. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc10G0015250 AT2G28520.1 vacuolar proton ATPase A1 Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network. The mRNA is cell-to-cell mobile. vacuolar proton ATPase A1;(source:Araport11) Ipc10G0015260 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc10G0015270 AT3G45620.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0015280 AT5G60150.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0015290 AT1G07890.8 ascorbate peroxidase 1 Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. The mRNA is cell-to-cell mobile. ascorbate peroxidase 1;(source:Araport11) Ipc10G0015300 AT1G07890.8 ascorbate peroxidase 1 Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. The mRNA is cell-to-cell mobile. ascorbate peroxidase 1;(source:Araport11) Ipc10G0015310 AT5G60170.2 RNA binding (RRM/RBD/RNP motifs) family protein 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0015320 AT2G28550.3 related to AP2.7 0 related to AP2.7;(source:Araport11) Ipc10G0015330 AT2G28560.6 0 Encodes a protein of the RAD51B family involved in double stranded DNA repair. Homozygous mutant plants show increased sensitivity to mitomycin which induces DS breaks. DNA repair (Rad51) family protein;(source:Araport11) Ipc10G0015340 AT1G07850.1 Protein of unknown function (DUF604) 0 transferring glycosyl group transferase (DUF604);(source:Araport11) Ipc10G0015350 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0015360 AT3G18760.1 Translation elongation factor EF1B/ribosomal protein S6 family protein 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc10G0015370 AT1G07670.2 0 TPLATE complex protein involved in clathrin-mediated endocytosis. endomembrane-type CA-ATPase 4;(source:Araport11) Ipc10G0015380 AT1G07670.2 0 TPLATE complex protein involved in clathrin-mediated endocytosis. endomembrane-type CA-ATPase 4;(source:Araport11) Ipc10G0015390 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0015400 AT3G46290.1 hercules receptor kinase 1 Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 1;(source:Araport11) Ipc10G0015410 AT2G04660.1 anaphase-promoting complex/cyclosome 2 a highly conserved ubiquitin-protein ligase involved in cell cycle regulation anaphase-promoting complex/cyclosome 2;(source:Araport11) Ipc10G0015420 AT3G46220.1 0 0 E3 UFM1-protein ligase-like protein;(source:Araport11) Ipc10G0015430 AT2G28630.2 0 Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 12;(source:Araport11) Ipc10G0015440 AT5G59730.2 exocyst subunit exo70 family protein H7 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. The mRNA is cell-to-cell mobile. exocyst subunit exo70 family protein H7;(source:Araport11) Ipc11G0004150 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0004140 AT2G18890.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc11G0004130 AT1G78690.5 0 Encodes a lysoglycerophospholipid O-acyltransferase that acylates 1-acyl lyso PE and 1-acyl lyso PG but not PE or PG. Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc11G0004120 AT5G57655.1 xylose isomerase family protein 0 xylose isomerase family protein;(source:Araport11) Ipc11G0004110 AT1G22450.1 cytochrome C oxidase 6B subunit 6b of cytochrome c oxidase cytochrome C oxidase 6B;(source:Araport11) Ipc11G0004100 AT5G12020.1 17.6 kDa class II heat shock protein 0 17.6 kDa class II heat shock protein;(source:Araport11) Ipc11G0004090 AT2G45380.4 0 0 myeloid leukemia factor;(source:Araport11) Ipc11G0004080 AT1G22430.2 GroES-like zinc-binding dehydrogenase family protein 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc11G0004070 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0004060 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc11G0004050 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0004040 AT1G78310.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc11G0004030 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc11G0004020 AT1G22410.1 Class-II DAHP synthetase family protein 0 Class-II DAHP synthetase family protein;(source:Araport11) Ipc11G0004010 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc11G0004000 AT4G33500.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc11G0003990 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc11G0003980 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0003970 AT5G64240.2 metacaspase 3 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 3;(source:Araport11) Ipc11G0003960 AT1G10570.2 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc11G0003950 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc11G0003940 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0003930 AT1G15400.2 0 0 hypothetical protein;(source:Araport11) Ipc11G0003920 AT5G41180.2 0 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc11G0003910 AT1G78240.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc11G0003900 AT5G54910.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc11G0003890 AT2G20900.3 diacylglycerol kinase 5 0 diacylglycerol kinase 5;(source:Araport11) Ipc11G0003880 AT1G58340.1 MATE efflux family protein Encodes a plant MATE (multidrug and toxic compound extrusion) transporter that is localized to the Golgi complex and small organelles and is involved in determining the rate of organ initiation. It is also involved in iron homeostasis when plants are under osmotic stress. MATE efflux family protein;(source:Araport11) Ipc11G0003870 AT1G34780.1 APR-like 4 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APR-like 4;(source:Araport11) Ipc11G0003860 AT1G34760.2 general regulatory factor 11 Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light. general regulatory factor 11;(source:Araport11) Ipc11G0003850 AT5G09430.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc11G0003840 AT1G34750.3 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc11G0003830 AT4G08920.1 cryptochrome 1 Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. The mRNA is cell-to-cell mobile. cryptochrome 1;(source:Araport11) Ipc11G0003820 AT5G39775.1 0 0 Gag-Pol polyprotein/retrotransposon;(source:Araport11) Ipc11G0003810 AT1G34670.1 myb domain protein 93 Encodes a member of the R2R3 transcription factor gene family that is a negative regulator of lateral root (LR) development. It has been proposed that this transcription factor is part of a novel negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. myb domain protein 93;(source:Araport11) Ipc11G0003800 AT3G54100.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc11G0003790 AT1G51740.1 syntaxin of plants 81 member of SYP8 Gene Family syntaxin of plants 81;(source:Araport11) Ipc11G0003780 AT2G24650.2 0 0 B3 domain-containing protein REM13;(source:Araport11) Ipc11G0003770 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc11G0003760 AT1G14800.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc11G0003750 AT1G78190.1 Trm112p-like protein 0 Trm112p-like protein;(source:Araport11) Ipc11G0003740 AT1G22260.1 Myosin heavy chain-related protein One of two nearly identical proteins (ZYP1b) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility. Myosin heavy chain-related protein;(source:Araport11) Ipc11G0003730 AT1G35830.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc11G0003720 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc11G0003710 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc11G0003700 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0003690 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc11G0003680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0003670 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0003660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0003650 #N/A #N/A #N/A #N/A Ipc11G0003640 AT3G14270.2 0 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant. phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc11G0003630 AT1G36050.2 Endoplasmic reticulum vesicle transporter protein 0 Endoplasmic reticulum vesicle transporter protein;(source:Araport11) Ipc11G0003620 AT3G12380.1 actin-related protein 5 Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family. actin-related protein 5;(source:Araport11) Ipc11G0003610 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc11G0003600 AT1G51160.3 0 TRAPP protein BET5 homolog. SNARE-like superfamily protein;(source:Araport11) Ipc11G0003590 AT1G48300.1 0 Cytosolic iron-sulfur protein with a [2Fe-2S] cluster which synthesizes triacylglycerol (DGAT activity). diacylglycerol acyltransferase;(source:Araport11) Ipc11G0003580 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0003570 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc11G0003560 AT1G77130.1 plant glycogenin-like starch initiation protein 2 Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 2;(source:Araport11) Ipc11G0003550 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc11G0003540 AT1G49560.2 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc11G0003530 AT3G18640.3 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc11G0003520 AT5G42240.1 serine carboxypeptidase-like 42 0 serine carboxypeptidase-like 42;(source:Araport11) Ipc11G0003510 AT3G09040.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0003500 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0003490 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc11G0003480 AT3G50420.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0003470 AT1G43790.1 tracheary element differentiation-related 6 0 tracheary element differentiation-related 6;(source:Araport11) Ipc11G0003460 AT5G24630.8 0 This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells. double-stranded DNA binding protein;(source:Araport11) Ipc11G0003450 AT1G18790.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc11G0003440 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc11G0003430 AT5G38490.1 Domain of unknown function (DUF313) 0 B3 domain protein (DUF313);(source:Araport11) Ipc11G0003420 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc11G0003410 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc11G0003400 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc11G0003390 AT4G01550.1 NAC domain containing protein 69 Encodes a plasma-membrane bound NAC transcription factor, whose controlled proteolytic activation allows it to enter the nucleus. NAC domain containing protein 69;(source:Araport11) Ipc11G0003380 AT3G25590.1 0 0 micronuclear linker histone polyprotein-like protein;(source:Araport11) Ipc11G0003370 AT3G25920.1 ribosomal protein L15 encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex ribosomal protein L15;(source:Araport11) Ipc11G0003360 AT1G77090.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0 thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc11G0003350 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc11G0003340 AT2G24960.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc11G0003330 AT1G21460.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc11G0003320 AT1G65260.1 plastid transcriptionally active 4 Encodes a protein required for thylakoid membrane formation. plastid transcriptionally active 4;(source:Araport11) Ipc11G0003310 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc11G0003300 AT1G43900.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc11G0003290 AT1G43890.3 RAB GTPASE HOMOLOG B18 ras-related small GTPase RAB GTPASE HOMOLOG B18;(source:Araport11) Ipc11G0003270 AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1 0 BRI1 suppressor 1 (BSU1)-like 1;(source:Araport11) Ipc11G0003280 AT3G06483.1 pyruvate dehydrogenase kinase Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily. pyruvate dehydrogenase kinase;(source:Araport11) Ipc11G0003260 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc11G0003250 AT1G77160.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc11G0003230 AT1G22020.2 0 Encodes a putative serine hydroxymethyltransferase. serine hydroxymethyltransferase 6;(source:Araport11) Ipc11G0003240 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0011500 AT1G67410.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc09G0011510 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0011530 AT1G67400.1 ELMO/CED-12 family protein 0 ELMO/CED-12 family protein;(source:Araport11) Ipc09G0011520 AT1G67400.1 ELMO/CED-12 family protein 0 ELMO/CED-12 family protein;(source:Araport11) Ipc09G0011540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028010 AT5G26340.1 Major facilitator superfamily protein Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Major facilitator superfamily protein;(source:Araport11) Ipc01G0028230 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0028240 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028250 AT3G22380.3 0 Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. Also shown to be invoved in the maintenance of Arabidopsis thaliana metabolic homeostasis. time for coffee;(source:Araport11) Ipc01G0028260 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0028270 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc01G0028280 AT4G14950.1 SNARE associated Golgi protein family KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway. SNARE associated Golgi protein family;(source:Araport11) Ipc01G0028290 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0028300 AT4G01780.1 XH/XS domain-containing protein 0 XH/XS domain-containing protein;(source:Araport11) Ipc01G0028310 AT1G35617.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028320 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc01G0028330 AT4G14920.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc01G0028340 AT4G09800.1 S18 ribosomal protein encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex S18 ribosomal protein;(source:Araport11) Ipc01G0028350 AT3G22450.2 0 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc01G0028360 AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein 0 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc01G0028370 AT4G14880.5 0 Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence. Required for pollen tube growth and/or fertilization. O-acetylserine (thiol) lyase (OAS-TL) isoform A1;(source:Araport11) Ipc01G0028380 AT4G14870.1 secE/sec61-gamma protein transport protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. The mRNA is cell-to-cell mobile. secE/sec61-gamma protein transport protein;(source:Araport11) Ipc01G0028390 AT1G05410.1 Protein of unknown function (DUF1423) 0 CDPK adapter, putative (DUF1423);(source:Araport11) Ipc01G0028400 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0028410 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0028420 AT5G16040.2 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc01G0028430 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0028440 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0028450 AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. Structural maintenance of chromosomes (SMC) family protein;(source:Araport11) Ipc01G0028460 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0028470 AT3G30200.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc01G0028480 AT2G32100.1 ovate family protein 16 0 ovate family protein 16;(source:Araport11) Ipc01G0028490 AT3G22490.1 Seed maturation protein Atrab28 plays a role in the ion cell balance during late embryogenesis and germination. Seed maturation protein;(source:Araport11) Ipc01G0028500 AT2G48130.6 0 Encodes a plasma membrane-localized glycosylphosphatidylinositol-anchored lipid transfer protein expressed in root endodermis and seed coats that is involved in very long chain fatty acid (and their derivatives) transport. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0028510 AT4G21585.5 0 Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. endonuclease 4;(source:Araport11) Ipc01G0028520 AT5G56980.1 0 0 cotton fiber protein;(source:Araport11) Ipc01G0028530 AT3G22620.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0028540 AT1G05450.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0028550 AT3G17720.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc01G0028560 AT5G59800.1 methyl-CPG-binding domain 7 Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing. methyl-CPG-binding domain 7;(source:Araport11) Ipc01G0028570 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0028580 AT1G05460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0028590 #N/A #N/A #N/A #N/A Ipc01G0028600 AT2G33450.1 Ribosomal L28 family 0 Ribosomal L28 family;(source:Araport11) Ipc01G0028610 AT4G14930.1 Survival protein SurE-like phosphatase/nucleotidase 0 Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11) Ipc01G0028620 AT1G06250.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0028630 #N/A #N/A #N/A #N/A Ipc01G0028640 AT5G49390.1 0 0 serine/threonine-protein phosphatase 4 regulatory subunit-like protein;(source:Araport11) Ipc01G0028650 AT4G02770.1 photosystem I subunit D-1 Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1) photosystem I subunit D-1;(source:Araport11) Ipc01G0028660 AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem. PLAT/LH2 domain-containing lipoxygenase family protein;(source:Araport11) Ipc01G0028670 AT1G14900.1 high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A;(source:Araport11) Ipc01G0028680 #N/A #N/A #N/A #N/A Ipc01G0028690 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028700 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028710 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0028720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028730 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0018340 AT1G77290.3 0 0 Glutathione S-transferase family protein;(source:Araport11) Ipc04G0018350 AT1G77290.3 0 0 Glutathione S-transferase family protein;(source:Araport11) Ipc04G0018330 AT1G77300.1 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development. histone-lysine N-methyltransferase;(source:Araport11) Ipc04G0018320 AT1G77300.2 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development. histone-lysine N-methyltransferase;(source:Araport11) Ipc04G0018310 AT5G20240.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain transcription factor. Required for the specification of petal and stamen identities. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc04G0018300 AT1G21600.2 plastid transcriptionally active 6 Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. plastid transcriptionally active 6;(source:Araport11) Ipc04G0018290 AT1G21610.1 wound-responsive family protein 0 wound-responsive family protein;(source:Araport11) Ipc04G0018270 AT2G41020.1 WW domain-containing protein 0 WW domain-containing protein;(source:Araport11) Ipc04G0018280 AT5G15340.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0018260 AT1G43850.2 SEUSS transcriptional co-regulator Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls. SEUSS transcriptional co-regulator;(source:Araport11) Ipc04G0018250 AT1G43850.2 SEUSS transcriptional co-regulator Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls. SEUSS transcriptional co-regulator;(source:Araport11) Ipc04G0018240 AT1G43860.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc04G0018220 AT1G21450.1 SCARECROW-like 1 Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family. The mRNA is cell-to-cell mobile. SCARECROW-like 1;(source:Araport11) Ipc04G0018230 AT5G25800.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0018210 AT1G61290.2 0 member of SYP12 Gene Family syntaxin of plants 124;(source:Araport11) Ipc04G0018200 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0018190 AT3G18710.1 plant U-box 29 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 29;(source:Araport11) Ipc04G0018180 AT5G42965.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0018160 AT5G42120.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc04G0018170 #N/A #N/A #N/A #N/A Ipc04G0018150 AT1G43770.3 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0018140 AT1G21340.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc04G0018130 AT5G06530.2 ABC-2 type transporter family protein Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility. ABC-2 type transporter family protein;(source:Araport11) Ipc04G0018120 AT3G18690.1 MAP kinase substrate 1 Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators. MAP kinase substrate 1;(source:Araport11) Ipc04G0018110 AT5G48940.1 Leucine-rich repeat transmembrane protein kinase family protein RGFR2 is a leucine-­rich repeat receptor kinase that, together with RGFR1 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc04G0018100 AT1G21350.5 0 0 Thioredoxin superfamily protein;(source:Araport11) Ipc04G0018090 AT1G77260.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0018080 AT1G77120.1 alcohol dehydrogenase 1 Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. alcohol dehydrogenase 1;(source:Araport11) Ipc04G0018070 AT1G77120.1 alcohol dehydrogenase 1 Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. alcohol dehydrogenase 1;(source:Araport11) Ipc04G0018060 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc04G0018050 AT1G21360.1 glycolipid transfer protein 2 0 glycolipid transfer protein 2;(source:Araport11) Ipc04G0018040 AT1G78780.5 0 0 pathogenesis-related family protein;(source:Araport11) Ipc04G0018030 AT1G78780.5 0 0 pathogenesis-related family protein;(source:Araport11) Ipc04G0018020 AT4G31080.1 Protein of unknown function (DUF2296) Encodes one of two LUNAPARK proteins in Arabidopsis. Both LNPA and LNPB are predominantly distributed throughout the ER, but not preferentially localized at the three-way junctions. Mutation of both LNPA and LNPB together caused the cortical ER to develop poor ER cisternae and a less dense tubular network. integral membrane metal-binding family protein (DUF2296);(source:Araport11) Ipc04G0018010 AT2G10553.1 0 0 zinc finger CCCH domain protein;(source:Araport11) Ipc04G0018000 AT1G77122.1 Uncharacterised protein family UPF0090 0 Uncharacterized protein family UPF0090;(source:Araport11) Ipc04G0017990 AT1G43800.1 Plant stearoyl-acyl-carrier-protein desaturase family protein 0 Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc04G0017980 AT1G77120.1 alcohol dehydrogenase 1 Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. alcohol dehydrogenase 1;(source:Araport11) Ipc04G0017970 AT1G77120.1 alcohol dehydrogenase 1 Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. alcohol dehydrogenase 1;(source:Araport11) Ipc04G0017960 AT2G18220.1 Noc2p family 0 Noc2p family;(source:Araport11) Ipc04G0017950 AT1G77260.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0017940 AT5G42140.2 0 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc04G0017930 AT1G43700.1 VIRE2-interacting protein 1 Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response. The mRNA is cell-to-cell mobile. VIRE2-interacting protein 1;(source:Araport11) Ipc04G0017920 AT1G76920.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0017910 AT1G21460.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc04G0017900 AT3G21470.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc04G0017890 AT1G30755.6 0 0 elongation factor G, putative (DUF668);(source:Araport11) Ipc04G0017880 AT1G21480.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc04G0017870 AT4G37480.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0017860 AT1G21310.1 extensin 3 Encodes extensin 3. extensin 3;(source:Araport11) Ipc04G0017850 AT1G43670.1 Inositol monophosphatase family protein Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus. The mRNA is cell-to-cell mobile. Inositol monophosphatase family protein;(source:Araport11) Ipc04G0017840 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0017830 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0017820 AT5G54130.3 Calcium-binding endonuclease/exonuclease/phosphatase family 0 Calcium-binding endonuclease/exonuclease/phosphatase family;(source:Araport11) Ipc04G0017810 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0017800 AT1G21200.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc04G0017790 AT1G76890.2 Duplicated homeodomain-like superfamily protein encodes a plant trihelix DNA-binding protein Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc04G0017780 AT1G43650.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc04G0017770 AT1G43650.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc04G0017760 AT4G16740.4 0 Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity. terpene synthase 03;(source:Araport11) Ipc04G0017750 AT4G16730.2 0 In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides downstream of the start codon leading to a frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present. terpene synthase 02;(source:Araport11) Ipc04G0017740 AT1G76900.3 0 Member of plant TLP family. Contains terminal F-box domain, interacts with ASK proteins. Tethered to the PM. tubby like protein 1;(source:Araport11) Ipc04G0017730 AT1G18740.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc04G0017720 AT1G76770.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc04G0017710 AT1G21090.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc04G0017700 AT5G44080.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc04G0017690 AT1G20180.2 Protein of unknown function (DUF677) 0 transmembrane protein (DUF677);(source:Araport11) Ipc04G0017680 AT1G43620.7 0 Encodes a UDP-glucose:sterol-glucosyltransferase. ugt80b1 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels, reduced seed size, and a transparent testa phenotype. The mutant seeds also have reduced levels of suberization and lipid polyester monomers. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc04G0017670 #N/A #N/A #N/A #N/A Ipc04G0017660 AT1G76760.1 thioredoxin Y1 Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma. thioredoxin Y1;(source:Araport11) Ipc04G0017650 AT5G05510.1 Mad3/BUB1 homology region 1 0 Mad3/BUB1 homology region 1;(source:Araport11) Ipc04G0017640 AT2G43160.5 0 0 ENTH/VHS family protein;(source:Araport11) Ipc04G0017630 AT2G21770.1 cellulose synthase A9 cellulose synthase, related to CESA6. cellulose synthase A9;(source:Araport11) Ipc04G0017620 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0017610 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc04G0017600 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc04G0017590 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0017580 AT4G19020.2 0 Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance. chromomethylase 2;(source:Araport11) Ipc04G0017570 AT1G69770.1 chromomethylase 3 Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3;(source:Araport11) Ipc04G0017560 AT1G48100.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0017550 AT1G43130.1 like COV 2 0 like COV 2;(source:Araport11) Ipc04G0017540 AT5G61890.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0017530 AT4G24630.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc04G0017510 AT5G42440.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0017520 AT5G42440.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0017500 AT1G16780.3 0 Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves. Inorganic H pyrophosphatase family protein;(source:Araport11) Ipc04G0017490 AT4G09890.1 Protein of unknown function (DUF3511) 0 mediator of RNA polymerase II transcription subunit, putative (DUF3511);(source:Araport11) Ipc04G0017480 AT1G34000.1 one-helix protein 2 Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions. Together with OHP1, OHP2 is essential for the formation of photosystem II reaction center, even though neither is a part of the final PSII RC. It forms a complex with OHP1 and HCF244, D1, D2, PsbI, and cytochrome b559 at an early stage of PSII de novo assembly and of PSII repair under high-light conditions. one-helix protein 2;(source:Araport11) Ipc04G0017470 AT1G22790.2 0 0 Low affinity potassium transport system protein;(source:Araport11) Ipc04G0017460 AT4G09830.1 Uncharacterised conserved protein UCP009193 0 nuclear receptor family 2 group C protein;(source:Araport11) Ipc04G0017450 AT4G09810.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc04G0017440 AT1G22770.1 gigantea protein (GI) Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression. The mRNA is cell-to-cell mobile. gigantea protein (GI);(source:Araport11) Ipc04G0017430 AT1G34060.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc04G0017420 AT4G09760.2 Protein kinase superfamily protein encodes a choline synthase whose gene expression is induced by high salt and mannitol. Protein kinase superfamily protein;(source:Araport11) Ipc04G0017410 AT4G00990.1 Transcription factor jumonji (jmjC) domain-containing protein jJumonji-domain-containing H3K9 histone demethylase. Loss of function mutants are susceptible to bacterial infection and early flowering. Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc04G0017400 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc04G0017390 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc04G0017380 AT1G71710.2 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc04G0017370 AT1G71720.1 Nucleic acid-binding proteins superfamily Encodes a chloroplast localized protein that regulates the translation of Ycf1 by binding to its mRNA. It is involved in the biogenesis of photosynthetic complexes. Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc04G0017360 AT1G34110.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0017350 AT4G09730.1 RH39 Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase. The mRNA is cell-to-cell mobile. RH39;(source:Araport11) Ipc04G0017340 AT1G71740.1 0 0 nucleolar protein;(source:Araport11) Ipc04G0017330 AT1G71730.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0017320 AT1G71750.1 Hypoxanthine-guanine phosphoribosyltransferase Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination. Hypoxanthine-guanine phosphoribosyltransferase;(source:Araport11) Ipc04G0017310 AT4G36350.1 purple acid phosphatase 25 0 purple acid phosphatase 25;(source:Araport11) Ipc04G0017300 AT4G09720.1 RAB GTPase homolog G3A 0 RAB GTPase homolog G3A;(source:Araport11) Ipc04G0017290 AT5G64810.1 WRKY DNA-binding protein 51 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 51;(source:Araport11) Ipc04G0017280 AT1G71780.1 0 0 WD repeat protein;(source:Araport11) Ipc04G0017270 AT1G22730.1 MA3 domain-containing protein 0 MA3 domain-containing protein;(source:Araport11) Ipc04G0017260 AT1G34190.1 NAC domain containing protein 17 Encodes a NAC domain transcription factor that regulates the mitochondrial retrograde response and coordinates organellar functions and stress responses. NAC domain containing protein 17;(source:Araport11) Ipc04G0017250 AT1G34190.1 NAC domain containing protein 17 Encodes a NAC domain transcription factor that regulates the mitochondrial retrograde response and coordinates organellar functions and stress responses. NAC domain containing protein 17;(source:Araport11) Ipc04G0017240 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0017230 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0017220 AT1G34190.1 NAC domain containing protein 17 Encodes a NAC domain transcription factor that regulates the mitochondrial retrograde response and coordinates organellar functions and stress responses. NAC domain containing protein 17;(source:Araport11) Ipc04G0017210 AT5G20890.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc04G0017200 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc04G0017190 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc04G0017180 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc04G0017170 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc04G0017160 AT5G09360.1 laccase 14 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 14;(source:Araport11) Ipc04G0017150 AT1G71820.1 SEC6 Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. SEC6;(source:Araport11) Ipc04G0017140 AT5G13910.1 Integrase-type DNA-binding superfamily protein Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0017130 AT2G22000.1 elicitor peptide 6 precursor 0 elicitor peptide 6 precursor;(source:Araport11) Ipc04G0017120 AT1G71830.1 somatic embryogenesis receptor-like kinase 1 Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. SERK1 interacts with and transphosphorylates EMS1 somatic embryogenesis receptor-like kinase 1;(source:Araport11) Ipc04G0017110 AT1G34220.2 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc04G0017100 AT5G64950.1 Mitochondrial transcription termination factor family protein mTERF family protein which functions in the regulation of mtDNA transcription. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc04G0017090 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc04G0017080 AT1G77930.2 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0017070 AT5G65210.7 0 Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated. bZIP transcription factor family protein;(source:Araport11) Ipc04G0017060 #N/A #N/A #N/A #N/A Ipc04G0017050 AT4G08540.1 DNA-directed RNA polymerase II protein 0 DNA-directed RNA polymerase II protein;(source:Araport11) Ipc04G0017040 AT1G36320.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0017030 AT1G36310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0017020 AT4G08550.2 0 0 electron carrier/ protein disulfide oxidoreductase;(source:Araport11) Ipc04G0017010 AT4G15975.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0017000 AT1G22060.2 0 0 sporulation-specific protein;(source:Araport11) Ipc04G0016990 AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor 0 membrane-anchored ubiquitin-fold protein 6 precursor;(source:Araport11) Ipc04G0016980 AT1G22110.3 0 0 structural constituent of ribosome;(source:Araport11) Ipc04G0016970 AT5G10080.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0016960 AT1G22140.3 0 0 zinc finger CCCH domain protein;(source:Araport11) Ipc04G0016950 AT5G10180.1 slufate transporter 2;1 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. slufate transporter 2;(source:Araport11) Ipc04G0016940 AT1G22150.4 0 sulfate transporter Sultr1;3 sulfate transporter 1;(source:Araport11) Ipc04G0016930 AT1G78010.1 tRNA modification GTPase, putative 0 tRNA modification GTPase;(source:Araport11) Ipc04G0016920 AT1G78020.1 Protein of unknown function (DUF581) FCS like zinc finger 6 is induced during energy starvation through SnRK1 signaling. Mutants accumulate more SnRK1alpha1 which results in the inhibition of seedling growth under favorable growth conditions. Increased SnRK1 activity in the mutant also results in the downregulation of TOR signaling (DOI:10.1111/tpj.13854). senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc04G0016910 AT3G12570.4 FYD 0 FYD;(source:Araport11) Ipc04G0016900 AT5G09870.1 cellulose synthase 5 Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.Mutants are defective in seed coat mucilage.Involved in the regulation of mucilage composition and/or mucilage synthesis. cellulose synthase 5;(source:Araport11) Ipc04G0016890 AT1G22180.4 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc04G0016880 #N/A #N/A #N/A #N/A Ipc04G0016870 AT4G30100.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0016860 AT1G78060.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc04G0016850 AT1G78080.1 related to AP2 4 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. The mRNA is cell-to-cell mobile. related to AP2 4;(source:Araport11) Ipc04G0016840 AT1G36050.2 Endoplasmic reticulum vesicle transporter protein 0 Endoplasmic reticulum vesicle transporter protein;(source:Araport11) Ipc04G0016830 AT1G78090.1 trehalose-6-phosphate phosphatase homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases trehalose-6-phosphate phosphatase;(source:Araport11) Ipc04G0016820 AT1G35830.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc04G0016810 AT1G78130.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0016800 AT1G35780.1 0 0 N-lysine methyltransferase;(source:Araport11) Ipc04G0016790 AT1G35720.1 annexin 1 Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, β-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants. The mRNA is cell-to-cell mobile. annexin 1;(source:Araport11) Ipc04G0016780 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0016770 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0016760 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0016750 AT5G53560.1 cytochrome B5 isoform E Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. cytochrome B5 isoform E;(source:Araport11) Ipc04G0016740 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0016730 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0016720 AT5G64200.2 ortholog of human splicing factor SC35 encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks. serine/arginine-rich splicing factor-like protein, putative;(source:Araport11) Ipc04G0016710 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0016700 AT1G78170.1 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc04G0016690 AT3G17130.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0016680 AT1G34640.1 peptidases 0 peptidase;(source:Araport11) Ipc04G0016670 AT1G68080.4 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0016660 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0016650 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0016640 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0016630 AT4G09060.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0016620 AT1G72230.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc04G0016610 AT1G35230.1 arabinogalactan protein 5 Encodes arabinogalactan-protein (AGP5). The mRNA is cell-to-cell mobile. arabinogalactan protein 5;(source:Araport11) Ipc04G0016600 AT4G09020.1 isoamylase 3 Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated. The mRNA is cell-to-cell mobile. isoamylase 3;(source:Araport11) Ipc04G0016590 AT1G35220.3 0 0 FAM91 carboxy-terminus protein;(source:Araport11) Ipc04G0016580 AT3G30820.1 Arabidopsis retrotransposon ORF-1 protein 0 retrotransposon ORF-1 protein;(source:Araport11) Ipc04G0016570 AT4G40060.1 homeobox protein 16 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 16;(source:Araport11) Ipc04G0016560 AT1G35210.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0016550 AT1G22460.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc04G0016540 AT4G09010.1 ascorbate peroxidase 4 Encodes a thylakoid lumen protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found. ascorbate peroxidase 4;(source:Araport11) Ipc04G0016530 AT5G10980.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc04G0016520 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc04G0016510 AT1G78290.3 Protein kinase superfamily protein encodes a member of SNF1-related protein kinase (SnRK2) family whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress and dehydration. Protein kinase superfamily protein;(source:Araport11) Ipc04G0016500 AT1G78280.1 transferases, transferring glycosyl groups 0 transferases, transferring glycosyl groups;(source:Araport11) Ipc04G0016490 AT1G22410.1 Class-II DAHP synthetase family protein 0 Class-II DAHP synthetase family protein;(source:Araport11) Ipc04G0016480 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0016470 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc04G0016460 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc04G0016450 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc04G0016440 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc04G0016430 AT2G46020.6 0 Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. transcription regulatory protein SNF2;(source:Araport11) Ipc04G0016420 AT4G08950.1 Phosphate-responsive 1 family protein 0 Phosphate-responsive 1 family protein;(source:Araport11) Ipc04G0016410 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc04G0016400 AT1G22380.1 UDP-glucosyl transferase 85A3 Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus. UDP-glucosyl transferase 85A3;(source:Araport11) Ipc04G0016390 AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0016380 AT1G78240.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0016370 AT4G08940.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc04G0016360 AT1G78230.1 Outer arm dynein light chain 1 protein 0 Outer arm dynein light chain 1 protein;(source:Araport11) Ipc04G0016350 AT5G48370.3 0 0 Thioesterase/thiol ester dehydrase-isomerase superfamily protein;(source:Araport11) Ipc04G0016340 AT1G22310.2 methyl-CPG-binding domain 8 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 8;(source:Araport11) Ipc04G0016330 AT1G72200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0016320 AT5G65380.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc04G0016310 #N/A #N/A #N/A #N/A Ipc04G0016300 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016290 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016280 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016270 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016260 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016250 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc04G0016240 AT1G28210.2 DNAJ heat shock family protein DnaJ homolog AtJ1 (atj) DNAJ heat shock family protein;(source:Araport11) Ipc04G0016230 AT1G12680.1 phosphoenolpyruvate carboxylase-related kinase 2 0 phosphoenolpyruvate carboxylase-related kinase 2;(source:Araport11) Ipc04G0016220 AT4G33590.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0016210 AT4G24380.1 0 0 dihydrofolate reductase;(source:Araport11) Ipc04G0016200 AT5G49980.1 auxin F-box protein 5 0 auxin F-box protein 5;(source:Araport11) Ipc04G0016190 AT1G28200.2 0 VirF-interacting protein FIP1 FH interacting protein 1;(source:Araport11) Ipc04G0016180 AT4G24660.1 homeobox protein 22 0 homeobox protein 22;(source:Araport11) Ipc04G0016170 AT1G02070.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc04G0016160 AT5G10940.2 transducin family protein / WD-40 repeat family protein ASG2 is farnesylated protein and this post-translational modification impacts its subcellular localization. It is the homolog of the human anti-obesity factor WDTC1 and is involved in the negative regulation of fatty acid biosynthesis. The non-farnesylated form displays a nucleo-cytosolic subcellular localization. The farnesylated form displays a cytosolic subcellular localization. Interaction with At4g05420 (DDB1a) was shown using BiFC approach. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc04G0016150 AT5G50010.1 sequence-specific DNA binding transcription factors;transcription regulators 0 transcription factor bHLH145;(source:Araport11) Ipc04G0016140 AT2G22490.1 Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;(source:Araport11) Ipc04G0016130 AT5G65430.1 general regulatory factor 8 member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 general regulatory factor 8;(source:Araport11) Ipc04G0016120 AT5G16650.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0016110 AT4G24610.3 0 0 pesticidal crystal cry8Ba protein;(source:Araport11) Ipc04G0016100 AT5G49710.3 0 0 RING finger protein;(source:Araport11) Ipc04G0016090 AT4G24580.2 0 Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube. Rho GTPase activation protein (RhoGAP) with PH domain-containing protein;(source:Araport11) Ipc04G0016080 AT3G27230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0016070 AT1G58120.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0016060 AT5G49700.1 Predicted AT-hook DNA-binding family protein 0 Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc04G0016050 AT4G24550.2 Clathrin adaptor complexes medium subunit family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc04G0016040 AT4G24550.3 Clathrin adaptor complexes medium subunit family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc04G0016030 AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0016020 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc04G0016010 AT5G60930.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0016000 AT4G38060.4 0 0 hypothetical protein;(source:Araport11) Ipc04G0015990 AT1G09710.4 0 Paralog of DRMY1 with unknown function. Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0015980 AT4G24520.1 P450 reductase 1 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1;(source:Araport11) Ipc04G0015970 AT4G24510.1 HXXXD-type acyl-transferase family protein Encodes a component of the fatty acid elongation machinery required for C28 to C30 fatty acid elongation. It does not require the acyltransferase catalytic site for biological function. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc04G0015960 AT5G57380.1 Fibronectin type III domain-containing protein Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Fibronectin type III domain-containing protein;(source:Araport11) Ipc04G0015950 AT4G24500.2 hydroxyproline-rich glycoprotein family protein Encodes a proline-rich protein SICKLE (SIC). Required for development and abiotic stress tolerance. Involved in microRNA biogenesis. It is involved in mRNA splicing. It is a single copy gene in Arabidopsis and likely specific to higher plants. Along with RCN1, it functions in regulating auxin transport processes in part by regulating the recycling of PIN1 and PIN2 auxin transporters. It is required for circadian clock temperature responses. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0015940 AT1G09700.2 0 Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin. dsRNA-binding domain-like superfamily protein;(source:Araport11) Ipc04G0015930 AT4G24490.2 RAB geranylgeranyl transferase alpha subunit 1 0 RAB geranylgeranyl transferase alpha subunit 1;(source:Araport11) Ipc04G0015920 AT1G58225.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0015910 AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0015900 AT4G24480.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0015890 AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0015880 AT4G24470.2 GATA-type zinc finger protein with TIFY domain ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif. GATA-type zinc finger protein with TIFY domain-containing protein;(source:Araport11) Ipc04G0015870 AT3G21175.2 ZIM-like 1 member of a novel family of plant-specific GATA-type transcription factors. ZIM-like 1;(source:Araport11) Ipc04G0015860 AT1G58250.1 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots. HYPERSENSITIVE TO PI STARVATION 4;(source:Araport11) Ipc04G0015850 AT5G63700.2 0 0 zinc ion binding / DNA binding protein;(source:Araport11) Ipc04G0015840 AT4G24460.2 CRT (chloroquine-resistance transporter)-like transporter 2 Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection. CRT (chloroquine-resistance transporter)-like transporter 2;(source:Araport11) Ipc04G0015830 AT4G24440.2 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) 0 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S);(source:Araport11) Ipc04G0015820 AT2G38465.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0015810 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc04G0015800 AT1G09920.1 TRAF-type zinc finger-related 0 TRAF-type zinc finger-like protein;(source:Araport11) Ipc04G0015790 AT1G09930.1 oligopeptide transporter 2 oligopeptide transporter oligopeptide transporter 2;(source:Araport11) Ipc04G0015780 AT5G64430.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc04G0015770 AT5G65640.1 beta HLH protein 93 bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages. beta HLH protein 93;(source:Araport11) Ipc04G0015760 AT5G65660.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0015750 AT5G65670.2 indole-3-acetic acid inducible 9 auxin (indole-3-acetic acid) induced gene The mRNA is cell-to-cell mobile. indole-3-acetic acid inducible 9;(source:Araport11) Ipc04G0015740 AT5G49665.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc04G0015730 AT1G58290.1 Glutamyl-tRNA reductase family protein Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis. Glutamyl-tRNA reductase family protein;(source:Araport11) Ipc04G0015720 AT1G27530.1 0 0 ubiquitin-fold modifier-conjugating enzyme;(source:Araport11) Ipc04G0015710 AT1G27600.2 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc04G0015700 AT4G31770.1 debranching enzyme 1 Encodes a RNA lariat debranching enzyme required for embryogenesis. debranching enzyme 1;(source:Araport11) Ipc04G0015690 AT1G58340.1 MATE efflux family protein Encodes a plant MATE (multidrug and toxic compound extrusion) transporter that is localized to the Golgi complex and small organelles and is involved in determining the rate of organ initiation. It is also involved in iron homeostasis when plants are under osmotic stress. MATE efflux family protein;(source:Araport11) Ipc04G0015680 AT1G58330.1 transcription factor-related 0 transcription factor-like protein;(source:Araport11) Ipc04G0015670 AT5G54730.1 homolog of yeast autophagy 18 (ATG18) F 0 yeast autophagy 18 F-like protein;(source:Araport11) Ipc04G0015660 AT1G09970.1 Leucine-rich receptor-like protein kinase family protein RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0015650 AT5G49660.1 Leucine-rich repeat transmembrane protein kinase family protein The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc04G0015640 AT5G49660.1 Leucine-rich repeat transmembrane protein kinase family protein The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc04G0015630 AT5G49650.1 xylulose kinase-2 Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis. xylulose kinase-2;(source:Araport11) Ipc04G0015620 AT5G49650.1 xylulose kinase-2 Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis. xylulose kinase-2;(source:Araport11) Ipc04G0015610 AT1G76870.3 0 0 transcription factor;(source:Araport11) Ipc04G0015600 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc04G0015590 AT1G32230.3 WWE protein-protein interaction domain protein family Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. The mRNA is cell-to-cell mobile. WWE protein-protein interaction domain protein family;(source:Araport11) Ipc04G0015580 AT4G08170.2 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0 Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11) Ipc04G0015570 AT1G10020.1 Protein of unknown function (DUF1005) 0 formin-like protein (DUF1005);(source:Araport11) Ipc04G0015560 AT4G33740.5 0 0 myb-like protein X;(source:Araport11) Ipc04G0015550 AT4G37810.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc04G0015540 AT1G10040.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0015530 AT1G58370.2 0 Encodes a protein with xylanase activity. glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein;(source:Araport11) Ipc04G0015520 AT4G08150.1 KNOTTED-like from Arabidopsis thaliana A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. homeobox knotted-like protein;(source:Araport11) Ipc04G0015510 AT1G10070.2 branched-chain amino acid transaminase 2 Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development. branched-chain amino acid transaminase 2;(source:Araport11) Ipc04G0015500 AT3G49690.1 myb domain protein 84 Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. myb domain protein 84;(source:Araport11) Ipc04G0015490 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc04G0015480 AT1G58520.7 0 0 GDSL-like lipase/acylhydrolase superfamily protein;(source:Araport11) Ipc04G0015470 AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc04G0015460 AT4G07960.2 0 encodes a gene similar to cellulose synthase Cellulose-synthase-like C12;(source:Araport11) Ipc04G0015450 AT1G10120.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0015440 AT4G37750.1 Integrase-type DNA-binding superfamily protein ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed in the chalaza, floral organ primordia, and lateral shoot organ primordia. Regulates growth and cell numbers during organogenesis. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0015430 AT1G44920.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0015420 AT2G22840.1 growth-regulating factor 1 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1;(source:Araport11) Ipc04G0015410 AT1G44910.1 pre-mRNA-processing protein 40A Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries. pre-mRNA-processing protein 40A;(source:Araport11) Ipc04G0015400 AT5G11380.4 0 Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. 1-deoxy-D-xylulose 5-phosphate synthase 3;(source:Araport11) Ipc04G0015390 AT3G25230.1 rotamase FKBP 1 Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. rotamase FKBP 1;(source:Araport11) Ipc04G0015380 AT4G20080.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein 0 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc04G0015370 AT3G25230.1 rotamase FKBP 1 Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. rotamase FKBP 1;(source:Araport11) Ipc04G0015360 AT1G59540.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a kinesin-like protein. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0015350 AT3G49760.1 basic leucine-zipper 5 0 basic leucine-zipper 5;(source:Araport11) Ipc04G0015340 AT1G59520.3 CW7 Encodes CW7. CW7;(source:Araport11) Ipc04G0015330 AT1G10150.1 Carbohydrate-binding protein 0 Carbohydrate-binding protein;(source:Araport11) Ipc04G0015320 AT3G49800.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc04G0015310 AT3G49810.1 ARM repeat superfamily protein Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination. ARM repeat superfamily protein;(source:Araport11) Ipc04G0015300 AT1G58420.1 Uncharacterised conserved protein UCP031279 0 Uncharacterized conserved protein UCP031279;(source:Araport11) Ipc04G0015290 AT3G25230.1 rotamase FKBP 1 Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. rotamase FKBP 1;(source:Araport11) Ipc04G0015280 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc04G0015270 AT4G07410.1 Transducin family protein / WD-40 repeat family protein Encodes a WD-40 protein expressed both during embryo development and postembryonically in the SAM and RAM that functions in the auxin pathway, integrating auxin signaling in the organization and maintenance of the SAM and RAM. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc04G0015260 AT4G33800.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0015250 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc04G0015240 AT1G59590.1 ZCF37 ZCF37 mRNA, complete cds The mRNA is cell-to-cell mobile. ZCF37;(source:Araport11) Ipc04G0015230 AT5G63905.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0015220 AT5G43190.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc04G0015210 AT3G01400.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0015200 AT4G37540.1 LOB domain-containing protein 39 0 LOB domain-containing protein 39;(source:Araport11) Ipc04G0015190 AT1G49890.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc04G0015180 AT5G43150.1 0 0 elongation factor;(source:Araport11) Ipc04G0015170 AT5G43130.1 TBP-associated factor 4 0 TBP-associated factor 4;(source:Araport11) Ipc04G0015160 AT3G50000.1 casein kinase II, alpha chain 2 Encodes the casein kinase II (CK2) catalytic subunit (alpha). casein kinase II, alpha chain 2;(source:Araport11) Ipc04G0015150 AT5G59845.1 Gibberellin-regulated family protein Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall. Gibberellin-regulated family protein;(source:Araport11) Ipc04G0015140 AT4G37320.1 cytochrome P450, family 81, subfamily D, polypeptide 5 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 5;(source:Araport11) Ipc04G0015130 AT4G37340.1 cytochrome P450, family 81, subfamily D, polypeptide 3 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 3;(source:Araport11) Ipc04G0015120 AT4G37370.1 cytochrome P450, family 81, subfamily D, polypeptide 8 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 8;(source:Araport11) Ipc04G0015110 AT4G37320.1 cytochrome P450, family 81, subfamily D, polypeptide 5 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 5;(source:Araport11) Ipc04G0015100 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0015090 AT1G47230.1 CYCLIN A3;4 0 CYCLIN A3;(source:Araport11) Ipc04G0015080 AT5G10600.1 cytochrome P450, family 81, subfamily K, polypeptide 2 member of CYP81K cytochrome P450, family 81, subfamily K, polypeptide 2;(source:Araport11) Ipc04G0015070 AT4G24210.1 F-box family protein F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins. F-box family protein;(source:Araport11) Ipc04G0015060 AT4G35280.1 C2H2-like zinc finger protein Target promoter of the male germline-specific transcription factor DUO1. C2H2-like zinc finger protein;(source:Araport11) Ipc04G0015050 AT4G37280.1 MRG family protein 0 MRG family protein;(source:Araport11) Ipc04G0015040 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc04G0015030 AT4G34215.2 Domain of unknown function (DUF303) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds. carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc04G0015020 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc04G0015010 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc04G0015000 AT3G46630.1 Protein of unknown function (DUF3223) 0 DCL protein (DUF3223);(source:Araport11) Ipc04G0014990 AT1G47056.1 VIER F-box proteine 1 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. VIER F-box protein 1;(source:Araport11) Ipc04G0014980 AT4G07390.2 0 0 Mannose-P-dolichol utilization defect 1 protein;(source:Araport11) Ipc04G0014970 AT1G60060.1 Serine/threonine-protein kinase WNK (With No Lysine)-related 0 Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11) Ipc04G0014960 AT1G47128.1 Granulin repeat cysteine protease family protein cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc04G0014950 AT4G24240.1 WRKY DNA-binding protein 7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. WRKY DNA-binding protein 7;(source:Araport11) Ipc04G0014940 AT4G06744.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0014930 AT3G29050.2 0 0 receptor-like protein kinase-like protein;(source:Araport11) Ipc04G0014920 AT5G43020.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0014910 AT5G47830.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0014900 AT5G47820.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0014890 AT4G06536.1 SPla/RYanodine receptor (SPRY) domain-containing protein 0 SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11) Ipc04G0014880 AT3G50260.1 cooperatively regulated by ethylene and jasmonate 1 Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. The mRNA is cell-to-cell mobile. cooperatively regulated by ethylene and jasmonate 1;(source:Araport11) Ipc04G0014870 AT1G46480.1 WUSCHEL related homeobox 4 Encodes WOX4, a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. This protein also contains an acidic domain approximately 10 residues upstream of the WUS box. Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth. WOX4 and WOX14 act downstream of the PXY receptor kinase to regulate plant vascular proliferation independently of any role in vascular organisation. WUSCHEL related homeobox 4;(source:Araport11) Ipc04G0014860 AT1G49760.2 poly(A) binding protein 8 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. poly(A) binding protein 8;(source:Araport11) Ipc04G0014850 AT5G42940.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0014840 AT4G02630.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0014830 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc04G0014820 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc04G0014810 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc04G0014800 AT1G45976.1 S-ribonuclease binding protein 1 0 S-ribonuclease binding protein 1;(source:Araport11) Ipc04G0014790 AT3G11290.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc04G0014780 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc04G0014770 AT1G46264.1 heat shock transcription factor B4 Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions. heat shock transcription factor B4;(source:Araport11) Ipc04G0014760 AT1G45207.3 0 0 Remorin family protein;(source:Araport11) Ipc04G0014750 AT1G48090.2 0 0 calcium-dependent lipid-binding family protein;(source:Araport11) Ipc04G0014740 AT4G01710.1 ARP2/3 complex 16 kDa subunit (p16-Arc) belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome. ARP2/3 complex 16 kDa subunit (p16-Arc);(source:Araport11) Ipc04G0014730 AT2G26570.2 0 Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity. WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827);(source:Araport11) Ipc04G0014720 AT4G33330.1 plant glycogenin-like starch initiation protein 3 Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 3;(source:Araport11) Ipc04G0014710 AT4G33350.1 Tic22-like family protein 0 Tic22-like family protein;(source:Araport11) Ipc04G0001680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001670 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001660 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc04G0001650 AT1G03220.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001640 AT1G57690.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc04G0001630 AT1G08970.4 nuclear factor Y, subunit C9 Encodes a NUCLEAR FACTOR-Y C (NF-YC) homologue NF-YC9. NF-YC3., NF-YC4 and NF-YC9 redundantly modulate GA- and ABA-mediated seed germination. nuclear factor Y, subunit C9;(source:Araport11) Ipc04G0001620 AT5G19150.2 pfkB-like carbohydrate kinase family protein AT5G19150 is a dehydratase that converts (S)-NAD(P)HX to NAD(P)H. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc04G0001610 AT5G28950.1 0 0 nuclease;(source:Araport11) Ipc04G0001600 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc04G0001590 AT3G06050.1 peroxiredoxin IIF Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions. peroxiredoxin IIF;(source:Araport11) Ipc04G0001580 AT4G14220.1 RING-H2 group F1A encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond. The mRNA is cell-to-cell mobile. RING-H2 group F1A;(source:Araport11) Ipc04G0001570 AT5G19300.1 0 0 methyltransferase C9orf114 protein;(source:Araport11) Ipc04G0001560 AT3G06010.1 Homeotic gene regulator Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. SNF2/Brahma-type chromatin-remodeling protein CHR12;(source:Araport11) Ipc04G0001550 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0001540 AT3G05990.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0001530 AT3G05980.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001520 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0001510 AT5G26230.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc04G0001500 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0001490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001480 AT3G18110.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0001470 AT5G26240.1 chloride channel D Anion channel protein family member. Involved in negative regulation of pattern triggered immunity. chloride channel D;(source:Araport11) Ipc04G0001460 AT5G26330.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc04G0001450 AT4G14950.1 SNARE associated Golgi protein family KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway. SNARE associated Golgi protein family;(source:Araport11) Ipc04G0001440 AT5G19530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0001430 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0001420 AT4G24230.5 acyl-CoA-binding domain 3 acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. Microarray data shows up-regulation of many biotic- and abiotic-stress-related genes in an ACBP3 OE-1 in comparison to wild type. acyl-CoA-binding domain 3;(source:Araport11) Ipc04G0001410 AT4G30030.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001400 AT1G05410.1 Protein of unknown function (DUF1423) 0 CDPK adapter, putative (DUF1423);(source:Araport11) Ipc04G0001390 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001370 AT2G32120.2 heat-shock protein 70T-2 0 heat-shock protein 70T-2;(source:Araport11) Ipc04G0001360 AT1G05370.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc04G0001350 AT3G45960.1 expansin-like A3 member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin-like A3;(source:Araport11) Ipc04G0001340 AT1G04150.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc15G0012400 #N/A #N/A #N/A #N/A Ipc15G0012390 AT5G47520.1 RAB GTPase homolog A5A 0 RAB GTPase homolog A5A;(source:Araport11) Ipc15G0012380 AT4G28130.1 diacylglycerol kinase 6 0 diacylglycerol kinase 6;(source:Araport11) Ipc15G0012370 AT4G16490.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0012360 AT1G30960.1 GTP-binding family protein Ortholog of ERA (E. coli RAS-like protein)-related GTPase (ERG). Mitochondrial protein that associates with 18sRNA. Heterozygous mutants segregate for embryo lethality inherited as a sporphytic maternal effect. Increased ROS in the mutant ovule suggests a heritable mitochondrial defect results in lethality. GTP-binding family protein;(source:Araport11) Ipc15G0012350 AT4G10250.1 HSP20-like chaperones superfamily protein Columbia endomembrane-localized small heat shock protein HSP20-like chaperones superfamily protein;(source:Araport11) Ipc15G0012340 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc15G0012330 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0012320 AT2G02450.2 NAC domain containing protein 35 0 NAC domain containing protein 35;(source:Araport11) Ipc15G0012310 AT5G17520.1 root cap 1 (RCP1) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. root cap 1 (RCP1);(source:Araport11) Ipc15G0012300 AT5G17520.1 root cap 1 (RCP1) Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope. root cap 1 (RCP1);(source:Araport11) Ipc15G0012290 AT4G14430.1 indole-3-butyric acid response 10 Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway. indole-3-butyric acid response 10;(source:Araport11) Ipc15G0012280 AT5G27395.1 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein 0 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein;(source:Araport11) Ipc15G0012270 AT5G36780.1 0 AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing. proton pump-interactor;(source:Araport11) Ipc15G0012260 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc15G0012250 AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation. chloroplastic NIFS-like cysteine desulfurase;(source:Araport11) Ipc15G0012240 AT3G13300.3 0 Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0012230 AT4G26930.1 myb domain protein 97 Encodes a putative transcription factor (MYB97). myb domain protein 97;(source:Araport11) Ipc15G0012220 AT2G02410.1 0 0 yacP-like NYN domain protein;(source:Araport11) Ipc15G0012210 AT1G74150.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc15G0012200 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc15G0012190 AT3G29010.3 0 0 Biotin/lipoate A/B protein ligase family;(source:Araport11) Ipc15G0012180 AT3G05390.1 0 0 S-adenosyl-L-methionine-dependent methyltransferase;(source:Araport11) Ipc15G0012170 AT5G49760.1 Leucine-rich repeat protein kinase family protein Leucine rich receptor kinase. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012160 AT5G49760.1 Leucine-rich repeat protein kinase family protein Leucine rich receptor kinase. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0012140 AT1G16690.1 Enhancer of polycomb-like transcription factor protein 0 Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc15G0012150 AT1G30470.2 SIT4 phosphatase-associated family protein 0 SIT4 phosphatase-associated family protein;(source:Araport11) Ipc15G0012130 AT5G49720.1 glycosyl hydrolase 9A1 Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. glycosyl hydrolase 9A1;(source:Araport11) Ipc15G0012120 AT2G02370.3 0 0 SNARE associated Golgi protein family;(source:Araport11) Ipc15G0012110 AT3G12850.1 COP9 signalosome complex-related / CSN complex-related 0 COP9 signalosome complex-related / CSN complex-like protein;(source:Araport11) Ipc15G0012100 AT3G50910.1 0 0 netrin receptor DCC;(source:Araport11) Ipc15G0012090 AT3G05940.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc15G0012080 AT5G26731.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0012070 AT1G74900.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0012060 AT1G44575.3 0 Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation. Chlorophyll A-B binding family protein;(source:Araport11) Ipc15G0012050 AT1G21880.2 lysm domain GPI-anchored protein 1 precursor Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. It contains a C-terminal GPI anchor signal and is an ortholog of OsLYP4 and OsLYP6. lysm domain GPI-anchored protein 1 precursor;(source:Araport11) Ipc15G0012040 AT2G22670.4 indoleacetic acid-induced protein 8 Encodes a transcriptional repressor of the auxin response that is auxin inducible and is involved in lateral root formation. The mRNA is cell-to-cell mobile. indoleacetic acid-induced protein 8;(source:Araport11) Ipc15G0012030 AT1G23340.2 Protein of Unknown Function (DUF239) 0 carboxyl-terminal proteinase, putative (DUF239);(source:Araport11) Ipc15G0012020 AT1G21810.3 0 Encodes a protein that localizes at motile vesicle-like small compartments in differentiating xylem cells that is associated with microtubule plus-ends. VETH-positive compartments are unlikely to be elements in conventional endomembrane trafficking pathways. It can associate with COG2, and together these two proteins co-localize with the EXO70A1 exocyst subunit, tethering EXO70A1 to compartments associated with cortical microtubules. filament-like protein (DUF869);(source:Araport11) Ipc15G0012010 AT5G24318.4 0 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc15G0012000 AT2G43840.2 UDP-glycosyltransferase 74 F1 UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside. UDP-glycosyltransferase 74 F1;(source:Araport11) Ipc15G0011990 AT2G43840.2 UDP-glycosyltransferase 74 F1 UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside. UDP-glycosyltransferase 74 F1;(source:Araport11) Ipc15G0011980 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0011970 AT3G18100.1 myb domain protein 4r1 Member of the R2R3 transcription factor gene family. myb domain protein 4r1;(source:Araport11) Ipc15G0011960 AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc15G0011950 AT1G18080.1 Transducin/WD40 repeat-like superfamily protein Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. It is a scaffold protein that acts downstream of and is phosphorylated by WNK8 in the glucose responsiveness and flowering pathways . Knockout mutants show insensitivity to gibberellin in GA-induced seed germination. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0011940 AT1G18080.1 Transducin/WD40 repeat-like superfamily protein Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. It is a scaffold protein that acts downstream of and is phosphorylated by WNK8 in the glucose responsiveness and flowering pathways . Knockout mutants show insensitivity to gibberellin in GA-induced seed germination. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0011930 AT1G18060.1 0 0 microbial collagenase;(source:Araport11) Ipc15G0011920 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc15G0011910 AT1G73690.1 cyclin-dependent kinase D1;1 cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. cyclin-dependent kinase D1;(source:Araport11) Ipc15G0011900 AT1G18040.1 cyclin-dependent kinase D1;3 0 cyclin-dependent kinase D1;(source:Araport11) Ipc15G0011890 AT5G52450.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc15G0011880 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc15G0011870 AT3G03420.2 0 0 Ku70-binding family protein;(source:Araport11) Ipc15G0011860 AT1G48650.2 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc15G0011850 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc15G0011840 #N/A #N/A #N/A #N/A Ipc15G0011830 AT1G73805.1 Calmodulin binding protein-like Encodes SAR Deficient 1 (SARD1), a key regulator for ICS1 (Isochorismate Synthase 1) induction and salicylic acid (SA) synthesis. Calmodulin binding protein-like protein;(source:Araport11) Ipc15G0011820 AT3G18270.1 cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model. cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene;(source:Araport11) Ipc15G0011810 AT3G18260.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc15G0011800 AT1G67050.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc15G0011790 AT1G68390.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc15G0011780 AT1G21920.2 0 MRF1 is related to SET7/9 proteins but contains an atypical SET domain. It is expressed in phloem and mutants have a weak late flowering phenotype. Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc15G0011770 AT2G14660.1 0 0 thymocyte nuclear-like protein;(source:Araport11) Ipc15G0011760 AT1G48790.1 associated molecule with the SH3 domain of STAM 1 0 associated molecule with the SH3 domain of STAM 1;(source:Araport11) Ipc15G0011750 AT1G18440.1 Peptidyl-tRNA hydrolase family protein 0 Peptidyl-tRNA hydrolase family protein;(source:Araport11) Ipc15G0011740 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc15G0011730 AT1G68630.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc15G0011720 AT1G49040.1 stomatal cytokinesis defective / SCD1 protein (SCD1) Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile. stomatal cytokinesis defective / SCD1 protein (SCD1);(source:Araport11) Ipc15G0011710 AT3G48310.1 cytochrome P450, family 71, subfamily A, polypeptide 22 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 22;(source:Araport11) Ipc15G0011700 AT1G73875.1 DNAse I-like superfamily protein Deadenylase. DNAse I-like superfamily protein;(source:Araport11) Ipc15G0011690 AT3G26880.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc15G0011680 AT3G18410.2 Complex I subunit NDUFS6 0 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6);(source:Araport11) Ipc15G0011670 AT3G02555.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0011660 AT1G67060.1 0 0 peptidase M50B-like protein;(source:Araport11) Ipc15G0011640 AT1G42540.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.3;(source:Araport11) Ipc15G0011650 AT4G05310.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc15G0011630 AT3G07300.2 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc15G0011620 AT3G02560.3 0 0 Ribosomal protein S7e family protein;(source:Araport11) Ipc15G0011610 AT1G18400.1 BR enhanced expression 1 Encodes the brassinosteroid signaling component BEE1 (BR-ENHANCED EXPRESSION 1). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BR enhanced expression 1;(source:Araport11) Ipc05G0023780 AT4G38980.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0023770 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc05G0023760 AT3G55670.1 0 0 F-box/FBD/LRR protein;(source:Araport11) Ipc05G0023750 AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc05G0023740 AT3G48010.1 cyclic nucleotide-gated channel 16 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 16;(source:Araport11) Ipc05G0023730 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0023720 AT4G34890.1 xanthine dehydrogenase 1 Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance. xanthine dehydrogenase 1;(source:Araport11) Ipc05G0023710 AT4G34760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc05G0023700 #N/A #N/A #N/A #N/A Ipc05G0023690 AT5G52030.1 TraB family protein 0 TraB family protein;(source:Araport11) Ipc05G0023680 AT5G52030.2 TraB family protein 0 TraB family protein;(source:Araport11) Ipc05G0023670 AT4G32650.3 potassium channel in Arabidopsis thaliana 3 Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium channel protein;(source:Araport11) Ipc05G0023660 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0023650 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023640 AT5G18030.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc05G0023630 AT5G18030.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc05G0023620 ATCG00330.1 chloroplast ribosomal protein S14 30S chloroplast ribosomal protein S14 chloroplast ribosomal protein S14;(source:Araport11) Ipc05G0023610 AT4G34830.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0023600 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc05G0023590 AT2G24960.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc05G0023580 AT4G34840.1 Phosphorylase superfamily protein Encodes one of the 5'-methylthioadenosine nucleosidases (AT4G38800/MTN1; AT4G34840/MTN2). Double mutant, mtn1-1mtn2-1, retains approximately 14% of the MTN enzyme activity present in the wild type and displays a pleiotropic phenotype that includes altered vasculature and impaired fertility. Phosphorylase superfamily protein;(source:Araport11) Ipc05G0023570 AT2G21190.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc05G0023560 AT4G34860.3 0 0 Plant neutral invertase family protein;(source:Araport11) Ipc05G0023550 AT5G42146.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0023540 AT2G47370.2 0 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc05G0023530 AT1G61950.1 calcium-dependent protein kinase 19 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 19;(source:Araport11) Ipc05G0023520 AT3G53350.9 0 Encodes RIP3 (ROP interactive partner 3), a microtubule-binding protein that is anchored to the plasma membrane domains and promotes local microtubule disassembly, forming as specific pattern of secondary walls in xylem vessel cells. Localized at microtubules and interacts with the plant-specific kinesin AtKinesin-13A. ROP interactive partner 4;(source:Araport11) Ipc05G0023510 AT2G21170.3 0 Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots. triosephosphate isomerase;(source:Araport11) Ipc05G0023500 AT2G40430.1 0 Encodes a homolog of yeast NOP53 that is an important regulator of cell division during organ growth. Nop53 protein;(source:Araport11) Ipc05G0023490 AT2G16600.1 rotamase CYP 3 Encodes cytosolic cyclophilin ROC3. The mRNA is cell-to-cell mobile. rotamase CYP 3;(source:Araport11) Ipc05G0023480 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0023470 AT4G38710.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc05G0023460 AT3G14620.1 cytochrome P450, family 72, subfamily A, polypeptide 8 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 8;(source:Araport11) Ipc05G0023450 AT3G14610.1 cytochrome P450, family 72, subfamily A, polypeptide 7 putative cytochrome P450 cytochrome P450, family 72, subfamily A, polypeptide 7;(source:Araport11) Ipc05G0023440 AT2G25320.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc05G0023430 AT2G21100.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc05G0023420 AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc05G0023410 AT1G65870.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc05G0023400 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0023390 AT3G16620.1 translocon outer complex protein 120 component of TOC complex, plastid protein import machinery. translocon outer complex protein 120;(source:Araport11) Ipc05G0023380 AT5G21100.1 Plant L-ascorbate oxidase 0 Plant L-ascorbate oxidase;(source:Araport11) Ipc05G0023370 AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0023360 AT5G06620.1 SET domain protein 38 0 SET domain protein 38;(source:Araport11) Ipc05G0023350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023340 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023330 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc09G0011550 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0028930 ATCG00270.1 photosystem II reaction center protein D PSII D2 protein photosystem II reaction center protein D;(source:Araport11) Ipc15G0015930 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc15G0015940 AT2G26640.1 3-ketoacyl-CoA synthase 11 Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 11;(source:Araport11) Ipc15G0015950 AT5G11350.3 0 Deadenylase. DNAse I-like superfamily protein;(source:Araport11) Ipc15G0015960 AT4G11630.1 Ribosomal protein L19 family protein 0 Ribosomal protein L19 family protein;(source:Araport11) Ipc15G0015970 AT1G52420.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0015980 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc15G0015990 AT1G21730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0016000 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc15G0016010 AT2G31830.3 0 Encodes a 5-inositol-polyphosphate phosphatase, that, in vitro, shows some activity against Ins(1,4,5)P3 and PI(3,4,5)P3, but even higher activity against PI(4,5)P2 endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc15G0016020 #N/A #N/A #N/A #N/A Ipc15G0016030 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc15G0016040 AT2G25605.1 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc15G0016050 AT5G11340.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc15G0016060 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc15G0016070 AT3G42050.1 vacuolar ATP synthase subunit H family protein 0 vacuolar ATP synthase subunit H family protein;(source:Araport11) Ipc15G0016080 AT4G31340.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc15G0016090 AT4G32590.1 2Fe-2S ferredoxin-like superfamily protein 0 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc15G0016100 AT1G04940.1 translocon at the inner envelope membrane of chloroplasts 20 Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V). translocon at the inner envelope membrane of chloroplasts 20;(source:Araport11) Ipc15G0016110 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc15G0016120 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc15G0016130 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0016140 AT3G53270.9 0 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein;(source:Araport11) Ipc15G0016150 AT5G11300.1 mitotic-like cyclin 3B from Arabidopsis mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ). mitotic-like cyclin 3B from Arabidopsi;(source:Araport11) Ipc15G0016160 AT2G25570.3 binding 0 binding protein;(source:Araport11) Ipc15G0016170 AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein 0 Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc15G0016180 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0016190 AT5G25520.2 SPOC domain / Transcription elongation factor S-II protein 0 SPOC domain / Transcription elongation factor S-II protein;(source:Araport11) Ipc15G0016200 AT5G25530.2 0 0 DNAJ heat shock family protein;(source:Araport11) Ipc15G0016210 AT5G11440.2 0 Interacts with PAB (poly A binding protein) in yeast two hybrid experiments. Contains PAM2 motif, a PABC interacting domain. CTC-interacting domain 5;(source:Araport11) Ipc15G0016220 AT2G25670.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0016230 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) IpcGene28071 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) IpcGene28075 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000490 AT3G25920.1 ribosomal protein L15 encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex ribosomal protein L15;(source:Araport11) Ipc14G0000500 AT4G16563.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0000510 AT4G14190.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0000520 AT5G44670.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc14G0000530 AT2G45140.1 plant VAP homolog 12 Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. The mRNA is cell-to-cell mobile. plant VAP homolog 12;(source:Araport11) Ipc14G0000540 AT4G25200.1 mitochondrion-localized small heat shock protein 23.6 AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial mitochondrion-localized small heat shock protein 23.6;(source:Araport11) Ipc14G0000550 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc14G0000560 AT5G15140.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc14G0000570 AT5G47600.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc14G0000580 AT3G14230.1 related to AP2 2 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. related to AP2 2;(source:Araport11) Ipc09G0008670 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc09G0008680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008690 AT3G59390.2 0 0 glycosyltransferase family protein;(source:Araport11) Ipc09G0008700 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0008710 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008730 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0008740 AT2G31510.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc09G0008750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0008760 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc07G0001030 AT5G08230.1 Tudor/PWWP/MBT domain-containing protein HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions. tudor/PWWP/MBT domain protein;(source:Araport11) Ipc07G0001160 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc07G0001180 AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein 0 Beta-1,3-N-Acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0001170 AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein 0 Beta-1,3-N-Acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0001190 AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein 0 Beta-1,3-N-Acetylglucosaminyltransferase family protein;(source:Araport11) Ipc07G0001200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001210 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0001220 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0000440 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) Ipc07G0000430 AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein 0 tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11) Ipc14G0019670 AT5G64170.3 0 LNK1 is a member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex.Functions as a transcriptional coactivator. dentin sialophosphoprotein-like protein;(source:Araport11) Ipc07G0000410 #N/A #N/A #N/A #N/A Ipc07G0000390 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc13G0018050 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc13G0018030 AT2G35620.4 0 Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.Mucilage is easily detached from fei2 mutants seeds, and forms a capsule that is >50% smaller relative to wild-type. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0018630 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc14G0018660 AT5G37190.3 0 COP1-interacting protein 4, a nuclear-localized positive regulator of arabidopsis photomorphogenesis COP1-interacting protein 4;(source:Araport11) Ipc14G0018670 AT1G62830.1 LSD1-like 1 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1;(source:Araport11) Ipc14G0018700 ATMG00110.1 cytochrome C biogenesis 206 Encodes a mitochondria-encoded cytochrome c biogenesis protein. cytochrome C biogenesis 206;(source:Araport11) Ipc07G0000360 ATMG00160.1 cytochrome oxidase 2 cytochrome c oxidase subunit 2 cytochrome oxidase 2;(source:Araport11) Ipc14G0018550 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) Ipc07G0000420 AT1G61310.1 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc07G0000340 #N/A #N/A #N/A #N/A Ipc07G0000320 AT2G07689.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0 NADH-Ubiquinone/plastoquinone (complex I) protein;(source:Araport11) Ipc11G0002330 AT2G46505.1 succinate dehydrogenase subunit 4 Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion. succinate dehydrogenase subunit 4;(source:Araport11) Ipc11G0002290 AT4G08450.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc07G0000400 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc07G0000380 AT4G37340.1 cytochrome P450, family 81, subfamily D, polypeptide 3 member of CYP81D cytochrome P450, family 81, subfamily D, polypeptide 3;(source:Araport11) Ipc13G0018060 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc14G0018640 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc14G0018650 AT2G07820.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0018680 AT1G62830.1 LSD1-like 1 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1;(source:Araport11) Ipc14G0018710 ATMG00110.1 cytochrome C biogenesis 206 Encodes a mitochondria-encoded cytochrome c biogenesis protein. cytochrome C biogenesis 206;(source:Araport11) Ipc07G0000370 ATMG00160.1 cytochrome oxidase 2 cytochrome c oxidase subunit 2 cytochrome oxidase 2;(source:Araport11) Ipc14G0018560 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) Ipc14G0019650 AT1G06950.1 translocon at the inner envelope membrane of chloroplasts 110 Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis. C-terminal half of Tic110 functions as scaffolds for protein-protein interactions. translocon at the inner envelope membrane of chloroplasts 110;(source:Araport11) Ipc07G0000350 #N/A #N/A #N/A #N/A Ipc07G0000330 AT2G07689.1 NADH-Ubiquinone/plastoquinone (complex I) protein 0 NADH-Ubiquinone/plastoquinone (complex I) protein;(source:Araport11) Ipc11G0002300 AT4G08450.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc11G0002340 AT2G46505.1 succinate dehydrogenase subunit 4 Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion. succinate dehydrogenase subunit 4;(source:Araport11) Ipc14G0019770 AT5G47320.1 ribosomal protein S19 Nuclear encoded mitochondrial ribosome subunit. The mRNA is cell-to-cell mobile. ribosomal protein S19;(source:Araport11) Ipc14G0015930 AT5G45620.1 Proteasome component (PCI) domain protein 0 Proteasome component (PCI) domain protein;(source:Araport11) Ipc14G0015940 AT1G31940.1 0 0 cystic fibrosis transmembrane conductance regulator;(source:Araport11) Ipc14G0015950 AT1G32050.1 SCAMP family protein 0 SCAMP family protein;(source:Araport11) Ipc14G0015960 AT1G32080.1 membrane protein, putative Encodes a plant LrgAB/CidAB protein localized to the chloroplast envelope that is involved in chloroplast development, carbon partitioning, ABA/drought response, and leaf senescence. The gene may have evolved from gene fusion of bacterial lrgA and lrgB. membrane protein;(source:Araport11) Ipc14G0015970 AT4G19010.1 AMP-dependent synthetase and ligase family protein Encodes for a 4-coumarate-CoA ligase involved in the biosynthesis of the benzenoid ring of ubiquinone from phenylalanine. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc14G0015980 AT1G32090.1 early-responsive to dehydration stress protein (ERD4) 0 early-responsive to dehydration stress protein (ERD4);(source:Araport11) Ipc14G0015990 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc14G0016000 AT5G45590.1 Ribosomal protein L35 0 Ribosomal protein L35;(source:Araport11) Ipc14G0016010 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0016020 AT1G15750.4 Transducin family protein / WD-40 repeat family protein Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc14G0016030 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0016040 AT3G03140.1 Tudor/PWWP/MBT superfamily protein Encodes a chromatin-associated protein that interacts with plant nuclear lamin-like components to regulate nuclear size. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc14G0016050 AT2G22410.1 SLOW GROWTH 1 0 SLOW GROWTH 1;(source:Araport11) Ipc14G0016060 AT4G19020.2 0 Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance. chromomethylase 2;(source:Araport11) Ipc14G0016070 AT2G23910.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc14G0016080 AT5G52980.1 0 0 ER-based factor for assembly of V-ATPase;(source:Araport11) Ipc14G0016090 AT5G51195.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc14G0016100 AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0016110 AT4G25960.1 P-glycoprotein 2 0 P-glycoprotein 2;(source:Araport11) Ipc14G0016120 AT3G02940.2 0 Encodes a putative transcription factor (MYB107). myb domain protein 107;(source:Araport11) Ipc14G0016130 AT4G17790.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc14G0016140 AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs 0 PCNA domain-containing protein;(source:Araport11) Ipc14G0016150 AT5G46860.1 Syntaxin/t-SNARE family protein Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Syntaxin/t-SNARE family protein;(source:Araport11) Ipc14G0016160 AT5G01100.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc14G0016170 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0016180 AT2G35470.1 0 0 ribosome maturation factor;(source:Araport11) Ipc14G0016190 AT1G32250.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc14G0016200 AT2G35490.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc14G0016210 AT3G54320.3 Integrase-type DNA-binding superfamily protein WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0016220 AT1G09230.2 0 Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0016230 AT3G56670.1 0 0 F-box/associated interaction domain protein;(source:Araport11) Ipc14G0016240 AT1G32240.1 Homeodomain-like superfamily protein Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis. Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0016250 AT4G17920.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0016260 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc14G0016270 AT2G38050.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11) Ipc14G0016280 AT4G17910.4 0 0 transferases, transferring acyl groups;(source:Araport11) Ipc14G0016290 AT1G22490.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0016310 #N/A #N/A #N/A #N/A Ipc14G0016300 #N/A #N/A #N/A #N/A Ipc14G0016320 AT3G03550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0007610 AT2G05940.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1. Protein kinase superfamily protein;(source:Araport11) Ipc02G0007620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0007630 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0007640 AT3G47730.1 ATP-binding cassette A2 member of ATH subfamily ATP-binding cassette A2;(source:Araport11) Ipc02G0007650 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0007660 AT5G39890.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc02G0007670 AT3G23300.2 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0007680 AT5G49970.2 pyridoxin (pyrodoxamine) 5'-phosphate oxidase encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX. pyridoxin (pyrodoxamine) 5-phosphate oxidase;(source:Araport11) Ipc02G0007690 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007700 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc02G0007710 AT2G46550.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0007720 AT4G00690.1 UB-like protease 1B 0 UB-like protease 1B;(source:Araport11) Ipc02G0007730 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0007740 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0007750 AT2G46570.2 0 putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis). laccase 6;(source:Araport11) Ipc02G0007760 AT3G54650.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc02G0007770 AT1G74730.1 Protein of unknown function (DUF1118) Encodes a grana core localized protein, is homologous to RIG1. Mutant plants have reduced NPQ, affected organization of light-havesting complex II and an enhanced grana stacking. transmembrane protein, putative (DUF1118);(source:Araport11) Ipc02G0007780 AT3G13100.2 0 member of MRP subfamily multidrug resistance-associated protein 7;(source:Araport11) Ipc02G0007790 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc02G0007800 AT1G14420.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc02G0007810 AT1G27752.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc02G0007820 AT3G25760.1 allene oxide cyclase 1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. The mRNA is cell-to-cell mobile. allene oxide cyclase 1;(source:Araport11) Ipc02G0007830 AT3G25760.1 allene oxide cyclase 1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. The mRNA is cell-to-cell mobile. allene oxide cyclase 1;(source:Araport11) Ipc07G0000650 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0000450 AT1G01960.1 SEC7-like guanine nucleotide exchange family protein Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. SEC7-like guanine nucleotide exchange family protein;(source:Araport11) Ipc06G0000460 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000470 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc06G0000480 AT4G33970.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc06G0000490 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000500 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000510 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc06G0000540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0000550 AT1G48490.4 0 Protein kinase which together with IREH1 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc06G0000560 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc06G0000570 AT4G36740.2 0 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 40;(source:Araport11) Ipc06G0000580 AT1G08465.1 Plant-specific transcription factor YABBY family protein Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc06G0000590 AT3G20880.1 WIP domain protein 4 WIP4 is a paralog of NTT and along with WIP5,acts redundantly in cell fate determination during primary root development. MP binds to AuxRE motifs within the WIP4 gene and likely regulates its expression. WIP domain protein 4;(source:Araport11) Ipc06G0000600 AT3G12810.2 0 Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc06G0000610 AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0000620 AT1G08470.1 strictosidine synthase-like 3 Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. strictosidine synthase-like 3;(source:Araport11) Ipc06G0000630 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000640 AT3G11690.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000650 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000660 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000670 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000680 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000690 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000700 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc06G0000710 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0000720 AT4G13770.1 cytochrome P450, family 83, subfamily A, polypeptide 1 Encodes a cytochrome p450 enzyme that catalyzes the initial conversion of aldoximes to thiohydroximates in the synthesis of glucosinolates not derived from tryptophan. Also has a role in auxin homeostasis. cytochrome P450, family 83, subfamily A, polypeptide 1;(source:Araport11) Ipc06G0000730 AT1G76650.3 calmodulin-like 38 0 calmodulin-like 38;(source:Araport11) Ipc06G0000740 AT3G44050.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0017570 AT1G03687.2 DTW domain-containing protein 0 DTW domain-containing protein;(source:Araport11) Ipc13G0017550 AT5G57480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0017560 AT3G28600.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0017540 AT5G57320.2 0 0 actin filament bundling protein P-115-ABP protein;(source:Araport11) Ipc13G0017000 AT3G03600.1 ribosomal protein S2 Structural component of the mitochondrial ribosome small subunit ribosomal protein S2;(source:Araport11) Ipc13G0017530 AT3G58730.1 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 0 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD);(source:Araport11) Ipc13G0017520 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0017510 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017040 AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0017500 AT2G44280.4 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0017490 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc13G0017480 AT2G41590.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc13G0017470 AT5G64820.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0017460 AT1G55360.1 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase (DUF239);(source:Araport11) Ipc13G0017450 AT5G14980.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0017440 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc13G0017430 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017420 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0017400 AT1G76040.4 0 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29;(source:Araport11) Ipc13G0017390 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017380 AT3G25760.1 allene oxide cyclase 1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. The mRNA is cell-to-cell mobile. allene oxide cyclase 1;(source:Araport11) Ipc13G0017370 AT5G46570.1 BR-signaling kinase 2 Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. BR-signaling kinase 2;(source:Araport11) Ipc13G0017360 AT5G46570.1 BR-signaling kinase 2 Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. BR-signaling kinase 2;(source:Araport11) Ipc13G0017350 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0017340 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0017330 #N/A #N/A #N/A #N/A Ipc13G0017320 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) IpcGene28395 AT2G33540.1 C-terminal domain phosphatase-like 3 0 C-terminal domain phosphatase-like 3;(source:Araport11) IpcGene28396 AT5G23690.1 Polynucleotide adenylyltransferase family protein 0 Polynucleotide adenylyltransferase family protein;(source:Araport11) IpcGene28397 AT3G48800.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) IpcGene28398 AT5G13250.1 RING finger protein 0 RING finger protein;(source:Araport11) IpcGene28400 AT5G13230.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) IpcGene28401 AT5G13220.1 jasmonate-zim-domain protein 10 Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa. jasmonate-zim-domain protein 10;(source:Araport11) IpcGene28402 AT4G17895.1 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20;(source:Araport11) IpcGene28403 AT2G33520.1 0 0 cysteine-rich/transmembrane domain protein A;(source:Araport11) Ipc14G0010450 AT2G33500.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc14G0010460 AT4G26415.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0010470 AT1G34210.2 0 Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production.The mRNA is cell-to-cell mobile. somatic embryogenesis receptor-like kinase 2;(source:Araport11) Ipc14G0010480 AT5G21090.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc14G0010490 AT2G33490.2 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0010500 AT1G27435.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0010510 AT5G13180.1 NAC domain containing protein 83 Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation. NAC domain containing protein 83;(source:Araport11) Ipc14G0010520 AT3G02040.1 senescence-related gene 3 Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation. The mRNA is cell-to-cell mobile. senescence-related gene 3;(source:Araport11) Ipc14G0010530 AT5G43280.1 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination. delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1;(source:Araport11) Ipc14G0010540 AT5G50790.1 Nodulin MtN3 family protein Encodes a member of the SWEET sucrose efflux transporter family proteins. Nodulin MtN3 family protein;(source:Araport11) Ipc14G0010550 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc14G0010560 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc14G0010570 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0010580 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0010590 AT5G13160.1 Protein kinase superfamily protein Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. Protein kinase superfamily protein;(source:Araport11) Ipc14G0010600 AT5G13150.1 exocyst subunit exo70 family protein C1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. This particular member is expressed in pollen and, together with EXO70C2, is involved in pollen tube elongation. Found in the cytoplasm and surprisingly, not found in the plasma membrane. exocyst subunit exo70 family protein C1;(source:Araport11) Ipc14G0010610 AT5G50760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc14G0010620 AT1G27430.1 GYF domain-containing protein 0 GYF domain-containing protein;(source:Araport11) Ipc14G0010630 AT1G27430.1 GYF domain-containing protein 0 GYF domain-containing protein;(source:Araport11) Ipc14G0010640 AT5G13120.2 cyclophilin 20-2 Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone. cyclophilin 20-2;(source:Araport11) Ipc14G0010650 AT1G69040.2 ACT domain repeat 4 ACT-domain containing protein involved in feedback regulation of amino acid metabolism ACT domain repeat 4;(source:Araport11) Ipc14G0010660 AT5G13100.1 0 0 Gap junction beta-4 protein;(source:Araport11) Ipc14G0010670 AT5G50740.5 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc14G0010680 AT1G27990.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0010690 AT5G13080.1 WRKY DNA-binding protein 75 WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation. WRKY DNA-binding protein 75;(source:Araport11) Ipc14G0010700 AT1G24265.2 Protein of unknown function (DUF1664) 0 bZIP transcription factor, putative (DUF1664);(source:Araport11) Ipc14G0010710 AT5G50670.2 0 0 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc14G0010720 AT1G24260.1 K-box region and MADS-box transcription factor family protein Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc14G0010730 AT1G27290.2 0 0 transmembrane protein;(source:Araport11) Ipc14G0010740 #N/A #N/A #N/A #N/A Ipc14G0010750 AT3G48660.1 Protein of unknown function (DUF 3339) 0 transmembrane protein, putative (DUF 3339);(source:Araport11) Ipc14G0010760 AT1G67310.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains 0 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain;(source:Araport11) Ipc04G0006070 AT3G07255.1 0 0 nuclear transport factor 2/RNA recognition motif protein;(source:Araport11) Ipc04G0006060 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0006050 #N/A #N/A #N/A #N/A Ipc04G0006030 AT3G47610.1 transcription regulators;zinc ion binding 0 transcription regulator/ zinc ion binding protein;(source:Araport11) Ipc04G0006040 AT3G47610.1 transcription regulators;zinc ion binding 0 transcription regulator/ zinc ion binding protein;(source:Araport11) Ipc04G0006020 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc04G0006010 AT1G30220.1 inositol transporter 2 Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors. inositol transporter 2;(source:Araport11) Ipc04G0006000 AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein 0 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein;(source:Araport11) Ipc04G0005990 AT1G30260.1 0 0 galactosyltransferase family protein;(source:Araport11) Ipc04G0005980 AT1G30270.1 CBL-interacting protein kinase 23 Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 23;(source:Araport11) Ipc04G0005970 AT2G34620.1 Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family member. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc04G0005960 AT4G21060.2 Galactosyltransferase family protein Encodes an endomembrane system-localized, hydroxyproline-O-galactosyltransferase specific for arabinogalactan-protein biosynthesis. Galactosyltransferase family protein;(source:Araport11) Ipc04G0005950 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0005940 AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes an aromatic aldehyde synthase (AtAAS), which catalyzes the in vitro conversion of phenylalanine and 3,4-dihydroxy-L-phenylalanine to phenylacetaldehyde and dopaldehyde, respectively. The mRNA is cell-to-cell mobile. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc04G0005930 AT3G46000.3 0 Encodes depolymerizing factor 2. actin depolymerizing factor 2;(source:Araport11) Ipc04G0005920 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0005910 AT2G20340.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes an aromatic aldehyde synthase (AtAAS), which catalyzes the in vitro conversion of phenylalanine and 3,4-dihydroxy-L-phenylalanine to phenylacetaldehyde and dopaldehyde, respectively. The mRNA is cell-to-cell mobile. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc04G0005900 AT5G19480.4 0 0 mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc04G0005890 AT4G03620.2 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc04G0005880 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0005870 AT4G05475.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc04G0005860 AT4G10230.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc04G0005850 AT4G05430.3 0 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc04G0005840 AT1G30380.1 photosystem I subunit K Encodes subunit K of photosystem I reaction center. The mRNA is cell-to-cell mobile. photosystem I subunit K;(source:Araport11) Ipc04G0005820 AT5G52390.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc04G0005830 AT5G52390.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc04G0005810 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc04G0005800 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0005790 AT4G05420.1 damaged DNA binding protein 1A Structurally similar to damaged DNA binding proteins. DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis. DDB1a is shown to be RUB-modified. damaged DNA binding protein 1A;(source:Araport11) Ipc04G0005780 AT2G34660.2 multidrug resistance-associated protein 2 encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. The mRNA is cell-to-cell mobile. multidrug resistance-associated protein 2;(source:Araport11) Ipc04G0005770 AT2G34670.2 Protein of unknown function (DUF630 and DUF632) 0 benzoyl-CoA reductase subunit C, putative (DUF630 and DUF632);(source:Araport11) Ipc04G0005760 AT4G05410.1 Transducin/WD40 repeat-like superfamily protein Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0005750 AT3G59350.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0005740 AT4G29050.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc04G0005730 AT2G16990.5 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0005720 AT1G32420.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc04G0005710 AT1G77210.2 sugar transporter 14 AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose. sugar transporter 14;(source:Araport11) Ipc04G0005700 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc04G0005690 AT2G31900.4 0 Encodes an novel myosin isoform. myosin-like protein XIF;(source:Araport11) Ipc04G0005680 AT5G05390.1 laccase 12 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 12;(source:Araport11) Ipc04G0005670 AT5G19650.1 ovate family protein 8 0 ovate family protein 8;(source:Araport11) Ipc04G0005660 AT5G19540.2 0 DY1 is a novel nuclear encoded protein that is imported into the chloroplast stroma. Mutants have reduced pigmentation and somewhat abnormal thylakoid membranes. thermosome subunit gamma;(source:Araport11) Ipc04G0005650 AT3G24550.1 proline extensin-like receptor kinase 1 Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). The mRNA is cell-to-cell mobile. proline extensin-like receptor kinase 1;(source:Araport11) Ipc04G0005640 AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc04G0005630 AT3G24590.1 plastidic type i signal peptidase 1 Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33). Involved in the maturation of PsbO, plastocyanin and FtsH2/8. The mRNA is cell-to-cell mobile. plastidic type i signal peptidase 1;(source:Araport11) Ipc04G0005620 AT3G24630.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0005610 AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0005600 AT3G24620.1 RHO guanyl-nucleotide exchange factor 8 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 8;(source:Araport11) Ipc04G0005590 AT4G29010.1 Enoyl-CoA hydratase/isomerase family Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. Enoyl-CoA hydratase/isomerase family;(source:Araport11) Ipc04G0005580 AT4G29000.1 Tesmin/TSO1-like CXC domain-containing protein 0 Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11) Ipc04G0005570 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc04G0005560 AT2G16880.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0005550 AT1G23780.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0005540 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005530 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005520 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0005510 AT5G35560.1 DENN (AEX-3) domain-containing protein 0 DENN (AEX-3) domain-containing protein;(source:Araport11) Ipc04G0005490 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005500 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005480 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005470 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005460 AT1G23780.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0005450 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005440 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005430 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005420 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0005410 AT2G45360.1 Protein of unknown function (DUF1442) 0 ankyrin repeat/KH domain protein (DUF1442);(source:Araport11) Ipc04G0005400 AT2G26890.1 DNAJ heat shock N-terminal domain-containing protein GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc04G0005390 AT4G09560.1 Protease-associated (PA) RING/U-box zinc finger family protein 0 Protease-associated (PA) RING/U-box zinc finger family protein;(source:Araport11) Ipc04G0005380 AT1G08510.1 fatty acyl-ACP thioesterases B Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer. fatty acyl-ACP thioesterases B;(source:Araport11) Ipc04G0005370 AT3G43940.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0005360 AT4G17486.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc04G0005350 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc04G0005340 AT5G19780.1 tubulin alpha-5 Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication. The mRNA is cell-to-cell mobile. tubulin alpha-5;(source:Araport11) Ipc04G0005330 AT5G18100.1 copper/zinc superoxide dismutase 3 A putative peroxisomal CuZnSOD inducible by a high-light pulse. copper/zinc superoxide dismutase 3;(source:Araport11) Ipc04G0005320 AT5G18110.1 novel cap-binding protein 0 Putative cap-binding protein;(source:Araport11) Ipc04G0005310 AT5G18130.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0005300 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0005290 AT5G18140.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0005280 AT2G46080.1 0 Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal. BPS1-like protein;(source:Araport11) Ipc04G0005270 AT5G18170.1 glutamate dehydrogenase 1 Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 1;(source:Araport11) Ipc04G0005260 AT5G06590.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0005250 AT5G06560.1 Protein of unknown function, DUF593 0 myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc04G0005240 AT5G06530.2 ABC-2 type transporter family protein Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility. ABC-2 type transporter family protein;(source:Araport11) Ipc04G0005230 AT1G70540.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc04G0005220 AT3G11690.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0005210 AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor 0 FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11) Ipc04G0005200 AT2G35880.3 0 0 TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc04G0005190 AT1G79330.1 metacaspase 5 Metacaspase AtMCPb2/AMC6. Caspase family protein. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a–f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. metacaspase 5;(source:Araport11) Ipc04G0005180 AT3G10660.2 0 predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2;(source:Araport11) Ipc04G0005170 #N/A #N/A #N/A #N/A Ipc04G0005160 AT5G06440.3 0 0 polyketide cyclase/dehydrase/lipid transport superfamily protein;(source:Araport11) Ipc04G0005150 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0005140 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc04G0005130 AT5G22030.1 ubiquitin-specific protease 8 0 ubiquitin-specific protease 8;(source:Araport11) Ipc04G0005120 AT3G11760.1 0 0 structural maintenance of chromosomes flexible hinge domain protein;(source:Araport11) Ipc04G0005110 AT3G07400.1 lipase class 3 family protein 0 lipase class 3 family protein;(source:Araport11) Ipc04G0005100 AT3G44150.1 0 0 Expp1 protein;(source:Araport11) Ipc04G0005090 AT4G39530.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0005080 AT3G52380.1 chloroplast RNA-binding protein 33 Encodes a chloroplast RNA-binding protein that stabilizes chloroplast RNAs as evidenced by analyses of transcript accumulation in null mutants. Essential for seedling development (albino, strongly retarded growth even on sucrose-containing medium). chloroplast RNA-binding protein 33;(source:Araport11) Ipc04G0005070 AT3G52440.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc04G0005060 AT2G35930.1 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23;(source:Araport11) Ipc04G0005050 AT3G01640.2 0 AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G;(source:Araport11) Ipc04G0005040 AT3G24620.1 RHO guanyl-nucleotide exchange factor 8 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 8;(source:Araport11) Ipc04G0005030 AT3G11680.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc04G0005020 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc04G0005010 AT2G01820.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0005000 AT5G06350.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0004990 AT4G31400.1 damaged DNA binding;DNA-directed DNA polymerases Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development. Inactivation of CTF7 results in severe defects in reproduction and vegetative growth. protein CTF7;(source:Araport11) Ipc04G0004980 #N/A #N/A #N/A #N/A Ipc04G0004960 AT3G11650.1 NDR1/HIN1-like 2 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast NDR1/HIN1-like 2;(source:Araport11) Ipc04G0004970 AT1G14630.2 0 0 XRI1-like protein;(source:Araport11) Ipc04G0004950 AT5G13520.1 peptidase M1 family protein 0 peptidase M1 family protein;(source:Araport11) Ipc04G0004940 AT3G28430.1 0 Encodes a peripheral membrane protein localized at the Golgi apparatus that is involved in membrane trafficking, vacuole development and in flavonoid accumulation in the seed coat. Mutant seed color is pale brown. CLEC16A-like protein;(source:Araport11) Ipc04G0004930 AT2G36010.1 E2F transcription factor 3 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. E2F transcription factor 3;(source:Araport11) Ipc04G0004920 AT5G15000.1 0 Encodes a ECA1 gametogenesis related family protein ECA1 gametogenesis family protein;(source:Araport11) Ipc04G0004910 #N/A #N/A #N/A #N/A Ipc04G0004900 AT3G52520.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0017240 AT3G48720.1 HXXXD-type acyl-transferase family protein Encodes a hydroxycinnamoyl-CoA: v-hydroxy fatty acid transferase involved in cutin synthesis. Mutants are almost devoid of ferulic acid. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0017250 AT5G09870.1 cellulose synthase 5 Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.Mutants are defective in seed coat mucilage.Involved in the regulation of mucilage composition and/or mucilage synthesis. cellulose synthase 5;(source:Araport11) Ipc07G0017260 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0017270 AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein involved in mitochondrial RNA editing. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0017280 AT5G20840.1 Phosphoinositide phosphatase family protein 0 Phosphoinositide phosphatase family protein;(source:Araport11) Ipc07G0017290 AT3G05100.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0017300 AT1G54570.1 Esterase/lipase/thioesterase family protein Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence. Esterase/lipase/thioesterase family protein;(source:Araport11) Ipc07G0017310 AT5G41220.2 0 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 3;(source:Araport11) Ipc07G0017320 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc07G0017330 AT5G27970.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc07G0017340 AT2G08986.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0017350 AT1G19160.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0017360 AT5G62180.1 carboxyesterase 20 0 carboxyesterase 20;(source:Araport11) Ipc07G0017370 AT5G62180.1 carboxyesterase 20 0 carboxyesterase 20;(source:Araport11) Ipc07G0017380 AT5G62180.1 carboxyesterase 20 0 carboxyesterase 20;(source:Araport11) Ipc07G0017390 #N/A #N/A #N/A #N/A Ipc07G0017400 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc07G0017410 AT3G60470.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc07G0017420 AT3G50140.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc07G0017430 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0017440 AT1G54610.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0017450 AT1G20920.7 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0017460 AT3G05030.4 0 Encodes a vacuolar K+/H+ exchanger essential for active K+ uptake at the tonoplast and involved in regulating stomatal closure. sodium hydrogen exchanger 2;(source:Araport11) Ipc07G0017470 AT1G57790.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0017480 #N/A #N/A #N/A #N/A Ipc13G0015690 AT1G80410.2 tetratricopeptide repeat (TPR)-containing protein Encodes the catalytic subunit of a N-terminal acetyltransferase. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc07G0017490 AT3G23340.1 casein kinase I-like 10 Member of CKL gene family (CKL-C group). casein kinase I-like 10;(source:Araport11) Ipc07G0017500 AT1G08820.5 0 Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. vamp/synaptobrevin-associated protein 27-2;(source:Araport11) Ipc07G0017510 AT4G08630.2 0 0 fas-binding factor-like protein;(source:Araport11) Ipc07G0017520 AT1G52140.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc07G0017530 AT3G05200.1 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc07G0017540 AT5G13650.2 elongation factor family protein Encodes SVR3, a putative chloroplast TypA translation elongation GTPase. Loss of SVR3 suppresses variegation mediated by var2. SVR3 is essential for plants’ ability to develop functional chloroplasts under chilling stress (8C), but not at normal temperature (22C). elongation factor family protein;(source:Araport11) Ipc07G0017550 AT3G01610.2 0 AAA-type ATPase - Over 90% homologous to CDC48a cell division cycle 48C;(source:Araport11) Ipc07G0017560 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0017570 AT1G54820.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0017580 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0017590 AT3G06140.1 RING/U-box superfamily protein Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export. RING/U-box superfamily protein;(source:Araport11) Ipc07G0017600 AT5G19090.3 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc07G0017610 AT1G03220.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0017620 AT3G05140.2 0 0 ROP binding protein kinases 2;(source:Araport11) Ipc07G0017630 AT1G54740.1 Protein of unknown function (DUF3049) 0 FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc07G0017640 AT3G10760.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc07G0017650 AT5G27380.1 glutathione synthetase 2 Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2;(source:Araport11) Ipc07G0017660 AT1G05070.1 Protein of unknown function (DUF1068) 0 transmembrane protein, putative (DUF1068);(source:Araport11) Ipc07G0017670 AT3G05170.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc07G0017680 AT5G27395.2 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein 0 Mitochondrial inner membrane translocase complex, subunit Tim44-related protein;(source:Araport11) Ipc07G0017690 AT5G27390.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0 tagatose-6-phosphate ketose/aldose isomerase, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc07G0017700 AT1G54780.1 thylakoid lumen 18.3 kDa protein Encodes a thylakoid lumen protein regulating photosystem II repair cycle. Has acid phosphatase activity. The mRNA is cell-to-cell mobile. thylakoid lumen 18.3 kDa protein;(source:Araport11) Ipc07G0017710 AT1G54790.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc07G0017720 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc07G0017730 AT3G04600.3 Nucleotidylyl transferase superfamily protein 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc07G0017740 AT5G27400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2). Note that the At5g27410.2 gene model (TAIR10) of the adjacent locus has been obsoleted due to the lack of experimental support. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0017750 AT5G27410.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). Note that the At5g27410.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc07G0017760 AT5G43100.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0017770 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc07G0017780 AT5G27290.1 0 0 stress regulated protein;(source:Araport11) Ipc07G0017790 AT5G27320.1 alpha/beta-Hydrolases superfamily protein Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0017800 AT1G54710.1 homolog of yeast autophagy 18 (ATG18) H 0 autophagy 18h-like protein;(source:Araport11) Ipc07G0017810 AT2G02040.1 peptide transporter 2 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. peptide transporter 2;(source:Araport11) Ipc07G0017820 AT2G42000.2 Plant EC metallothionein-like protein, family 15 AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds. plant EC metallothionein family protein;(source:Araport11) Ipc07G0017830 AT5G03760.1 Nucleotide-diphospho-sugar transferases superfamily protein encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc07G0017840 AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein threonine synthase Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc07G0017850 #N/A #N/A #N/A #N/A Ipc07G0017860 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc07G0017870 AT1G08860.1 Calcium-dependent phospholipid-binding Copine family protein Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death. Calcium-dependent phospholipid-binding Copine family protein;(source:Araport11) Ipc07G0017880 AT2G26430.4 0 Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast. arginine-rich cyclin 1;(source:Araport11) Ipc07G0017890 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0017900 AT1G08960.1 cation exchanger 11 Encodes a member of the Potassium-dependent sodium-calcium exchanger like-family that localizes to the plasma membrane and nuclear periphery, and has a role in mediating high-affinity K+ uptake and Na+ transport in yeast. cation exchanger 11;(source:Araport11) Ipc07G0017910 AT4G04910.1 AAA-type ATPase family protein N-ethylmaleimide sensitive factor AAA-type ATPase family protein;(source:Araport11) Ipc07G0017920 AT1G54850.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc07G0017930 AT5G27440.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0017940 AT5G10250.2 0 Encodes a protein with an N-terminal BTB/POZ domain and a C-terminal NPH3 family domain. dot3 mutants have defects in shoot and primary root growth and produce an aberrant parallel venation pattern in juvenile leaves. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc07G0017950 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0017960 AT2G46430.2 cyclic nucleotide gated channel 3 Encodes a cyclic nucleotide gated channel, downstream component of the signaling pathways leading to hypersensitive response (HR) resistance. cyclic nucleotide gated channel 3;(source:Araport11) Ipc07G0017970 AT3G05250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0017980 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc07G0017990 AT1G35040.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0018000 AT3G05250.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0018010 AT1G08980.1 amidase 1 Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer. amidase 1;(source:Araport11) Ipc07G0018020 #N/A #N/A #N/A #N/A Ipc07G0018030 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc07G0018040 AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. Structural maintenance of chromosomes (SMC) family protein;(source:Araport11) Ipc07G0018050 AT1G27460.3 0 encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.The mRNA is cell-to-cell mobile. no pollen germination related 1;(source:Araport11) Ipc07G0018060 AT5G27490.1 Integral membrane Yip1 family protein 0 Integral membrane Yip1 family protein;(source:Araport11) Ipc07G0018070 AT5G27520.1 peroxisomal adenine nucleotide carrier 2 encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth. peroxisomal adenine nucleotide carrier 2;(source:Araport11) Ipc07G0018080 AT5G27540.2 MIRO-related GTP-ase 1 Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development. MIRO-related GTP-ase 1;(source:Araport11) Ipc07G0018090 AT2G36010.1 E2F transcription factor 3 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. E2F transcription factor 3;(source:Araport11) Ipc07G0018100 AT4G20960.1 Cytidine/deoxycytidylate deaminase family protein encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc07G0018110 AT3G05330.1 cyclin family Encodes a protein with moderate sequence similarity to the maize microtubule-binding protein TANGLED1. A single base-pair deletion (-A) at position Chr3:1519176 in Columbia relative to the Landsberg erecta and Achkarren-2 ecotype (see ESTs DR378436 and CB26450) introduces a frame-shift and premature termination codon. The protein encoded from the Columbia gene is truncated by 29 amino acids relative to the Landsberg erecta and Achkarren-2 encoded proteins. Involved in the identification of the division plane during mitosis amd cytokinesis cyclin family;(source:Araport11) Ipc07G0018120 AT5G27550.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0018140 AT1G64570.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc07G0018130 #N/A #N/A #N/A #N/A Ipc07G0018150 AT3G48470.2 0 0 embryo defective 2423;(source:Araport11) Ipc07G0018160 AT3G05860.2 MADS-box transcription factor family protein 0 MADS-box transcription factor family protein;(source:Araport11) Ipc07G0018170 AT4G06688.1 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc07G0018180 AT5G51550.1 EXORDIUM like 3 0 EXORDIUM like 3;(source:Araport11) Ipc07G0018190 AT5G27560.4 0 0 DUF1995 domain protein, putative (DUF1995);(source:Araport11) Ipc07G0018200 AT3G21640.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein encodes a 42 kDa FK506-binding protein (AtFKBP42) that possesses similarity to multidomain peptidyl-prolyl cis/trans isomerases (PPIases, EC 5.2.1.8), which are known to be components of mammalian steroid hormone receptor complexes. The protein appears to be localized to the plasma membrane by electron microscopy and binds to HSP90.1 and calmodulin in vitro. It also aggregates citrate synthase in vitro but does NOT show PPIase activity in vivo. Mutants are reduced in size and exhibit disoriented growth in all organs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc07G0018210 AT1G09010.1 glycoside hydrolase family 2 protein 0 glycoside hydrolase family 2 protein;(source:Araport11) Ipc07G0018220 AT5G27600.1 long-chain acyl-CoA synthetase 7 Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5. long-chain acyl-CoA synthetase 7;(source:Araport11) Ipc07G0018230 AT3G05350.1 Metallopeptidase M24 family protein 0 Metallopeptidase M24 family protein;(source:Araport11) Ipc07G0018240 AT1G54990.1 alpha/beta-Hydrolases superfamily protein auxin response mutant (AXR4) The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0018250 AT1G55000.3 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc07G0018260 AT4G14950.1 SNARE associated Golgi protein family KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway. SNARE associated Golgi protein family;(source:Araport11) Ipc07G0018270 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc07G0018280 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc07G0018290 AT1G55020.1 lipoxygenase 1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile. lipoxygenase 1;(source:Araport11) Ipc07G0018300 AT1G55020.1 lipoxygenase 1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile. lipoxygenase 1;(source:Araport11) Ipc07G0018310 AT5G36930.4 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc07G0018320 AT1G09020.1 homolog of yeast sucrose nonfermenting 4 Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. sucrose nonfermenting-like protein;(source:Araport11) Ipc07G0018330 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc07G0018340 AT1G09030.1 nuclear factor Y, subunit B4 0 nuclear factor Y, subunit B4;(source:Araport11) Ipc07G0018350 AT3G05390.1 0 0 S-adenosyl-L-methionine-dependent methyltransferase;(source:Araport11) Ipc07G0018360 AT3G50700.1 indeterminate(ID)-domain 2 zinc finger protein, similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2;(source:Araport11) Ipc07G0018370 AT3G05420.2 acyl-CoA binding protein 4 Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. acyl-CoA binding protein 4;(source:Araport11) Ipc07G0018380 AT5G27650.1 Tudor/PWWP/MBT superfamily protein PWWP domain protein involved in regulation of FLC and flowering time. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc07G0018390 AT3G62770.1 Transducin/WD40 repeat-like superfamily protein Required for autophagosome formation during nutrient deprivation and senescence, promotes pexophagy during seedling development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc07G0018400 AT5G27660.2 0 Encodes a protein with similarity to human PARK13, a mitochondrial protease implicated in Parkinson disease. DEG14 is induced by heat stress and involved in degradation of misfolded proteins. Trypsin family protein with PDZ domain-containing protein;(source:Araport11) Ipc07G0018410 AT5G27670.1 histone H2A 7 Encodes HTA7, a histone H2A protein. histone H2A 7;(source:Araport11) Ipc07G0018420 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0018430 AT3G52110.1 0 0 interferon-activable protein;(source:Araport11) Ipc07G0018440 AT1G56210.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc07G0018450 AT1G09090.2 respiratory burst oxidase homolog B NADPH-oxidase AtrbohB plays a role in seed after-ripening. Major producer of superoxide in germinating seeds. AtrbohB pre-mRNA is alternatively spliced in seeds in a hormonally and developmentally regulated manner. ABA caused accumulation of AtrbohB-ß mRNA and prevented prevented AtrbohB-a mRNA expression in fresh seeds. respiratory burst oxidase-like protein;(source:Araport11) Ipc07G0018460 AT5G13870.3 0 EXGT-A4, endoxyloglucan transferase, xyloglucan endotransglucosylase/hydrolase 5;(source:Araport11) Ipc07G0018470 AT3G05560.3 Ribosomal L22e protein family 0 Ribosomal L22e protein family;(source:Araport11) Ipc07G0018480 AT3G05470.1 Actin-binding FH2 (formin homology 2) family protein 0 Actin-binding FH2 (formin homology 2) family protein;(source:Araport11) Ipc07G0018490 AT1G47980.1 0 0 desiccation-like protein;(source:Araport11) Ipc07G0018500 AT3G05480.2 cell cycle checkpoint control protein family Involved in the regulation of DNA damage repair and homologous recombination. cell cycle checkpoint control protein family;(source:Araport11) Ipc07G0018510 AT3G05480.1 cell cycle checkpoint control protein family Involved in the regulation of DNA damage repair and homologous recombination. cell cycle checkpoint control protein family;(source:Araport11) Ipc07G0018520 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0018530 AT1G04635.1 ribonuclease P family protein / Rpp14 family protein 0 ribonuclease P family protein / Rpp14 family protein;(source:Araport11) Ipc07G0018540 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc07G0018550 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0018560 AT5G36210.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0018570 AT5G49290.3 0 0 receptor like protein 56;(source:Araport11) Ipc07G0018580 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc07G0018590 AT5G35200.2 0 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc07G0018600 AT3G05500.1 Rubber elongation factor protein (REF) Encodes a protein that associates with lipid droplet surfaces and shares sequence homology with family of small rubber particle proteins. The mRNA is cell-to-cell mobile. Rubber elongation factor protein (REF);(source:Araport11) Ipc07G0018610 AT1G09130.2 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc07G0018620 AT5G27710.1 0 0 T-box protein;(source:Araport11) Ipc07G0018630 AT3G05510.1 Phospholipid/glycerol acyltransferase family protein 0 Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc07G0018640 AT3G05510.1 Phospholipid/glycerol acyltransferase family protein 0 Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc07G0018650 AT5G15250.1 FTSH protease 6 Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. FTSH protease 6;(source:Araport11) Ipc07G0018660 AT5G27720.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc07G0018670 AT5G27730.1 Protein of unknown function (DUF1624) 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc07G0018680 AT5G15500.2 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0018690 AT3G05530.1 regulatory particle triple-A ATPase 5A Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype. The mRNA is cell-to-cell mobile. regulatory particle triple-A ATPase 5A;(source:Araport11) Ipc07G0018700 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc07G0018710 AT2G23270.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0018720 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc07G0018730 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0018740 AT3G23460.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0018750 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc07G0018760 AT2G17190.1 ubiquitin family protein Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12. ubiquitin family protein;(source:Araport11) Ipc07G0018770 AT3G05545.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0018780 AT1G09140.3 0 Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SERINE-ARGININE PROTEIN 30;(source:Araport11) Ipc07G0018790 AT3G05550.1 Hypoxia-responsive family protein 0 Hypoxia-responsive family protein;(source:Araport11) Ipc07G0018800 AT3G05560.3 Ribosomal L22e protein family 0 Ribosomal L22e protein family;(source:Araport11) Ipc07G0018810 AT4G14465.1 AT-hook motif nuclear-localized protein 20 0 AT-hook motif nuclear-localized protein 20;(source:Araport11) Ipc07G0018820 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc07G0018830 AT2G45330.2 RNA 2'-phosphotransferase, Tpt1 / KptA family 0 RNA 2-phosphotransferase, Tpt1 / KptA family;(source:Araport11) Ipc07G0018840 AT5G51430.1 conserved oligomeric Golgi complex component-related / COG complex component-related Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology. conserved oligomeric Golgi complex component-related / COG complex component-like protein;(source:Araport11) Ipc07G0018850 #N/A #N/A #N/A #N/A Ipc07G0018860 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc07G0018870 AT1G20980.1 squamosa promoter binding protein-like 14 Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture. The mRNA is cell-to-cell mobile. squamosa promoter binding protein-like 14;(source:Araport11) Ipc07G0018880 AT5G27820.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc07G0018890 AT1G56220.1 Dormancy/auxin associated family protein 0 Dormancy/auxin associated family protein;(source:Araport11) Ipc07G0018900 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc07G0018910 AT5G27830.3 0 0 folate receptor family protein;(source:Araport11) Ipc07G0018920 AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein Encodes a Type One Protein Phosphatase that acts as a nucleocytoplasmic negative regulator of tip growth. Mutants affect pollen germination, pollen tube growth, and root hair growth. It acts genetically downstream of ANX1 (AT3G04690) and ANX2 (AT5G28680). Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc07G0018930 AT4G15920.1 Nodulin MtN3 family protein Encodes a vacuolar fructose transporter expressed in parenchyma and xylem that controls leaf fructose content. When its expression is reduced, fructose accumulates in leaves. Nodulin MtN3 family protein;(source:Araport11) Ipc07G0018940 AT2G21470.2 SUMO-activating enzyme 2 Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 2;(source:Araport11) Ipc07G0018950 AT4G15920.1 Nodulin MtN3 family protein Encodes a vacuolar fructose transporter expressed in parenchyma and xylem that controls leaf fructose content. When its expression is reduced, fructose accumulates in leaves. Nodulin MtN3 family protein;(source:Araport11) Ipc07G0018960 AT4G15920.1 Nodulin MtN3 family protein Encodes a vacuolar fructose transporter expressed in parenchyma and xylem that controls leaf fructose content. When its expression is reduced, fructose accumulates in leaves. Nodulin MtN3 family protein;(source:Araport11) Ipc07G0018970 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0018980 AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein 0 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein;(source:Araport11) Ipc07G0018990 AT3G05590.1 ribosomal protein L18 Encodes cytoplasmic ribosomal protein L18. ribosomal protein L18;(source:Araport11) Ipc07G0019000 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0007900 AT1G74680.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc12G0007890 AT1G69588.1 CLAVATA3/ESR-RELATED 45 Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini CLAVATA3/ESR-RELATED 45;(source:Araport11) Ipc12G0007880 AT1G46912.2 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc12G0007870 AT3G47550.6 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc12G0007860 AT5G62440.1 Protein of unknown function (DUF3223) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. EMB514 (DUF3223);(source:Araport11) Ipc12G0007850 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0007840 AT1G18790.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc12G0007830 AT3G47520.1 malate dehydrogenase Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts. The mRNA is cell-to-cell mobile. malate dehydrogenase;(source:Araport11) Ipc12G0007820 AT5G01370.1 ALC-interacting protein 1 Nuclear protein with a lysine-rich domain and a C-terminal serine-rich domain. Interacts with Alcatraz (ALC). ACI1 is mainly expressed in the vascular system. Involved in cell separation during fruit dehiscence. ALC-interacting protein 1;(source:Araport11) Ipc12G0007810 AT1G73820.2 0 Protein phosphatase which physically interacts with the RRM1 motif of FCA to antagonize FCA binding with COOLAIR, which is critical for PRC2 enrichment and H3K27me3 deposition. Ssu72-like family protein;(source:Araport11) Ipc12G0007800 AT1G74470.1 Pyridine nucleotide-disulphide oxidoreductase family protein Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. The mRNA is cell-to-cell mobile. Pyridine nucleotide-disulfide oxidoreductase family protein;(source:Araport11) Ipc12G0007790 AT1G74460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc12G0007780 AT3G47500.1 cycling DOF factor 3 Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions. cycling DOF factor 3;(source:Araport11) Ipc12G0007770 #N/A #N/A #N/A #N/A Ipc12G0007760 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc12G0007750 AT5G61300.2 0 0 hypothetical protein;(source:Araport11) Ipc12G0007740 AT3G56140.3 0 0 DUF399 family protein, putative (DUF399 and DUF3411);(source:Araport11) Ipc12G0007730 AT5G39670.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc12G0007720 AT1G08570.1 atypical CYS HIS rich thioredoxin 4 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. The mRNA is cell-to-cell mobile. atypical CYS HIS rich thioredoxin 4;(source:Araport11) Ipc12G0007710 AT1G18730.1 NDH dependent flow 6 likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity. The mRNA is cell-to-cell mobile. NDH dependent flow 6;(source:Araport11) Ipc12G0007700 AT1G18720.2 0 0 ER membrane protein, putative (DUF962);(source:Araport11) Ipc12G0007690 AT5G61430.1 NAC domain containing protein 100 0 NAC domain containing protein 100;(source:Araport11) Ipc12G0007680 AT3G05000.1 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc12G0007670 AT3G03760.1 LOB domain-containing protein 20 0 LOB domain-containing protein 20;(source:Araport11) Ipc12G0007660 AT1G18700.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc12G0007650 AT1G74410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0007640 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc12G0007630 AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc12G0007620 AT5G61390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0007610 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc12G0007600 AT5G61380.1 CCT motif -containing response regulator protein Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. The mRNA is cell-to-cell mobile. CCT motif -containing response regulator protein;(source:Araport11) Ipc12G0007590 AT3G29100.3 0 Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated. vesicle transport V-snare 13;(source:Araport11) Ipc12G0007580 AT5G07720.1 Galactosyl transferase GMA12/MNN10 family protein 0 Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11) Ipc12G0007570 AT1G18660.3 zinc finger (C3HC4-type RING finger) family protein Membrane localized protein of unknown function. Involved in negative regulation of immune response. Mutants have increased resistance to pathogens. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc12G0007560 AT5G61350.1 Protein kinase superfamily protein Encodes a membrane-localized receptor-like kinase that regulates root hair tip growth by maintaining cytoplasmic Ca2+ gradients. Knockouts of CAP1 produced more cytoplasmic NH4+ and ceased growth of root hairs on MS medium except when NH4+ was depleted; NH4+ depletion reestablished the Ca2+ gradient necessary for normal growth. The lower net NH4+ influx across the vacuolar membrane and relatively alkaline cytosolic pH of root hairs in cap1-1 relative to wild type implied that mutation of CAP1 results in more NH4+ accumulation in the cytoplasm. Furthermore, CAP1 functionally complemented npr1 kinase yeast mutant defective in high-affinity NH4+ uptake via MEP2, distinguishing CAP1 as a cytosolic modulator of NH4+ level that participates in NH4+ homeostasis-regulated root hair growth by modulating tip-focused cytoplasmic Ca2+ gradients. Protein kinase superfamily protein;(source:Araport11) Ipc12G0007550 AT3G01090.3 SNF1 kinase homolog 10 encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10;(source:Araport11) Ipc12G0007540 AT5G07740.3 0 0 actin binding protein;(source:Araport11) Ipc01G0024860 #N/A #N/A #N/A #N/A Ipc01G0024870 AT1G12840.1 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3);(source:Araport11) Ipc13G0009750 AT5G35220.1 Peptidase M50 family protein Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis. Mutant studies suggest that EGY1 is involved in the regulation of nuclear gene expression response to ammonium stress and interacts with ABA signaling. Peptidase M50 family protein;(source:Araport11) Ipc13G0009740 AT5G13530.2 protein kinases;ubiquitin-protein ligases Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. protein kinases;(source:Araport11) Ipc13G0009730 AT5G17920.2 Cobalamin-independent synthase family protein Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. Cobalamin-independent synthase family protein;(source:Araport11) Ipc13G0009720 AT1G54400.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc13G0009710 AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0009700 AT5G17980.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc13G0009690 AT5G43990.15 0 Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc13G0009680 AT3G03800.2 0 member of SYP13 Gene Family syntaxin of plants 131;(source:Araport11) Ipc13G0009670 AT2G38650.2 galacturonosyltransferase 7 0 galacturonosyltransferase 7;(source:Araport11) Ipc13G0009660 AT5G41920.1 GRAS family transcription factor Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification. GRAS family transcription factor;(source:Araport11) Ipc13G0009650 AT2G38660.3 Amino acid dehydrogenase family protein 0 Amino acid dehydrogenase family protein;(source:Araport11) Ipc13G0009640 AT5G01015.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0009630 AT2G38620.2 cyclin-dependent kinase B1;2 Encodes a member of a plant specific family of cyclin dependent kinases. cyclin-dependent kinase B1;(source:Araport11) Ipc13G0009620 AT2G29400.1 type one protein phosphatase 1 Type 1 protein phosphatase, expressed in roots, rosettes and flowers type one protein phosphatase 1;(source:Araport11) Ipc13G0009610 AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0009600 AT4G20780.1 calmodulin like 42 Calcium sensor involved in trichome branching. calmodulin like 42;(source:Araport11) Ipc13G0009590 AT1G67650.1 SRP72 RNA-binding domain 0 SRP72 RNA-binding domain-containing protein;(source:Araport11) Ipc13G0009580 AT5G60390.3 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc13G0009570 AT4G38510.5 ATPase, V1 complex, subunit B protein One of three genes encoding the vacuolar ATP synthase subunit B1. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro. ATPase, V1 complex, subunit B protein;(source:Araport11) Ipc13G0009560 AT1G36005.1 0 0 receptor-like kinase;(source:Araport11) Ipc13G0009550 AT5G01970.1 0 0 unknown protein;(source:TAIR10) Ipc13G0009540 AT3G08600.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc13G0009530 AT3G08610.1 0 0 NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit;(source:Araport11) Ipc13G0009520 AT2G38610.2 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc13G0009510 AT3G08640.1 Protein of unknown function (DUF3411) 0 alphavirus core family protein (DUF3411);(source:Araport11) Ipc13G0009500 AT3G08670.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc13G0009490 AT3G08710.3 0 Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication. thioredoxin H-type 9;(source:Araport11) Ipc13G0009480 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc13G0009470 AT5G16630.2 DNA repair protein Rad4 family 0 DNA repair protein Rad4 family;(source:Araport11) Ipc13G0009460 AT5G01930.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc13G0009450 AT3G08720.4 0 Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. serine/threonine protein kinase 2;(source:Araport11) Ipc13G0009440 AT4G17340.1 tonoplast intrinsic protein 2;2 0 tonoplast intrinsic protein 2;(source:Araport11) Ipc13G0009430 AT5G04930.1 aminophospholipid ATPase 1 Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 1;(source:Araport11) Ipc13G0009420 AT3G56370.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0009410 AT3G51580.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0009400 AT3G08760.3 0 Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants. Protein kinase superfamily protein;(source:Araport11) Ipc13G0009390 AT5G59320.1 lipid transfer protein 3 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 3;(source:Araport11) Ipc13G0009380 AT3G51610.1 0 Encodes a membrane protein NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION (NPU). Involved in primexine deposition and plasma membrane undulation during early pollen wall development. ATP-dependent helicase/deoxyribonuclease subunit B;(source:Araport11) Ipc13G0009370 AT3G51620.2 PAP/OAS1 substrate-binding domain superfamily 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc13G0009360 AT5G01830.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0009350 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc13G0009340 AT3G51730.1 saposin B domain-containing protein 0 saposin B domain-containing protein;(source:Araport11) Ipc13G0009330 AT2G38370.2 0 0 weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc13G0009320 AT2G40475.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0009310 AT2G30970.2 aspartate aminotransferase 1 ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1;(source:Araport11) Ipc13G0009300 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc13G0009290 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc13G0009280 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc13G0009270 AT2G38410.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc13G0009260 AT5G01750.2 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc13G0009250 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0009240 AT5G01750.2 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc13G0009230 AT2G38420.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0009220 AT3G61510.1 ACC synthase 1 Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity. ACC synthase 1;(source:Araport11) Ipc13G0009200 AT2G33560.2 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) Encodes BUBR1. May have the spindle assembly checkpoint protein functions conserved from yeast to humans. BUB1-related (BUB1: budding uninhibited by benzymidazol 1);(source:Araport11) Ipc13G0009210 AT2G33560.2 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) Encodes BUBR1. May have the spindle assembly checkpoint protein functions conserved from yeast to humans. BUB1-related (BUB1: budding uninhibited by benzymidazol 1);(source:Araport11) Ipc13G0009190 AT5G01740.1 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc13G0009180 AT2G38440.1 SCAR homolog 2 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype. The mRNA is cell-to-cell mobile. SCAR homolog 2;(source:Araport11) Ipc13G0009170 AT5G01700.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0009160 AT5G01660.2 0 0 influenza virus NS1A-binding protein;(source:Araport11) Ipc13G0009150 AT3G51660.1 Tautomerase/MIF superfamily protein 0 Tautomerase/MIF superfamily protein;(source:Araport11) Ipc13G0009140 AT3G08800.1 ARM repeat superfamily protein Encodes a nuclear and endosome localized protein with ARM and HEAT domains that interacts with SHR and other non-cell-autonomous proteins and may be involved in their intercellular movement. Hypomorphic mutant phenotypes suggest involvement of the protein in root patterning. ARM repeat superfamily protein;(source:Araport11) Ipc13G0009130 AT5G01650.1 Tautomerase/MIF superfamily protein 0 Tautomerase/MIF superfamily protein;(source:Araport11) Ipc13G0009120 AT2G38360.1 prenylated RAB acceptor 1.B4 0 prenylated RAB acceptor 1.B4;(source:Araport11) Ipc13G0009110 AT1G19350.6 Brassinosteroid signalling positive regulator (BZR1) family protein Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes. Works with BRAVO to regulate QC division in the root. Brassinosteroid signaling positive regulator (BZR1) family protein;(source:Araport11) Ipc13G0009100 AT2G38320.1 TRICHOME BIREFRINGENCE-LIKE 34 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL34 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. This biochemical phenotype can be observed in tbl34 esk1, double mutant and tbl34 tbl35 esk1 triple mutants. TRICHOME BIREFRINGENCE-LIKE 34;(source:Araport11) Ipc13G0009090 AT5G01610.2 0 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc13G0009080 AT1G07030.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc13G0009070 AT5G01600.1 ferretin 1 Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ferretin 1;(source:Araport11) Ipc13G0009060 AT5G24830.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0009050 AT3G51750.2 0 0 hypothetical protein;(source:Araport11) Ipc13G0009040 AT5G01590.1 0 0 histone-lysine N-methyltransferase ATXR3-like protein;(source:Araport11) Ipc13G0009030 AT5G06460.1 ubiquitin activating enzyme 2 Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. The mRNA is cell-to-cell mobile. ubiquitin activating enzyme 2;(source:Araport11) Ipc13G0009020 AT4G08250.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc13G0009010 AT3G08943.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0009000 AT3G51770.2 tetratricopeptide repeat (TPR)-containing protein Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc13G0008990 AT2G46740.1 D-arabinono-1,4-lactone oxidase family protein Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid. D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc13G0008980 AT5G58570.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0008970 AT3G51780.1 BCL-2-associated athanogene 4 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 4;(source:Araport11) Ipc13G0008960 AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc14G0010770 AT2G22560.1 Kinase interacting (KIP1-like) family protein 0 Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc14G0010780 AT5G13260.1 0 0 myosin;(source:Araport11) Ipc14G0010790 AT3G26744.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. It also binds to and inhibits the expression of ABI3. Mutants are defective in cold-regulated gene expression and ABA signaling druing seed germination.. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. Together with ZOU, ICE1 determines primary seed dormancy depth independently of their joint role in endosperm development.ICE1 interacts with ABI5. Also members of the DELLA family, which repress ICE1 function. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0010800 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0010810 AT5G13290.2 Protein kinase superfamily protein Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels. Protein kinase superfamily protein;(source:Araport11) Ipc14G0010820 AT1G78800.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc14G0010830 AT5G13300.1 ARF GTPase-activating protein Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. ARF GTPase-activating protein;(source:Araport11) Ipc14G0010840 AT5G13310.2 0 0 hypothetical protein;(source:Araport11) Ipc14G0010850 AT2G33550.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc14G0010860 AT4G21960.1 Peroxidase superfamily protein Encodes AT4g21960 (AT4g21960/T8O5_170). The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc14G0010870 AT5G07290.1 MEI2-like 4 AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like 4;(source:Araport11) Ipc14G0010880 AT1G28120.1 0 0 ubiquitin thioesterase otubain-like protein;(source:Araport11) Ipc14G0010890 AT5G13330.1 related to AP2 6l encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. related to AP2 6l;(source:Araport11) Ipc14G0010900 AT1G28140.1 0 0 integral membrane family protein;(source:Araport11) Ipc14G0010910 AT1G57820.3 0 Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts. Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc14G0010920 AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit 0 Ubiquinol-cytochrome C reductase iron-sulfur subunit;(source:Araport11) Ipc14G0010930 AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc14G0010940 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0010950 AT2G33240.4 0 member of Myosin-like proteins myosin XI D;(source:Araport11) Ipc14G0010960 AT3G21000.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc14G0010970 AT5G39820.1 NAC domain containing protein 94 0 NAC domain containing protein 94;(source:Araport11) Ipc14G0010980 AT5G61840.1 Exostosin family protein Encodes a UDP-Xyl:beta-(1,4)-xylosyl transferase. Exostosin family protein;(source:Araport11) Ipc14G0010990 AT5G13420.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc14G0011000 AT5G13410.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc14G0011010 AT1G11680.1 CYTOCHROME P450 51G1 putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis. The mRNA is cell-to-cell mobile. CYTOCHROME P450 51G1;(source:Araport11) Ipc14G0011020 AT5G13400.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0011030 AT2G17905.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc14G0011040 AT5G13910.1 Integrase-type DNA-binding superfamily protein Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (LEAFY PETIOLE). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. Acts as a positive regulator of gibberellic acid-induced germination. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0011050 AT2G33730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Homolog of the DEADbox pre-mRNA splicing factor Prp28 which regulates abundance of miRNA. It plays essential roles in miRNA biogenesis and interacts with the DCL1 complex and positively influences pri-miRNA processing. SMA1 binds the promoter region of genes encoding pri-miRNAs (MIRs) and is required for MIR transcription. It enhances the abundance of the DCL1 protein levels through promoting the splicing of the DCL1 pre-mRNAs. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0011060 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc14G0011070 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc14G0011080 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc14G0011090 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc14G0011100 AT3G26935.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc14G0011110 AT5G47920.1 0 0 transcription elongation factor;(source:Araport11) Ipc14G0011120 AT5G39680.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0011130 AT1G44900.1 minichromosome maintenance (MCM2/3/5) family protein Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function. minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc14G0011140 AT1G44960.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc14G0011150 AT1G44770.1 0 0 elongation factor;(source:Araport11) Ipc14G0011160 AT5G63610.1 cyclin-dependent kinase E;1 significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. cyclin-dependent kinase E;(source:Araport11) Ipc14G0011170 AT4G08280.3 0 0 Thioredoxin superfamily protein;(source:Araport11) Ipc14G0011180 AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc14G0011190 AT1G22930.1 T-complex protein 11 0 T-complex protein 11;(source:Araport11) Ipc14G0011200 AT4G15210.4 0 cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. beta-amylase 5;(source:Araport11) Ipc14G0011210 AT1G35340.1 ATP-dependent protease La (LON) domain protein 0 ATP-dependent protease La (LON) domain protein;(source:Araport11) Ipc14G0011220 AT1G35420.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0011230 AT1G72170.1 Domain of unknown function (DUF543) 0 MICOS complex subunit, putative (DUF543);(source:Araport11) Ipc14G0011240 AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc14G0011250 AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc14G0011260 AT1G22540.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0011270 AT1G22540.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc14G0011280 AT5G20220.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0011300 AT2G02750.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0011310 AT1G17615.1 Disease resistance protein (TIR-NBS class) TN2 is an atypical TIR-NBS protein that lacks the LRR domain common in typical NLR receptors. It interacts with EXO70B1, a subunit of the exocyst complex. Loss of function mutants in TN2 can suppress EXO70B1 mutants suggesting that EXO70B1 acts through TN2. Disease resistance protein (TIR-NBS class);(source:Araport11) Ipc14G0011290 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0011320 AT1G10950.1 transmembrane nine 1 Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. transmembrane nine 1;(source:Araport11) Ipc14G0011330 AT1G72100.1 late embryogenesis abundant domain-containing protein / LEA domain-containing protein 0 late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11) Ipc14G0011340 AT2G01060.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc14G0011350 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0011360 AT3G48060.3 0 0 BAH and TFIIS domain-containing protein;(source:Araport11) Ipc14G0011370 AT1G22620.1 Phosphoinositide phosphatase family protein SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization. Phosphoinositide phosphatase family protein;(source:Araport11) Ipc14G0011380 AT1G22630.1 0 0 SSUH2-like protein;(source:Araport11) Ipc14G0011390 AT5G51810.1 gibberellin 20 oxidase 2 Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock. gibberellin 20 oxidase 2;(source:Araport11) Ipc14G0011400 AT1G72040.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0011410 AT4G09510.1 cytosolic invertase 2 CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues. cytosolic invertase 2;(source:Araport11) Ipc14G0011420 AT5G47760.1 2-phosphoglycolate phosphatase 2 serine/threonine protein kinase 2-phosphoglycolate phosphatase 2;(source:Araport11) Ipc14G0011430 AT1G72180.1 Leucine-rich receptor-like protein kinase family protein Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc14G0011440 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0011450 AT5G47840.1 adenosine monophosphate kinase 0 adenosine monophosphate kinase;(source:Araport11) Ipc14G0011460 AT1G22660.1 Polynucleotide adenylyltransferase family protein 0 Polynucleotide adenylyltransferase family protein;(source:Araport11) Ipc14G0011470 AT1G35620.1 PDI-like 5-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants. The mRNA is cell-to-cell mobile. PDI-like 5-2;(source:Araport11) Ipc14G0011480 AT1G72550.1 tRNA synthetase beta subunit family protein 0 tRNA synthetase beta subunit family protein;(source:Araport11) Ipc14G0011490 AT1G71980.1 Protease-associated (PA) RING/U-box zinc finger family protein RMR2 is a secretory pathway protein localized to the trans-golgi network. It belongs to a family of vacuolar sorting receptors. If forms heterodimers with RMR1. Protease-associated (PA) RING/U-box zinc finger family protein;(source:Araport11) Ipc14G0011500 AT1G50120.1 0 Encodes a Golgi-localized protein which regulates pollen tube growth. Required for TGN formation and Golgi structure maintenance. immunoglobulin;(source:Araport11) Ipc14G0011510 AT1G71970.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0011520 AT1G71960.1 ATP-binding casette family G25 Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses. ATP-binding casette family G25;(source:Araport11) Ipc14G0011530 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0011540 AT1G66210.1 Subtilisin-like serine endopeptidase family protein 0 Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc14G0011550 AT1G04200.1 0 0 dyggve-melchior-clausen syndrome protein;(source:Araport11) Ipc14G0011560 AT1G54690.1 gamma histone variant H2AX Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. gamma histone variant H2AX;(source:Araport11) Ipc14G0011570 AT1G37130.1 nitrate reductase 2 Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940. The mRNA is cell-to-cell mobile. nitrate reductase 2;(source:Araport11) Ipc14G0011580 AT5G21100.1 Plant L-ascorbate oxidase 0 Plant L-ascorbate oxidase;(source:Araport11) Ipc14G0011590 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0011600 AT3G20740.1 Transducin/WD40 repeat-like superfamily protein Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc14G0011610 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc14G0011620 AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc14G0011630 AT1G36990.1 0 0 C-jun-amino-terminal kinase-interacting protein;(source:Araport11) Ipc14G0011640 AT1G36990.1 0 0 C-jun-amino-terminal kinase-interacting protein;(source:Araport11) Ipc14G0011650 AT1G36980.2 0 0 transmembrane 50A-like protein;(source:Araport11) Ipc14G0011660 AT1G77800.2 PHD finger family protein 0 PHD finger family protein;(source:Araport11) Ipc14G0011670 AT1G36940.1 0 0 myotubularin-like protein;(source:Araport11) Ipc14G0011680 AT4G33460.1 ABC transporter family protein member of NAP subfamily ABC transporter family protein;(source:Araport11) Ipc14G0011690 AT1G36390.2 Co-chaperone GrpE family protein Chloroplast GrpE protein. Co-chaperone GrpE family protein;(source:Araport11) Ipc14G0011700 AT2G44950.1 histone mono-ubiquitination 1 The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. histone mono-ubiquitination 1;(source:Araport11) Ipc14G0011710 AT3G02220.1 0 0 small acidic-like protein;(source:Araport11) Ipc14G0011720 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc14G0011730 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc14G0011740 AT2G21120.1 Protein of unknown function (DUF803) Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis. magnesium transporter, putative (DUF803);(source:Araport11) Ipc14G0011750 AT3G18080.1 B-S glucosidase 44 0 B-S glucosidase 44;(source:Araport11) Ipc14G0011760 AT3G18080.1 B-S glucosidase 44 0 B-S glucosidase 44;(source:Araport11) Ipc14G0011770 AT4G20130.1 plastid transcriptionally active 14 0 plastid transcriptionally active 14;(source:Araport11) Ipc14G0011780 AT1G71870.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc14G0011790 AT2G07675.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc14G0011800 AT3G14540.2 0 Encodes a sesterterpene synthase responsible for the biosynthesis of the pentacyclic sesterterpene (−)-retigeranin B with a 5- 5-5-6-5 fused ring system. Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc14G0011810 AT2G01420.1 Auxin efflux carrier family protein Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452). Auxin efflux carrier family protein;(source:Araport11) Ipc14G0011820 AT5G55400.3 0 Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. Actin binding Calponin homology (CH) domain-containing protein;(source:Araport11) Ipc14G0011830 AT1G71860.3 protein tyrosine phosphatase 1 Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress. protein tyrosine phosphatase 1;(source:Araport11) Ipc14G0011840 AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0011850 AT1G34320.2 0 0 Ikzf5 (DUF668);(source:Araport11) Ipc14G0011860 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc14G0011870 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc14G0011880 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc14G0011890 AT1G22710.1 sucrose-proton symporter 2 Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. sucrose-proton symporter 2;(source:Araport11) Ipc14G0011900 AT5G41920.1 GRAS family transcription factor Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification. GRAS family transcription factor;(source:Araport11) Ipc14G0011910 AT1G34355.1 forkhead-associated (FHA) domain-containing protein Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants. forkhead-associated (FHA) domain-containing protein;(source:Araport11) Ipc14G0011920 AT1G22700.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0011930 AT1G34380.2 5'-3' exonuclease family protein 0 5-3 exonuclease family protein;(source:Araport11) Ipc14G0011940 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc14G0011950 AT1G34550.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc14G0011960 AT1G65280.2 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc14G0011970 AT3G53010.1 Domain of unknown function (DUF303) 0 carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc14G0011980 AT3G53010.1 Domain of unknown function (DUF303) 0 carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc14G0011990 AT5G43860.1 chlorophyllase 2 Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation. chlorophyllase 2;(source:Araport11) Ipc14G0012000 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012010 AT3G12915.1 Ribosomal protein S5/Elongation factor G/III/V family protein 0 Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc14G0012020 AT1G55020.1 lipoxygenase 1 lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile. lipoxygenase 1;(source:Araport11) Ipc14G0012030 AT4G34215.2 Domain of unknown function (DUF303) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds. carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc14G0012040 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012050 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0012060 AT4G34215.2 Domain of unknown function (DUF303) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds. carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc14G0012070 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012080 AT2G14720.2 vacuolar sorting receptor 4 encodes a vacuolar sorting receptor vacuolar sorting receptor 4;(source:Araport11) Ipc14G0012090 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012100 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012110 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc14G0012120 AT3G53010.1 Domain of unknown function (DUF303) 0 carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc14G0012130 AT5G43860.1 chlorophyllase 2 Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation. chlorophyllase 2;(source:Araport11) Ipc14G0012140 AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc14G0012150 AT1G21910.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0012160 AT4G08250.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc14G0012170 #N/A #N/A #N/A #N/A Ipc14G0012180 AT5G08640.2 flavonol synthase 1 Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR). flavonol synthase 1;(source:Araport11) Ipc14G0012190 AT2G41705.4 0 Encodes a fluoride export protein. camphor resistance CrcB family protein;(source:Araport11) Ipc14G0012200 AT1G75710.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc14G0012210 AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain Member of the Oxa1 super family protein insertases. Involved in biogenesis of mitochondrial respiratory chain complex IV, specifically via membrane insertion of COX2. Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc14G0012220 AT1G77720.1 putative protein kinase 1 Encodes a predicted protein kinase based on sequence similarity. putative protein kinase 1;(source:Araport11) Ipc14G0012230 AT4G16050.1 Aminotransferase-like, plant mobile domain family protein 0 Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc14G0012240 AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1 Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. phosphatidylinositol-4-phosphate 5-kinase 1;(source:Araport11) Ipc14G0012250 AT5G14320.1 Ribosomal protein S13/S18 family 0 Ribosomal protein S13/S18 family;(source:Araport11) Ipc14G0012260 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0012270 AT1G37140.1 MEI2 C-terminal RRM only like 1 Amember of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only. MCT1 expression is increased in the presence of ABA and RNAi suppression showed increased germination rates in the presence of ABA. MEI2 C-terminal RRM only like 1;(source:Araport11) Ipc14G0012280 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0012290 AT1G26360.1 methyl esterase 13 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein. methyl esterase 13;(source:Araport11) Ipc14G0012300 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0012310 AT3G22845.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc14G0012320 AT1G04210.1 Leucine-rich repeat protein kinase family protein Encodes a putative Raf-related kinase. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0012330 AT3G22890.1 ATP sulfurylase 1 encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism. The mRNA is cell-to-cell mobile. ATP sulfurylase 1;(source:Araport11) Ipc14G0012340 AT4G14650.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0012350 AT4G14640.1 calmodulin 8 encodes a divergent member of calmodulin, which is an EF-hand family of Ca2+-binding proteins. This gene is expressed in leaves, flowers and siliques. The gene functionally complements yeast calmodulin 1 (CAM1). Also the protein does not form formed a complex with a basic amphiphilic helical peptide in the presence of Ca2+ in vitro. Authors suggest that this gene may represent a Ca2+-binding sensor protein that interacts with a more limited set of target proteins than do more conventional CaM isoforms. calmodulin 8;(source:Araport11) Ipc14G0012360 AT3G22942.1 G-protein gamma subunit 2 heterotrimeric G-protein gamma subunit 2(AGG2) G-protein gamma subunit 2;(source:Araport11) Ipc14G0012370 AT3G22950.2 ADP-ribosylation factor C1 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1;(source:Araport11) Ipc14G0012380 AT3G22990.1 ARM repeat superfamily protein Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues. LFR is functionally associated with AS2 to mediate leaf development. ARM repeat superfamily protein;(source:Araport11) Ipc14G0012390 AT1G79940.3 DnaJ / Sec63 Brl domains-containing protein J domain protein localized in ER membrane. Mutants have defective pollen germination. DnaJ / Sec63 Brl domains-containing protein;(source:Araport11) Ipc14G0012400 AT4G14615.1 0 0 sporulation-specific protein;(source:Araport11) Ipc14G0012410 AT3G23000.1 CBL-interacting protein kinase 7 Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 7;(source:Araport11) Ipc14G0012420 AT3G23020.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0012430 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0012440 AT5G50230.1 Transducin/WD40 repeat-like superfamily protein autophagy-related (ATG) gene Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc14G0012450 AT5G43745.1 Protein of unknown function (DUF1012) 0 ion channel POLLUX-like protein, putative (DUF1012);(source:Araport11) Ipc14G0012460 AT1G04230.1 Protein of unknown function (DUF2361) 0 rRNA-processing EFG1-like protein (DUF2361);(source:Araport11) Ipc14G0012470 AT5G43710.1 Glycosyl hydrolase family 47 protein 0 Glycosyl hydrolase family 47 protein;(source:Araport11) Ipc14G0012480 AT5G43700.1 AUX/IAA transcriptional regulator family protein Auxin inducible protein similar to transcription factors. AUX/IAA transcriptional regulator family protein;(source:Araport11) Ipc14G0012490 AT4G14550.1 indole-3-acetic acid inducible 14 IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. indole-3-acetic acid inducible 14;(source:Araport11) Ipc14G0012500 AT4G34890.1 xanthine dehydrogenase 1 Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance. xanthine dehydrogenase 1;(source:Araport11) Ipc14G0012510 AT5G09500.1 Ribosomal protein S19 family protein 0 Ribosomal protein S19 family protein;(source:Araport11) Ipc14G0012520 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0012530 AT2G30630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0012540 AT4G14500.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc14G0012550 AT3G23090.5 0 Member of the microtubule regulatory protein WVD2/WDL family WDL3 stabilizes cortical microtubules and is involved in light induced hypocotyl elongation. WDL3 is ubiquinated by COP1, leading to its degadation in the dark, TPX2 (targeting protein for Xklp2) protein family;(source:Araport11) Ipc14G0012560 AT1G08560.1 syntaxin of plants 111 member of SYP11 syntaxin Gene Family syntaxin of plants 111;(source:Araport11) Ipc14G0012570 AT1G04300.1 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc14G0012580 AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc14G0012590 AT3G23150.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Involved in ethylene perception in Arabidopsis The mRNA is cell-to-cell mobile. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) Ipc14G0012600 AT4G14455.1 Target SNARE coiled-coil domain protein Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in sft1-1 yeast cells; however, it cannot support the deletion of the yeast BET1 gene (bet1Δ). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi. Target SNARE coiled-coil domain protein;(source:Araport11) Ipc14G0012610 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0012620 AT3G23160.1 Protein of unknown function (DUF668) 0 plant/protein (DUF668);(source:Araport11) Ipc14G0012630 AT5G43530.1 Helicase protein with RING/U-box domain 0 Helicase protein with RING/U-box domain-containing protein;(source:Araport11) Ipc14G0012640 AT4G14420.1 HR-like lesion-inducing protein-related 0 HR-like lesion-inducing protein-like protein;(source:Araport11) Ipc14G0012650 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0012660 AT3G61220.1 NAD(P)-binding Rossmann-fold superfamily protein CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc14G0012670 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0012680 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0012690 AT5G59530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0012700 AT1G06620.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0012710 AT5G43420.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc14G0012720 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc14G0012730 AT3G20550.1 SMAD/FHA domain-containing protein Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL. SMAD/FHA domain-containing protein;(source:Araport11) Ipc14G0012740 AT2G04046.1 Defensin-like (DEFL) family protein Encodes a defensin-like (DEFL) family protein. Defensin-like (DEFL) family protein;(source:Araport11) Ipc14G0012750 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc14G0012760 AT4G14380.1 0 0 cotton fiber protein;(source:Araport11) Ipc14G0012770 AT5G24510.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc14G0012780 AT5G24510.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc14G0012790 AT4G14368.3 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc14G0012800 AT3G23280.1 XB3 ortholog 5 in Arabidopsis thaliana Encodes a ubiquitin ligase that is a novel player in ethylene signaling involved in negatively regulating apical hook curvature, with alternative splicing controlling dual targeting to the nuclear and cytoplasmic compartments. hypothetical protein;(source:Araport11) Ipc14G0012810 AT4G16144.1 associated molecule with the SH3 domain of STAM 3 Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis. associated molecule with the SH3 domain of STAM 3;(source:Araport11) Ipc14G0012820 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc14G0012830 AT2G31160.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc14G0012840 AT4G14340.1 casein kinase I Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins. Member of CKL gene family (CKL-C group). casein kinase I;(source:Araport11) Ipc14G0012850 AT2G33470.2 glycolipid transfer protein 1 0 glycolipid transfer protein 1;(source:Araport11) Ipc14G0012860 AT4G14330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Orphan kinesin with processive motility on single microtubules. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0012870 AT3G23400.1 Plastid-lipid associated protein PAP / fibrillin family protein Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance. Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc14G0012880 AT3G23430.1 phosphate 1 Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots. PHO is expressed in developing ovules and plays a role in the transfer of Ph from maternal tissues to filial tissues. phosphate 1;(source:Araport11) Ipc14G0012890 AT5G44060.1 0 0 embryo sac development arrest protein;(source:Araport11) Ipc14G0012900 AT1G73040.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc14G0012910 AT2G33400.1 0 0 FK506-binding nuclear-like protein;(source:Araport11) Ipc14G0012920 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0012930 AT3G50150.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0012940 AT2G42790.1 citrate synthase 3 Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. citrate synthase 3;(source:Araport11) Ipc14G0012950 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc14G0012960 AT3G47200.2 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc14G0012970 AT3G47960.1 Major facilitator superfamily protein Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds. Major facilitator superfamily protein;(source:Araport11) Ipc14G0012980 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0012990 AT1G13150.1 cytochrome P450, family 86, subfamily C, polypeptide 4 member of CYP86C cytochrome P450, family 86, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0013000 AT3G04610.2 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc14G0013010 AT1G04520.1 plasmodesmata-located protein 2 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. plasmodesmata-located protein 2;(source:Araport11) Ipc14G0013020 AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc14G0013030 AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc08G0015160 AT1G29690.1 MAC/Perforin domain-containing protein Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity. MAC/Perforin domain-containing protein;(source:Araport11) Ipc08G0015170 AT3G14840.2 Leucine-rich repeat transmembrane protein kinase Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0015180 AT1G29750.1 receptor-like kinase in flowers 1 Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. receptor-like kinase in flowers 1;(source:Araport11) Ipc12G0001620 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc12G0001610 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc12G0001600 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0001590 AT1G15750.4 Transducin family protein / WD-40 repeat family protein Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc12G0001580 AT1G15740.1 Leucine-rich repeat family protein 0 Leucine-rich repeat family protein;(source:Araport11) Ipc12G0001570 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc12G0001560 AT3G18430.3 0 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc12G0001550 AT5G49290.2 0 0 receptor like protein 56;(source:Araport11) Ipc12G0001540 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0001530 AT1G74190.1 receptor like protein 15 0 receptor like protein 15;(source:Araport11) Ipc12G0001520 AT2G25470.3 0 0 receptor like protein 21;(source:Araport11) Ipc12G0001510 AT2G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0001500 AT1G80450.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc12G0001490 AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0001480 AT1G80030.3 Molecular chaperone Hsp40/DnaJ family protein 0 Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11) Ipc12G0001470 AT1G74360.1 Leucine-rich repeat protein kinase family protein NILR1 encodes a serine/threonine kinase involved in defense response to nematodes. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0001460 AT1G80510.1 Transmembrane amino acid transporter family protein Encodes a close relative of the amino acid transporter ANT1 (AT3G11900). Transmembrane amino acid transporter family protein;(source:Araport11) Ipc12G0001450 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0001440 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc12G0001430 AT1G77290.3 0 0 Glutathione S-transferase family protein;(source:Araport11) Ipc12G0001420 AT1G16710.9 0 Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides. histone acetyltransferase of the CBP family 12;(source:Araport11) Ipc12G0001410 AT5G05190.1 Protein of unknown function (DUF3133) 0 hypothetical protein (DUF3133);(source:Araport11) Ipc12G0001400 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0001390 AT2G31040.1 ATP synthase protein I -related Encodes an integral thylakoid protein that facilitates assembly of the membranous part of the chloroplast ATPase. ATP synthase protein I-like protein;(source:Araport11) Ipc12G0001380 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0001370 AT5G25450.1 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0 Cytochrome bd ubiquinol oxidase, 14kDa subunit;(source:Araport11) Ipc12G0001360 AT4G10020.1 hydroxysteroid dehydrogenase 5 Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5. hydroxysteroid dehydrogenase 5;(source:Araport11) Ipc12G0001350 AT1G16260.3 0 0 Wall-associated kinase family protein;(source:Araport11) Ipc12G0001340 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc12G0001330 #N/A #N/A #N/A #N/A Ipc12G0001320 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc12G0001310 AT1G34120.3 inositol polyphosphate 5-phosphatase I Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2. inositol polyphosphate 5-phosphatase I;(source:Araport11) Ipc12G0001300 AT5G32440.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc12G0001290 AT5G11160.1 adenine phosphoribosyltransferase 5 0 adenine phosphoribosyltransferase 5;(source:Araport11) Ipc12G0001280 AT1G15320.2 0 0 seed dormancy control protein;(source:Araport11) Ipc12G0001270 AT4G32250.3 Protein kinase superfamily protein Encodes a component of the TOC machinery that phosphorylates import receptors, supports pre-protein import, and contributes to efficient chloroplast biogenesis. Protein kinase superfamily protein;(source:Araport11) Ipc12G0001260 AT1G52540.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0001250 AT1G80080.1 Leucine-rich repeat (LRR) family protein Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. Its transcript levels change after inducing MUTE expression in a mute background. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc12G0001240 AT3G15880.3 WUS-interacting protein 2 0 WUS-interacting protein 2;(source:Araport11) Ipc12G0001230 AT3G15880.4 0 0 WUS-interacting protein 2;(source:Araport11) Ipc12G0001220 AT3G15880.2 WUS-interacting protein 2 0 WUS-interacting protein 2;(source:Araport11) Ipc12G0001210 AT1G52460.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0001200 AT3G15880.3 WUS-interacting protein 2 0 WUS-interacting protein 2;(source:Araport11) Ipc12G0001190 AT3G52950.2 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11) Ipc12G0001180 AT1G15330.1 Cystathionine beta-synthase (CBS) protein 0 Cystathionine beta-synthase (CBS) protein;(source:Araport11) Ipc12G0001170 AT3G15820.1 phosphatidic acid phosphatase-related / PAP2-related Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway phosphatidic acid phosphatase-related / PAP2-like protein;(source:Araport11) Ipc12G0001160 AT3G15840.1 post-illumination chlorophyll fluorescence increase Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport. post-illumination chlorophyll fluorescence increase;(source:Araport11) Ipc12G0001150 AT1G80100.1 histidine phosphotransfer protein 6 AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). histidine phosphotransfer protein 6;(source:Araport11) Ipc12G0001140 AT3G15810.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc12G0001130 AT5G20230.1 blue-copper-binding protein Encodes a Al-stress-induced gene. Along with TCF, it promotes lignin biosynthesis in response to cold stress. The mRNA is cell-to-cell mobile. blue-copper-binding protein;(source:Araport11) Ipc12G0001120 AT2G23390.1 0 0 acyl-CoA;(source:Araport11) Ipc12G0001110 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc12G0001100 AT5G20230.1 blue-copper-binding protein Encodes a Al-stress-induced gene. Along with TCF, it promotes lignin biosynthesis in response to cold stress. The mRNA is cell-to-cell mobile. blue-copper-binding protein;(source:Araport11) Ipc12G0001090 #N/A #N/A #N/A #N/A Ipc12G0001080 AT5G58170.1 SHV3-like 5 Encodes a member of the glycerophosphodiester phosphodiesterase like (GDPD-like) family. SHV3-like 5;(source:Araport11) Ipc12G0001070 AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0001060 AT3G15780.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0001050 AT3G22970.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc12G0001040 AT1G79840.5 0 Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER. HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein;(source:Araport11) Ipc12G0001030 AT2G39710.1 Eukaryotic aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0001020 AT1G15360.2 0 Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0001010 AT1G15370.1 SNARE-like superfamily protein TPLATE adaptor complex subunit. SNARE-like superfamily protein;(source:Araport11) Ipc12G0001000 AT5G62200.1 Embryo-specific protein 3, (ATS3) 0 Embryo-specific protein 3, (ATS3);(source:Araport11) Ipc12G0000990 AT1G52630.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc12G0000980 AT1G15385.1 0 0 cotton fiber protein;(source:Araport11) Ipc12G0000970 AT1G80170.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0000960 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc12G0000950 AT1G80180.1 0 Encodes a substrate of the MAPK kinases. Phenotypic analyses of Arabidopsis expressing phosphorylation site mutant forms of At1g80180.1 showed clustered stomata and higher stomatal index in cotyledons expressing the phosphomimetic form of At1g80180.1. hypothetical protein;(source:Araport11) Ipc12G0000940 AT5G59900.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0000930 AT1G30950.1 F-box family protein Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY. F-box family protein;(source:Araport11) Ipc12G0000920 AT5G11280.1 0 0 tail fiber;(source:Araport11) Ipc12G0000910 AT1G15410.2 0 0 aspartate-glutamate racemase family;(source:Araport11) Ipc12G0000900 AT3G19360.2 0 0 Zinc finger (CCCH-type) family protein;(source:Araport11) Ipc12G0000890 AT3G15690.2 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc12G0000880 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc12G0000870 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0000860 AT3G15670.1 Late embryogenesis abundant protein (LEA) family protein 0 Late embryogenesis abundant protein (LEA) family protein;(source:Araport11) Ipc12G0000850 AT1G53540.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc12G0000840 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0000830 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc12G0000820 AT1G52700.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0000810 AT1G80230.1 Rubredoxin-like superfamily protein 0 Rubredoxin-like superfamily protein;(source:Araport11) Ipc12G0000800 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc12G0000790 AT5G40810.1 Cytochrome C1 family 0 Cytochrome C1 family;(source:Araport11) Ipc12G0000780 AT5G11420.1 Protein of unknown function, DUF642 0 transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc12G0000770 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0000760 AT3G15630.1 0 0 plant/protein;(source:Araport11) Ipc12G0000750 AT3G15610.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0000740 AT1G80280.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0000730 AT4G17220.1 microtubule-associated proteins 70-5 Encodes a microtubule associated protein (MAP70-5). Regulates secondary wall patterning in wood cells. Expressed in all tissues. microtubule-associated proteins 70-5;(source:Araport11) Ipc12G0000720 AT1G52760.1 lysophospholipase 2 Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2). lysophospholipase 2;(source:Araport11) Ipc12G0000710 AT2G25610.1 ATPase, F0/V0 complex, subunit C protein 0 ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc12G0000700 AT1G14650.3 0 0 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein;(source:Araport11) Ipc12G0000690 AT5G58980.1 Neutral/alkaline non-lysosomal ceramidase 0 Neutral/alkaline non-lysosomal ceramidase;(source:Araport11) Ipc12G0000680 AT1G80310.1 sulfate transmembrane transporters MOT2 encodes a molybdate transporter which locates to the vacuolar membrane. Loss-of-function (knock out) mutants show elevated molydate levels in rosette leaves and in fully senescent leaves, but decreased MoO4 levels in seeds. Under conditions of molybdate deficiency leaves from mot2::tDNA mutants show strongly reduced nitrate reductase activity. The mot2 gene is slightly expressed in young and mature leaves, but strongly in senescing leaves. This observation points to a function of MOT2 in molybdate transfer from leaves to seeds during plant senescence. sulfate transmembrane transporter;(source:Araport11) Ipc12G0000670 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0000660 AT1G52780.1 Protein of unknown function (DUF2921) 0 PII, uridylyltransferase (DUF2921);(source:Araport11) Ipc12G0000650 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0000640 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0000630 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc12G0000620 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0000610 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc12G0000600 AT1G52800.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0000590 AT5G02400.1 pol-like 2 Encodes a protein with similarity to the POL locus which is a novel protein phosphatase 2C. Ubiquitously expressed. No phenotype observed in homozygous null mutant background. pol-like 2;(source:Araport11) Ipc12G0000580 AT1G52790.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a putative oxidoreductase, 2OG-Fe(II) oxygenase family protein, similar to GS-AOP loci (GI:16118889, GI:16118887, GI:16118891, GI:16118893); contains PF03171 2OG-Fe(II) oxygenase superfamily domain 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0000570 AT5G02400.1 pol-like 2 Encodes a protein with similarity to the POL locus which is a novel protein phosphatase 2C. Ubiquitously expressed. No phenotype observed in homozygous null mutant background. pol-like 2;(source:Araport11) Ipc12G0000560 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0000550 AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc12G0000540 #N/A #N/A #N/A #N/A Ipc12G0000530 AT1G52820.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc12G0000520 AT4G14746.1 0 0 neurogenic locus notch-like protein;(source:Araport11) Ipc12G0000510 AT1G80350.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0000500 AT1G80360.4 0 Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc12G0000490 AT1G80380.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0000480 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc12G0000470 AT5G07020.1 proline-rich family protein Encodes an integral thylakoid membrane protein that interacts with PSII core complexes and contributes to the maintenance of PSII homeostasis upon exposure to photoinhibitory light conditions by participating in the protection and stabilization of PSII under photoinhibitory stress. proline-rich family protein;(source:Araport11) Ipc12G0000460 AT1G45180.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0000450 AT1G64980.2 0 Encodes a putative nucleotide-diphospho-sugar transferase required for pollen germination and tube growth. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc12G0000440 AT4G14550.1 indole-3-acetic acid inducible 14 IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. indole-3-acetic acid inducible 14;(source:Araport11) Ipc12G0000430 AT3G15540.1 indole-3-acetic acid inducible 19 Primary auxin-responsive gene. Involved in the regulation stamen filaments development. indole-3-acetic acid inducible 19;(source:Araport11) Ipc12G0000420 AT1G80410.1 tetratricopeptide repeat (TPR)-containing protein Encodes the catalytic subunit of a N-terminal acetyltransferase. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc12G0000410 AT3G61050.2 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0006210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0006220 AT5G58540.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0006230 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0006240 AT3G19990.1 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc02G0006250 AT2G28290.4 0 Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0006260 AT3G14520.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein Encodes a sesterterpene synthase responsible for the biosynthesis of the tricyclic sesterterpene (+)-thalianatriene with a 11-6-5 fused ring system. Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc02G0006270 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc02G0006290 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc02G0006300 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017730 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0018190 AT2G30120.4 0 0 protein FLC EXPRESSOR;(source:Araport11) Ipc10G0018180 AT5G66055.1 ankyrin repeat protein A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. ankyrin repeat protein;(source:Araport11) Ipc10G0018170 AT1G14580.2 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc10G0018160 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0003690 AT3G53090.2 ubiquitin-protein ligase 7 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. ubiquitin-protein ligase 7;(source:Araport11) Ipc04G0003680 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003670 AT4G27100.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc04G0003660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003650 AT2G36620.1 ribosomal protein L24 RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020). ribosomal protein L24;(source:Araport11) Ipc04G0003640 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003630 AT5G11560.1 catalytics 0 catalytics;(source:Araport11) Ipc04G0003620 AT2G36680.1 Modifier of rudimentary (Mod(r)) protein 0 Modifier of rudimentary (Mod(r)) protein;(source:Araport11) Ipc04G0003610 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0003600 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc04G0003590 AT2G27930.4 0 0 PLATZ transcription factor family protein;(source:Araport11) Ipc04G0003580 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003570 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0003560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0003550 AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc04G0003540 AT3G24100.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc04G0003530 AT1G04880.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain Encodes a ARID-HMG DNA-binding protein that functions in pollen tube growth through the regulation of gene expression by interacting with the transcription factors AGL66 and AGL104. HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc04G0003520 AT4G09020.1 isoamylase 3 Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic α-amylase AMY3 is upregulated. The mRNA is cell-to-cell mobile. isoamylase 3;(source:Araport11) Ipc04G0003510 AT2G38130.2 Acyl-CoA N-acyltransferases (NAT) superfamily protein Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc04G0003500 AT4G13630.2 Protein of unknown function, DUF593 0 zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc04G0003490 AT4G19650.2 0 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc04G0003480 AT3G43240.1 ARID/BRIGHT DNA-binding domain-containing protein 0 ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc04G0003470 AT1G80810.5 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc04G0003460 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0003450 AT1G72320.4 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 23;(source:Araport11) Ipc04G0003440 AT3G24130.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0003430 AT3G24130.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0002520 AT1G57690.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0024780 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0000440 AT1G74040.1 2-isopropylmalate synthase 1 Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500). 2-isopropylmalate synthase 1;(source:Araport11) Ipc02G0000430 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000420 AT5G35360.1 acetyl Co-enzyme a carboxylase biotin carboxylase subunit Encodes biotin carboxylase subunit (CAC2). acetyl Co-enzyme a carboxylase biotin carboxylase subunit;(source:Araport11) Ipc02G0000410 AT5G51760.1 Protein phosphatase 2C family protein Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination. Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0000400 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0000390 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000380 AT1G64370.1 0 0 filaggrin-like protein;(source:Araport11) Ipc02G0000370 AT1G69280.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0000360 AT2G39190.2 Protein kinase superfamily protein member of ATH subfamily Protein kinase superfamily protein;(source:Araport11) Ipc02G0000350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000340 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0000330 AT2G25800.1 Protein of unknown function (DUF810) 0 elongation factor Ts (DUF810);(source:Araport11) Ipc02G0000320 AT2G34190.1 Xanthine/uracil permease family protein 0 Xanthine/uracil permease family protein;(source:Araport11) Ipc02G0000310 AT5G11750.1 Ribosomal protein L19 family protein 0 Ribosomal protein L19 family protein;(source:Araport11) Ipc02G0000300 AT5G08520.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc05G0000510 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000500 AT4G37310.1 cytochrome P450, family 81, subfamily H, polypeptide 1 member of CYP81H cytochrome P450, family 81, subfamily H, polypeptide 1;(source:Araport11) Ipc05G0000490 #N/A #N/A #N/A #N/A Ipc11G0005740 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000470 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0000460 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc05G0000450 AT1G40129.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0000440 AT5G07540.2 glycine-rich protein 16 encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). glycine-rich protein 16;(source:Araport11) Ipc05G0000430 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc05G0000420 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc05G0000410 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc05G0000400 #N/A #N/A #N/A #N/A Ipc05G0000390 AT5G64610.1 histone acetyltransferase of the MYST family 1 Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5. histone acetyltransferase of the MYST family 1;(source:Araport11) Ipc01G0027480 #N/A #N/A #N/A #N/A Ipc01G0027490 AT3G54290.1 0 0 hemerythrin HHE cation-binding domain protein;(source:Araport11) Ipc01G0027500 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc01G0027510 AT1G51520.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0027520 ATCG00040.1 maturase K Encodes a maturase located in the trnK intron in the chloroplast genome. maturase K;(source:Araport11) Ipc01G0027530 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0027540 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc01G0027550 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc01G0027560 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0027570 AT5G02270.1 non-intrinsic ABC protein 9 member of NAP subfamily non-intrinsic ABC protein 9;(source:Araport11) Ipc01G0027580 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0027590 AT1G03260.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc01G0027600 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc01G0027610 AT5G15740.1 O-fucosyltransferase family protein RRT1 is a member of a novel glycosyltransferase famly in plants. It functions as a rhamnosyltransferase, elongating the RG-1 backbone. It functions during seed coat mucilage development. O-fucosyltransferase family protein;(source:Araport11) Ipc01G0027620 AT5G19130.2 GPI transamidase component family protein / Gaa1-like family protein 0 GPI transamidase component family protein / Gaa1-like family protein;(source:Araport11) Ipc01G0027640 AT3G06130.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc01G0027650 AT3G56590.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0015570 AT3G08040.1 MATE efflux family protein Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. MATE efflux family protein;(source:Araport11) Ipc13G0015560 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc13G0015550 AT1G07985.1 Expressed protein 0 Expressed protein;(source:Araport11) Ipc13G0015540 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0015530 AT5G52570.1 beta-carotene hydroxylase 2 Converts β-carotene to zeaxanthin via cryptoxanthin. beta-carotene hydroxylase 2;(source:Araport11) Ipc13G0015520 AT1G04360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0015510 AT5G47690.4 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. binding protein;(source:Araport11) Ipc13G0015500 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc13G0015490 AT1G09400.2 0 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc13G0015480 AT3G08020.1 PHD finger family protein 0 PHD finger family protein;(source:Araport11) Ipc13G0015470 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015460 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0015450 AT5G21080.1 Uncharacterized protein 0 Uncharacterized protein;(source:Araport11) Ipc13G0015440 AT4G04885.1 PCF11P-similar protein 4 Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time. PCF11P-similar protein 4;(source:Araport11) Ipc13G0015430 AT3G23890.2 topoisomerase II Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II;(source:Araport11) Ipc03G0025960 AT2G31800.1 Integrin-linked protein kinase family 0 Integrin-linked protein kinase family;(source:Araport11) Ipc03G0025970 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0025980 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc03G0025990 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0026000 AT1G53570.3 mitogen-activated protein kinase kinase kinase 3 Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens. mitogen-activated protein kinase kinase kinase 3;(source:Araport11) Ipc03G0026010 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0026020 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc03G0026030 AT1G15530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc03G0026040 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0026050 AT5G64040.1 photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Phosphorylation of this protein is dependent on calcium. photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN);(source:Araport11) Ipc03G0026060 AT4G33440.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0026070 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc03G0026080 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0005660 AT1G13270.1 methionine aminopeptidase 1B Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C. methionine aminopeptidase 1B;(source:Araport11) Ipc12G0005670 AT5G27220.3 0 0 Frigida-like protein;(source:Araport11) Ipc12G0005680 #N/A #N/A #N/A #N/A Ipc12G0005690 AT1G48770.3 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc12G0005700 AT3G18480.1 CCAAT-displacement protein alternatively spliced product This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565–689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation. CCAAT-displacement protein alternatively spliced product;(source:Araport11) Ipc12G0005710 AT3G25800.3 0 one of three genes encoding the protein phosphatase 2A regulatory subunit protein phosphatase 2A subunit A2;(source:Araport11) Ipc12G0005720 AT4G18250.1 receptor serine/threonine kinase, putative 0 receptor Serine/Threonine kinase-like protein;(source:Araport11) Ipc12G0005730 AT5G38250.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc12G0005740 AT1G73885.1 0 0 AT-rich interactive domain protein;(source:Araport11) Ipc12G0005750 AT4G35650.1 isocitrate dehydrogenase III Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. In contrast to the broadly expressed other regulatory (IDH-I and IDH-II) and catalytic (IDH-V and IDH-VI) subunits of this enzyme, IDH-III expression appears to be restricted largely to pollen. isocitrate dehydrogenase III;(source:Araport11) Ipc12G0005760 AT1G13360.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0005770 AT1G68120.1 basic pentacysteine 3 0 BASIC PENTACYSTEINE protein;(source:Araport11) Ipc12G0005780 AT2G47470.1 thioredoxin family protein Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. The mRNA is cell-to-cell mobile. thioredoxin family protein;(source:Araport11) Ipc12G0005790 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0005800 AT5G08540.1 0 0 ribosomal RNA small subunit methyltransferase J;(source:Araport11) Ipc12G0005810 AT5G08550.1 GC-rich sequence DNA-binding factor-like protein Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression. GC-rich sequence DNA-binding factor-like protein;(source:Araport11) Ipc06G0015280 AT3G44750.2 histone deacetylase 3 Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. histone deacetylase 3;(source:Araport11) Ipc06G0015270 AT2G33680.6 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0015260 AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative U2 auxiliary factor small subunit. The atU2AF35a protein and its homolog, atU2AF35b, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. U2 snRNP auxiliary factor small subunit;(source:Araport11) Ipc06G0015250 AT4G23660.3 polyprenyltransferase 1 Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50). polyprenyltransferase 1;(source:Araport11) Ipc06G0015240 AT5G22740.1 cellulose synthase-like A02 Encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. CSLA2 synthesizes the backbone of galactoglucomannan in seed coat epidermal cells. Both CSLA2 and MUCI10, which may be part of a protein complex, are critical for mucilage architecture. cellulose synthase-like A02;(source:Araport11) Ipc06G0015230 AT4G00660.2 RNAhelicase-like 8 0 RNAhelicase-like 8;(source:Araport11) Ipc06G0015220 AT2G45810.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc06G0015210 AT2G31650.1 homologue of trithorax Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P. homologue of trithorax;(source:Araport11) Ipc06G0015200 AT1G08230.2 Transmembrane amino acid transporter family protein Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc06G0015190 AT4G25315.2 Expressed protein 0 Expressed protein;(source:Araport11) Ipc06G0015180 AT5G22780.2 0 0 Adaptor protein complex AP-2, alpha subunit;(source:Araport11) Ipc06G0015170 AT1G08200.1 UDP-D-apiose/UDP-D-xylose synthase 2 Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase. UDP-D-apiose/UDP-D-xylose synthase 2;(source:Araport11) Ipc06G0015160 AT5G22830.2 0 Transmembrane magnesium transporter that is essential for chloroplast development and photosynthesis. One of nine family members. magnesium (Mg) transporter 10;(source:Araport11) Ipc06G0015150 AT3G44850.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0015140 AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase;(source:Araport11) Ipc06G0015130 AT5G57840.1 HXXXD-type acyl-transferase family protein encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc06G0015120 AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase;(source:Araport11) Ipc06G0015110 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0015100 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc06G0015090 AT5G22860.3 0 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc06G0015080 AT5G27260.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0015070 AT1G52050.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc06G0015060 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0015050 AT2G17520.1 Endoribonuclease/protein kinase IRE1-like Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. The mRNA is cell-to-cell mobile. Endoribonuclease/protein kinase IRE1-like protein;(source:Araport11) Ipc06G0015030 AT3G55600.2 0 0 Membrane fusion protein Use1;(source:Araport11) Ipc06G0015040 AT1G23570.3 Domain of unknown function (DUF220) 0 hypothetical protein (DUF220);(source:Araport11) Ipc06G0015020 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc06G0015010 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc06G0015000 AT1G08220.1 0 0 ATPase complex subunit;(source:Araport11) Ipc06G0014990 AT4G36980.2 0 0 CLK4-associating serine/arginine-rich protein;(source:Araport11) Ipc06G0014980 AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc06G0014960 AT1G56290.1 CwfJ-like family protein 0 CwfJ-like family protein;(source:Araport11) Ipc06G0014970 AT2G28720.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc06G0014950 AT2G28550.6 0 0 related to AP2.7;(source:Araport11) Ipc06G0014940 AT5G04460.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0014930 AT2G28200.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc06G0014920 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc06G0014910 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc06G0014900 #N/A #N/A #N/A #N/A Ipc06G0014890 AT2G36830.1 gamma tonoplast intrinsic protein Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems. The mRNA is cell-to-cell mobile. gamma tonoplast intrinsic protein;(source:Araport11) Ipc06G0014880 AT5G03340.1 ATPase, AAA-type, CDC48 protein 0 ATPase, AAA-type, CDC48 protein;(source:Araport11) Ipc06G0014870 AT2G28070.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc06G0014860 AT3G45020.4 0 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc06G0014850 AT5G60800.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc06G0014840 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc06G0014830 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc06G0014820 AT2G28105.2 0 0 replication factor-A carboxy-terminal domain protein;(source:Araport11) Ipc06G0014810 AT3G45010.1 serine carboxypeptidase-like 48 0 serine carboxypeptidase-like 48;(source:Araport11) Ipc06G0014800 AT5G22950.1 SNF7 family protein 0 SNF7 family protein;(source:Araport11) Ipc06G0014790 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc06G0014780 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0014770 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc06G0014760 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc06G0014750 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc06G0014740 AT5G60335.3 0 Encodes the mitochondria-localized 3-hydroxyacyl-acyl carrier protein (ACP) dehydratase (mtHD) component of the mitochondrial fatty acid synthase (mtFAS) system. It catalyzes the third of the four iterative reactions that constitute the mtFAS cycle. Additionally, it supports the assembly of lipid A-like molecules and has an unexpected function in maintaining the morphology of chloroplastic starch granules. hydroxyacyl-thioester dehydratase type-like protein;(source:Araport11) Ipc06G0014730 AT2G28000.1 chaperonin-60alpha Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. The mRNA is cell-to-cell mobile. chaperonin-60alpha;(source:Araport11) Ipc06G0014720 AT3G27010.2 0 Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20;(source:Araport11) Ipc06G0014710 AT5G60740.1 ABC transporter family protein 0 ABC transporter family protein;(source:Araport11) Ipc06G0014700 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc06G0014690 AT5G60720.1 Protein of unknown function, DUF547 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc06G0014680 AT2G37025.3 0 0 TRF-like 8;(source:Araport11) Ipc06G0014670 AT2G27990.1 BEL1-like homeodomain 8 Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals. BEL1-like homeodomain 8;(source:Araport11) Ipc06G0014660 AT2G28210.1 alpha carbonic anhydrase 2 0 alpha carbonic anhydrase 2;(source:Araport11) Ipc06G0014650 AT1G08060.3 0 Encodes a transcriptional silencer that is required for proper expression of PRR/NLR immune receptor genes. ATP-dependent helicase family protein;(source:Araport11) Ipc06G0014640 AT2G28250.6 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0014630 AT2G37210.1 lysine decarboxylase family protein Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. lysine decarboxylase family protein;(source:Araport11) Ipc06G0014620 AT5G60700.2 0 0 glycosyltransferase family protein 2;(source:Araport11) Ipc06G0014610 AT2G28310.3 Protein of unknown function (DUF707) 0 trimethylguanosine synthase (DUF707);(source:Araport11) Ipc06G0014600 AT2G28315.1 Nucleotide/sugar transporter family protein UXT1 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and ER. UXT1 functions as a UDP-Xyl transporter. The mRNA is cell-to-cell mobile. Nucleotide/sugar transporter family protein;(source:Araport11) Ipc06G0014590 AT1G08030.2 0 Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. TPST acts in the auxin pathway to maintain postembryonic root stem cell niche by defining the expression of the PLETHORA stem cell transcription factor genes. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques. TPST suppresses ethylene production through the action of PSK (phytosulfokine). tyrosylprotein sulfotransferase;(source:Araport11) Ipc06G0014580 AT1G08010.3 0 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 11;(source:Araport11) Ipc06G0014570 AT5G42300.1 ubiquitin-like protein 5 0 ubiquitin-like protein 5;(source:Araport11) Ipc06G0014560 AT1G07990.1 SIT4 phosphatase-associated family protein 0 SIT4 phosphatase-associated family protein;(source:Araport11) Ipc06G0014550 AT5G60690.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc06G0014540 AT2G28380.1 dsRNA-binding protein 2 Encodes a cytoplasmic dsRNA-binding protein DRB2. A maternally expressed imprinted gene. DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels. dsRNA-binding protein 2;(source:Araport11) Ipc06G0014530 AT2G37190.1 Ribosomal protein L11 family protein 0 Ribosomal protein L11 family protein;(source:Araport11) Ipc06G0014520 AT4G20920.5 0 0 double-stranded RNA-binding domain (DsRBD)-containing protein;(source:Araport11) Ipc06G0014510 AT1G08260.2 0 Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. DNA polymerase epsilon catalytic subunit;(source:Araport11) Ipc06G0014500 AT2G24720.1 glutamate receptor 2.2 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.2;(source:Araport11) Ipc06G0014490 AT3G07520.1 glutamate receptor 1.4 member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis. glutamate receptor 1.4;(source:Araport11) Ipc06G0014480 AT5G48400.2 Glutamate receptor family protein member of Putative ligand-gated ion channel subunit family Glutamate receptor family protein;(source:Araport11) Ipc06G0014470 AT5G48410.1 glutamate receptor 1.3 member of Putative ligand-gated ion channel subunit family glutamate receptor 1.3;(source:Araport11) Ipc06G0014460 AT5G48410.1 glutamate receptor 1.3 member of Putative ligand-gated ion channel subunit family glutamate receptor 1.3;(source:Araport11) Ipc06G0014450 AT2G28410.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0014440 AT2G28430.1 0 0 zinc finger, C3HC4 type family protein;(source:Araport11) Ipc06G0014420 AT5G60600.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase. The mRNA is cell-to-cell mobile. 4-hydroxy-3-methylbut-2-enyl diphosphate synthase;(source:Araport11) Ipc06G0014430 AT3G45230.1 hydroxyproline-rich glycoprotein family protein Encodes the arabinogalactan protein core of plant cell wall proteoglycan that contains arabinogalactan and cell wall matrix glycan pectin and/or xylan domains. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0014410 AT5G60580.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc06G0014400 AT1G07400.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc06G0014390 AT3G53400.1 0 0 peptide upstream protein;(source:Araport11) Ipc06G0014380 AT1G50660.1 0 0 actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11) Ipc06G0014370 AT5G60520.1 Late embryogenesis abundant (LEA) protein-related 0 Late embryogenesis abundant (LEA) protein-like protein;(source:Araport11) Ipc06G0014360 AT2G28470.3 0 putative beta-galactosidase (BGAL8 gene) beta-galactosidase 8;(source:Araport11) Ipc06G0014350 AT2G33530.1 serine carboxypeptidase-like 46 0 serine carboxypeptidase-like 46;(source:Araport11) Ipc06G0014340 AT5G03150.1 C2H2-like zinc finger protein JKD is a nuclear-localized putative transcription factor of the BIRDS/IDD C2H2 zinc finger family. JKD and its homologue BIB, restrict SHR movement to a single layer, the endodermis, and delimit tissue boundaries in the root meristem through a process that involves nuclear retention through protein complex formation. JKD mutation leads to periclinal divisions in the cortex, increased cell numbers in the circumference of the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. This effect is enhanced in jkd bib double mutants where tissue boundaries cannot be maintained due to excessive SHR movement. JKD and BIB restrict CYCIND6 expression to cortex and endodermis stem cells to prevent formative divisions in the ground tissue. JKD physically interacts with cell fate determinants SCR and SHR in a cell type specific manner. Native FRET-FLIM analysis showed higher JKD-SCR complex in the endodermis and predominant JKD-SHR in the QC and cortex/endodermis stem cells. In addition, JKD, SCR and SHR form a ternary complex whose conformation is cell type dependent, conformational changes of this complex differentially regulate SCR and WOX5 expression to specify endodermal cell fate and QC function respectively. Its mRNA is cell-to-cell mobile. C2H2-like zinc finger protein;(source:Araport11) Ipc06G0014330 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc06G0014320 AT5G60410.6 0 Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein;(source:Araport11) Ipc06G0014310 AT2G28490.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc06G0014300 AT1G07910.2 RNAligase Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains, an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo. RNAligase;(source:Araport11) Ipc06G0014290 AT5G02970.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0014280 AT4G21470.1 riboflavin kinase/FMN hydrolase Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. The mRNA is cell-to-cell mobile. riboflavin kinase/FMN hydrolase;(source:Araport11) Ipc06G0014270 AT1G07900.1 LOB domain-containing protein 1 0 LOB domain-containing protein 1;(source:Araport11) Ipc06G0014260 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0014250 #N/A #N/A #N/A #N/A Ipc06G0014240 AT3G45600.1 tetraspanin3 Member of TETRASPANIN family tetraspanin3;(source:Araport11) Ipc06G0014230 AT2G28510.1 Dof-type zinc finger DNA-binding family protein DOF transcription factor with a conserved zinc finger (ZF) DNA-binding domain. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc06G0014220 AT3G07630.3 0 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. arogenate dehydratase 2;(source:Araport11) Ipc06G0014210 AT3G45650.1 nitrate excretion transporter1 Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots. nitrate excretion transporter1;(source:Araport11) Ipc06G0014200 AT3G45640.1 mitogen-activated protein kinase 3 Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro. The mRNA is cell-to-cell mobile. mitogen-activated protein kinase 3;(source:Araport11) Ipc06G0014190 AT5G60170.2 RNA binding (RRM/RBD/RNP motifs) family protein 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc06G0014180 AT2G28550.3 related to AP2.7 0 related to AP2.7;(source:Araport11) Ipc08G0004510 AT1G30460.3 0 Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion. cleavage and polyadenylation specificity factor 30;(source:Araport11) Ipc08G0004500 AT1G30460.1 cleavage and polyadenylation specificity factor 30 Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion. cleavage and polyadenylation specificity factor 30;(source:Araport11) Ipc08G0004490 AT2G32440.2 ent-kaurenoic acid hydroxylase 2 ent-kaurenoic acid hydroxylase (KAO2) ent-kaurenoic acid hydroxylase 2;(source:Araport11) Ipc08G0004480 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0004470 AT2G39480.2 0 0 P-glycoprotein 6;(source:Araport11) Ipc08G0004460 AT2G34680.2 0 isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc08G0004450 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0004440 AT4G21120.1 amino acid transporter 1 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. The mRNA is cell-to-cell mobile. amino acid transporter 1;(source:Araport11) Ipc08G0004430 AT3G18020.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0004420 AT5G45190.1 Cyclin family protein Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV). Cyclin family protein;(source:Araport11) Ipc08G0004410 AT1G30450.3 cation-chloride co-transporter 1 member of Cation-chloride co-transporter family cation-chloride co-transporter 1;(source:Araport11) Ipc08G0004400 AT5G05380.4 0 0 prenylated RAB acceptor 1.B3;(source:Araport11) Ipc08G0004390 AT1G30440.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0004380 AT1G30520.2 0 Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal. acyl-activating enzyme 14;(source:Araport11) Ipc08G0004370 AT2G34730.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc08G0004360 AT5G54730.1 homolog of yeast autophagy 18 (ATG18) F 0 yeast autophagy 18 F-like protein;(source:Araport11) Ipc08G0004350 AT1G30410.3 0 member of MRP subfamily multidrug resistance-associated protein 13;(source:Araport11) Ipc08G0004340 AT1G35220.5 0 0 FAM91 carboxy-terminus protein;(source:Araport11) Ipc08G0004330 AT1G76930.1 extensin 4 Encodes an Arabidopsis extensin gene that belongs to cell-wall hydroxyproline-rich glycoproteins. The cross-link of extensins enforces cell wall strength. Transgenic plants overexpressing this gene show an increase in stem thickness. extensin 4;(source:Araport11) Ipc08G0004320 AT2G34660.2 multidrug resistance-associated protein 2 encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. The mRNA is cell-to-cell mobile. multidrug resistance-associated protein 2;(source:Araport11) Ipc08G0004310 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc08G0004300 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc08G0004290 AT4G05420.1 damaged DNA binding protein 1A Structurally similar to damaged DNA binding proteins. DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis. DDB1a is shown to be RUB-modified. damaged DNA binding protein 1A;(source:Araport11) Ipc08G0004280 #N/A #N/A #N/A #N/A Ipc08G0004270 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0004260 AT2G34650.1 Protein kinase superfamily protein Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID. Protein kinase superfamily protein;(source:Araport11) Ipc08G0004250 AT5G60190.1 Cysteine proteinases superfamily protein Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins. Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0004240 AT3G20280.5 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc08G0004230 AT5G44400.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc06G0000120 AT3G52640.1 Zn-dependent exopeptidases superfamily protein Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments. Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc06G0000110 AT5G16940.2 carbon-sulfur lyases 0 carbon-sulfur lyase;(source:Araport11) Ipc06G0000100 AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc06G0000090 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0000080 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0000070 #N/A #N/A #N/A #N/A Ipc06G0000060 AT5G52580.2 RabGAP/TBC domain-containing protein 0 RabGAP/TBC domain-containing protein;(source:Araport11) Ipc06G0000050 AT3G45830.1 0 0 nuclear factor kappa-B-binding-like protein;(source:Araport11) IpcGene29918 AT2G26290.1 root-specific kinase 1 0 root-specific kinase 1;(source:Araport11) Ipc06G0000040 AT1G48520.1 GLU-ADT subunit B Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836). GLU-ADT subunit B;(source:Araport11) Ipc06G0000020 AT5G62220.1 glycosyltransferase 18 Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2. glycosyltransferase 18;(source:Araport11) Ipc09G0011440 AT1G32070.3 nuclear shuttle interacting Encodes a acetyltransferase (NSI) that is localized in the nucleus and chloroplast. It interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. In the chloroplast NSI functions in the dynamic reorganization thylakoid membrane complexes. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.Mutants have reduced melatonin and anthocyanin levels and do not accumulate the PSI-LHCII state transition complex. nuclear shuttle interacting;(source:Araport11) Ipc09G0011430 AT1G67330.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc09G0011420 AT1G27950.1 glycosylphosphatidylinositol-anchored lipid protein transfer 1 Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen. The mRNA is cell-to-cell mobile. glycosylphosphatidylinositol-anchored lipid protein transfer 1;(source:Araport11) Ipc09G0011410 ATCG00270.1 photosystem II reaction center protein D PSII D2 protein photosystem II reaction center protein D;(source:Araport11) Ipc09G0011400 ATCG00070.1 photosystem II reaction center protein K precursor PSII K protein photosystem II reaction center protein K precursor;(source:Araport11) Ipc09G0011390 AT1G67325.1 Ran BP2/NZF zinc finger-like superfamily protein 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc09G0011380 AT1G27340.1 Galactose oxidase/kelch repeat superfamily protein Encodes a putative F-box protein that is involved in the regulation of leaf morphology. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc09G0011370 AT1G63700.2 0 Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. Protein kinase superfamily protein;(source:Araport11) Ipc09G0011360 #N/A #N/A #N/A #N/A Ipc09G0011350 #N/A #N/A #N/A #N/A Ipc09G0011340 #N/A #N/A #N/A #N/A Ipc09G0011330 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0011320 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0011310 #N/A #N/A #N/A #N/A Ipc09G0011300 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0011290 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0011280 AT3G29390.1 RS2-interacting KH protein Nuclear localized K-homology containing protein that interacts with AS1. RS2-interacting KH protein;(source:Araport11) Ipc09G0011230 AT5G24070.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc09G0011270 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0017580 ATMG00110.1 cytochrome C biogenesis 206 Encodes a mitochondria-encoded cytochrome c biogenesis protein. cytochrome C biogenesis 206;(source:Araport11) Ipc13G0017590 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017600 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017610 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017620 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc13G0017640 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017650 AT1G05160.2 0 Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family. cytochrome P450, family 88, subfamily A, polypeptide 3;(source:Araport11) Ipc13G0017660 AT1G71720.2 0 Encodes a chloroplast localized protein that regulates the translation of Ycf1 by binding to its mRNA. It is involved in the biogenesis of photosynthetic complexes. Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc13G0017670 AT5G49930.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0028980 AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis. NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc13G0017680 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0017690 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017700 AT5G65940.4 0 hydrolyzes beta-hydroxyisobutyryl-CoA beta-hydroxyisobutyryl-CoA hydrolase 1;(source:Araport11) Ipc13G0017710 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017720 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017730 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0017740 AT1G29000.2 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0026290 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0026280 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0026270 AT3G26512.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0026260 AT4G38910.1 basic pentacysteine 5 Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats. basic pentacysteine 5;(source:Araport11) Ipc03G0026250 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc03G0026240 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc03G0026230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0026220 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc03G0026210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0026200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0026180 AT4G29910.1 origin recognition complex protein 5 Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits. origin recognition complex protein 5;(source:Araport11) Ipc03G0026170 AT1G14140.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc03G0026160 AT3G13990.1 Kinase-related protein of unknown function (DUF1296) 0 dentin sialophosphoprotein, putative (DUF1296);(source:Araport11) Ipc03G0026150 AT4G35270.4 0 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc03G0026140 AT5G63980.1 Inositol monophosphatase family protein Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration and increased levels of 3'-phosphoadenosine 5'-phosphate (PAP). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. Its activity is sensitive to the redox state of its environment, decreasing under oxidative conditions and is regulated by dimerization and intra and inter-molecular disulfide bond formation. SAL1 phosphatase-like protein;(source:Araport11) Ipc03G0026130 AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein 0 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein;(source:Araport11) Ipc03G0026120 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0026110 AT5G62760.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0026100 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc03G0026090 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0003900 AT4G38130.2 histone deacetylase 1 Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation. HDA19 acts in a WOX5 mediated pathway to maintain columella stem cell fate by repressing CDF4. histone deacetylase 1;(source:Araport11) Ipc01G0003890 AT1G09815.1 polymerase delta 4 0 polymerase delta 4;(source:Araport11) Ipc01G0003880 AT1G30570.1 hercules receptor kinase 2 Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 2;(source:Araport11) Ipc01G0003870 AT4G13700.1 purple acid phosphatase 23 0 purple acid phosphatase 23;(source:Araport11) Ipc01G0003860 AT3G24220.1 nine-cis-epoxycarotenoid dioxygenase 6 A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition. nine-cis-epoxycarotenoid dioxygenase 6;(source:Araport11) Ipc01G0003850 AT1G04700.2 0 0 PB1 domain-containing protein tyrosine kinase;(source:Araport11) Ipc01G0003840 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0003830 AT3G22980.3 0 0 Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11) Ipc01G0003820 AT1G04790.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0003810 #N/A #N/A #N/A #N/A Ipc01G0003800 AT5G13930.1 Chalcone and stilbene synthase family protein Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. The mRNA is cell-to-cell mobile. Chalcone and stilbene synthase family protein;(source:Araport11) Ipc05G0019910 AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0019920 AT4G23460.1 Adaptin family protein 0 Adaptin family protein;(source:Araport11) Ipc05G0019930 AT5G52980.1 0 0 ER-based factor for assembly of V-ATPase;(source:Araport11) Ipc05G0019940 AT5G41370.1 homolog of xeroderma pigmentosum complementation group B 1 Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies. The mRNA is cell-to-cell mobile. DNA repair helicase XPB1-like protein;(source:Araport11) Ipc05G0019950 AT3G61460.1 brassinosteroid-responsive RING-H2 Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. brassinosteroid-responsive RING-H2;(source:Araport11) Ipc05G0019960 AT1G63850.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc05G0019970 AT5G41410.1 POX (plant homeobox) family protein Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity. POX (plant homeobox) family protein;(source:Araport11) Ipc05G0019980 AT4G32410.1 cellulose synthase 1 Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. cellulose synthase 1;(source:Araport11) Ipc05G0019990 AT3G27530.1 golgin candidate 6 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein. golgin Putative 6;(source:Araport11) Ipc05G0020000 AT5G41460.1 Protein of unknown function (DUF604) 0 transferring glycosyl group transferase (DUF604);(source:Araport11) Ipc05G0020010 AT4G23493.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0020020 AT1G69230.2 SPIRAL1-like2 SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. SPIRAL1-like2;(source:Araport11) Ipc05G0020030 AT4G23500.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0020040 AT1G63910.1 myb domain protein 103 member of MYB3R- and R2R3- type MYB- encoding genes myb domain protein 103;(source:Araport11) Ipc05G0020050 AT1G63930.1 from the Czech 'roh' meaning 'corner' 0 from the Czech roh meaning corner;(source:Araport11) Ipc05G0020060 AT5G52740.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc05G0020070 AT4G11280.1 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family The mRNA is cell-to-cell mobile. 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6;(source:Araport11) Ipc05G0020080 AT3G61510.1 ACC synthase 1 Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity. ACC synthase 1;(source:Araport11) Ipc05G0020090 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0020100 AT4G10930.2 0 0 RING/U-box protein;(source:Araport11) Ipc05G0020110 AT1G63970.1 isoprenoid F Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF isoprenoid F;(source:Araport11) Ipc05G0020120 AT1G63980.1 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc05G0020130 AT5G52830.1 WRKY DNA-binding protein 27 Encodes a WRKY transcription factor WRKY27. Mutation in Arabidopsis WRKY27 results in delayed symptom development in response to the bacterial wilt pathogen Ralstonia solanacearum. WRKY DNA-binding protein 27;(source:Araport11) Ipc05G0020140 AT4G11270.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0020150 AT5G41580.1 RING/U-box superfamily protein Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response. RING/U-box superfamily protein;(source:Araport11) Ipc05G0020160 AT1G64050.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0020170 AT5G41590.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc05G0020180 AT1G64060.1 respiratory burst oxidase protein F Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. respiratory burst oxidase protein F;(source:Araport11) Ipc05G0020190 AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc05G0020200 AT1G64080.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc05G0020210 AT4G11220.1 VIRB2-interacting protein 2 0 VIRB2-interacting protein 2;(source:Araport11) Ipc05G0020220 AT5G60750.1 CAAX amino terminal protease family protein Encodes a chloroplast endoproteinase, SNOWY COTYLEDON4 (SCO4), required for photosynthetic acclimation to higher light intensities. CAAX amino terminal protease family protein;(source:Araport11) Ipc05G0020230 AT5G51410.5 0 0 LUC7 N terminus domain-containing protein;(source:Araport11) Ipc05G0020240 AT4G23650.1 calcium-dependent protein kinase 6 Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family. calcium-dependent protein kinase 6;(source:Araport11) Ipc05G0020250 AT4G23690.1 Disease resistance-responsive (dirigent-like protein) family protein Encodes a homodimeric all-beta dirigent protein in the superfamily of calycins. Dirigent proteins impart stereoselectivity on the phenoxy radical coupling reaction yielding optically active lignans from two molecules of coniferyl alcohol. Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc05G0020260 AT4G08455.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc05G0020270 AT5G41610.3 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 18;(source:Araport11) Ipc05G0020280 AT5G41610.3 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 18;(source:Araport11) Ipc05G0020290 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0020300 AT3G61600.1 POZ/BTB containin G-protein 1 POZ/BTB containing-protein AtPOB1. Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. The mRNA is cell-to-cell mobile. POZ/BTB containin G-protein 1;(source:Araport11) Ipc05G0020310 AT4G23720.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc05G0020320 AT5G41670.4 0 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc05G0020330 AT4G11150.1 vacuolar ATP synthase subunit E1 Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit E1;(source:Araport11) Ipc05G0020340 AT4G11150.1 vacuolar ATP synthase subunit E1 Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit E1;(source:Araport11) Ipc05G0020350 AT1G64200.3 0 0 vacuolar H+-ATPase subunit E isoform 3;(source:Araport11) Ipc05G0020360 AT3G23990.1 heat shock protein 60 mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60;(source:Araport11) Ipc05G0020370 AT2G46270.4 0 encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3??s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. G-box binding factor 3;(source:Araport11) Ipc05G0020380 AT4G23730.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc05G0020390 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0020400 AT4G23750.2 cytokinin response factor 2 encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 2;(source:Araport11) Ipc05G0020410 AT4G11110.1 SPA1-related 2 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. SPA1-related 2;(source:Araport11) Ipc05G0020420 AT4G16045.1 TRAF-like superfamily protein 0 TRAF-like superfamily protein;(source:Araport11) Ipc05G0020430 AT1G64320.2 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc05G0020440 AT5G41790.2 0 CIP1 physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. IN the root the protein is found around epidermal cells. Expression is induced by ABA and osmotic stress but is not regulated by light. Loss of function mutants are also sensitive to osmotic stress and are somewhat ABA insensitive. The mRNA is cell-to-cell mobile. COP1-interactive protein 1;(source:Araport11) Ipc05G0020450 AT4G11090.1 TRICHOME BIREFRINGENCE-LIKE 23 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 23;(source:Araport11) Ipc05G0020460 AT4G11080.1 HMG (high mobility group) box protein Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes. HMG (high mobility group) box protein;(source:Araport11) Ipc05G0020470 AT5G41800.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc05G0020480 AT5G49010.1 DNA replication protein-related Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication. DNA replication protein-like protein;(source:Araport11) Ipc05G0020490 AT1G64355.1 0 0 1-acyl-sn-glycerol-3-phosphate acyltransferase;(source:Araport11) Ipc05G0020500 AT4G23810.1 WRKY family transcription factor member of WRKY Transcription Factor; Group III WRKY family transcription factor;(source:Araport11) Ipc05G0020510 #N/A #N/A #N/A #N/A Ipc05G0020520 AT4G10000.2 Thioredoxin family protein 0 Thioredoxin family protein;(source:Araport11) Ipc05G0020530 AT2G19170.2 0 Encodes a novel subtilisin-like serine protease. subtilisin-like serine protease 3;(source:Araport11) Ipc05G0020540 AT4G23820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0020550 AT5G53160.2 regulatory components of ABA receptor 3 Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile. regulatory components of ABA receptor 3;(source:Araport11) Ipc05G0020560 AT5G41880.1 DNA primases;DNA primases 0 DNA primase POLA3;(source:Araport11) Ipc05G0020570 AT1G64380.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0020580 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0020590 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0020600 AT1G64385.2 0 0 transmembrane protein;(source:Araport11) Ipc05G0020610 AT1G64390.1 glycosyl hydrolase 9C2 0 glycosyl hydrolase 9C2;(source:Araport11) Ipc05G0020620 AT4G23840.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0020630 AT5G62050.1 homolog of yeast oxidase assembly 1 (OXA1) essential factor for protein sorting and assembly into membranes inner membrane OXA1-like protein;(source:Araport11) Ipc05G0020640 AT5G53110.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0020650 AT1G64405.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0020660 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc05G0020670 AT4G23880.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0020680 AT1G61140.3 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related 0 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc05G0020690 AT4G23890.1 0 0 NAD(P)H-quinone oxidoreductase subunit S;(source:Araport11) Ipc05G0020700 AT5G53440.2 0 0 LOW protein: zinc finger CCCH domain protein;(source:Araport11) Ipc05G0020710 AT4G23895.4 0 0 Pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc05G0020720 AT4G23900.1 Nucleoside diphosphate kinase family protein 0 Nucleoside diphosphate kinase family protein;(source:Araport11) Ipc05G0020730 AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 Encodes a protein with UDP-D-glucose 4-epimerase activity. UDP-D-glucose/UDP-D-galactose 4-epimerase 5;(source:Araport11) Ipc05G0020740 AT1G56670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0020750 AT3G62470.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0020760 AT1G56670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc05G0020770 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0020780 AT4G10955.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0020790 AT5G24270.4 0 encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0020800 AT4G10930.1 0 0 RING/U-box protein;(source:Araport11) Ipc05G0020810 AT4G23940.1 FtsH extracellular protease family Encodes FtsHi1. Localizes to the chloroplast envelope membrane. Functions in chloroplast biogenesis and division.Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). FtsH extracellular protease family;(source:Araport11) Ipc05G0020820 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0020830 AT4G10925.5 0 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc05G0020840 AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development. 3-ketoacyl-acyl carrier protein synthase I;(source:Araport11) Ipc05G0020850 AT5G46290.1 3-ketoacyl-acyl carrier protein synthase I Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development. 3-ketoacyl-acyl carrier protein synthase I;(source:Araport11) Ipc05G0020860 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0003370 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc04G0003330 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc07G0000990 AT3G06220.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0003360 AT4G02730.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0026580 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0026570 #N/A #N/A #N/A #N/A Ipc07G0001320 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026560 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc01G0026550 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc01G0026530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026520 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026510 AT3G12350.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0026500 AT4G15630.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc01G0026490 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0026480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026470 AT4G09950.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0026460 #N/A #N/A #N/A #N/A Ipc01G0026450 AT2G07671.1 ATP synthase subunit C family protein 0 ATP synthase subunit C family protein;(source:Araport11) Ipc01G0026440 AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein 0 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein;(source:Araport11) Ipc01G0026430 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc01G0026420 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0026410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0026400 AT4G31400.1 damaged DNA binding;DNA-directed DNA polymerases Encodes CTF7, a homolog of the yeast CTF protein required for the formation of sister chromatid cohesion. Arabidopsis CTF7 is similar to Saccharomyces cerevisiae CTF7 in that it lacks an N-terminal extension, exhibits acetyltransferase activity, and can complement a yeast ctf7 temperature-sensitive mutation. Arabidopsis CTF7 is critical for female gametophyte and embryo development, but not for the establishment of mitotic cohesion during microgametogenesis or during endosperm development. Inactivation of CTF7 results in severe defects in reproduction and vegetative growth. protein CTF7;(source:Araport11) Ipc01G0026390 AT3G54065.1 0 0 LOW protein: ankyrin repeat protein;(source:Araport11) Ipc02G0014680 AT2G39260.1 binding;RNA binding 0 regulator of nonsense transcripts UPF2;(source:Araport11) Ipc02G0014690 AT2G28550.3 related to AP2.7 0 related to AP2.7;(source:Araport11) Ipc02G0014700 AT3G55040.1 glutathione transferase lambda 2 Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro. glutathione transferase lambda 2;(source:Araport11) Ipc02G0014710 AT5G02790.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc02G0014720 AT2G28540.1 RNA binding (RRM/RBD/RNP motifs) family protein 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0014730 AT3G54970.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein 0 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc02G0014740 AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a putative RNA binding protein that is localized in the nucleus and affects ABA-regulated seed germination of Arabidopsis. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0014750 AT1G07900.1 LOB domain-containing protein 1 0 LOB domain-containing protein 1;(source:Araport11) Ipc02G0014760 AT2G35800.1 mitochondrial substrate carrier family protein Encodes a predicted calcium-dependent S-adenosyl methionine carrier. mitochondrial substrate carrier family protein;(source:Araport11) Ipc02G0014770 AT5G03040.3 IQ-domain 2 0 IQ-domain 2;(source:Araport11) Ipc02G0014780 AT4G28610.1 phosphate starvation response 1 Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphate starvation response 1;(source:Araport11) Ipc02G0014790 AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0014800 AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0014810 AT3G04350.1 Plant protein of unknown function (DUF946) 0 vacuolar sorting-associated protein (DUF946);(source:Araport11) Ipc02G0014820 AT5G53530.1 vacuolar protein sorting 26A Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. vacuolar protein sorting 26A;(source:Araport11) Ipc02G0014830 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc02G0014840 AT1G08550.3 0 Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex non-photochemical quenching 1;(source:Araport11) Ipc02G0014850 AT2G42960.5 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0014860 AT2G02230.1 phloem protein 2-B1 0 phloem protein 2-B1;(source:Araport11) Ipc02G0014870 AT2G02230.1 phloem protein 2-B1 0 phloem protein 2-B1;(source:Araport11) Ipc02G0014880 AT3G02810.1 Protein kinase superfamily protein Encodes a receptor-like cytoplasmic kinase localized in the membrane of pollen tube tip regions that controls micropylar pollen tube guidance in Arabidopsis. Protein kinase superfamily protein;(source:Araport11) Ipc02G0014890 AT2G36970.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0014900 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc02G0014910 AT1G31800.1 cytochrome P450, family 97, subfamily A, polypeptide 3 Encodes a protein with β-ring carotenoid hydroxylase activity. The mRNA is cell-to-cell mobile. cytochrome P450, family 97, subfamily A, polypeptide 3;(source:Araport11) Ipc02G0014920 AT5G06430.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc02G0014930 AT1G21720.1 proteasome beta subunit C1 20S proteasome beta subunit PBC1 truncated protein (PBC1) proteasome beta subunit C1;(source:Araport11) Ipc02G0014940 #N/A #N/A #N/A #N/A Ipc02G0014950 AT3G07760.5 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc02G0014960 AT5G64680.2 0 0 mediator-associated protein;(source:Araport11) Ipc02G0014970 AT2G05120.2 Nucleoporin, Nup133/Nup155-like 0 Nucleoporin, Nup133/Nup155-like protein;(source:Araport11) Ipc02G0014980 AT4G16447.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0014990 AT5G65560.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0015000 AT3G01980.4 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0015010 AT5G22130.3 0 member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc02G0015020 AT5G22130.2 mannosyltransferase family protein member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc02G0015030 AT1G74900.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0015040 AT3G07770.3 0 0 HEAT SHOCK PROTEIN 89.1;(source:Araport11) Ipc02G0015050 AT2G05250.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc02G0015060 AT5G48170.1 F-box family protein encodes an F-box protein whose protein sequence is similar to SLY1, which belongs to SCF-SLY1 E3 ligase complex. SCF-SLY1 E3 ligase degrades DELLA proteins that are involved in promoting growth. Overexpression of SLY2 can partially compensate sly1-10 mutant phenotype of dwarfism. F-box family protein;(source:Araport11) Ipc02G0015070 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0015080 AT5G35770.1 Transducin/WD40 repeat-like superfamily protein A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0015090 AT4G16360.1 5'-AMP-activated protein kinase beta-2 subunit protein Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. SNF1-related protein kinase regulatory subunit beta-2;(source:Araport11) Ipc02G0015100 AT2G04480.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0015110 AT5G47650.5 0 Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress. nudix hydrolase homolog 2;(source:Araport11) Ipc02G0015120 AT2G04340.1 0 0 cytoplasmic dynein 2 light intermediate chain;(source:Araport11) Ipc02G0015130 AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0015140 AT3G07660.1 Kinase-related protein of unknown function (DUF1296) 0 flocculation protein (DUF1296);(source:Araport11) Ipc02G0015150 AT3G07660.1 Kinase-related protein of unknown function (DUF1296) 0 flocculation protein (DUF1296);(source:Araport11) Ipc02G0015160 AT3G50800.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0015170 AT2G04240.2 RING/U-box superfamily protein Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism. RING/U-box superfamily protein;(source:Araport11) Ipc02G0015180 AT5G48240.1 0 0 Rrp15p protein;(source:Araport11) Ipc02G0015190 AT3G07650.4 CONSTANS-like 9 This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO. The mRNA is cell-to-cell mobile. CONSTANS-like 9;(source:Araport11) Ipc02G0015200 AT4G26550.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc02G0015210 AT1G06560.1 NOL1/NOP2/sun family protein 0 NOL1/NOP2/sun family protein;(source:Araport11) Ipc02G0015220 AT3G07620.1 Exostosin family protein 0 glycosyltransferase;(source:Araport11) Ipc02G0015230 AT4G12680.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0015240 AT1G06570.1 phytoene desaturation 1 Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants. 4-hydroxyphenylpyruvate dioxygenase;(source:Araport11) Ipc02G0015250 AT4G31300.3 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes 20S proteasome subunit PBA1 (PBA1). PBA1 acts as a plant caspase-3-like enzyme. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc02G0015260 AT5G63510.1 gamma carbonic anhydrase like 1 Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase like 1;(source:Araport11) Ipc02G0015270 AT5G50640.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0 CBS/octicosapeptide/phox/Bemp1 domain protein;(source:Araport11) Ipc02G0015280 AT5G53150.6 0 0 DnaJ heat shock amino-terminal domain protein;(source:Araport11) Ipc02G0015290 AT3G48590.1 nuclear factor Y, subunit C1 Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues. nuclear factor Y, subunit C1;(source:Araport11) Ipc02G0015300 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc02G0015310 AT3G48540.1 Cytidine/deoxycytidylate deaminase family protein 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc02G0015320 AT3G48530.1 SNF1-related protein kinase regulatory subunit gamma 1 0 SNF1-related protein kinase regulatory subunit gamma 1;(source:Araport11) Ipc02G0015330 AT5G63460.1 SAP domain-containing protein Enhances ABA response and plant drought tolerance by modulating the stability and localization of c2-domain ABA-related proteins.LOT1 regulates plant tolerance to drought stress by affecting ABA signaling through regulating the stability and dynamic localization of CAR9 (PMID:31102784). SAP domain-containing protein;(source:Araport11) Ipc02G0015340 AT1G56110.1 homolog of nucleolar protein NOP56 NOP56-like protein NOP56-like pre RNA processing ribonucleoprotein;(source:Araport11) Ipc02G0015350 AT5G63390.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc02G0015360 AT5G60160.1 Zn-dependent exopeptidases superfamily protein Vacuolar aspartyl aminopeptidase which also functions as a molecular chaperone. Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc02G0015370 AT5G63380.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc02G0015380 #N/A #N/A #N/A #N/A Ipc02G0015390 AT5G50360.1 0 0 von willebrand factor A domain protein;(source:Araport11) Ipc02G0015400 AT5G03860.2 malate synthase Encodes a protein with malate synthase activity. malate synthase;(source:Araport11) Ipc02G0015410 AT1G30630.1 Coatomer epsilon subunit 0 Coatomer epsilon subunit;(source:Araport11) Ipc02G0015420 AT5G40780.1 lysine histidine transporter 1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. lysine histidine transporter 1;(source:Araport11) Ipc02G0015430 AT5G50335.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0015440 AT1G24430.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015450 AT1G24430.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015460 AT1G24430.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015470 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015480 AT1G24430.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015490 AT1G76340.1 golgi nucleotide sugar transporter 3 Encodes a nucleotide-sugar transporter. It is is likely the primary Golgi GDP-L-galactose transporter, and provides GDP-L-galactose for RG-II biosynthesis. Knockout lines are lethal. RNAi suppressor lines were used for analysis. GDP-L-Galactose transport was affected. This process was required for pectic RG-II biosynthesis. golgi nucleotide sugar transporter 3;(source:Araport11) Ipc02G0015500 AT5G63310.1 nucleoside diphosphate kinase 2 Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning. nucleoside diphosphate kinase 2;(source:Araport11) Ipc02G0015510 AT1G66350.1 RGA-like 1 Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. RGA-like 1;(source:Araport11) Ipc02G0015520 AT5G50330.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0015530 AT4G24810.2 Protein kinase superfamily protein similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147) Protein kinase superfamily protein;(source:Araport11) Ipc02G0015540 AT3G27160.2 0 GHS1 encodes plastid ribosomal protein S21The mRNA is cell-to-cell mobile. Ribosomal protein S21 family protein;(source:Araport11) Ipc02G0015550 AT5G50320.1 radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1–ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation. radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein;(source:Araport11) Ipc02G0015560 AT1G58400.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0015570 AT5G63290.1 Radical SAM superfamily protein CPO3 (At5g63290) has not been characterized per se, but is a homolog of the CPDH/HEMN (see review by Layer et al, 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al, 2010), but not yet from plants. Radical SAM superfamily protein;(source:Araport11) Ipc02G0015580 AT5G63280.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc02G0015590 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc02G0015600 AT2G04880.2 zinc-dependent activator protein-1 Encodes WRKY1, a member of the WRKY transcription factors in plants involved in disease resistance, abiotic stress, senescence as well as in some developmental processes. WRKY1 is involved in the salicylic acid signaling pathway. The crystal structure of the WRKY1 C-terminal domain revealed a zinc-binding site and identified the DNA-binding residues of WRKY1. The mRNA is cell-to-cell mobile. zinc-dependent activator protein-1;(source:Araport11) Ipc02G0015610 AT2G01470.1 SEC12P-like 2 protein Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. SEC12P-like 2 protein;(source:Araport11) Ipc02G0015620 AT5G48130.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc02G0015630 AT3G07800.1 Thymidine kinase Encodes a thymidine kinase that salvages DNA precursors. Thymidine kinase;(source:Araport11) Ipc02G0015640 AT2G04845.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc02G0015650 AT3G14040.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0015660 AT3G14040.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0015670 AT2G04780.2 FASCICLIN-like arabinoogalactan 7 fasciclin-like arabinogalactan-protein 7 (Fla7) FASCICLIN-like arabinoogalactan 7;(source:Araport11) Ipc02G0015680 AT5G35700.1 fimbrin-like protein 2 Encodes FIMBRIN5, an actin bundling factor required for pollen germination and pollen tube growth. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. fimbrin-like protein 2;(source:Araport11) Ipc02G0015690 AT2G04740.1 ankyrin repeat family protein 0 ankyrin repeat family protein;(source:Araport11) Ipc02G0015700 AT3G07890.5 0 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc02G0015710 AT2G32950.1 Transducin/WD40 repeat-like superfamily protein Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0015720 AT2G32940.1 Argonaute family protein Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing. Argonaute family protein;(source:Araport11) Ipc02G0015730 AT5G44210.1 erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9;(source:Araport11) Ipc02G0015740 AT3G09220.1 laccase 7 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 7;(source:Araport11) Ipc02G0015750 AT1G04980.1 PDI-like 2-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. PDI-like 2-2;(source:Araport11) Ipc02G0015760 AT2G04550.1 indole-3-butyric acid response 5 Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins. It plays a role in male gametophyte development, auxin and TCP growth regulatory pathways. indole-3-butyric acid response 5;(source:Araport11) Ipc02G0015770 AT4G22250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0015780 AT2G05810.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0015790 AT5G55160.1 small ubiquitin-like modifier 2 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. small ubiquitin-like modifier 2;(source:Araport11) Ipc02G0015800 AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0015810 AT4G04210.1 plant UBX domain containing protein 4 Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) plant UBX domain containing protein 4;(source:Araport11) Ipc02G0015820 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc02G0015830 AT5G10710.1 0 0 centromere protein O;(source:Araport11) Ipc02G0015840 AT3G14330.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of psbE. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0015850 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0015860 AT2G46970.1 phytochrome interacting factor 3-like 1 encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. phytochrome interacting factor 3-like 1;(source:Araport11) Ipc02G0015870 AT1G05700.1 Leucine-rich repeat transmembrane protein kinase protein 0 Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11) Ipc02G0015880 AT2G32580.1 Protein of unknown function (DUF1068) 0 transmembrane protein, putative (DUF1068);(source:Araport11) Ipc02G0015890 AT2G04560.1 transferases, transferring glycosyl groups 0 transferases, transferring glycosyl groups;(source:Araport11) Ipc02G0015900 AT3G20800.1 Cell differentiation, Rcd1-like protein 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc02G0015910 AT4G04450.1 WRKY family transcription factor member of WRKY Transcription Factor; Group II-b WRKY family transcription factor;(source:Araport11) Ipc02G0015920 AT5G55090.1 mitogen-activated protein kinase kinase kinase 15 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15;(source:Araport11) Ipc02G0015930 AT5G55090.1 mitogen-activated protein kinase kinase kinase 15 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15;(source:Araport11) Ipc02G0015940 AT5G42570.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc02G0015950 AT4G22010.1 SKU5 similar 4 0 SKU5 similar 4;(source:Araport11) Ipc02G0015960 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc02G0015970 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0015980 AT1G61370.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0015990 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0016000 AT1G11790.1 arogenate dehydratase 1 Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. arogenate dehydratase 1;(source:Araport11) Ipc02G0016010 #N/A #N/A #N/A #N/A Ipc02G0016020 AT1G05170.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc02G0016030 AT5G54970.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0016040 AT2G05710.1 aconitase 3 Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. aconitase 3;(source:Araport11) Ipc02G0016050 AT2G32400.1 glutamate receptor 5 Glr5 glutamate receptor 5;(source:Araport11) Ipc02G0016060 AT1G05200.6 0 Encodes a putative glutamate receptor GLR3 with dual localization in plastid and plasma membrane. glutamate receptor 3.4;(source:Araport11) Ipc02G0016070 AT3G21700.3 Ras-related small GTP-binding family protein Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip. Ras-related small GTP-binding family protein;(source:Araport11) Ipc02G0016080 AT3G21710.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0016090 AT2G32350.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc02G0016100 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc02G0016110 AT4G15248.1 B-box type zinc finger family protein 0 B-box type zinc finger family protein;(source:Araport11) Ipc02G0016120 AT4G15240.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc02G0016130 AT1G05280.1 Protein of unknown function (DUF604) 0 ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604);(source:Araport11) Ipc02G0016140 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc02G0016150 AT4G00390.1 DNA-binding storekeeper protein-related transcriptional regulator 0 DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc02G0016160 AT1G26850.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0016170 AT3G49950.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc02G0016180 AT4G03210.1 xyloglucan endotransglucosylase/hydrolase 9 encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers. xyloglucan endotransglucosylase/hydrolase 9;(source:Araport11) Ipc02G0016190 AT3G09280.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0016200 AT2G16030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0016210 AT5G54510.1 Auxin-responsive GH3 family protein Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3). Auxin-responsive GH3 family protein;(source:Araport11) Ipc02G0016220 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0016230 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0016240 AT4G03230.4 0 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc02G0016250 AT4G03230.3 0 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc02G0016260 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc02G0016270 AT4G03230.8 0 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc02G0016280 AT4G27310.1 B-box type zinc finger family protein Encodes a B-box domain protein that negatively regulates photomorphogenic development by interfering with the binding of the transcription factor HY5 to target gene promoters. Degradation of BBX28 in darkness is dependent on COP1 and occurs via the 26S proteasome pathway. BBX28 acts as a key factor in the COP1-HY5 regulatory hub by maintaining proper HY5 activity to ensure normal photomorphogenic development in plants. B-box type zinc finger family protein;(source:Araport11) Ipc02G0016290 AT4G03240.1 frataxin homolog Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress. frataxin-like protein;(source:Araport11) Ipc02G0016300 AT4G03260.4 0 MASP1 overexpression promotes growth during drought and promotes microtubule stability and recovery after stress as well as microtubule bundling.MASP1 growth promotion and microtubule stabilization activities are dependent upon serine 670 phosphorylation. MASP1 binds microtubules;this activity is not affected by MASP1 phosphorylation status.MASP1 protein levels are induced by drought post-transcriptionally. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc02G0016310 AT5G04670.2 0 Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing. Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc02G0016320 #N/A #N/A #N/A #N/A Ipc02G0016330 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc02G0016340 AT4G28110.1 myb domain protein 41 Member of the R2R3 factor gene family. Expression is induced in response to desiccation, ABA and salt treatment. Overexpression of Myb41 results in abnormal cuticle development and decreased cell expansion. myb domain protein 41;(source:Araport11) Ipc02G0016350 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc02G0016360 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc02G0016370 AT5G45500.3 0 0 RNI-like superfamily protein;(source:Araport11) Ipc02G0016380 AT4G21440.1 MYB-like 102 Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family. MYB-like 102;(source:Araport11) Ipc02G0016390 AT4G28240.1 Wound-responsive family protein Member of the wound-induced polypeptide (WIP) family. Positively regulates plant resistance against Pst DC3000 by enhancing PTI responses. Wound-responsive family protein;(source:Araport11) Ipc02G0016400 AT4G21450.1 PapD-like superfamily protein 0 PapD-like superfamily protein;(source:Araport11) Ipc02G0016410 AT1G03940.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016420 AT3G29635.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016430 AT3G29635.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016440 AT1G03940.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016450 AT1G03940.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016460 AT1G03940.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0016470 AT4G28230.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0016480 AT4G28220.1 NAD(P)H dehydrogenase B1 0 NAD(P)H dehydrogenase B1;(source:Araport11) Ipc02G0016490 AT1G03510.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0016500 AT4G38360.2 Protein of unknown function (DUF300) LAZ1 is a DUF300 domain protein that appears to function in vacuolar transport effecting brassinosteroid and programmed cell dealth signaling pathways. organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc02G0016510 AT5G06710.1 homeobox from Arabidopsis thaliana Homeobox-leucine zipper protein. homeobox leucine zipper protein;(source:Araport11) Ipc02G0016520 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0016530 AT2G20820.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0016540 AT1G64330.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc02G0016550 AT4G28190.1 Developmental regulator, ULTRAPETALA Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.ULT1 acts as an anti-repressor that counteracts EMF1 action through modulation of histone marks on target genes. Developmental regulator, ULTRAPETALA;(source:Araport11) Ipc02G0016560 AT4G03380.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0016570 AT1G03520.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc02G0016580 AT1G52855.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0016590 AT1G61250.1 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc02G0016600 AT4G03390.2 0 0 STRUBBELIG-receptor family 3;(source:Araport11) Ipc02G0016610 AT2G20860.3 0 LIP1,Lipoic acid synthase, lipoic acid synthase 1;(source:Araport11) Ipc02G0016620 AT1G52870.2 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc02G0016630 AT4G03415.3 0 Encodes a myristoylated 2C-type protein phosphatase that interacts with AGB1 and is localized to the plasma membrane. Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0016640 AT1G03600.1 photosystem II family protein PSB27 is a chloroplast lumen localized protein that is involved in adaptation to changes in light intensity. photosystem II family protein;(source:Araport11) Ipc02G0016650 AT4G24520.1 P450 reductase 1 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1;(source:Araport11) Ipc02G0016660 AT4G03420.1 Protein of unknown function (DUF789) 0 hypothetical protein (DUF789);(source:Araport11) Ipc02G0016670 AT1G26799.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc02G0016680 AT4G04980.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0016690 AT2G14830.1 Regulator of Vps4 activity in the MVB pathway protein 0 Ist1p;(source:Araport11) Ipc02G0016700 AT4G28140.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc02G0016710 AT2G20780.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0016720 AT2G20740.1 Tetraspanin family protein 0 Tetraspanin family protein;(source:Araport11) Ipc02G0016730 AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0016740 AT4G28290.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0016750 AT2G20690.1 lumazine-binding family protein A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. The mRNA is cell-to-cell mobile. lumazine-binding family protein;(source:Araport11) Ipc02G0016760 AT4G28300.1 Protein of unknown function (DUF1421) Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall. The mRNA is cell-to-cell mobile. formin-like protein (DUF1421);(source:Araport11) Ipc02G0016770 AT4G03550.1 glucan synthase-like 5 Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense. The mRNA is cell-to-cell mobile. glucan synthase-like 5;(source:Araport11) Ipc02G0016780 AT4G03560.1 two-pore channel 1 Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress. two-pore channel 1;(source:Araport11) Ipc02G0016790 AT2G20680.1 Glycosyl hydrolase superfamily protein Encodes a mannanase belonging to clade 1 of the GH5 7 phylogenetic tree that exhibits high substrate affinity and catalytic efficiency on mannan substrates with main chains containing both glucose and mannose units such as konjac glucomannan and spruce galactoglucomannan. It is likely a glycoprotein. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc02G0016800 AT1G53050.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0016810 AT5G40080.1 Mitochondrial ribosomal protein L27 0 Mitochondrial ribosomal protein L27;(source:Araport11) Ipc02G0016820 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0016830 AT4G22930.2 0 Encodes dihydroorotase (PYR4). pyrimidin 4;(source:Araport11) Ipc02G0016840 AT3G49190.1 O-acyltransferase (WSD1-like) family protein 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc02G0016850 AT5G08280.1 hydroxymethylbilane synthase Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants. It has been shown to interact with the PPR protein AtECB2 for chloroplast RNA editing. hydroxymethylbilane synthase;(source:Araport11) Ipc02G0016860 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc02G0016870 AT4G15800.1 ralf-like 33 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile. ralf-like 33;(source:Araport11) Ipc02G0016880 AT4G32490.1 early nodulin-like protein 4 0 early nodulin-like protein 4;(source:Araport11) Ipc02G0016890 AT1G03760.1 Prefoldin chaperone subunit family protein 0 Prefoldin chaperone subunit family protein;(source:Araport11) Ipc02G0016900 AT2G20650.2 RING/U-box superfamily protein Encodes a putative RING E3 ubiquitin ligase based on its 84.5% amino acid identity with FLY1, which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology.The mucilage of fly2 mutant seeds hydrated in water resembles wild type seed mucilage. RING/U-box superfamily protein;(source:Araport11) Ipc02G0016910 AT4G28380.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc02G0016920 AT2G20635.1 ATP binding;protein kinases;protein serine/threonine kinases 0 protein kinase and Mad3-BUB1-I domain-containing protein;(source:Araport11) Ipc02G0016930 AT1G53160.2 squamosa promoter binding protein-like 4 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. squamosa promoter binding protein-like 4;(source:Araport11) Ipc02G0016940 AT5G44280.3 0 Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression. RING 1A;(source:Araport11) Ipc02G0016950 AT5G44265.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0016960 AT1G05450.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0016970 AT5G44265.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0016980 AT1G03790.1 Zinc finger C-x8-C-x5-C-x3-H type family protein Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180). Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc02G0016990 AT5G44210.1 erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9;(source:Araport11) Ipc02G0017000 AT2G20590.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc02G0017010 AT1G28395.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0017020 AT4G38062.1 0 0 basic helix loop helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc02G0017030 AT2G20580.1 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile. 26S proteasome regulatory subunit S2 1A;(source:Araport11) Ipc02G0017040 AT2G20580.1 26S proteasome regulatory subunit S2 1A encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile. 26S proteasome regulatory subunit S2 1A;(source:Araport11) Ipc02G0017050 AT2G20560.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc02G0017060 AT4G28485.2 0 The structure of this gene is mis-annotated in TAIR10. Please refer to PMID:20712629 and the Comment field on the TAIR locus page for revised annotation. transmembrane protein, putative (DUF679 domain membrane protein 7);(source:Araport11) Ipc02G0017070 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc02G0017080 AT2G20560.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc02G0017090 AT1G28440.1 HAESA-like 1 0 HAESA-like 1;(source:Araport11) Ipc02G0017100 AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc02G0017110 AT1G28480.1 Thioredoxin superfamily protein Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk. It has also been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc02G0017120 AT1G03860.3 prohibitin 2 prohibitin 2 prohibitin 2;(source:Araport11) Ipc02G0017130 AT3G54680.1 proteophosphoglycan-related 0 proteophosphoglycan-like protein;(source:Araport11) Ipc02G0017140 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc02G0017150 AT2G42390.1 protein kinase C substrate, heavy chain-related 0 kinase C substrate, heavy chain-like protein;(source:Araport11) Ipc02G0017160 AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0017170 AT1G06260.1 Cysteine proteinases superfamily protein Cysteine peptidase,activity detected in leaf and flower. Cysteine proteinases superfamily protein;(source:Araport11) Ipc02G0017180 AT3G58120.1 Basic-leucine zipper (bZIP) transcription factor family protein Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc02G0017190 AT3G58110.2 0 0 hypothetical protein;(source:Araport11) Ipc02G0017200 AT3G58100.1 plasmodesmata callose-binding protein 5 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 5;(source:Araport11) Ipc02G0017210 AT1G53230.2 0 Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3;(source:Araport11) Ipc02G0017220 AT3G49800.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc02G0017230 AT1G06230.4 0 This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4;(source:Araport11) Ipc02G0017240 AT1G06240.1 Protein of unknown function DUF455 0 diiron containing four-helix bundle family ferritin protein, putative (Protein of unknown function DUF455);(source:Araport11) Ipc02G0017250 AT5G67150.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0017260 AT2G31130.6 0 0 hypothetical protein;(source:Araport11) Ipc02G0017270 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0017280 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc02G0017290 AT2G30900.1 TRICHOME BIREFRINGENCE-LIKE 43 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 43;(source:Araport11) Ipc02G0017300 AT1G06460.1 alpha-crystallin domain 32.1 ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins. alpha-crystallin domain 32.1;(source:Araport11) Ipc02G0017310 AT5G61960.9 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices. MEI2-like protein 1;(source:Araport11) Ipc02G0017320 AT4G18880.1 heat shock transcription factor A4A Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses. heat shock transcription factor A4A;(source:Araport11) Ipc02G0017330 AT1G03910.1 0 Encodes the Arabidopsis homolog of a conserved eukaryotic protein without known functional domains. The protein that localizes to nuclear speckles and colocalizes with known splicing proteins. cactus-binding carboxy-terminal, cactin;(source:Araport11) Ipc02G0017340 AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0017350 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc02G0017360 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc02G0017370 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc02G0017380 AT3G14660.2 0 putative cytochrome P450The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 13;(source:Araport11) Ipc02G0017390 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc02G0017400 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc02G0017410 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc02G0017420 AT3G16610.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc02G0017430 AT3G58720.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0017440 AT2G30950.4 0 Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane. FtsH extracellular protease family;(source:Araport11) Ipc02G0017450 AT1G06410.3 0 Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants. trehalose-phosphatase/synthase 7;(source:Araport11) Ipc02G0017460 AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity.It is required for the suppression of defense responses in absence of pathogen infection or upon abscisic acid treatment. Loss-of-function mutants display enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum. Its expression is repressed by pathogen infection and biological elicitors and is induced abscisic acid.Expression is strongly repressed by elicitors and fungal infection, and is induced by the hormone abscisic acid (ABA). Insertional mutants show increased expression of PHYTOALEXIN-DEFICIENT 3 (PAD3), enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum infection and reduced physiological responses to ABA, suggesting that LYK3 is important for the cross-talk between signaling pathways activated by ABA and pathogens (PMID:24639336). protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc02G0017470 AT3G60070.6 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0017480 AT2G42740.1 ribosomal protein large subunit 16A encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. ribosomal protein large subunit 16A;(source:Araport11) Ipc02G0017490 AT3G58690.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0017500 AT2G42700.1 0 Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus Sec1 domain, involved in the development of vegetative organs. Required for proper maturation of seed storage proteins. vesicle docking protein;(source:Araport11) Ipc02G0017510 AT2G42670.2 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc02G0017520 AT2G30990.5 0 0 arginine N-methyltransferase, putative (DUF688);(source:Araport11) Ipc02G0017530 AT3G58640.2 Mitogen activated protein kinase kinase kinase-related 0 Mitogen activated protein kinase kinase kinase-like protein;(source:Araport11) Ipc02G0017540 AT5G12360.2 0 Encodes a protein that protects meiotic centromere cohesion. hypothetical protein;(source:Araport11) Ipc02G0017550 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc02G0017560 AT1G53310.3 phosphoenolpyruvate carboxylase 1 Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.Plays an important role in carbon and nitrogen metabolism. phosphoenolpyruvate carboxylase 1;(source:Araport11) Ipc02G0017570 #N/A #N/A #N/A #N/A Ipc02G0017580 AT2G42590.3 general regulatory factor 9 14-3-3 gene. Binds calcium and displays induced structural changes. general regulatory factor 9;(source:Araport11) Ipc02G0017590 AT3G44350.2 NAC domain containing protein 61 0 NAC domain containing protein 61;(source:Araport11) Ipc02G0017600 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc02G0017610 AT3G58760.1 Integrin-linked protein kinase family 0 Integrin-linked protein kinase family;(source:Araport11) Ipc02G0017620 AT2G42820.1 HVA22-like protein F 0 HVA22-like protein F;(source:Araport11) Ipc02G0017630 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0017640 AT3G58800.1 0 0 secretion-regulating guanine nucleotide exchange factor;(source:Araport11) Ipc02G0017650 AT1G29400.3 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like protein 5;(source:Araport11) Ipc02G0017660 AT2G42910.1 Phosphoribosyltransferase family protein 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc02G0017670 AT1G78400.1 Pectin lyase-like superfamily protein PGX2 is a cell wall protein that codes for a polygalacturonase. Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0017680 AT4G18170.1 WRKY DNA-binding protein 28 Member of WRKY Transcription Factor; Group II-c. Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3. In the ovule, it is expressed in hypodermal somatic cells and appears to play a role in supression of megasporocyte cell fate. WRKY DNA-binding protein 28;(source:Araport11) Ipc02G0017690 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0017700 AT3G59110.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0017710 AT1G67930.1 Golgi transport complex protein-related 0 Golgi transport complex protein-like protein;(source:Araport11) Ipc02G0017720 AT2G30890.1 Cytochrome b561/ferric reductase transmembrane protein family 0 Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc02G0017730 AT5G48290.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc02G0017740 AT3G20180.3 0 0 Copper transport protein family;(source:Araport11) Ipc02G0017750 AT3G07600.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc02G0017760 AT4G17170.1 RAB GTPase homolog B1C member of RAB gene family RAB GTPase homolog B1C;(source:Araport11) Ipc02G0017770 AT5G48300.1 ADP glucose pyrophosphorylase 1 Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested. The mRNA is cell-to-cell mobile. ADP glucose pyrophosphorylase 1;(source:Araport11) Ipc02G0017780 AT5G03780.1 TRF-like 10 Encodes a protein whose sequence is similar to human telomere proteins. This belongs to TRFL family 2, which do not show DNA binding in vitro. TRF-like 10;(source:Araport11) Ipc02G0017790 AT4G12650.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc02G0017800 AT1G17220.1 Translation initiation factor 2, small GTP-binding protein Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. The mRNA is cell-to-cell mobile. Translation initiation factor 2, small GTP-binding protein;(source:Araport11) Ipc02G0017810 AT1G72280.1 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum oxidoreductin endoplasmic reticulum oxidoreductins 1;(source:Araport11) Ipc02G0017820 AT3G14370.1 Protein kinase superfamily protein The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. Protein kinase superfamily protein;(source:Araport11) Ipc02G0017830 AT1G17230.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc02G0017840 AT1G56200.1 embryo defective 1303 Encodes a chloroplast localized protein that is essential for chloroplast development. embryo defective 1303;(source:Araport11) Ipc02G0017850 AT1G17180.1 glutathione S-transferase TAU 25 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Detoxification of the environmental pollutant 2,4,6-trinitrotoluene. Arabidopsis plant over-expressing At1g17180 were more resistant to TNT, removed more TNT from sterile and soil-based media, and had reduced levels of glutathione when grown in the presence of TNT. glutathione S-transferase TAU 25;(source:Araport11) Ipc02G0017860 AT1G17180.1 glutathione S-transferase TAU 25 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Detoxification of the environmental pollutant 2,4,6-trinitrotoluene. Arabidopsis plant over-expressing At1g17180 were more resistant to TNT, removed more TNT from sterile and soil-based media, and had reduced levels of glutathione when grown in the presence of TNT. glutathione S-transferase TAU 25;(source:Araport11) Ipc02G0017870 AT3G14420.2 Aldolase-type TIM barrel family protein Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. The mRNA is cell-to-cell mobile. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc02G0017880 AT1G16570.1 UDP-Glycosyltransferase superfamily protein Encodes a encodes a putative UDP-glycosyltransferase superfamily protein belonging to the glycosyltransferase (GT) family 33 that is localized to the endoplasmic reticulum. Loss of function alleles are male sterile, with pollen tubes bursting after germination. Loss of function also causes increased callose deposition in the female gametophyte, pollen tube overgrowth and reduced transmission. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0017890 AT3G14440.1 nine-cis-epoxycarotenoid dioxygenase 3 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane. nine-cis-epoxycarotenoid dioxygenase 3;(source:Araport11) Ipc02G0017900 AT1G53650.2 CTC-interacting domain 8 RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins. CTC-interacting domain 8;(source:Araport11) Ipc02G0017910 AT1G78410.2 0 0 VQ motif-containing protein;(source:Araport11) Ipc02G0017920 AT1G78420.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0017930 AT2G30270.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc02G0017940 #N/A #N/A #N/A #N/A Ipc02G0017950 AT3G45140.2 0 Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of LOX2.The mRNA is cell-to-cell mobile. lipoxygenase 2;(source:Araport11) Ipc02G0017960 AT3G14230.3 related to AP2 2 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. related to AP2 2;(source:Araport11) Ipc02G0017970 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0017980 AT1G62950.1 leucine-rich repeat transmembrane protein kinase family protein 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc02G0017990 AT1G78430.1 ROP interactive partner 2 Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 2;(source:Araport11) Ipc02G0018000 AT1G17120.1 cationic amino acid transporter 8 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. cationic amino acid transporter 8;(source:Araport11) Ipc02G0018010 AT1G17110.3 0 Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. ubiquitin-specific protease 15;(source:Araport11) Ipc02G0018020 #N/A #N/A #N/A #N/A Ipc02G0018030 AT3G17480.1 F-box and associated interaction domains-containing protein 0 F-box/associated interaction domain protein;(source:Araport11) Ipc02G0018040 AT1G53590.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0018050 AT1G53560.1 Ribosomal protein L18ae family 0 Ribosomal protein L18ae family;(source:Araport11) Ipc02G0018060 AT1G53560.1 Ribosomal protein L18ae family 0 Ribosomal protein L18ae family;(source:Araport11) Ipc02G0018070 AT1G17050.1 solanesyl diphosphate synthase 2 Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids. solanesyl diphosphate synthase 2;(source:Araport11) Ipc02G0018080 AT3G14720.1 MAP kinase 19 member of MAP Kinase The mRNA is cell-to-cell mobile. MAP kinase 19;(source:Araport11) Ipc02G0018090 AT3G14760.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0018100 AT1G78570.1 rhamnose biosynthesis 1 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. rhamnose biosynthesis 1;(source:Araport11) Ipc02G0018110 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc02G0018120 AT1G78590.1 NAD(H) kinase 3 Encodes a NADH kinase which can synthesize NADPH from NADH; also utilizes NAD+ as substrate although NADH is the preferred substrate. NAD(H) kinase 3;(source:Araport11) Ipc02G0018130 AT1G53490.1 RING/U-box superfamily protein Encodes HEI10, a RING finger-containing protein. HEI10 belongs to a group of proteins well conserved among species known as ZMM. Required for class I crossover formation. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc02G0018140 AT1G78600.1 light-regulated zinc finger protein 1 0 light-regulated zinc finger protein 1;(source:Araport11) Ipc02G0018150 AT1G33260.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0018160 AT1G78620.1 Protein of unknown function DUF92, transmembrane 0 integral membrane protein (Protein of unknown function DUF92, transmembrane);(source:Araport11) Ipc02G0018170 AT3G48880.3 0 Encodes an F-box protein, SNIPER4, that regulates the turnover of MUSE13 and MUSE14, redundant TRAF proteins serving as adaptors in the SCFCRP1 complex to facilitate the turnover of nucleotide-binding domain and leucine-rich repeats (NLR) immune receptors. RNI-like superfamily protein;(source:Araport11) Ipc02G0018180 AT5G03160.1 homolog of mamallian P58IPK J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. DnaJ P58IPK-like protein;(source:Araport11) Ipc02G0018190 AT3G53380.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0018200 AT3G53370.1 S1FA-like DNA-binding protein 0 S1FA-like DNA-binding protein;(source:Araport11) Ipc02G0018210 AT2G37110.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc02G0018220 AT5G03120.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0018230 AT3G09730.3 0 0 POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND protein;(source:Araport11) Ipc02G0018240 AT3G17790.1 purple acid phosphatase 17 Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. purple acid phosphatase 17;(source:Araport11) Ipc02G0018250 AT5G03070.1 importin alpha isoform 9 Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 9;(source:Araport11) Ipc02G0018260 AT4G20010.2 plastid transcriptionally active 9 Organellar Single-stranded DNA Binding protein. Decreases MMEJ on long ssDNA templates. plastid transcriptionally active 9;(source:Araport11) Ipc02G0018270 AT5G03040.3 IQ-domain 2 0 IQ-domain 2;(source:Araport11) Ipc02G0018280 AT3G53360.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0018290 AT2G35795.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0018300 AT2G43190.3 ribonuclease P family protein Encodes a protein involved in rRNA but not tRNA maturation. ribonuclease P family protein;(source:Araport11) Ipc02G0018310 AT2G29660.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc02G0018320 AT2G37080.2 0 Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). ROP interactive partner 3;(source:Araport11) Ipc02G0018330 AT5G02960.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc02G0018340 AT5G02950.2 0 0 Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc02G0018350 AT2G28550.3 related to AP2.7 0 related to AP2.7;(source:Araport11) Ipc06G0000380 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000370 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000360 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0000350 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0003050 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003020 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003030 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003040 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003010 #N/A #N/A #N/A #N/A Ipc08G0003000 AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0002990 AT5G46420.1 16S rRNA processing protein RimM family 0 16S rRNA processing protein RimM family;(source:Araport11) Ipc08G0002980 AT3G58460.1 RHOMBOID-like protein 15 0 RHOMBOID-like protein 15;(source:Araport11) Ipc08G0002970 AT4G39952.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0002960 AT2G16810.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0002950 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002940 AT4G25310.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0002930 AT4G18050.1 P-glycoprotein 9 0 P-glycoprotein 9;(source:Araport11) Ipc08G0002920 AT1G27720.4 0 0 TBP-associated factor 4B;(source:Araport11) Ipc08G0002910 AT4G18060.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc08G0002900 AT1G06540.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0002890 AT5G46530.1 AWPM-19-like family protein 0 AWPM-19-like family protein;(source:Araport11) Ipc08G0002880 AT5G46460.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0002870 AT1G06240.1 Protein of unknown function DUF455 0 diiron containing four-helix bundle family ferritin protein, putative (Protein of unknown function DUF455);(source:Araport11) Ipc08G0002860 AT1G78550.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0002850 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002840 AT4G25310.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0002830 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002820 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002810 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002800 AT2G40920.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0002790 AT2G43650.1 Sas10/U3 ribonucleoprotein (Utp) family protein SAS10/C1D family protein. Loss of function mutants are embryo lethal.Ubiquitously expressed, with preference for tissues undergoing rapid cellular growth and differentiation. Sas10/U3 ribonucleoprotein (Utp) family protein;(source:Araport11) Ipc08G0002780 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc08G0002770 AT1G32420.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0002760 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002750 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002740 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002730 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002720 AT4G13820.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc08G0002710 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002700 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002690 AT1G17020.1 senescence-related gene 1 Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene. senescence-related gene 1;(source:Araport11) Ipc08G0002680 AT3G14770.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc08G0002670 AT2G34340.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc08G0002660 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0002650 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0002640 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0002630 AT1G79620.4 0 VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002620 AT4G21670.1 C-terminal domain phosphatase-like 1 encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. C-terminal domain phosphatase-like 1;(source:Araport11) Ipc08G0002610 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0002600 AT5G45650.2 0 0 subtilase family protein;(source:Araport11) Ipc08G0002590 AT1G78580.4 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. trehalose-6-phosphate synthase;(source:Araport11) Ipc08G0002580 AT5G45670.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0002570 AT1G29680.1 Protein of unknown function (DUF1264) 0 histone acetyltransferase (DUF1264);(source:Araport11) Ipc08G0002560 AT4G21800.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370). P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0002550 #N/A #N/A #N/A #N/A Ipc08G0002540 AT1G53430.1 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0002530 AT1G29750.2 receptor-like kinase in flowers 1 Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains. receptor-like kinase in flowers 1;(source:Araport11) Ipc08G0002520 AT3G53690.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0002510 AT4G18910.1 NOD26-like intrinsic protein 1;2 Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells. NOD26-like intrinsic protein 1;(source:Araport11) Ipc08G0002500 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc08G0002490 AT5G45700.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc08G0002480 #N/A #N/A #N/A #N/A Ipc08G0002470 AT3G10980.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc08G0002460 AT1G18880.1 Major facilitator superfamily protein Encodes a low-affinity plasma membrane nitrate transporter expressed in the companion cells of root phloem. Major facilitator superfamily protein;(source:Araport11) Ipc08G0002450 AT4G18880.1 heat shock transcription factor A4A Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses. heat shock transcription factor A4A;(source:Araport11) Ipc08G0002440 AT1G29340.1 plant U-box 17 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato. The mRNA is cell-to-cell mobile. plant U-box 17;(source:Araport11) Ipc08G0002430 AT5G45200.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc08G0002420 AT4G18820.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc08G0002410 AT1G53400.1 Ubiquitin domain-containing protein 0 Ubiquitin domain-containing protein;(source:Araport11) Ipc08G0002400 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc08G0002390 AT1G29330.1 ER lumen protein retaining receptor family protein Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves. ER lumen protein retaining receptor family protein;(source:Araport11) Ipc08G0002380 AT2G34250.3 0 0 SecY protein transport family protein;(source:Araport11) Ipc08G0002370 AT1G29300.1 Plant protein of unknown function (DUF641) 0 intracellular protein transporter, putative (DUF641);(source:Araport11) Ipc08G0002360 AT1G06410.3 0 Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants. trehalose-phosphatase/synthase 7;(source:Araport11) Ipc08G0002350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0002340 AT1G29290.1 0 0 B-cell lymphoma 6 protein;(source:Araport11) Ipc08G0002330 AT4G15140.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0002320 AT4G18800.1 RAB GTPase homolog A1D Encodes RabA1d, a member of the RabA subfamily of small Rab GTPases. RAB GTPase homolog A1D;(source:Araport11) Ipc08G0002310 AT1G29280.1 WRKY DNA-binding protein 65 member of WRKY Transcription Factor; Group II-e The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 65;(source:Araport11) Ipc08G0002300 AT4G18760.1 receptor like protein 51 0 receptor like protein 51;(source:Araport11) Ipc08G0002290 AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc08G0002280 AT2G01420.1 Auxin efflux carrier family protein Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452). Auxin efflux carrier family protein;(source:Araport11) Ipc08G0002270 AT4G39630.1 0 0 translation initiation factor;(source:Araport11) Ipc08G0002260 AT5G45780.1 Leucine-rich repeat protein kinase family protein Encodes one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002250 AT4G18710.1 Protein kinase superfamily protein Encodes BIN2, a member of the ATSK (shaggy-like kinase) family. BIN2 functions in the cross-talk between auxin and brassinosteroid signaling pathways. BIN2 regulates root epidermal cell fate specification by phosphorylating EGL3 and TTG1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. KIB1 interacts with BIN2 blocking its interaction with substrates and promotes BIN2 degradation. Protein kinase superfamily protein;(source:Araport11) Ipc08G0002240 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc08G0002230 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002220 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002210 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002200 AT1G29220.1 transcriptional regulator family protein 0 transcriptional regulator family protein;(source:Araport11) Ipc08G0002190 AT5G45800.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002180 AT4G18700.1 CBL-interacting protein kinase 12 Encodes CBL-interacting protein kinase 12 (CIPK12). CBL-interacting protein kinase 12;(source:Araport11) Ipc08G0002170 AT4G18640.1 Leucine-rich repeat protein kinase family protein Required for root hair elongation during tip growth. The mRNA is cell-to-cell mobile. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002160 AT5G13010.1 RNA helicase family protein Encodes a nuclear localized DEAH-box containing protein that is involved in miRNA biogenesis. Loss of function mutants are embryo lethal. Gene silencing experiments demonstrated its role in the localization of DCL-1 and HYL1 to the nuclear D-body. In silenced lines, miRNA production is suppressed and plants have developmental abnormalities and are hypersensitive to fungal pathogens. RNA helicase family protein;(source:Araport11) Ipc08G0002150 AT1G29240.1 Protein of unknown function (DUF688) 0 transcription initiation factor TFIID subunit, putative (DUF688);(source:Araport11) Ipc08G0002140 AT4G19750.1 Glycosyl hydrolase family protein with chitinase insertion domain 0 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc08G0002130 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0002120 AT2G30070.1 potassium transporter 1 Encodes a high affinity potassium transporter. potassium transporter 1;(source:Araport11) Ipc08G0002110 AT1G08560.1 syntaxin of plants 111 member of SYP11 syntaxin Gene Family syntaxin of plants 111;(source:Araport11) Ipc08G0002100 AT3G12810.2 0 Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6).The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc08G0002090 AT3G24240.1 Leucine-rich repeat receptor-like protein kinase family protein RGFR1 is a leucine-­rich repeat receptor kinase that, together with RGFR2 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc08G0002080 AT1G29195.1 0 0 phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein;(source:Araport11) Ipc08G0002070 AT3G58630.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc08G0002060 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0002050 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc08G0002040 AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc08G0002030 AT2G34150.2 SCAR family protein Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments. SCAR family protein;(source:Araport11) Ipc08G0002010 AT5G18950.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0002020 AT5G15610.2 Proteasome component (PCI) domain protein 0 Proteasome component (PCI) domain protein;(source:Araport11) Ipc02G0006130 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0006150 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0006160 AT4G23790.1 TRICHOME BIREFRINGENCE-LIKE 24 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 24;(source:Araport11) Ipc02G0006170 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0006180 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0006190 AT5G23420.1 high-mobility group box 6 Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain. high-mobility group box 6;(source:Araport11) Ipc02G0006200 AT5G23400.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0025070 AT4G31750.2 0 Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). HOPW1-1-interacting 2;(source:Araport11) Ipc01G0025080 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc01G0025090 AT1G73480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0025100 AT1G48440.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc01G0025110 #N/A #N/A #N/A #N/A Ipc01G0025120 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0025130 AT2G30630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0025140 AT2G27660.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc01G0025150 AT5G65220.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc01G0025160 AT1G18350.1 MAP kinase kinase 7 MAP kinase kinase7. Member of plant mitogen-activated protein kinase kinase group D. Negative regulator of polar auxin transport. Overexpression leads to activation of basal and systemic acquired resistance. MAP kinase kinase 7;(source:Araport11) Ipc01G0025170 AT1G01470.1 Late embryogenesis abundant protein Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against desiccation. Late embryogenesis abundant protein;(source:Araport11) Ipc01G0025180 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0025190 AT1G33480.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0025200 AT1G80420.5 0 Encodes a component of plant break excision repair and functions at several stages during active DNA demethylation in Arabidopsis. BRCT domain-containing DNA repair protein;(source:Araport11) Ipc01G0025210 AT1G14760.2 KNOX Arabidopsis thaliana meinox Encodes a novel Arabidopsis KNOX gene that encodes a MEINOX domain but lacks the homeodomain and interacts with TALE-class homeodomain proteins to modulate their activities KNOX meinox protein;(source:Araport11) Ipc01G0025220 AT5G49880.1 mitotic checkpoint family protein Encodes a spindle assembly checkpoint protein MAD1. The mRNA is cell-to-cell mobile. mitotic checkpoint family protein;(source:Araport11) Ipc01G0025230 AT4G32640.2 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0025240 AT5G14040.1 phosphate transporter 3;1 Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress. phosphate transporter 3;(source:Araport11) Ipc01G0025250 AT4G36130.1 Ribosomal protein L2 family 0 Ribosomal protein L2 family;(source:Araport11) Ipc01G0025260 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0025270 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0025280 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc01G0025290 #N/A #N/A #N/A #N/A Ipc01G0025300 AT3G06840.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025310 AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein;(source:Araport11) Ipc01G0025320 AT1G79120.2 0 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0025330 AT5G21970.2 0 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0025340 AT3G30305.4 0 0 hypothetical protein;(source:Araport11) Ipc01G0025350 AT2G29930.3 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0025360 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc01G0025370 AT4G15960.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0025380 AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 0 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc01G0025390 AT5G49150.2 0 Encodes a transmembrane domain containing protein expressed in sperm cells. Target promoter of the male germline-specific transcription factor DUO1. gamete expressed 2;(source:Araport11) Ipc01G0025400 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc01G0025410 AT5G16453.1 Defensin-like (DEFL) family protein Encodes a defensin-like (DEFL) family protein. Defensin-like (DEFL) family protein;(source:Araport11) Ipc01G0025420 AT3G24535.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0025430 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc01G0025440 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc01G0025450 AT3G05590.1 ribosomal protein L18 Encodes cytoplasmic ribosomal protein L18. ribosomal protein L18;(source:Araport11) Ipc01G0025460 AT3G06850.2 2-oxoacid dehydrogenases acyltransferase family protein dihydrolipoamide branched chain acyltransferase 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) Ipc10G0018410 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018400 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc04G0023850 AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative 0 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP;(source:Araport11) Ipc04G0023860 AT4G34460.1 GTP binding protein beta 1 Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. It seems to be involved in the calcium-mediated response to extracellular ATP. GTP binding protein beta 1;(source:Araport11) Ipc04G0023870 AT4G34490.1 cyclase associated protein 1 CYCLASE ASSOCIATED PROTEIN cyclase associated protein 1;(source:Araport11) Ipc04G0023880 AT4G34500.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0023890 AT4G39260.3 cold, circadian rhythm, and RNA binding 1 Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). cold, circadian rhythm, and RNA binding 1;(source:Araport11) Ipc04G0023900 AT1G10580.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0023910 AT5G60140.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0023920 AT1G75250.2 RAD-like 6 0 RAD-like 6;(source:Araport11) Ipc04G0023930 AT1G49310.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0023940 AT1G49310.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0023950 AT1G49320.1 unknown seed protein like 1 Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function. unknown seed protein like 1;(source:Araport11) Ipc04G0023960 AT1G11750.1 CLP protease proteolytic subunit 6 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). CLP protease proteolytic subunit 6;(source:Araport11) Ipc04G0023970 AT1G49340.2 Phosphatidylinositol 3- and 4-kinase family protein Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots. Phosphatidylinositol 3- and 4-kinase family protein;(source:Araport11) Ipc04G0023980 AT3G18830.1 polyol/monosaccharide transporter 5 This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (myo-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily. polyol/monosaccharide transporter 5;(source:Araport11) Ipc04G0023990 AT5G55125.2 Ribosomal protein L31 0 Ribosomal protein L31;(source:Araport11) Ipc04G0024000 AT4G36720.1 HVA22-like protein K 0 HVA22-like protein K;(source:Araport11) Ipc04G0024010 AT1G47740.3 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc04G0024020 AT5G66680.1 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins. dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein;(source:Araport11) Ipc04G0024030 AT4G34320.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc04G0024040 AT1G49380.1 cytochrome c biogenesis protein family 0 cytochrome c biogenesis protein family;(source:Araport11) Ipc04G0024050 AT4G34350.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling. 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;(source:Araport11) Ipc04G0024060 AT4G34370.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0024070 AT2G16070.2 plastid division2 An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. plastid division2;(source:Araport11) Ipc04G0024080 AT2G23690.1 0 0 HTH-type transcriptional regulator;(source:Araport11) Ipc04G0024090 AT2G16050.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc04G0024100 AT3G50810.3 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0024110 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0024120 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0024130 AT3G50170.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc04G0024140 AT3G49740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0024150 AT2G15910.3 0 0 CSL zinc finger domain-containing protein;(source:Araport11) Ipc04G0024160 AT1G49470.1 Family of unknown function (DUF716) 0 transmembrane epididymal protein (DUF716);(source:Araport11) Ipc04G0024170 AT2G26500.2 cytochrome b6f complex subunit (petM), putative 0 cytochrome b6f complex subunit (petM);(source:Araport11) Ipc04G0024180 AT5G66980.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0024190 AT4G21990.2 APS reductase 3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APS reductase 3;(source:Araport11) Ipc04G0024200 AT4G16745.2 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc04G0024210 AT5G21030.2 0 0 PAZ domain-containing protein / piwi domain-containing protein;(source:Araport11) Ipc04G0024220 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc04G0024230 AT2G35760.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0024240 AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0024250 AT2G15900.1 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0 phox domain-containing protein;(source:Araport11) Ipc04G0024260 AT2G15890.1 maternal effect embryo arrest 14 Encodes CBP1, a regulator of transcription initiation in central cell-mediated pollen tube guidance. maternal effect embryo arrest 14;(source:Araport11) Ipc04G0024270 AT3G19020.2 0 Pollen expressed protein required for pollen tube growth. Along with other members of the LRX family, interacts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0024280 AT2G15860.1 0 0 BAT2 domain protein;(source:Araport11) Ipc04G0024290 AT2G23610.1 methyl esterase 3 Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro. methyl esterase 3;(source:Araport11) Ipc04G0024300 AT3G54340.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc04G0024310 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0024320 AT5G23770.1 DOMAIN OF UNKNOWN FUNCTION 724 8 Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 8);(source:Araport11) Ipc04G0024330 AT2G15695.1 Protein of unknown function DUF829, transmembrane 53 0 peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53);(source:Araport11) Ipc04G0024340 AT1G49620.1 Cyclin-dependent kinase inhibitor family protein Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. Cyclin-dependent kinase inhibitor family protein;(source:Araport11) Ipc04G0024350 AT3G19170.1 presequence protease 1 Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers presequence protease 1;(source:Araport11) Ipc04G0024360 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0024370 AT3G19130.1 RNA-binding protein 47B RBP47B, is a component of the stress granule proteome and interacts with 2',3'-cAMP. RNA-binding protein 47B;(source:Araport11) Ipc04G0024380 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0024390 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0024400 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0024410 AT2G15760.1 Protein of unknown function (DUF1645) 0 calmodulin-binding protein (DUF1645);(source:Araport11) Ipc04G0024420 AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase;(source:Araport11) Ipc04G0024430 AT2G26520.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0024440 AT3G19090.1 RNA-binding protein 0 RNA-binding protein;(source:Araport11) Ipc04G0024450 AT2G03500.1 Homeodomain-like superfamily protein Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression. Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0024460 AT2G19940.2 oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding 0 Putative N-acetyl-gamma-glutamyl-phosphate reductase;(source:Araport11) Ipc04G0024470 AT5G61200.4 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc04G0024480 AT3G19190.3 0 Encodes autophagy-related 2 (ATG2).The mRNA is cell-to-cell mobile. autophagy 2;(source:Araport11) Ipc04G0024490 AT4G34419.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0024500 AT3G19210.1 homolog of RAD54 Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. DNA repair/recombination protein;(source:Araport11) Ipc04G0024510 AT2G15680.1 Calcium-binding EF-hand family protein Encodes a calmodulin-like protein. Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0024520 AT3G19220.1 protein disulfide isomerases Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids. protein disulfide isomerase;(source:Araport11) Ipc04G0024530 AT4G34412.1 0 0 EKC/KEOPS complex subunit tprkb-like protein;(source:Araport11) Ipc04G0024540 AT3G19240.1 Vacuolar import/degradation, Vid27-related protein 0 Vacuolar import/degradation, Vid27-related protein;(source:Araport11) Ipc04G0024550 AT4G34410.1 redox responsive transcription factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Regulates programmed cell death (PCD) inhibitor genes. Involved in retarding programmed cell death under salt stress due to the regulation of processes participating in ROS inhibition. ERF-regulated transcripts belong to the tryptophan biosynthesis, tryptophan metabolism, and downstream plant hormone signal transduction pathways, where ERF109 potentially acts as a ?master switch? mediator of a cascade of consecutive events across the three pathways, promoting plant growth and re-adjustment to homeostasis due the direct participation in auxin biosynthesis leading to the plant?s ability to tolerate salt stress. redox responsive transcription factor 1;(source:Araport11) Ipc04G0024560 AT4G34410.1 redox responsive transcription factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Regulates programmed cell death (PCD) inhibitor genes. Involved in retarding programmed cell death under salt stress due to the regulation of processes participating in ROS inhibition. ERF-regulated transcripts belong to the tryptophan biosynthesis, tryptophan metabolism, and downstream plant hormone signal transduction pathways, where ERF109 potentially acts as a ?master switch? mediator of a cascade of consecutive events across the three pathways, promoting plant growth and re-adjustment to homeostasis due the direct participation in auxin biosynthesis leading to the plant?s ability to tolerate salt stress. redox responsive transcription factor 1;(source:Araport11) Ipc04G0024570 AT3G19260.1 LAG1 homologue 2 LAG1 homolog. Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. It encodes a ceramide synthase essential for production of LCFA-ceramides (mainly C16). LAG1 homologue 2;(source:Araport11) Ipc04G0024580 AT3G19270.2 0 Encodes a protein with ABA 8 Prime-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. cytochrome P450, family 707, subfamily A, polypeptide 4;(source:Araport11) Ipc04G0024590 AT2G15620.1 nitrite reductase 1 Involved in the second step of nitrate assimilation. Its expression is induced by nitrate. The mRNA is cell-to-cell mobile. nitrite reductase 1;(source:Araport11) Ipc04G0024600 AT4G33980.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0024610 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc04G0024620 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc04G0024630 AT4G34630.1 0 0 prostatic spermine-binding-like protein;(source:Araport11) Ipc04G0024640 AT1G45249.1 abscisic acid responsive elements-binding factor 2 Leucine zipper transcription factor that binds to the abscisic acid (ABA)–responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment. abscisic acid responsive elements-binding factor 2;(source:Araport11) Ipc04G0024650 AT2G15570.1 Thioredoxin superfamily protein chloroplast protein similar to prokaryotic thioredoxin. Thioredoxin superfamily protein;(source:Araport11) Ipc04G0024660 AT2G15560.1 Putative endonuclease or glycosyl hydrolase Putative endonuclease Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc04G0024670 AT3G19300.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0024680 AT1G49740.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc01G0023910 AT1G71960.1 ATP-binding casette family G25 Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses. ATP-binding casette family G25;(source:Araport11) Ipc01G0023920 AT1G14650.3 0 0 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein;(source:Araport11) Ipc01G0023930 AT3G10860.2 0 0 Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11) Ipc03G0022830 AT5G65613.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0022820 AT3G57230.4 0 MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes. AGL16 can directly interact with SVP and indirectly interact with FLC. Furthermore, the accumulation of AGL16 transcripts is modulated by miR824 (AT4G24415). The flowering time effect for the miR824/AGL16 module is more obvious in the Col-FRI background than in the Col-0 background. AGL16 controls flowering via a allelic dosage effect in long-day non-vernalized conditions. AGAMOUS-like 16;(source:Araport11) Ipc03G0022810 AT1G70780.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0022800 AT5G25200.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc03G0022790 AT5G37740.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0022780 AT1G66400.1 calmodulin like 23 Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23;(source:Araport11) Ipc03G0022770 AT1G66430.1 pfkB-like carbohydrate kinase family protein Encodes one of the several Arabidopsis fructokinases. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). Important for seed oil accumulation and vascular development. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc03G0022760 AT3G03430.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0022750 AT5G37790.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0022740 AT1G09700.2 0 Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin. dsRNA-binding domain-like superfamily protein;(source:Araport11) Ipc03G0022730 AT5G37800.1 RHD SIX-LIKE 1 0 RHD SIX-LIKE 1;(source:Araport11) Ipc03G0022720 #N/A #N/A #N/A #N/A Ipc03G0022710 AT3G03440.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0022700 AT5G37810.1 NOD26-like intrinsic protein 4;1 0 NOD26-like intrinsic protein 4;(source:Araport11) Ipc03G0022690 AT3G03380.1 DegP protease 7 Encodes a putative DegP protease. The mRNA is cell-to-cell mobile. DegP protease 7;(source:Araport11) Ipc03G0022680 AT3G03341.1 0 0 cold-regulated protein;(source:Araport11) Ipc03G0022670 AT1G49000.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0022660 AT2G01340.1 0 Encodes a protein whose expression is responsive to nematode infection. plastid movement impaired protein;(source:Araport11) Ipc03G0022650 #N/A #N/A #N/A #N/A Ipc03G0022640 AT5G37850.4 0 Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc03G0022630 AT1G66510.4 0 0 AAR2 protein family;(source:Araport11) Ipc03G0022620 AT5G17450.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc03G0022610 AT1G71090.1 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc03G0022600 AT2G01275.4 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0022590 AT1G66740.1 ASF1 like histone chaperone Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility. Its expression is regulated during cell cycle progression through E2F transcription factors. The protein interacts with acetylated histones H3 and H4 and HAM acetyltransferases, proteins known to be involved in cell cycle control and DNA repair. ASF1 like histone chaperone;(source:Araport11) Ipc03G0022580 AT1G60640.5 0 0 stress response protein;(source:Araport11) Ipc03G0022570 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022560 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022550 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022540 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022530 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc03G0022520 AT5G09400.1 K+ uptake permease 7 Encodes a potassium uptake permease with a functional adenylate cyclase (AC) center. The first 100 aa of this protein can complement AC-deficient E. coli and display AC activity in vitro. KUP7 is localized to the plasma membrane where it functions in potassium uptake and translocation. K+ uptake permease 7;(source:Araport11) Ipc03G0022510 AT1G15170.2 0 0 MATE efflux family protein;(source:Araport11) Ipc03G0022500 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022490 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0022480 AT2G47485.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0022470 AT3G49910.1 Translation protein SH3-like family protein 0 Translation protein SH3-like family protein;(source:Araport11) Ipc03G0022460 AT3G02600.1 lipid phosphate phosphatase 3 Encodes phosphatidic acid phosphatase. Expressed during germination. lipid phosphate phosphatase 3;(source:Araport11) Ipc03G0022450 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc03G0022440 AT1G66840.2 0 Encodes a coiled-coil protein WEB2 (weak chloroplast movement under blue light 2, also named PMI2/plastid movement impaired 2). Involved in chloroplast avoidance movement under intermediate and high light intensities. WEB2, together with another coiled-coil protein WEB1 (AT2G26570), maintains the chloroplast photorelocation movement velocity. PLASTID MOVEMENT IMPAIRED protein (DUF827);(source:Araport11) Ipc03G0022430 AT5G38200.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc03G0022420 AT5G16200.2 0 0 50S ribosomal protein-like protein;(source:Araport11) Ipc03G0022410 AT5G38220.3 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0022400 AT3G02580.1 sterol 1 Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype. sterol 1;(source:Araport11) Ipc03G0022390 AT5G16170.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0022380 AT1G68380.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0022370 AT5G16150.3 plastidic GLC translocator Encodes a putative plastidic glucose transporter. plastidic GLC translocator;(source:Araport11) Ipc03G0022360 AT5G38300.1 0 0 homeobox Hox-B3-like protein;(source:Araport11) Ipc03G0022350 AT1G67040.1 0 0 DnaA initiator-associating protein;(source:Araport11) Ipc03G0022340 AT3G18280.2 0 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0022330 AT2G18410.1 0 0 elongator complex protein;(source:Araport11) Ipc03G0022320 AT1G67070.2 0 Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene Primes expression pattern is responding to the level of sugar in the cell. Mannose-6-phosphate isomerase, type I;(source:Araport11) Ipc03G0022310 AT3G02560.3 0 0 Ribosomal protein S7e family protein;(source:Araport11) Ipc03G0022300 AT5G38360.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0022290 AT5G38380.1 0 0 zinc transporter;(source:Araport11) Ipc03G0022280 #N/A #N/A #N/A #N/A Ipc03G0022270 AT1G67080.1 abscisic acid (aba)-deficient 4 Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein. abscisic acid (aba)-deficient 4;(source:Araport11) Ipc03G0022260 AT5G16120.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0022250 AT5G38420.1 Ribulose bisphosphate carboxylase (small chain) family protein Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Ribulose bisphosphate carboxylase (small chain) family protein;(source:Araport11) Ipc03G0022240 AT3G02550.1 LOB domain-containing protein 41 0 LOB domain-containing protein 41;(source:Araport11) Ipc03G0022230 AT5G15270.2 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc03G0022220 AT1G68530.1 3-ketoacyl-CoA synthase 6 Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 6;(source:Araport11) Ipc03G0022210 AT3G02540.1 Rad23 UV excision repair protein family Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. Rad23 UV excision repair protein family;(source:Araport11) Ipc03G0022200 AT5G16080.1 carboxyesterase 17 0 carboxyesterase 17;(source:Araport11) Ipc03G0022190 AT5G38690.2 0 0 Zinc-finger domain of monoamine-oxidase A repressor R1 protein;(source:Araport11) Ipc03G0022180 AT5G38660.1 acclimation of photosynthesis to environment mutant has Altered acclimation responses; acclimation of photosynthesis to environment;(source:Araport11) Ipc03G0022170 AT5G16030.4 0 0 mental retardation GTPase activating protein;(source:Araport11) Ipc03G0022160 #N/A #N/A #N/A #N/A Ipc03G0022150 AT3G25780.1 allene oxide cyclase 3 Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884. The mRNA is cell-to-cell mobile. allene oxide cyclase 3;(source:Araport11) Ipc03G0022140 AT4G36810.1 geranylgeranyl pyrophosphate synthase 1 Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. The mRNA is cell-to-cell mobile. geranylgeranyl pyrophosphate synthase 1;(source:Araport11) Ipc03G0022130 AT5G24310.3 0 One of four ABI-like proteins. Involved in trichome morphogenesis, root elongation. Associates with microtubules. ABL interactor-like protein 3;(source:Araport11) Ipc03G0022120 AT5G66680.1 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins. dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein;(source:Araport11) Ipc03G0022110 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0022100 AT2G18550.1 homeobox protein 21 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 21;(source:Araport11) Ipc03G0022090 AT5G66710.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0022080 AT4G36730.1 G-box binding factor 1 member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box G-box binding factor 1;(source:Araport11) Ipc03G0022070 AT4G36710.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc03G0022060 AT5G49530.1 SIN-like family protein 0 SIN-like family protein;(source:Araport11) Ipc03G0022050 AT4G36680.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0022040 AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0022030 AT1G45170.1 0 0 outer envelope pore 24B-like protein;(source:Araport11) Ipc03G0022020 AT2G18500.1 ovate family protein 7 0 ovate family protein 7;(source:Araport11) Ipc03G0022010 AT4G36670.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0022000 AT4G36660.1 Protein of unknown function (DUF1195) 0 polyol transporter, putative (DUF1195);(source:Araport11) Ipc03G0021990 AT3G50690.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc03G0021980 AT3G50685.1 0 0 anti-muellerian hormone type-2 receptor;(source:Araport11) Ipc03G0021970 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc03G0021950 AT2G18470.3 0 Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4;(source:Araport11) Ipc03G0021960 #N/A #N/A #N/A #N/A Ipc03G0021940 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0021930 AT3G50670.1 U1 small nuclear ribonucleoprotein-70K Encodes U1 snRNP 70K U1 small nuclear ribonucleoprotein-70K;(source:Araport11) Ipc03G0021920 AT2G18460.1 like COV 3 0 like COV 3;(source:Araport11) Ipc03G0021910 AT1G20460.1 0 0 NADH-ubiquinone oxidoreductase chain;(source:Araport11) Ipc03G0021900 AT3G50660.1 Cytochrome P450 superfamily protein Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. Cytochrome P450 superfamily protein;(source:Araport11) Ipc03G0021890 AT5G66760.1 succinate dehydrogenase 1-1 One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. The mRNA is cell-to-cell mobile. succinate dehydrogenase 1-1;(source:Araport11) Ipc03G0021880 AT5G66770.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc03G0021870 AT2G18400.1 ribosomal protein L6 family protein 0 ribosomal protein L6 family protein;(source:Araport11) Ipc03G0021860 AT3G50860.1 Clathrin adaptor complex small chain family protein 0 Clathrin adaptor complex small chain family protein;(source:Araport11) Ipc03G0021850 AT4G36630.1 Vacuolar sorting protein 39 0 Vacuolar sorting protein 39;(source:Araport11) Ipc03G0021840 AT3G50870.1 GATA type zinc finger transcription factor family protein Encodes a GATA transcriptional regulator required to position the proembryo boundary in the early embryo. Regulates shoot apical meristem and flower development. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc03G0021830 AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc03G0021820 AT2G18350.1 homeobox protein 24 0 homeobox protein 24;(source:Araport11) Ipc03G0021810 AT1G75250.2 RAD-like 6 0 RAD-like 6;(source:Araport11) Ipc03G0021800 AT1G67530.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0021790 AT4G36540.1 BR enhanced expression 2 Encodes the brassinosteroid signaling component BEE2 (BR-ENHANCED EXPRESSION 2). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BR enhanced expression 2;(source:Araport11) Ipc03G0021780 AT2G18280.2 tubby like protein 2 Member of TLP family The mRNA is cell-to-cell mobile. tubby like protein 2;(source:Araport11) Ipc03G0021770 AT5G66530.3 0 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc03G0021760 AT2G18260.2 0 member of SYP11 Gene Family syntaxin of plants 112;(source:Araport11) Ipc03G0021750 AT2G18250.1 4-phosphopantetheine adenylyltransferase At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis. 4-phosphopantetheine adenylyltransferase;(source:Araport11) Ipc03G0021740 AT2G18230.1 pyrophosphorylase 2 Encodes a protein that might have inorganic pyrophosphatase activity. pyrophosphorylase 2;(source:Araport11) Ipc03G0021730 AT4G36520.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc03G0021720 AT5G66460.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc03G0021710 AT1G56600.1 galactinol synthase 2 GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress. galactinol synthase 2;(source:Araport11) Ipc03G0021700 AT2G47180.1 galactinol synthase 1 GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress. galactinol synthase 1;(source:Araport11) Ipc03G0021690 AT5G66450.2 Phosphatidic acid phosphatase (PAP2) family protein Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene (LPPepsilon2) and LPPepsilon1, appear to be less important for diacylglycerol formation in the plastids than LPPgamma. Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc03G0021680 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc03G0021670 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0021660 AT3G60820.3 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes 20S proteasome beta subunit PBF1 (PBF1). N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc03G0021650 AT1G27660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0021640 AT2G18170.1 MAP kinase 7 0 MAP kinase 7;(source:Araport11) Ipc03G0021630 AT3G26750.1 0 0 HECT-like ubiquitin-conjugating enzyme (E2)-binding protein;(source:Araport11) Ipc03G0021620 AT5G66400.1 Dehydrin family protein Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells. Dehydrin family protein;(source:Araport11) Ipc03G0021610 AT5G44230.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc03G0021600 AT4G36440.1 0 0 G-protein coupled receptor;(source:Araport11) Ipc03G0021590 AT5G66390.1 Peroxidase superfamily protein Encodes a peroxidase that is involved in lignin biosynthesis. Peroxidase superfamily protein;(source:Araport11) Ipc03G0021580 AT5G66380.1 folate transporter 1 Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves. folate transporter 1;(source:Araport11) Ipc03G0021570 AT4G36390.1 Methylthiotransferase 0 Methylthiotransferase;(source:Araport11) Ipc03G0021560 AT5G17280.1 0 0 oxidoreductase-like protein, amino-terminal protein;(source:Araport11) Ipc03G0021550 AT3G51070.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0021540 AT3G51060.1 Lateral root primordium (LRP) protein-related A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC) Lateral root primordium (LRP) protein-like protein;(source:Araport11) Ipc03G0021530 AT3G51040.3 RTE1-homolog Encodes a protein of 231 amino acids with 51% identity to RTE1 over 209 amino acids. RTE1-homolog;(source:Araport11) Ipc03G0021520 AT3G51030.1 thioredoxin H-type 1 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin H-type 1;(source:Araport11) Ipc03G0021510 AT4G36360.1 beta-galactosidase 3 putative beta-galactosidase (BGAL3 gene) beta-galactosidase 3;(source:Araport11) Ipc03G0021500 AT5G66360.2 Ribosomal RNA adenine dimethylase family protein Encodes a mitochondrial rRNA dimethylase. Ribosomal RNA adenine dimethylase family protein;(source:Araport11) Ipc03G0021490 AT3G54350.5 0 0 Forkhead-associated (FHA) domain-containing protein;(source:Araport11) Ipc03G0021480 AT5G66330.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc03G0021470 AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc03G0021460 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc03G0021450 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc03G0021440 AT2G16460.1 Protein of unknown function (DUF1640) 0 coiled-coil 90B-like protein (DUF1640);(source:Araport11) Ipc03G0021430 AT4G36210.3 Protein of unknown function (DUF726) 0 transmembrane/coiled-coil protein (DUF726);(source:Araport11) Ipc03G0021420 AT1G76920.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc03G0021410 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc03G0021400 AT3G51120.1 DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding 0 zinc finger CCCH domain-containing protein 44;(source:Araport11) Ipc03G0021390 AT3G51130.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0021380 AT3G51140.1 Protein of unknown function (DUF3353) 0 DnaJ (DUF3353);(source:Araport11) Ipc03G0021370 AT2G21330.1 fructose-bisphosphate aldolase 1 0 fructose-bisphosphate aldolase 1;(source:Araport11) Ipc03G0021360 AT4G36195.3 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc03G0021350 AT1G15380.2 Lactoylglutathione lyase / glyoxalase I family protein Glyoxalase which affects ABA?JA crosstalk. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc03G0021340 AT1G11390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0021330 AT2G18060.3 0 Encodes a NAC-domain transcription factor that is expressed in developing vessels and protoxylem. Along with other members of this family, VND1 appears to regulate the development of genes required for secondary cell wall biosynthesis. vascular related NAC-domain protein 1;(source:Araport11) Ipc03G0021310 AT5G42520.2 basic pentacysteine 6 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 6;(source:Araport11) Ipc03G0021320 AT3G27960.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0021300 AT2G44710.4 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0021290 AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds The mRNA is cell-to-cell mobile. peptidylprolyl cis/trans isomerase, NIMA-interacting 1;(source:Araport11) Ipc03G0021280 AT1G20580.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc03G0021270 AT5G45600.1 YEATS family protein The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. It negatively regulates flowering by controlling the H4 acetylation levels in the FLC and FT chromatin. YEATS family protein;(source:Araport11) Ipc03G0021260 AT2G17990.1 0 Calcium-dependent protein kinase 1 adaptor protein involved in vacuolar transport and lytic vacuole biogenesis. polyamine-modulated factor 1-binding protein;(source:Araport11) Ipc03G0021250 AT2G17950.1 Homeodomain-like superfamily protein Homeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development. Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0021240 AT2G17930.1 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain Component of the SPT module of the SAGA complex. Phosphatidylinositol 3- and 4-kinase family protein with FAT domain-containing protein;(source:Araport11) Ipc03G0021230 AT5G66230.1 Chalcone-flavanone isomerase family protein 0 Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc03G0021220 AT1G75750.1 GAST1 protein homolog 1 GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data The mRNA is cell-to-cell mobile. GAST1 protein homolog 1;(source:Araport11) Ipc03G0021210 AT3G51240.1 flavanone 3-hydroxylase Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR). flavanone 3-hydroxylase;(source:Araport11) Ipc03G0021200 AT5G26910.3 0 Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division. GPI-anchored adhesin-like protein;(source:Araport11) Ipc03G0021190 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc03G0021180 AT2G17890.1 calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated. calcium-dependent protein kinase 16;(source:Araport11) Ipc03G0021170 AT4G36050.3 0 Encodes a base excision repair protein with 3'-phosphatase activity and strong 3'-5' exonuclease activity. Together with ZDP, it plays overlapping roles in the maintenance of epigenome and genome stability in plants. endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc03G0021160 AT4G36040.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc03G0021150 AT5G66200.1 armadillo repeat only 2 Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules. armadillo repeat only 2;(source:Araport11) Ipc03G0021140 AT4G18840.3 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0021130 AT5G66190.1 ferredoxin-NADP(+)-oxidoreductase 1 Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane. ferredoxin-NADP[+]-oxidoreductase 1;(source:Araport11) Ipc03G0021120 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc03G0021110 AT4G36010.2 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc03G0021100 AT4G34950.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc03G0021090 AT5G66180.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc03G0021080 AT4G38630.1 regulatory particle non-ATPase 10 Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities regulatory particle non-ATPase 10;(source:Araport11) Ipc03G0021070 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) Ipc03G0021060 AT3G51280.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0021050 AT3G51290.3 0 0 pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632);(source:Araport11) Ipc03G0021040 AT2G24960.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc03G0021030 AT5G66130.1 RADIATION SENSITIVE 17 Encodes a homolog to yeast RAD17. Involved in the regulation of DNA damage repair and homologous recombination. Mutant has increased sensitivity to MMS and increased telomere lengths. RADIATION SENSITIVE 17;(source:Araport11) Ipc03G0021020 AT5G66120.2 3-dehydroquinate synthase, putative 0 3-dehydroquinate synthase;(source:Araport11) Ipc03G0021010 AT2G17800.2 Arabidopsis RAC-like 1 A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. RAC-like 1;(source:Araport11) Ipc03G0021000 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc03G0020990 AT4G35930.4 0 0 F-box family protein;(source:Araport11) Ipc03G0020980 AT4G35920.5 0 Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium. PLAC8 family protein;(source:Araport11) Ipc03G0020970 AT1G12760.2 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc03G0020960 AT4G35900.2 0 bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc03G0020950 AT4G35890.1 winged-helix DNA-binding transcription factor family protein Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence. The mRNA is cell-to-cell mobile. winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc03G0020940 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0020930 AT5G66090.1 0 0 cell wall integrity/stress response component;(source:Araport11) Ipc03G0020920 AT1G63855.4 0 0 Putative methyltransferase family protein;(source:Araport11) Ipc03G0020910 AT4G35880.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0020900 AT1G13390.2 0 0 translocase subunit seca;(source:Araport11) Ipc03G0020890 AT4G35870.1 early-responsive to dehydration stress protein (ERD4) 0 early-responsive to dehydration stress protein (ERD4);(source:Araport11) Ipc03G0020880 AT4G38520.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc03G0020870 AT1G30570.1 hercules receptor kinase 2 Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 2;(source:Araport11) Ipc03G0020860 AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc03G0020850 AT5G66070.5 0 E3 ubiquitin ligase that functions in negative regulation of ABA signaling. RING/U-box superfamily protein;(source:Araport11) Ipc03G0020840 AT5G66060.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0020830 AT2G17710.1 0 0 Big1;(source:Araport11) Ipc03G0020820 AT4G35790.2 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc03G0020810 AT4G35790.2 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc03G0020800 AT3G12830.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc03G0020790 AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc03G0020780 AT2G38290.1 ammonium transporter 2 encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively. ammonium transporter 2;(source:Araport11) Ipc12G0005320 AT1G18370.1 ATP binding microtubule motor family protein Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal. ATP binding microtubule motor family protein;(source:Araport11) Ipc12G0005330 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0005340 AT2G43040.2 0 encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc12G0005350 AT5G38260.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0005360 AT5G07580.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive transcription factor;(source:Araport11) Ipc12G0005370 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0005380 AT5G22350.1 Protein of unknown function (DUF1022) 0 fission ELM1-like protein (DUF1022);(source:Araport11) Ipc12G0005390 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc12G0005400 AT5G38260.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0005410 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0005420 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0005430 AT3G10220.1 tubulin folding cofactor B Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. The mRNA is cell-to-cell mobile. tubulin folding cofactor B;(source:Araport11) Ipc12G0005440 #N/A #N/A #N/A #N/A Ipc12G0005450 AT3G07740.2 homolog of yeast ADA2 2A encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1 ADA2 2A;(source:Araport11) Ipc12G0005460 AT5G62180.1 carboxyesterase 20 0 carboxyesterase 20;(source:Araport11) Ipc12G0005470 #N/A #N/A #N/A #N/A Ipc12G0005480 AT5G36225.1 0 0 zinc knuckle protein;(source:Araport11) Ipc12G0005490 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc12G0005500 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc12G0005510 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc12G0005520 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0005530 AT1G72280.1 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum oxidoreductin endoplasmic reticulum oxidoreductins 1;(source:Araport11) Ipc12G0005540 AT1G67000.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0005550 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc12G0005560 AT3G01810.3 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc12G0005570 AT5G19830.1 Peptidyl-tRNA hydrolase family protein 0 Peptidyl-tRNA hydrolase family protein;(source:Araport11) Ipc12G0005580 #N/A #N/A #N/A #N/A Ipc12G0005590 AT1G73805.1 Calmodulin binding protein-like Encodes SAR Deficient 1 (SARD1), a key regulator for ICS1 (Isochorismate Synthase 1) induction and salicylic acid (SA) synthesis. Calmodulin binding protein-like protein;(source:Araport11) Ipc12G0005600 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc12G0005610 AT3G50010.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc12G0005620 AT4G01935.1 0 0 insulin-induced protein;(source:Araport11) Ipc12G0005630 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc12G0005640 AT5G10630.3 0 Interacts with both Pelota1 and Pelota2 to form the non-stop decay (NSD) complex which is involved in quality control during translation. Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11) Ipc12G0005650 AT3G18290.1 zinc finger protein-related Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. The mRNA is cell-to-cell mobile. zinc finger protein-like protein;(source:Araport11) Ipc11G0009200 AT3G24040.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc11G0009210 AT3G55280.2 ribosomal protein L23AB 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA. ribosomal protein L23AB;(source:Araport11) Ipc11G0009220 AT4G01470.1 tonoplast intrinsic protein 1;3 Encodes AtTIP1;3, functions as water and urea channels in pollen. tonoplast intrinsic protein 1;(source:Araport11) Ipc11G0009230 AT2G39490.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc11G0009240 AT3G55340.1 phragmoplastin interacting protein 1 Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation. phragmoplastin interacting protein 1;(source:Araport11) Ipc11G0009250 AT3G55350.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) Ipc11G0009260 AT2G28710.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc11G0009270 AT1G70505.2 0 0 transmembrane protein;(source:Araport11) Ipc11G0009280 AT2G39510.1 nodulin MtN21 /EamA-like transporter family protein Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc10G0008620 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc10G0008600 AT3G20790.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0008590 AT1G04640.2 lipoyltransferase 2 Lipoyltransferase, located in mitochondria but not found in chloroplasts lipoyltransferase 2;(source:Araport11) Ipc10G0008570 AT3G12120.2 fatty acid desaturase 2 Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. fatty acid desaturase 2;(source:Araport11) Ipc10G0008560 AT1G23030.1 ARM repeat superfamily protein Encodes a plant U-Box protein that is capable of binding and ubiquitinating MYC2 in vitro, acting as an E3 ligase. Unlike PUB10, its closest homolog in Arabidopsis, it does not appear to play a major role in the MeJA-mediated response. ARM repeat superfamily protein;(source:Araport11) Ipc10G0008550 AT5G06720.1 peroxidase 2 Encodes a peroxidase with diverse roles in the wound response, flower development, and syncytium formation. peroxidase 2;(source:Araport11) Ipc10G0008540 AT1G50480.1 10-formyltetrahydrofolate synthetase 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete The mRNA is cell-to-cell mobile. 10-formyltetrahydrofolate synthetase;(source:Araport11) Ipc10G0008530 AT1G52070.2 0 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc10G0008520 AT1G05770.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc10G0008660 AT5G21140.1 embryo defective 1379 Encodes a nuclear localized, structural subunit of the SMC 5/6 complex and a non- SMC element. Loss of function results in abnormal cell division and embryo lethality. Analysis of partially rescued lines indicates a role in double strand break DNA repair. Similar phenotype to NSE3 which it also interacts with. embryo defective 1379;(source:Araport11) Ipc10G0008640 AT5G40160.1 Ankyrin repeat family protein Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality. Ankyrin repeat family protein;(source:Araport11) Ipc10G0008500 AT3G59540.1 Ribosomal L38e protein family 0 Ribosomal L38e protein family;(source:Araport11) Ipc10G0008480 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0008460 AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc10G0008440 AT1G11880.1 transferases, transferring hexosyl groups 0 transferases, transferring hexosyl groups;(source:Araport11) Ipc10G0008430 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc10G0008420 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc10G0008410 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc10G0008400 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc10G0008390 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc10G0008380 AT5G19860.1 Protein of unknown function, DUF538 0 transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc10G0008370 AT2G42520.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0008360 AT3G12260.1 LYR family of Fe/S cluster biogenesis protein 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc10G0008350 AT3G42630.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0008340 AT3G58500.1 protein phosphatase 2A-4 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. protein phosphatase 2A-4;(source:Araport11) Ipc10G0008330 AT3G13620.1 Amino acid permease family protein Encodes POLYAMINE UPTAKE TRANSPORTER 4, an amino acid permease family protein. Amino acid permease family protein;(source:Araport11) Ipc10G0008320 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008310 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008300 AT3G13610.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a Fe(II)- and 2-oxoglutarate-dependent dioxygenase family gene F6'H1. Mutations in this gene compromise iron uptake and the production of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008290 AT1G28680.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0008280 AT1G55290.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008270 AT5G01430.2 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc10G0008260 AT1G55290.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to oxidoreductase, 2OG-Fe(II) oxygenase 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008250 AT1G55320.1 acyl-activating enzyme 18 Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins. acyl-activating enzyme 18;(source:Araport11) Ipc10G0008240 AT3G13550.1 Ubiquitin-conjugating enzyme family protein Encodes a protein similar to ubiquitin-conjugating enzyme (E2) variant proteins (UEV); lacks catalytic cysteine residue found in ubiquitin-conjugating enzyme E2. Represses photomorphogenesis and induces skotomorphogenesis in the dark. Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc10G0008230 AT3G13560.5 0 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc10G0008220 AT3G13570.1 SC35-like splicing factor 30A encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SC35-like splicing factor 30A;(source:Araport11) Ipc10G0008210 AT4G15900.1 pleiotropic regulatory locus 1 Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10. pleiotropic regulatory locus 1;(source:Araport11) Ipc10G0008200 AT4G15900.1 pleiotropic regulatory locus 1 Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10. pleiotropic regulatory locus 1;(source:Araport11) Ipc10G0008190 AT3G13600.2 0 0 calmodulin-binding family protein;(source:Araport11) Ipc10G0008180 AT5G19820.1 ARM repeat superfamily protein Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus. ARM repeat superfamily protein;(source:Araport11) Ipc10G0008170 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc10G0008160 AT3G10250.5 0 0 histidine-tRNA ligase;(source:Araport11) Ipc10G0008150 AT5G19760.1 Mitochondrial substrate carrier family protein Encodes a novel mitochondrial carrier capable of transporting both dicarboxylates (such as malate, oxaloacetate, oxoglutarate, and maleate) and tricarboxylates (such as citrate, isocitrate, cis-aconitate, and trans-aconitate). Mitochondrial substrate carrier family protein;(source:Araport11) Ipc10G0008140 AT1G55325.4 0 Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. RNA polymerase II transcription mediator;(source:Araport11) Ipc10G0008130 AT1G55340.1 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc10G0008120 AT3G13510.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal peptidase, putative (DUF239);(source:Araport11) Ipc10G0008110 AT1G55365.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0008100 AT4G04220.1 receptor like protein 46 0 receptor like protein 46;(source:Araport11) Ipc10G0008090 AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region Encodes a member of a novel plant protein family containing a PDZ, a K-box, and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding. The mRNA is cell-to-cell mobile. protein containing PDZ domain, a K-box domain, and a TPR region;(source:Araport11) Ipc10G0008080 AT3G13470.1 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230). TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc10G0008070 AT5G56460.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0008060 AT3G13460.1 evolutionarily conserved C-terminal region 2 Physically interacts with CIPK1. evolutionarily conserved C-terminal region 2;(source:Araport11) Ipc10G0008050 AT1G55510.1 branched-chain alpha-keto acid decarboxylase E1 beta subunit branched-chain alpha-keto acid decarboxylase E1 beta branched-chain alpha-keto acid decarboxylase E1 beta subunit;(source:Araport11) Ipc10G0008040 AT1G55520.4 0 TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex. TATA binding protein 2;(source:Araport11) Ipc10G0008030 AT4G26370.1 antitermination NusB domain-containing protein 0 antitermination NusB domain-containing protein;(source:Araport11) Ipc10G0008020 AT5G56360.1 calmodulin-binding protein Encodes PSL4, beta-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2. The mRNA is cell-to-cell mobile. calmodulin-binding protein;(source:Araport11) Ipc10G0008010 AT5G56350.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc10G0008000 AT1G55530.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0007980 AT1G55535.3 0 0 transmembrane protein;(source:Araport11) Ipc10G0007970 AT4G26410.1 Uncharacterised conserved protein UCP022280 Encodes a protein predicted to have a 3-stranded helical structure that interacts with both AtRGS1 and AtHXK1 in planta and is required for some glucose-regulated gene expression. chromosome-associated kinesin;(source:Araport11) Ipc10G0007960 AT1G55540.1 Nuclear pore complex protein 0 Nuclear pore complex protein;(source:Araport11) Ipc10G0007950 AT1G55560.1 SKU5 similar 14 0 SKU5 similar 14;(source:Araport11) Ipc10G0007940 AT3G13410.1 0 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;(source:Araport11) Ipc10G0007860 AT3G13400.2 0 0 SKU5 similar 13;(source:Araport11) Ipc10G0007930 AT2G32080.2 purin-rich alpha 1 similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication purin-rich alpha 1;(source:Araport11) Ipc10G0007990 AT1G55535.3 0 0 transmembrane protein;(source:Araport11) Ipc10G0007920 AT4G26410.1 Uncharacterised conserved protein UCP022280 Encodes a protein predicted to have a 3-stranded helical structure that interacts with both AtRGS1 and AtHXK1 in planta and is required for some glucose-regulated gene expression. chromosome-associated kinesin;(source:Araport11) Ipc10G0007910 AT1G55540.1 Nuclear pore complex protein 0 Nuclear pore complex protein;(source:Araport11) Ipc10G0007900 AT3G13400.2 0 0 SKU5 similar 13;(source:Araport11) Ipc10G0007890 AT3G13410.1 0 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;(source:Araport11) Ipc10G0007880 AT3G21820.1 histone-lysine N-methyltransferase ATXR2 0 histone-lysine N-methyltransferase ATXR2;(source:Araport11) Ipc10G0007870 AT3G13400.2 0 0 SKU5 similar 13;(source:Araport11) Ipc10G0007850 AT2G32080.1 purin-rich alpha 1 similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication purin-rich alpha 1;(source:Araport11) Ipc10G0007840 AT1G18850.1 0 PCP2 encodes a novel plant specific protein that is co-expressed with components of pre-rRNA processing complex. Co-localizes with NuGWD1 and SWA1. hypothetical protein;(source:Araport11) Ipc10G0007830 AT4G01610.1 Cysteine proteinases superfamily protein Encodes a capase involved in stress induced cell death. Activity detected in leaf and cell culture. Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0007820 AT1G33330.3 0 0 Class I peptide chain release factor;(source:Araport11) Ipc10G0007810 AT1G33340.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc10G0007800 AT1G33360.1 ATP-dependent Clp protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease;(source:Araport11) Ipc10G0007790 AT4G10260.1 pfkB-like carbohydrate kinase family protein Encodes a member of the fructokinase gene family. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc10G0007780 AT5G44390.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc10G0007770 AT4G10330.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc10G0007760 AT4G10340.1 light harvesting complex of photosystem II 5 photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus The mRNA is cell-to-cell mobile. light harvesting complex of photosystem II 5;(source:Araport11) Ipc10G0007750 AT4G10350.1 NAC domain containing protein 70 NAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root. NAC domain containing protein 70;(source:Araport11) Ipc10G0007740 AT1G33430.1 Galactosyltransferase family protein UPEX1 is arabinogalactan b-(1,3)-galactosyltransferase involved in the formation of pollen exine. Belongs to GT31 family. Mutants have reduced levels of AGPs. Galactosyltransferase family protein;(source:Araport11) Ipc10G0007730 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0007720 AT1G71310.2 cobalt ion binding A protein coding gene with unknown function. The 5’ UTR and the first two exons and introns of this gene overlap with a RNA coding gene TER1. TER1 (GenBank accession no. HQ401284) encodes a putative template sequence (5′-CTAAACCCTA-3′) corresponding to 1.5 copies of the Arabidopsis telomere repeat (PNAS 2011, 108:73-78). cobalt ion binding protein;(source:Araport11) Ipc10G0007710 AT1G33470.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0007700 AT4G10170.2 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc10G0007690 AT4G10150.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0007680 AT1G33490.1 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc10G0007670 AT1G71340.1 PLC-like phosphodiesterases superfamily protein Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc10G0007660 AT5G23530.1 carboxyesterase 18 0 carboxyesterase 18;(source:Araport11) Ipc10G0007650 AT1G71360.1 Galactose-binding protein Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. Galactose-binding protein;(source:Araport11) Ipc10G0007640 AT4G27010.2 0 0 ribosome 60S biogenesis amino-terminal protein;(source:Araport11) Ipc10G0007630 AT2G46290.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0007620 AT1G22880.1 cellulase 5 0 cellulase 5;(source:Araport11) Ipc10G0007610 AT5G66460.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc10G0007600 AT1G22870.1 Protein kinase family protein with ARM repeat domain One of two paralogs in Arabidopsis.Loss of both SCYL2B and SCYL2A results in severe growth defects. kinase family with ARM repeat domain-containing protein;(source:Araport11) Ipc10G0007590 AT3G60780.1 Protein of unknown function (DUF1442) 0 hypothetical protein (DUF1442);(source:Araport11) Ipc10G0007580 AT5G10625.1 0 0 flowering-promoting factor-like protein;(source:Araport11) Ipc10G0007570 AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei. tubulin folding cofactor E / Pfifferling (PFI);(source:Araport11) Ipc10G0007560 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0007550 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc10G0007540 AT2G37270.2 ribosomal protein 5B One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A. ribosomal protein 5B;(source:Araport11) Ipc10G0007530 AT3G49080.1 Ribosomal protein S5 domain 2-like superfamily protein Mitochondrial ribosomal protein, similar to RPS9 from E.coli. Loss of function results in gametophyte lethality, particularly the megagametophyte. Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc10G0007520 AT1G22810.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Overexpression leands to delayed senescence and delayed flowering. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc10G0007510 AT5G17000.1 Zinc-binding dehydrogenase family protein 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc10G0007500 AT2G40890.1 cytochrome P450, family 98, subfamily A, polypeptide 3 encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. cytochrome P450, family 98, subfamily A, polypeptide 3;(source:Araport11) Ipc10G0007490 AT4G10000.2 Thioredoxin family protein 0 Thioredoxin family protein;(source:Araport11) Ipc10G0007480 AT1G59610.1 dynamin-like 3 A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. The mRNA is cell-to-cell mobile. dynamin-like 3;(source:Araport11) Ipc10G0007470 AT1G33800.1 Protein of unknown function (DUF579) Encodes a glucuronoxylan(GX)-specific 4-O-methyltransferase responsible for methylating GlcA residues in GX. Reduced methylation of GX ingxmt1-1 plants is correlated with altered lignin composition. The mRNA is cell-to-cell mobile. glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc10G0007460 AT1G33810.1 0 0 zinc finger/BTB domain protein;(source:Araport11) Ipc10G0007450 AT4G15733.1 SCR-like 11 Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein). SCR-like 11;(source:Araport11) Ipc10G0007440 AT1G71692.1 AGAMOUS-like 12 Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots. AGAMOUS-like 12;(source:Araport11) Ipc10G0007430 AT1G76690.1 12-oxophytodienoate reductase 2 Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2;(source:Araport11) Ipc10G0007420 AT1G76690.1 12-oxophytodienoate reductase 2 Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2;(source:Araport11) Ipc10G0007410 AT1G09640.1 Translation elongation factor EF1B, gamma chain 0 Translation elongation factor EF1B, gamma chain;(source:Araport11) Ipc10G0007400 AT1G09645.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0007390 AT4G09960.6 0 Encodes a MADS box transcription factor expressed in the carpel and ovules. Plays a maternal role in fertilization and seed development. Controls the structure and mechanical properties of the seed coat. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc10G0007380 AT1G33970.5 P-loop containing nucleoside triphosphate hydrolases superfamily protein IAN9 is a member of a small family of proteins. It's expression is repressed upon pathogen infection and loss of function mutants show increased resistance to bacterial pathogens. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0007370 AT4G09900.1 methyl esterase 12 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 12;(source:Araport11) Ipc10G0007360 AT5G11860.5 0 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 5;(source:Araport11) Ipc10G0007350 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0007340 AT1G67430.1 Ribosomal protein L22p/L17e family protein 0 Ribosomal protein L22p/L17e family protein;(source:Araport11) Ipc10G0007330 AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12) 0 Microsomal signal peptidase 12 kDa subunit (SPC12);(source:Araport11) Ipc10G0007320 AT1G67490.1 glucosidase 1 Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER). glucosidase 1;(source:Araport11) Ipc10G0007310 AT1G67510.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0007300 AT1G24330.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0007290 AT3G57810.4 0 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0007280 AT5G43230.1 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc10G0007270 AT5G63400.1 adenylate kinase 1 encodes a protein similar to adenylate kinase. adenylate kinase 1;(source:Araport11) Ipc10G0007260 AT1G67550.1 urease Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation. The mRNA is cell-to-cell mobile. urease;(source:Araport11) Ipc10G0007250 AT1G67570.1 Protein of unknown function (DUF3537) 0 zinc finger CONSTANS-like protein (DUF3537);(source:Araport11) Ipc10G0007240 AT1G67580.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0007230 AT1G67590.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc10G0007220 AT1G67600.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc10G0007210 AT1G27880.1 DEAD/DEAH box RNA helicase family protein 0 DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc10G0007200 AT3G01750.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc10G0007190 AT1G13440.1 glyceraldehyde-3-phosphate dehydrogenase C2 The expression level of GAPC-2 is upregulated in Arabidopsis seedlings exposed to cadmium. glyceraldehyde-3-phosphate dehydrogenase C2;(source:Araport11) Ipc10G0007180 AT1G67690.1 Zincin-like metalloproteases family protein 0 Zincin-like metalloproteases family protein;(source:Araport11) Ipc10G0007170 AT3G26020.6 0 Encodes protein phosphatase 2A (PP2A) B Primeeta subunit. Targeted to nucleus and cytosol. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc10G0007160 AT5G14310.1 carboxyesterase 16 0 carboxyesterase 16;(source:Araport11) Ipc10G0007150 AT1G67700.5 0 0 multidrug resistance protein;(source:Araport11) Ipc10G0007140 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc10G0007130 AT5G14340.1 myb domain protein 40 Member of the R2R3 factor gene family. myb domain protein 40;(source:Araport11) Ipc10G0007120 AT4G27670.1 heat shock protein 21 Encodes Hsp21, a chloroplast located small heat shock protein. A structure model of Hsp21, obtained by homology modeling, single-particle electron microscopy, and lysine-specific chemical crosslinking, shows that the Hsp21 subunits are arranged in two hexameric discs, rotated by 25 degree in relation to each other. heat shock protein 21;(source:Araport11) Ipc10G0007110 AT3G27350.1 0 0 transcriptional regulator ATRX-like protein;(source:Araport11) Ipc10G0007100 AT1G67710.1 response regulator 11 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Affects ABA-JA crosstalk. response regulator 11;(source:Araport11) Ipc10G0007090 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc10G0007080 AT5G37190.2 0 COP1-interacting protein 4, a nuclear-localized positive regulator of arabidopsis photomorphogenesis COP1-interacting protein 4;(source:Araport11) Ipc10G0007070 AT1G67740.1 photosystem II BY PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese. Important for the redox control of cytochrome b559. photosystem II BY;(source:Araport11) Ipc10G0007060 AT3G26100.6 0 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc10G0007050 AT5G23530.1 carboxyesterase 18 0 carboxyesterase 18;(source:Araport11) Ipc10G0007040 AT5G63180.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0007030 AT1G24510.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc10G0007020 AT3G26120.1 terminal EAR1-like 1 Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. terminal EAR1-like 1;(source:Araport11) Ipc10G0007010 AT1G13170.1 OSBP(oxysterol binding protein)-related protein 1D 0 OSBP(oxysterol binding protein)-related protein 1D;(source:Araport11) Ipc10G0007000 AT2G22870.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0006990 AT1G24530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0006980 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc10G0006970 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc10G0006960 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc10G0006950 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc10G0006940 AT5G40580.2 20S proteasome beta subunit PBB2 Encodes 20S proteasome beta subunit PBB2 (PBB2). 20S proteasome beta subunit PBB2;(source:Araport11) Ipc10G0006930 AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein 0 Cellulase (glycosyl hydrolase family 5) protein;(source:Araport11) Ipc10G0006920 AT1G24560.1 0 Effector molecule of the plant-unique RAB5, ARA6. Acts in the vacuolar/endocytic trafficking pathway with canonical RAB5 and SYP. Promotes recruitment of VSP9a onto the endosome, which is required for efficient RAB5 activation. Colocalizes with RAB5 on endosomes, where it coordinates transport with canonical RAB5. paramyosin;(source:Araport11) Ipc10G0006910 AT3G26350.2 0 0 proline-rich receptor-like kinase;(source:Araport11) Ipc10G0006900 AT3G26380.1 Melibiase family protein APSE is a member of the Glycoside Hydrolase (GH27) family that functions as a β-l-arabinopyranosidase. Melibiase family protein;(source:Araport11) Ipc10G0006890 AT1G67810.1 sulfur E2 Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis. The mRNA is cell-to-cell mobile. sulfur E2;(source:Araport11) Ipc10G0006880 AT5G14450.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc10G0006870 AT3G27950.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc10G0006860 AT1G67820.2 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc10G0006850 AT1G67840.1 chloroplast sensor kinase Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II. chloroplast sensor kinase;(source:Araport11) Ipc10G0006840 AT3G09570.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc10G0006830 AT2G28310.3 Protein of unknown function (DUF707) 0 trimethylguanosine synthase (DUF707);(source:Araport11) Ipc10G0006820 AT1G67850.7 0 0 lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11) Ipc10G0006810 AT3G26440.2 Protein of unknown function (DUF707) 0 transmembrane protein, putative (DUF707);(source:Araport11) Ipc10G0006800 AT1G67856.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0006790 AT1G24575.1 0 0 DEAD-box ATP-dependent RNA helicase-like protein;(source:Araport11) Ipc10G0006780 AT1G12990.1 beta-1,4-N-acetylglucosaminyltransferase family protein 0 beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc10G0006770 AT1G67900.6 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc10G0006760 AT1G24590.1 DORNROSCHEN-like Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1. DORNROSCHEN-like protein;(source:Araport11) Ipc10G0006750 AT1G12970.1 plant intracellular ras group-related LRR 3 Encodes PIRL3, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. plant intracellular ras group-related LRR 3;(source:Araport11) Ipc10G0006740 AT3G26510.6 0 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc10G0006730 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0006720 AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase 0 nucleotide-rhamnose synthase/epimerase-reductase;(source:Araport11) Ipc10G0006710 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc10G0006700 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0006690 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc07G0001250 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc07G0001260 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc07G0001270 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0001280 AT5G05470.1 eukaryotic translation initiation factor 2 alpha subunit Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. eukaryotic translation initiation factor 2 alpha subunit;(source:Araport11) Ipc07G0001290 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001300 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001310 AT4G24270.2 EMBRYO DEFECTIVE 140 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 140;(source:Araport11) Ipc07G0000900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001330 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001340 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc07G0001350 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc07G0001360 AT1G40129.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001370 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0001380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0005600 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc15G0005610 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc15G0005620 AT1G31817.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc15G0005630 AT5G18400.3 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis 0 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesi;(source:Araport11) Ipc15G0005640 AT5G45390.1 CLP protease P4 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). The mRNA is cell-to-cell mobile. CLP protease P4;(source:Araport11) Ipc15G0005650 AT1G31840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0005660 AT4G19140.1 0 0 exopolysaccharide production negative regulator;(source:Araport11) Ipc15G0005670 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc15G0005680 ATCG00740.1 RNA polymerase subunit alpha RNA polymerase alpha subunit RNA polymerase subunit alpha;(source:Araport11) Ipc15G0005690 ATCG00710.1 photosystem II reaction center protein H Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII. photosystem II reaction center protein H;(source:Araport11) Ipc15G0005700 AT2G44260.1 Plant protein of unknown function (DUF946) 0 DUF946 family protein (DUF946);(source:Araport11) Ipc15G0005710 AT4G19130.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc15G0005720 AT4G19120.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0005740 AT4G19110.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0005730 AT4G33110.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0005750 AT1G31880.2 0 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with PAX, thereby timing PPSE differentiation. Dampens PIN-mediated auxin efflux. DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein;(source:Araport11) Ipc15G0005760 AT2G47000.7 0 Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation. ATP binding cassette subfamily B4;(source:Araport11) Ipc15G0005770 AT4G19070.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc15G0005780 AT3G07040.1 NB-ARC domain-containing disease resistance protein Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc15G0005790 AT3G13960.1 growth-regulating factor 5 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5;(source:Araport11) Ipc15G0005800 AT4G19040.1 ENHANCED DISEASE RESISTANCE 2 Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion. ENHANCED DISEASE RESISTANCE 2;(source:Araport11) Ipc15G0005810 AT5G45580.2 0 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc15G0005820 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc15G0005830 AT2G20120.2 0 Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles. CONTINUOUS VASCULAR RING protein (DUF502);(source:Araport11) Ipc15G0005840 AT4G19010.1 AMP-dependent synthetase and ligase family protein Encodes for a 4-coumarate-CoA ligase involved in the biosynthesis of the benzenoid ring of ubiquinone from phenylalanine. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc15G0005850 AT4G19010.1 AMP-dependent synthetase and ligase family protein Encodes for a 4-coumarate-CoA ligase involved in the biosynthesis of the benzenoid ring of ubiquinone from phenylalanine. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc15G0005860 AT1G32060.1 phosphoribulokinase 0 phosphoribulokinase;(source:Araport11) Ipc15G0005870 AT1G32050.1 SCAMP family protein 0 SCAMP family protein;(source:Araport11) Ipc15G0005880 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc15G0005890 AT1G31970.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc15G0005900 AT2G35585.1 0 0 cystic fibrosis transmembrane conductance regulator;(source:Araport11) Ipc15G0005910 AT1G31910.1 GHMP kinase family protein 0 GHMP kinase family protein;(source:Araport11) Ipc15G0005920 AT2G35530.1 basic region/leucine zipper transcription factor 16 Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members. basic region/leucine zipper transcription factor 16;(source:Araport11) Ipc15G0005930 AT1G32160.1 Protein of unknown function (DUF760) 0 beta-casein (DUF760);(source:Araport11) Ipc15G0005940 AT3G03050.1 cellulose synthase-like D3 encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. cellulose synthase-like D3;(source:Araport11) Ipc15G0005950 AT3G03050.1 cellulose synthase-like D3 encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. cellulose synthase-like D3;(source:Araport11) Ipc15G0005960 AT1G32190.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0005970 AT5G37020.1 auxin response factor 8 Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167. auxin response factor 8;(source:Araport11) Ipc15G0005980 AT3G22270.1 Topoisomerase II-associated protein PAT1 0 Topoisomerase II-associated protein PAT1;(source:Araport11) Ipc15G0005990 AT4G15000.1 Ribosomal L27e protein family 0 Ribosomal L27e protein family;(source:Araport11) Ipc15G0006000 AT3G22210.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0006010 AT4G15080.2 0 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc15G0006020 AT3G51560.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0006030 AT3G22170.2 far-red elongated hypocotyls 3 A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. far-red elongated hypocotyls 3;(source:Araport11) Ipc15G0006040 AT5G50390.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc15G0006050 AT1G05300.1 zinc transporter 5 precursor member of Fe(II) transporter isolog family zinc transporter 5 precursor;(source:Araport11) Ipc15G0006060 AT4G16330.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc15G0006070 AT3G03340.1 LUC7 related protein 0 LUC7 related protein;(source:Araport11) Ipc15G0006080 AT1G65430.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc15G0006090 AT1G65420.1 Protein of unknown function (DUF565) Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq6. antigen receptor-like protein (DUF565);(source:Araport11) Ipc15G0006100 AT2G40070.3 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc15G0006110 AT1G65620.5 0 required for formation of a symmetric flat leaf lamina, encodes a member of a family of proteins characterized by cysteine repeats and a leucine zipper; involved in KNOX gene regulation. Acts together with ASL1 in proximal-distal symmetry determination. Forms a complex with AS1 that binds to the BP promoter and leads to silencing of BP. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc15G0006120 AT1G65610.1 Six-hairpin glycosidases superfamily protein 0 Six-hairpin glycosidases superfamily protein;(source:Araport11) Ipc15G0006130 AT1G65590.1 beta-hexosaminidase 3 Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane. beta-hexosaminidase 3;(source:Araport11) Ipc15G0006140 AT1G65580.1 Endonuclease/exonuclease/phosphatase family protein 0 Endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc15G0006150 AT1G65560.1 Zinc-binding dehydrogenase family protein 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc15G0006160 AT5G16270.1 sister chromatid cohesion 1 protein 4 Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin. Plays a role in somatic DNA double strand break damage repair. The mRNA is cell-to-cell mobile. sister chromatid cohesion 1 protein 4;(source:Araport11) Ipc15G0006170 AT5G16270.1 sister chromatid cohesion 1 protein 4 Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin. Plays a role in somatic DNA double strand break damage repair. The mRNA is cell-to-cell mobile. sister chromatid cohesion 1 protein 4;(source:Araport11) Ipc15G0006180 AT5G16490.1 ROP-interactive CRIB motif-containing protein 4 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. ROP-interactive CRIB motif-containing protein 4;(source:Araport11) Ipc15G0006190 AT3G07860.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc15G0006200 AT5G36170.1 high chlorophyll fluorescent 109 Required for normal processing of polycistronic plastidial transcripts high chlorophyll fluorescent 109;(source:Araport11) Ipc15G0006210 AT3G02830.1 zinc finger protein 1 Encodes a zinc finger protein that binds to PORA mRNA in vivo and recruits the Pfr form of phytochrome to the 5′-UTR of PORA mRNA to regulate translation of the mRNA. zinc finger protein 1;(source:Araport11) Ipc15G0006220 AT3G02800.1 Tyrosine phosphatase family protein Encodes an atypical dual-specificity phosphatase. Tyrosine phosphatase family protein;(source:Araport11) Ipc15G0006230 AT5G16440.1 isopentenyl diphosphate isomerase 1 Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. isopentenyl diphosphate isomerase 1;(source:Araport11) Ipc15G0006240 AT1G32490.1 RNA helicase family protein Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. RNA helicase family protein;(source:Araport11) Ipc15G0006250 AT5G36230.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0006260 AT1G76810.1 eukaryotic translation initiation factor 2 (eIF-2) family protein 0 eukaryotic translation initiation factor 2 (eIF-2) family protein;(source:Araport11) Ipc15G0006270 AT3G02750.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc15G0006280 AT1G05840.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0006290 AT3G14290.1 20S proteasome alpha subunit E2 Encodes 20S proteasome subunit PAE2 (PAE2) that has RNase activity. 20S proteasome alpha subunit E2;(source:Araport11) Ipc15G0006300 AT1G75860.1 0 0 DNA ligase;(source:Araport11) Ipc15G0006310 AT1G79610.1 Na+/H+ antiporter 6 Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity. Na+/H+ antiporter 6;(source:Araport11) Ipc15G0006320 AT5G16530.1 Auxin efflux carrier family protein Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis. Auxin efflux carrier family protein;(source:Araport11) Ipc15G0006330 AT5G16520.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0006350 AT5G16510.2 Alpha-1,4-glucan-protein synthase family protein RGP5 is a member of the reversably-glycosylated family of proteins. Analyses using tagged RGP5 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP5 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP5 can form complexes with RGP1 and RGP2. Alpha-1,4-glucan-protein synthase family protein;(source:Araport11) Ipc15G0006340 AT4G30390.1 0 0 UDP-arabinopyranose mutase;(source:Araport11) Ipc15G0006360 AT3G07020.2 UDP-Glycosyltransferase superfamily protein encodes a 3beta-hydroxy sterol UDP-glucosyltransferase. ugt80a2 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels and reduced seed size. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0006370 AT2G48070.2 resistance to phytophthora 1 Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae. resistance to phytophthora 1;(source:Araport11) Ipc15G0006380 AT5G08790.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc15G0006390 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0006400 AT5G18450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0006410 AT3G04160.3 0 0 U11/U12 small nuclear ribonucleoprotein;(source:Araport11) Ipc15G0006420 AT5G08790.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc15G0006430 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0006440 AT3G04260.1 plastid transcriptionally active 3 0 plastid transcriptionally active 3;(source:Araport11) Ipc15G0006450 AT5G18460.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal peptidase (DUF239);(source:Araport11) Ipc15G0006460 AT1G13810.1 Restriction endonuclease, type II-like superfamily protein 0 Restriction endonuclease, type II-like superfamily protein;(source:Araport11) Ipc15G0006470 AT1G08600.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein The Arabidopsis ATRX harbours a N-terminal ADD domain and a C-terminal helicase domain and is devoid of the large central region involved in DAXX interaction in mammals. Arabidopsis ATRX mutant alleles are viable, but with reduced fertility. Their combination with mutants for the H3.3 chaperone HIRA impairs plant survival. ATRX loss affects cellular histone H3.3 pools and modulates the H3.1/H3.3 balance. Notably, at a genome-wide scale, loss of ATRX leads to a reduced H3.3 level at genes characterized by elevated H3.3 occupancy and high expression, including the 45S ribosomal DNA (45S rDNA) loci. Indeed, expression of specific 45S rDNA sequence variants is altered by ATRX loss (DOI:10.1105/tpc.16.00877) P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0006480 AT2G13350.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc15G0006490 AT3G04370.2 plasmodesmata-located protein 4 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. plasmodesmata-located protein 4;(source:Araport11) Ipc15G0006500 AT2G35800.1 mitochondrial substrate carrier family protein Encodes a predicted calcium-dependent S-adenosyl methionine carrier. mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0006510 AT3G53580.1 diaminopimelate epimerase family protein 0 diaminopimelate epimerase family protein;(source:Araport11) Ipc15G0006520 AT1G78810.3 0 0 hypothetical protein;(source:Araport11) Ipc15G0006530 AT1G07900.1 LOB domain-containing protein 1 0 LOB domain-containing protein 1;(source:Araport11) Ipc15G0006540 AT3G10690.1 DNA GYRASE A Encodes a protein that when expressed together with GYRB2 generates an active supercoiling DNA gyrase enzyme that shares similar properties to its bacterial counterpart, including sensitivity to gyrase-specific antibiotics. DNA GYRASE A;(source:Araport11) Ipc15G0006550 AT2G35830.2 0 0 ureidoglycolate hydrolase;(source:Araport11) Ipc15G0006560 AT5G51960.2 0 0 complex 1 protein, LYR family protein;(source:Araport11) Ipc15G0006570 AT3G09670.2 Tudor/PWWP/MBT superfamily protein PWWP domain protein involved in regulation of FLC and flowering time. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc15G0006580 AT5G13610.1 Protein of unknown function (DUF155) Encodes a mitochondria-localized protein involved in ABI4-mediated mitochondrial retrograde signalling. sporulation RMD1-like protein, putative (DUF155);(source:Araport11) Ipc15G0006590 AT2G28550.1 related to AP2.7 0 related to AP2.7;(source:Araport11) Ipc15G0006600 AT5G13520.1 peptidase M1 family protein 0 peptidase M1 family protein;(source:Araport11) Ipc15G0006610 AT3G55005.1 tonneau 1b (TON1b) Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1B appears to be redundant with TON1A. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1B associates with plant centrin CEN1. tonneau 1b (TON1b);(source:Araport11) Ipc15G0006620 AT4G10090.1 elongator protein 6 0 elongator protein 6;(source:Araport11) Ipc15G0006630 AT1G31860.3 0 encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities. histidine biosynthesis bifunctional protein (HISIE);(source:Araport11) Ipc15G0006640 AT5G02800.1 Protein kinase superfamily protein Encodes CDL1, a homolog of CDG1. CDL1 positively regulates brassinosteroid signaling and plant growth. Protein kinase superfamily protein;(source:Araport11) Ipc15G0006650 AT3G55020.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc15G0006660 AT3G55030.1 phosphatidylglycerolphosphate synthase 2 Encodes a phosphatidylglycerolphosphate synthase. phosphatidylglycerolphosphate synthase 2;(source:Araport11) Ipc15G0006670 AT3G54960.1 PDI-like 1-3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. PDI-like 1-3;(source:Araport11) Ipc15G0006680 AT3G01390.4 0 Subunit G of the vacuolar membrane ATPAse complex vacuolar membrane ATPase 10;(source:Araport11) Ipc15G0006690 AT3G54950.1 patatin-like protein 6 Encodes pPLAIIIbeta, a member of the Group 3 patatin-related phospholipases. pPLAIIIbeta hydrolyzes phospholipids and galactolipids and additionally has acyl-CoA thioesterase activity. Alterations of pPLAIIIβ result in changes in lipid levels and composition. patatin-like protein 6;(source:Araport11) Ipc15G0006700 AT2G37150.15 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0006710 AT3G07990.1 serine carboxypeptidase-like 27 0 serine carboxypeptidase-like 27;(source:Araport11) Ipc15G0006720 AT3G52250.2 0 PWR Encodes a SANT domain containing protein. It promotes expression of CRC, and MIR172a, b, and d to promote floral meristem determinacy.It interacts with HDA9 and has similar effects on H3K9 and H3K14methylation The mRNA is cell-to-cell mobile. Involved in controlling seeds germination under HT through histone acetylation modification and H2A.Z deposition. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc15G0006730 AT3G52270.1 Transcription initiation factor IIF, beta subunit 0 Transcription initiation factor IIF, beta subunit;(source:Araport11) Ipc15G0006740 AT5G50840.1 0 0 alpha-taxilin-like protein;(source:Araport11) Ipc15G0006750 AT4G22720.2 Actin-like ATPase superfamily protein 0 Actin-like ATPase superfamily protein;(source:Araport11) Ipc15G0006760 AT2G35790.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0006770 AT2G28380.1 dsRNA-binding protein 2 Encodes a cytoplasmic dsRNA-binding protein DRB2. A maternally expressed imprinted gene. DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels. dsRNA-binding protein 2;(source:Araport11) Ipc15G0006780 AT3G49645.1 0 0 FAD-binding protein;(source:Araport11) Ipc15G0006790 AT4G30080.1 auxin response factor 16 Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus. auxin response factor 16;(source:Araport11) Ipc15G0006800 AT4G14145.1 0 0 cytochrome C oxidase assembly protein;(source:Araport11) Ipc15G0006810 AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc15G0006820 AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc15G0006830 AT2G36230.1 Aldolase-type TIM barrel family protein Encodes a BBMII isomerase involved in histidine biosynthesis. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc15G0006840 AT5G03900.2 Iron-sulphur cluster biosynthesis family protein 0 Iron-sulfur cluster biosynthesis family protein;(source:Araport11) Ipc15G0006850 AT4G27010.2 0 0 ribosome 60S biogenesis amino-terminal protein;(source:Araport11) Ipc15G0006860 AT1G53390.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0006870 AT4G30160.2 villin 4 Encodes a major actin filament bundling protein that is involved in root hair growth through regulating actin organization in a Ca2+-dependent manner. villin 4;(source:Araport11) Ipc15G0006880 AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0006890 AT3G54850.1 plant U-box 14 Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. plant U-box 14;(source:Araport11) Ipc15G0006900 AT2G39140.1 pseudouridine synthase family protein Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins. pseudouridine synthase family protein;(source:Araport11) Ipc15G0006910 AT3G10380.1 subunit of exocyst complex 8 Subunit of the Putative Arabidopsis Exocyst Complex subunit of exocyst complex 8;(source:Araport11) Ipc15G0006920 AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein;(source:Araport11) Ipc15G0006930 AT1G30670.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0006940 AT3G54940.2 Papain family cysteine protease 0 Papain family cysteine protease;(source:Araport11) Ipc15G0006950 AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b), AT5G04280 (AtRZ-1c). It also, along with AtRZ-1b, plays important roles in plant development, pre- mRNA splicing, and general gene expression. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc15G0006960 AT2G28120.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0006970 AT5G04320.3 0 Encodes a protein that protects meiotic centromere cohesion. Shugoshin C terminus;(source:Araport11) Ipc15G0006980 AT5G04390.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc15G0006990 AT5G58330.1 lactate/malate dehydrogenase family protein 0 lactate/malate dehydrogenase family protein;(source:Araport11) Ipc15G0007000 AT5G04430.1 binding to TOMV RNA 1L (long form) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication. binding to TOMV RNA 1L (long form);(source:Araport11) Ipc15G0007010 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc15G0007020 AT5G04460.6 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0007030 AT3G10520.1 haemoglobin 2 Encodes a class 2 non-symbiotic hemoglobin. Over-expression of AHb2 in seeds led to a 40% increase in the total fatty acid content of developing and mature seeds in three subsequent generations. This was mainly due to an increase in the poly-unsaturated C18:2 (omega-6) linoleic and C18:3 (omega-3) alpha-linolenic acids. hemoglobin 2;(source:Araport11) Ipc15G0007040 AT3G52180.1 dual specificity protein phosphatase (DsPTP1) family protein Encodes a plant-specific glucan phosphatase that contains a noncatalytic carbohydrate-binding module as well as a dual specificity protein phosphatase domain. SEX4 can dephosphorylate C6- and C3-glucosyl residues on native starch grains and related maltodextrin compounds in vitro. This protein interacts with the plant SnRK AKIN11, binds starch, and is localized in the chloroplast. sex4 mutants have elevated levels of starch. dual specificity protein phosphatase (DsPTP1) family protein;(source:Araport11) Ipc15G0007050 AT3G52190.1 phosphate transporter traffic facilitator1 Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphate transporter traffic facilitator1;(source:Araport11) Ipc15G0007060 AT5G04490.1 vitamin E pathway gene 5 Encodes a protein with phytol kinase activity involved in tocopherol biosynthesis. phytol kinase 1 VTE5;(source:Araport11) Ipc15G0007070 AT5G04500.1 glycosyltransferase family protein 47 Encodes a member of the CAZy Glycosyltransferase Family 64 that is involved in glycosylinositolphosphorylceramide and sphingolipid glycosylation. In mutants, seed germination was less sensitive to salt stress than in wild-type plants. [The protein was expected to be Golgi-localized based on function as well as the Golgi localization of its homolog GMT1. However, GFP-fusion proteins localized both to the ER and Golgi, and especially to ER when co-expressed with Golgi markers. Therefore, localization cannot confidently be defined. (pers. communication, J. Mortimer)] glycosyltransferase family protein 47;(source:Araport11) Ipc15G0007080 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc15G0007090 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc15G0007100 AT1G19110.1 inter-alpha-trypsin inhibitor heavy chain-related 0 inter-alpha-trypsin inhibitor heavy chain-like protein;(source:Araport11) Ipc15G0007110 AT1G23070.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc15G0007120 AT1G19130.1 0 0 RmlC-like jelly roll fold protein;(source:Araport11) Ipc15G0007130 AT1G19140.1 0 0 ubiquinone biosynthesis COQ9-like protein;(source:Araport11) Ipc15G0007140 AT3G42880.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0007150 AT3G42950.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc15G0007160 AT1G19180.3 0 JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. JAZ1 interacts with MYB21/MYB24, the WD-repeat/bHLH/MYB complex and IIId bHLH factors (bHLH3, bHLH13, bHLH14 and bHLH17) to regulate jasmonate responses, including stamen development, trichome initiation, anthocyanin accumulation and plant defense.The mRNA is cell-to-cell mobile. jasmonate-zim-domain protein 1;(source:Araport11) Ipc15G0007170 AT3G25940.1 TFIIB zinc-binding protein 0 TFIIB zinc-binding protein;(source:Araport11) Ipc15G0007180 AT1G19210.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0007190 AT5G20710.1 beta-galactosidase 7 0 beta-galactosidase 7;(source:Araport11) Ipc15G0007200 ATCG00120.1 ATP synthase subunit alpha Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. ATP synthase subunit alpha;(source:Araport11) Ipc15G0007210 AT2G34357.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0007220 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc15G0007230 AT1G62310.1 transcription factor jumonji (jmjC) domain-containing protein 0 transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc15G0007240 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc15G0007250 AT3G43120.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0007260 AT1G72430.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0007270 AT3G43190.2 0 Encodes a protein with sucrose synthase activity (SUS4). sucrose synthase 4;(source:Araport11) Ipc15G0007280 AT3G43210.5 0 Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. ATP binding microtubule motor family protein;(source:Araport11) Ipc15G0007290 AT4G33250.1 eukaryotic translation initiation factor 3K Encodes initiation factor 3k (EIF3k). eukaryotic translation initiation factor 3K;(source:Araport11) Ipc15G0007300 AT5G20840.1 Phosphoinositide phosphatase family protein 0 Phosphoinositide phosphatase family protein;(source:Araport11) Ipc15G0007310 AT4G33240.5 0 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant. 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A;(source:Araport11) Ipc15G0007320 AT5G20850.1 RAS associated with diabetes protein 51 Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation. Also involved in defense gene transcription during plant immune responses. RAS associated with diabetes protein 51;(source:Araport11) Ipc15G0007330 AT5G20860.2 0 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc15G0007340 AT2G26450.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc15G0007350 AT4G33150.4 0 This is a splice variant of the LKR/SDH locus. It encodes a bifunctional polypeptide lysine-ketoglutarate reductase and saccharopine dehydrogenase involved in lysine degradation. There is another splice variant that encodes a mono saccharopine dehydrogenase protein. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation. lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme;(source:Araport11) Ipc15G0007360 AT4G33140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc15G0007370 AT2G26210.7 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc15G0007380 AT3G13040.3 0 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc15G0007390 AT3G20240.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0007400 AT1G78895.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc15G0007410 AT3G20250.3 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. APUM5 is involved in susceptibility to CMV and is not required for bacterial or fungal pathogen resistance although its expression is induced upon bacterial and fungal infection. It is involved in the osmotic, salt, and drought stress responses. pumilio 5;(source:Araport11) Ipc15G0007420 AT3G20260.1 Protein of unknown function (DUF1666) 0 DUF1666 family protein (DUF1666);(source:Araport11) Ipc15G0007430 AT5G20710.1 beta-galactosidase 7 0 beta-galactosidase 7;(source:Araport11) Ipc15G0007440 AT1G78900.2 vacuolar ATP synthase subunit A Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. The mRNA is cell-to-cell mobile. vacuolar ATP synthase subunit A;(source:Araport11) Ipc15G0007450 AT5G20710.1 beta-galactosidase 7 0 beta-galactosidase 7;(source:Araport11) Ipc15G0007460 AT2G03070.1 mediator subunit 8 Encodes a subunit of the Mediator complex. Regulates plant defense and flowering. mediator subunit 8;(source:Araport11) Ipc15G0007470 AT5G15240.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc15G0007480 AT1G50440.3 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc15G0007490 AT4G30010.1 0 0 ATP-dependent RNA helicase;(source:Araport11) Ipc15G0007500 AT1G16860.1 Ubiquitin-specific protease family C19-related protein Plasma membrane-localized proteins that negatively regulate cellulose synthesis by inhibiting the exocytosis of CESAs. Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc15G0007510 AT1G51550.1 Kelch repeat-containing F-box family protein 0 Kelch repeat-containing F-box family protein;(source:Araport11) Ipc15G0007520 AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc15G0007530 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc15G0007540 AT1G51580.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc15G0007550 AT1G51590.1 alpha-mannosidase 1 Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation. alpha-mannosidase 1;(source:Araport11) Ipc15G0007560 AT1G51610.1 Cation efflux family protein 0 Cation efflux family protein;(source:Araport11) Ipc15G0007570 AT3G13580.9 0 0 Ribosomal protein L30/L7 family protein;(source:Araport11) Ipc15G0007580 AT3G21180.1 autoinhibited Ca(2+)-ATPase 9 one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain. autoinhibited Ca(2+)-ATPase 9;(source:Araport11) Ipc15G0007590 AT3G21190.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc15G0007600 AT1G51650.1 ATP synthase epsilon chain, mitochondrial 0 ATP synthase epsilon chain;(source:Araport11) Ipc15G0007610 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc15G0007620 AT1G17745.1 D-3-phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase The mRNA is cell-to-cell mobile. D-3-phosphoglycerate dehydrogenase;(source:Araport11) Ipc15G0007630 AT3G21220.2 0 Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles. MAP kinase kinase 5;(source:Araport11) Ipc15G0007640 AT1G53710.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc15G0007650 AT3G14350.1 STRUBBELIG-receptor family 7 0 STRUBBELIG-receptor family 7;(source:Araport11) Ipc15G0007660 AT1G53750.1 regulatory particle triple-A 1A 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, regulatory particle triple-A 1A;(source:Araport11) Ipc15G0007670 AT1G53750.1 regulatory particle triple-A 1A 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA, regulatory particle triple-A 1A;(source:Araport11) Ipc15G0007680 AT1G17270.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc15G0007690 AT1G72310.1 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3). RING/U-box superfamily protein;(source:Araport11) Ipc15G0007700 AT1G17280.9 0 Group XIV ubiquitin-conjugating enzyme that functions negative regulation of drought stress. ubiquitin-conjugating enzyme 34;(source:Araport11) Ipc15G0007710 AT3G14310.1 pectin methylesterase 3 encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism. pectin methylesterase 3;(source:Araport11) Ipc15G0007720 AT1G50430.1 Ergosterol biosynthesis ERG4/ERG24 family Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype. Ergosterol biosynthesis ERG4/ERG24 family;(source:Araport11) Ipc15G0007730 AT1G53860.1 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc15G0007740 AT4G21120.1 amino acid transporter 1 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. The mRNA is cell-to-cell mobile. amino acid transporter 1;(source:Araport11) Ipc15G0007750 AT1G53910.3 related to AP2 12 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. It plays a key role in controlling root bending in response to hypoxia. related to AP2 12;(source:Araport11) Ipc15G0007760 AT1G53920.1 GDSL-motif lipase 5 Contains lipase signature motif and GDSL domain. GDSL-motif lipase 5;(source:Araport11) Ipc15G0007770 AT3G28860.1 ATP binding cassette subfamily B19 Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. ATP binding cassette subfamily B19;(source:Araport11) Ipc15G0007780 AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein 0 2-oxoglutarate-dependent dioxygenase family protein;(source:Araport11) Ipc15G0007790 AT1G74960.3 fatty acid biosynthesis 1 Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0. fatty acid biosynthesis 1;(source:Araport11) Ipc15G0007800 AT3G14130.3 0 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc15G0007810 AT5G64816.4 0 Thionin-like gene. thionin-like protein;(source:Araport11) Ipc15G0007820 AT2G30250.1 WRKY DNA-binding protein 25 member of WRKY Transcription Factor; Group I. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. WRKY DNA-binding protein 25;(source:Araport11) Ipc15G0007830 AT3G14120.2 0 0 nuclear pore complex protein;(source:Araport11) Ipc15G0007840 AT1G17370.1 oligouridylate binding protein 1B Encodes an RNA–binding protein involved in stress granule formation. Regulated by a transposable element small RNA. oligouridylate binding protein 1B;(source:Araport11) Ipc15G0007850 AT1G74950.1 TIFY domain/Divergent CCT motif family protein 0 TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc15G0007860 AT1G17630.2 0 Encodes a PPR protein involved in mitochondrial functioning. Mutants suppress cell wall defects caused by C17 chemical inhibitor. Mutants are defective in cytochrome c maturation and activation of mitochondrial retrograde signalling. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc15G0007870 AT3G14080.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc15G0007880 AT1G17410.1 Nucleoside diphosphate kinase family protein 0 Nucleoside diphosphate kinase family protein;(source:Araport11) Ipc15G0007890 AT1G72560.7 0 Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. ARM repeat superfamily protein;(source:Araport11) Ipc15G0007900 AT1G72620.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0007910 AT1G54150.1 E3 Ubiquitin ligase family protein Encodes a chloroplast-localized putative RING-type ubiquitin E3 ligase. E3 Ubiquitin ligase family protein;(source:Araport11) Ipc15G0007920 AT3G13840.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc15G0007930 AT5G20630.1 germin 3 Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation. germin 3;(source:Araport11) Ipc15G0007940 AT1G72600.2 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0007950 AT1G17455.2 ELF4-like 4 0 ELF4-like 4;(source:Araport11) Ipc15G0007960 AT3G42790.1 alfin-like 3 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 3;(source:Araport11) Ipc15G0007970 AT1G72820.2 0 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0007980 AT1G17540.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc15G0007990 AT1G72740.2 Homeodomain-like/winged-helix DNA-binding family protein Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc15G0008010 AT3G13900.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Encodes a member of the P4 subfamily of P-type ATPases expressed in the pollen plasma membrane. Double mutants with ALA6 display pollen and pollen tube defects. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc15G0008000 AT3G13910.2 0 0 hypothetical protein (DUF3511);(source:Araport11) Ipc15G0008020 AT3G53720.1 cation/H+ exchanger 20 member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells. cation/H+ exchanger 20;(source:Araport11) Ipc15G0008030 AT3G13890.2 myb domain protein 26 Encodes a putative transcription factor (MYB26). myb domain protein 26;(source:Araport11) Ipc15G0008040 AT1G17640.3 0 Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0008050 AT3G13790.2 Glycosyl hydrolases family 32 protein Encodes a protein with invertase activity. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc15G0008060 AT3G13800.4 0 0 Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc15G0008070 AT3G13810.4 0 0 indeterminate(ID)-domain 11;(source:Araport11) Ipc15G0008080 AT3G13850.1 LOB domain-containing protein 22 0 LOB domain-containing protein 22;(source:Araport11) Ipc15G0008090 AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc15G0008100 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0008120 AT3G13300.2 Transducin/WD40 repeat-like superfamily protein Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0008140 AT4G29080.1 phytochrome-associated protein 2 phytochrome-associated protein 2 (PAP2) phytochrome-associated protein 2;(source:Araport11) Ipc15G0008150 AT3G05110.1 Domain of unknown function (DUF3444) 0 early endosome antigen-like protein, putative (DUF3444);(source:Araport11) Ipc15G0008110 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0008130 AT3G13300.2 Transducin/WD40 repeat-like superfamily protein Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0008160 AT3G11920.1 glutaredoxin-related 0 glutaredoxin-like protein;(source:Araport11) Ipc15G0008170 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0008180 AT5G56890.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0008190 AT1G17665.1 0 0 CA-responsive protein;(source:Araport11) Ipc15G0008200 AT3G13750.1 beta galactosidase 1 beta-galactosidase, glycosyl hydrolase family 35 The mRNA is cell-to-cell mobile. beta galactosidase 1;(source:Araport11) Ipc15G0008210 AT1G55160.1 0 0 WAS/WASL-interacting family protein;(source:Araport11) Ipc15G0008220 AT3G13730.2 0 Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3). cytochrome P450, family 90, subfamily D, polypeptide 1;(source:Araport11) Ipc15G0008230 AT3G13730.1 cytochrome P450, family 90, subfamily D, polypeptide 1 Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3). cytochrome P450, family 90, subfamily D, polypeptide 1;(source:Araport11) Ipc15G0008240 AT1G55170.1 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc15G0008250 AT4G26160.1 atypical CYS HIS rich thioredoxin 1 Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. atypical CYS HIS rich thioredoxin 1;(source:Araport11) Ipc15G0008260 AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc15G0008270 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc15G0008280 AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55 type 2A protein serine/threonine phosphatase 55 kDa B Protein phosphatase 2A, regulatory subunit PR55;(source:Araport11) Ipc15G0008290 AT1G51700.1 DOF zinc finger protein 1 Encodes dof zinc finger protein (adof1). The mRNA is cell-to-cell mobile. DOF zinc finger protein 1;(source:Araport11) Ipc15G0008300 AT3G21290.1 dentin sialophosphoprotein-related 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc15G0008310 AT2G19730.3 Ribosomal L28e protein family 0 Ribosomal L28e protein family;(source:Araport11) Ipc15G0008320 AT3G21295.3 0 Pro-Trp-Pro-Trp repeat protein. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc15G0008330 AT1G26370.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc15G0008340 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc15G0008350 AT3G21300.1 RNA methyltransferase family protein 0 RNA methyltransferase family protein;(source:Araport11) Ipc15G0008360 AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0008370 AT2G28970.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0008380 AT4G29990.1 Leucine-rich repeat transmembrane protein kinase protein 0 Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11) Ipc15G0008390 AT4G29990.1 Leucine-rich repeat transmembrane protein kinase protein 0 Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11) Ipc15G0008400 AT4G29990.1 Leucine-rich repeat transmembrane protein kinase protein 0 Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11) Ipc15G0008410 AT5G44680.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc15G0008420 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc15G0008430 AT5G50340.2 0 0 DNA repair protein RadA-like protein;(source:Araport11) Ipc15G0008440 AT4G26270.1 phosphofructokinase 3 0 phosphofructokinase 3;(source:Araport11) Ipc15G0008450 AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc15G0008460 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc15G0008470 AT4G32850.6 nuclear poly(a) polymerase Encodes a nuclear poly(A) polymerase. Located in the nucleus. The mRNA is cell-to-cell mobile. nuclear poly(a) polymerase;(source:Araport11) Ipc15G0008480 AT4G29130.1 hexokinase 1 Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment. hexokinase 1;(source:Araport11) Ipc15G0008490 AT3G16500.1 phytochrome-associated protein 1 phytochrome-associated protein 1 (PAP1) phytochrome-associated protein 1;(source:Araport11) Ipc15G0008500 AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity.It is required for the suppression of defense responses in absence of pathogen infection or upon abscisic acid treatment. Loss-of-function mutants display enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum. Its expression is repressed by pathogen infection and biological elicitors and is induced abscisic acid.Expression is strongly repressed by elicitors and fungal infection, and is induced by the hormone abscisic acid (ABA). Insertional mutants show increased expression of PHYTOALEXIN-DEFICIENT 3 (PAD3), enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum infection and reduced physiological responses to ABA, suggesting that LYK3 is important for the cross-talk between signaling pathways activated by ABA and pathogens (PMID:24639336). protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc15G0008510 AT5G48120.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0008520 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc15G0008530 AT3G16350.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc15G0008540 AT1G59870.1 ABC-2 and Plant PDR ABC-type transporter family protein ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance. The mRNA is cell-to-cell mobile. ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) Ipc15G0008550 AT2G25760.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Protein kinase family protein;(source:Araport11) Ipc15G0008560 AT1G52140.1 0 0 Avr9/Cf-9 rapidly elicited protein;(source:Araport11) Ipc06G0017350 AT5G04820.1 ovate family protein 13 0 ovate family protein 13;(source:Araport11) Ipc06G0017360 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc06G0017370 AT5G22220.2 E2F transcription factor 1 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. E2F transcription factor 1;(source:Araport11) Ipc06G0017380 AT5G46070.1 Guanylate-binding family protein 0 Guanylate-binding family protein;(source:Araport11) Ipc06G0017390 AT2G27285.1 Coiled-coil domain-containing protein 55 (DUF2040) 0 nuclear speckle splicing regulatory-like protein (DUF2040);(source:Araport11) Ipc06G0017400 AT5G04670.2 0 Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing. Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc06G0017410 AT3G52500.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0017420 AT3G11660.1 NDR1/HIN1-like 1 encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive. NDR1/HIN1-like 1;(source:Araport11) Ipc06G0017430 AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc06G0017440 AT2G27250.2 CLAVATA3 One of the three CLAVATA genes controlling the size of the shoot apical meristem (SAM) in Arabidopsis. Belongs to a large gene family called CLE for CLAVATA3/ESR-related. Encodes a stem cell-specific protein CLV3 presumed to be a precursor of a secreted peptide hormone. The deduced ORF encodes a 96-amino acid protein with an 18-amino acid N-terminal signal peptide. The functional form of CLV3 (MCLV3) was first reported to be a posttranscriptionally modified 12-amino acid peptide, in which two of the three prolines were modified to hydroxyproline (Ito et al., Science 2006, 313:842; Kondo et al., Science 2006, 313:845). Ohyama et al. (2009) later reported that the active mature CLV3 is a 13-amino-acid arabinosylated glycopeptide (Nature Chemical Biology, 5:578). CLV3 binds the ectodomain of the CLAVATA1 (CLV1) receptor-kinase. Regulates shoot and floral meristem development. Required for CLAVATA1 receptor-like kinase assembly into a signaling complex that includes KAPP and a Rho-related protein. It restricts its own domain of expression, the central zone (CZ) of the shoot apical meristem (SAM), by preventing differentiation of peripheral zone cells, which surround the CZ, into CZ cells and restricts overall SAM size by a separate, long-range effect on cell division rate. CLE domain of CLV3 is sufficient for function. Results obtained from whole seedlings challenge the concept that the immune receptor FLS2 perceives the meristematic regulatory peptide CLV3p in mesophyll, seedlings, and SAM cells and that CLV3p contributes to SAM immunity against bacterial infection (PMID:22923673). CLAVATA3;(source:Araport11) Ipc06G0017450 AT1G05750.2 0 Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017460 AT5G17830.2 0 0 Plasma-membrane choline transporter family protein;(source:Araport11) Ipc06G0017330 AT4G22620.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc06G0017470 AT2G27230.2 transcription factor-related Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. transcription factor-like protein;(source:Araport11) Ipc06G0017490 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc06G0017500 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0017510 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc06G0017520 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc06G0017530 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0017540 AT1G79940.3 DnaJ / Sec63 Brl domains-containing protein J domain protein localized in ER membrane. Mutants have defective pollen germination. DnaJ / Sec63 Brl domains-containing protein;(source:Araport11) Ipc06G0017550 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc06G0017570 AT4G30890.3 ubiquitin-specific protease 24 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 24;(source:Araport11) Ipc06G0017560 AT1G24485.2 0 0 ER protein carbohydrate-binding protein;(source:Araport11) Ipc06G0017580 AT4G11770.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0001000 AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0000980 AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc02G0000960 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000940 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc14G0000780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000930 AT1G01580.2 0 Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. ferric reduction oxidase 2;(source:Araport11) Ipc02G0000920 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc02G0000910 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000890 AT2G39380.1 exocyst subunit exo70 family protein H2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H2;(source:Araport11) Ipc02G0000880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000870 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000860 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0000850 AT5G23390.1 Plant protein of unknown function (DUF639) 0 polygalacturonase inhibitor (DUF639);(source:Araport11) Ipc02G0000840 AT1G22650.1 Plant neutral invertase family protein 0 Plant neutral invertase family protein;(source:Araport11) Ipc02G0000830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000820 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc04G0029550 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc04G0029560 AT4G32560.4 0 0 paramyosin-like protein;(source:Araport11) Ipc04G0029570 AT4G32570.2 0 0 TIFY domain protein 8;(source:Araport11) Ipc04G0029580 AT5G11310.1 Pentatricopeptide repeat (PPR) superfamily protein The SOAR1 gene encodes a pentatricopeptide repeat (PPR) protein which localizes to both the cytosol and nucleus. Down-regulation of SOAR1 strongly enhances, but up-regulation of SOAR1 almost completely impairs, ABA responses, revealing that SOAR1 is a critical, negative, regulator of ABA signalling. Further genetic evidence supports that SOAR1 functions downstream of ABAR and probably upstream of an ABA-responsive transcription factor ABI5. Changes in the SOAR1 expression alter expression of a subset of ABA-responsive genes including ABI5. These findings provide important information to elucidate further the functional mechanism of PPR proteins and the complicated ABA signalling network. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0029590 #N/A #N/A #N/A #N/A Ipc04G0029600 AT4G32600.2 0 0 C3H4 type zinc finger protein;(source:Araport11) Ipc04G0029610 AT1G32780.1 GroES-like zinc-binding dehydrogenase family protein 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc04G0029620 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc04G0029630 AT2G16390.1 SNF2 domain-containing protein / helicase domain-containing protein Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc04G0029640 AT5G25950.1 Protein of Unknown Function (DUF239) 0 AslB, putative (DUF239);(source:Araport11) Ipc04G0029650 AT2G16390.2 0 Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc04G0029660 AT1G34350.1 0 Encodes a putative transmembrane protein that has been localized around the nucleus and is involved in pollen germination and pollen tube growth. Tmem18;(source:Araport11) Ipc04G0029670 AT2G25660.3 0 Translocon at the inner-envelope membrane of chloroplasts which binds to the outer-membrane channel TOC75. embryo defective 2410;(source:Araport11) Ipc04G0029680 AT5G47430.3 DWNN domain, a CCHC-type zinc finger 0 DWNN domain, a CCHC-type zinc finger;(source:Araport11) Ipc04G0029690 AT5G11450.2 0 0 PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11) Ipc06G0017750 AT2G06025.6 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc06G0017760 AT4G23060.1 IQ-domain 22 0 IQ-domain 22;(source:Araport11) Ipc06G0017770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0017780 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc06G0017790 AT3G50370.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0017800 AT4G02620.1 vacuolar ATPase subunit F family protein 0 vacuolar ATPase subunit F family protein;(source:Araport11) Ipc06G0017810 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0017820 AT5G21105.1 Plant L-ascorbate oxidase 0 Plant L-ascorbate oxidase;(source:Araport11) Ipc06G0017830 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0002340 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc01G0002330 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc01G0002320 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0002310 AT3G23750.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) IpcGene31966 AT2G37690.1 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative 0 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase;(source:Araport11) IpcGene31967 AT5G04870.1 calcium dependent protein kinase 1 A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. calcium dependent protein kinase 1;(source:Araport11) IpcGene31968 AT3G10650.2 0 Encodes a nucleoporin involved in mRNA export from the nucleus. It is also involved in the regulation of nuclear morphology. nuclear pore complex protein;(source:Araport11) IpcGene31969 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0008750 AT4G32605.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) IpcGene31971 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) IpcGene31972 AT2G34370.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) IpcGene31973 AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc06G0016460 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0016450 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016510 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016440 AT4G00690.1 UB-like protease 1B 0 UB-like protease 1B;(source:Araport11) Ipc06G0016420 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc06G0016410 AT1G61150.7 LisH and RanBPM domains containing protein 0 LisH and RanBPM domains containing protein;(source:Araport11) Ipc06G0016400 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016390 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc06G0016380 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0016370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016360 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0015580 AT5G13450.1 delta subunit of Mt ATP synthase 0 delta subunit of Mt ATP synthase;(source:Araport11) Ipc13G0015590 AT1G13970.1 Protein of unknown function (DUF1336) 0 beta-hexosaminidase (DUF1336);(source:Araport11) Ipc13G0015600 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0015610 AT3G63530.2 RING/U-box superfamily protein Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation. RING/U-box superfamily protein;(source:Araport11) Ipc13G0015620 AT5G13490.2 ADP/ATP carrier 2 Encodes mitochondrial ADP/ATP carrier ADP/ATP carrier 2;(source:Araport11) Ipc13G0015630 AT4G00380.2 0 Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). XH/XS domain-containing protein;(source:Araport11) Ipc13G0015640 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc13G0015650 AT1G20770.2 0 0 coiled-coil protein;(source:Araport11) Ipc13G0015660 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0015670 AT2G15180.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015680 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc13G0015700 AT1G80410.2 tetratricopeptide repeat (TPR)-containing protein Encodes the catalytic subunit of a N-terminal acetyltransferase. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc13G0015720 AT1G26330.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc13G0015730 AT3G61780.1 embryo defective 1703 0 embryo defective 1703;(source:Araport11) Ipc13G0015740 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0015750 AT3G57670.1 C2H2-type zinc finger family protein Encodes a a C2H2/C2HC zinc finger transcription factor specifically expressed in the transmitting tract and involved in transmitting tract development and pollen tube growth.Acts redundantly with WIP4 and WIP5 to determine distal cell fate in the root. MP binds to regulatory elements within the NTT locus and likely regulates its expression. C2H2-type zinc finger family protein;(source:Araport11) Ipc13G0015760 AT5G38060.1 0 0 carboxypeptidase;(source:Araport11) Ipc13G0015770 AT3G08505.3 0 0 zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc13G0015780 AT5G62520.1 similar to RCD one 5 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to RCD one 5;(source:Araport11) Ipc13G0015800 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0015790 AT3G20920.1 translocation protein-related 0 translocation protein-like protein;(source:Araport11) Ipc13G0015810 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0015820 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0015830 AT2G26320.1 AGAMOUS-like 33 0 AGAMOUS-like 33;(source:Araport11) Ipc13G0015840 AT2G28270.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc13G0015850 #N/A #N/A #N/A #N/A Ipc13G0015860 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0015870 AT3G12640.3 0 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0015880 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc13G0015890 AT5G66631.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0015900 AT5G66631.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0015910 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc13G0015920 AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF 0 SWIB/MDM2 and Plus-3 and GYF domain-containing protein;(source:Araport11) Ipc13G0015930 AT5G45510.2 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0015940 AT3G52115.1 gamma response gene 1 Induced in response to ionizing radiation, shows basal expression in mitotically active cells and high expression in endoreduplicating cells. May be involved in DNA damage-induced growth arrest. Protein sequence contains a PEST destruction box. protein gamma response 1;(source:Araport11) Ipc13G0015950 AT3G12610.1 Leucine-rich repeat (LRR) family protein Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0015960 AT1G13750.1 Purple acid phosphatases superfamily protein Encodes a purple acid phosphatase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. Purple acid phosphatases superfamily protein;(source:Araport11) Ipc13G0015970 AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0015980 AT4G28470.1 26S proteasome regulatory subunit S2 1B encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1B;(source:Araport11) Ipc13G0015990 AT4G34730.3 0 0 ribosome-binding factor A family protein;(source:Araport11) Ipc13G0016000 AT3G07450.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0016010 AT5G48020.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc13G0016020 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc13G0016030 AT5G35338.2 methyl-CPG-binding domain 12 Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 12;(source:Araport11) Ipc13G0016040 #N/A #N/A #N/A #N/A Ipc13G0016050 AT4G06536.1 SPla/RYanodine receptor (SPRY) domain-containing protein 0 SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11) Ipc13G0016060 AT1G53770.2 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0016070 AT1G56450.1 20S proteasome beta subunit G1 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds 20S proteasome beta subunit G1;(source:Araport11) Ipc13G0016080 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016090 AT1G53990.1 GDSL-motif lipase 3 Contains lipase signature motif and GDSL domain. The mRNA is cell-to-cell mobile. GDSL-motif lipase 3;(source:Araport11) Ipc13G0016100 AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein 0 CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc13G0016110 AT3G07670.2 0 0 Rubisco methyltransferase family protein;(source:Araport11) Ipc03G0025950 AT2G43000.2 0 Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2). Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses. NAC domain containing protein 42;(source:Araport11) Ipc03G0025940 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0025930 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0025920 AT5G42540.1 exoribonuclease 2 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing. exoribonuclease 2;(source:Araport11) Ipc03G0025910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025900 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc03G0025890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025880 AT2G24960.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc03G0025870 AT2G13690.1 PRLI-interacting factor, putative 0 PRLI-interacting factor;(source:Araport11) Ipc03G0025860 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025850 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000150 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000140 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000130 AT4G18820.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc03G0000120 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc03G0000110 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0000100 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc03G0000090 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc03G0000080 AT1G76980.1 0 0 patatin-like phospholipase domain protein;(source:Araport11) Ipc03G0000070 AT2G25790.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc03G0000060 AT1G04625.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0000040 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0000030 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc03G0000020 AT2G13610.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc03G0000610 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000600 AT3G22660.1 rRNA processing protein-related 0 rRNA processing protein-like protein;(source:Araport11) Ipc03G0000590 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc03G0000580 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000570 AT3G23410.1 fatty alcohol oxidase 3 Encodes a fatty alcohol oxidase. fatty alcohol oxidase 3;(source:Araport11) Ipc03G0000560 AT3G48010.1 cyclic nucleotide-gated channel 16 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 16;(source:Araport11) Ipc03G0000550 AT5G08740.1 NAD(P)H dehydrogenase C1 Encodes a dedicated Type II NADPH dehydrogenase that catalyzes the penultimate step in phylloquinone (vitamin K1). biosynthesis NAD(P)H dehydrogenase C1;(source:Araport11) Ipc03G0000540 AT5G08470.3 0 an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. peroxisome 1;(source:Araport11) Ipc03G0000530 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000520 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc03G0000510 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc03G0000500 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc03G0000490 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000480 AT3G20200.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0000470 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0013350 AT1G60590.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc09G0013360 AT3G48710.1 DEK domain-containing chromatin associated protein 0 DEK domain-containing chromatin associated protein;(source:Araport11) Ipc09G0013370 AT1G52980.1 GTP-binding family protein Encodes a GTPase that belongs to the subfamily of YlqF/YawG GTPases. Functions in Pre-60S ribosomal subunit maturation. The mRNA is cell-to-cell mobile. GTP-binding family protein;(source:Araport11) Ipc09G0013380 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc09G0013390 AT5G14670.3 0 A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1B;(source:Araport11) Ipc09G0013400 AT5G13950.3 0 0 nuclear factor kappa-B-binding protein;(source:Araport11) Ipc09G0013410 AT1G43580.1 Sphingomyelin synthetase family protein 0 Sphingomyelin synthetase family protein;(source:Araport11) Ipc09G0013420 AT5G44510.2 0 Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB. target of AVRB operation1;(source:Araport11) Ipc09G0013430 AT4G32180.3 pantothenate kinase 2 Encodes a protein with pantothenate kinase activity. pantothenate kinase 2;(source:Araport11) Ipc09G0013440 AT1G70420.1 Protein of unknown function (DUF1645) 0 DNA ligase-like protein, putative (DUF1645);(source:Araport11) Ipc09G0013450 AT1G02550.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc09G0013460 AT1G23530.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0013470 AT5G54380.1 protein kinase family protein Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. protein kinase family protein;(source:Araport11) Ipc09G0013480 AT1G70480.1 Domain of unknown function (DUF220) 0 OBP32pep, putative (DUF220);(source:Araport11) Ipc09G0013490 AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein AOR is an alkenal/one oxidoreductase that acts on compounds with unsaturated alpha,beta-carbonyls. The activity of this enzyme with a number of substrates, including acrolein and 3-buten-2-one, was demonstrated in vitro using a truncated form of the protein that lacked approximately 80 of the first amino acids. This protein appears to localize to the chloroplast where it likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc09G0013500 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc09G0013510 AT1G23790.1 Plant protein of unknown function (DUF936) 0 dicer-like protein (DUF936);(source:Araport11) Ipc09G0013520 AT2G45110.1 expansin B4 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B4;(source:Araport11) Ipc09G0013530 AT5G07760.1 formin homology 2 domain-containing protein / FH2 domain-containing protein 0 formin homology 2 domain-containing protein / FH2 domain-containing protein;(source:Araport11) Ipc09G0013540 AT1G75800.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc09G0013550 AT1G31640.1 AGAMOUS-like 92 A paternally expressed imprinted gene. AGAMOUS-like 92;(source:Araport11) Ipc09G0013560 AT1G60200.1 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein RMB25 is an alternative splicing factor involved in mediation of abiotic stress response and ABA response. Its expression is modulated by a variety of stressors and it in turn appears to affect the ratio of splice variants of stress responsive genes such as HAB1.2/HAB1.1. splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein;(source:Araport11) Ipc09G0013570 AT2G41840.1 Ribosomal protein S5 family protein 0 Ribosomal protein S5 family protein;(source:Araport11) Ipc09G0013580 AT1G10550.1 xyloglucan:xyloglucosyl transferase 33 Encodes a membrane-localized protein that is predicted to function during cell wall modification.Overexpression of XTH33 results in abnormal cell morphology. It's expression is under epigenetic control by ATX1. xyloglucan:xyloglucosyl transferase 33;(source:Araport11) Ipc09G0013590 AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein Encodes a splicing factor PRP31. Involved in transcriptional gene silencing and stress responses. pre-mRNA processing ribonucleoprotein binding region-containing protein;(source:Araport11) Ipc09G0013600 AT1G80670.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0013610 AT4G08940.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc09G0013620 AT1G23820.1 spermidine synthase 1 Spermidine synthase. spermidine synthase;(source:Araport11) Ipc09G0013630 AT1G70300.1 K+ uptake permease 6 potassium transporter K+ uptake permease 6;(source:Araport11) Ipc09G0013640 AT1G23870.1 trehalose-phosphatase/synthase 9 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. The mRNA is cell-to-cell mobile. trehalose-phosphatase/synthase 9;(source:Araport11) Ipc09G0013650 AT1G70280.2 NHL domain-containing protein 0 NHL domain-containing protein;(source:Araport11) Ipc09G0013660 AT1G60070.1 Adaptor protein complex AP-1, gamma subunit 0 Adaptor protein complex AP-1, gamma subunit;(source:Araport11) Ipc09G0013670 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc09G0013680 AT5G40250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0013690 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0013700 AT3G09040.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0013710 AT1G60060.1 Serine/threonine-protein kinase WNK (With No Lysine)-related 0 Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11) Ipc09G0013720 AT1G29200.2 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc09G0013730 AT5G40230.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc09G0013740 AT2G34070.1 TRICHOME BIREFRINGENCE-LIKE 37 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 37;(source:Araport11) Ipc09G0013750 AT1G70260.1 nodulin MtN21 /EamA-like transporter family protein Encodes an endoplasmic reticulum (ER)-localized nodulin MtN21-like transporter family protein that negatively regulates resistance against biotrophic pathogens but not the necrotrophic pathogen, B. cinerea, possibly by regulating ROS production, cell death and PR1 expression. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc09G0013760 AT1G31220.1 Formyl transferase N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide Formyl transferase;(source:Araport11) Ipc09G0013770 AT1G24040.3 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc09G0013780 AT2G24040.1 Low temperature and salt responsive protein family 0 Low temperature and salt responsive protein family;(source:Araport11) Ipc09G0013790 AT1G24050.1 RNA-processing, Lsm domain 0 RNA-processing, Lsm domain-containing protein;(source:Araport11) Ipc09G0013800 AT3G62940.4 0 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc09G0013810 AT1G24090.1 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc09G0013820 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc09G0013830 AT1G10520.1 DNA polymerase lambda (POLL) Encodes a homolog of the mammalian DNA polymerase lambda that is involved in the repair of UV-B induced DNA damage. DNA polymerase lambda (POLL);(source:Araport11) Ipc09G0013840 AT1G53770.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc09G0013850 AT1G05675.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0013860 AT1G24100.1 UDP-glucosyl transferase 74B1 Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis UDP-glucosyl transferase 74B1;(source:Araport11) Ipc09G0013870 AT3G58160.4 0 Class XI myosin gene expressed in flowers from 4-6 week old plants and leaves from 3 week old plants P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0013880 AT5G06470.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc09G0013890 AT1G23750.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc09G0013900 AT5G14940.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc09G0013910 AT4G32420.2 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc09G0013920 AT1G65985.2 0 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc09G0013930 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc09G0013940 AT1G67030.1 zinc finger protein 6 Encodes a novel C2H2 zinc finger protein containing only a single zinc finger which plays a key role in regulating trichome development by integrating GA and cytokinin signaling. The mRNA is cell-to-cell mobile. zinc finger protein 6;(source:Araport11) Ipc09G0013950 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc09G0013960 AT5G40520.2 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc09G0013970 AT1G24130.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0013980 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc09G0013990 AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress. Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc09G0014000 AT1G49310.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0014010 AT1G70170.1 matrix metalloproteinase mutant has Late flowering; Early senescence; Matrix Metalloproteinase matrix metalloproteinase;(source:Araport11) Ipc09G0014020 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc09G0014030 AT1G19020.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc09G0014040 AT5G08415.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc09G0014050 AT5G39210.1 chlororespiratory reduction 7 Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex. The mRNA is cell-to-cell mobile. chlororespiratory reduction 7;(source:Araport11) Ipc09G0014060 AT1G19020.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc09G0014070 AT1G27900.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc09G0014080 AT1G70150.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc09G0014090 AT2G30910.3 actin-related protein C1A 0 actin-related protein C1A;(source:Araport11) Ipc09G0014100 AT1G70100.4 0 0 neurofilament heavy protein;(source:Araport11) Ipc13G0016980 AT2G30630.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0014110 AT2G47420.1 Ribosomal RNA adenine dimethylase family protein Encodes a putative rRNA dimethyltransferase. Ribosomal RNA adenine dimethylase family protein;(source:Araport11) Ipc09G0014120 AT1G70090.2 glucosyl transferase family 8 Encodes a protein with putative galacturonosyltransferase activity. glucosyl transferase family 8;(source:Araport11) Ipc09G0014130 AT2G40000.1 ortholog of sugar beet HS1 PRO-1 2 0 ortholog of sugar beet HS1 PRO-1 2;(source:Araport11) Ipc09G0014140 AT1G70070.1 DEAD/DEAH box helicase, putative Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. DEAD/DEAH box helicase;(source:Araport11) Ipc09G0014150 AT1G27200.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc09G0014160 AT1G59840.2 cofactor assembly of complex C 0 cofactor assembly of complex C;(source:Araport11) Ipc09G0014170 AT1G70000.2 myb-like transcription factor family protein Encodes a MYB-like Domain transcription factor that plays a positive role in anthocyanin accumulation in response to light and cytokinin via repression of MYBL2.MYBD expression increased in response to light or cytokinin, and MYBD enhanced anthocyanin biosynthesis via the repression of MYBL2 encoding for a transcription factor that had a negative effect on this process. In addition, MYBD can bind in vivo to the MYBL2 promoter and a lower level of histone H3K9 acetylation (H3K9ac) at upstream region of MYBL2 in MYBD-OX in comparison to wild-type plants, implies that MYBD represses MYBL2 expression via an epigenetic mechanism. myb-like transcription factor family protein;(source:Araport11) Ipc09G0014180 AT1G10430.2 0 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. It regulates the activation of ADF/cofilin, which, in turn, regulates actin cytoskeleton remodeling and is involved in phot2-mediated chloroplast avoidance movements. protein phosphatase 2A-2;(source:Araport11) Ipc09G0014190 AT1G69970.2 CLAVATA3/ESR-RELATED 26 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo. CLAVATA3/ESR-RELATED 26;(source:Araport11) Ipc09G0014200 AT1G72930.2 toll/interleukin-1 receptor-like Toll/interleukin-1 receptor-like protein (TIR) mRNA, toll/interleukin-1 receptor-like protein;(source:Araport11) Ipc09G0014210 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc09G0014220 AT1G62670.2 0 Encodes a pentatricopeptide repeat protein required for 5 Prime end processing of nad9 and cox3 mRNAs in mitochondria. rna processing factor 2;(source:Araport11) Ipc09G0014230 AT1G59640.1 BIG PETAL P A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. transcription factor BIG PETAL P (BPE);(source:Araport11) Ipc09G0014240 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc09G0014250 AT1G63400.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0014260 AT1G10417.2 0 Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. RUN/FYVE domain protein;(source:Araport11) Ipc09G0014270 AT1G59650.1 Protein of unknown function (DUF1336) Encodes CW14. CW14 protein (DUF1336);(source:Araport11) Ipc09G0014280 AT1G04840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0014290 AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0014300 AT1G74790.1 catalytics 0 catalytics;(source:Araport11) Ipc09G0014310 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0014320 AT4G26310.2 elongation factor P (EF-P) family protein 0 elongation factor P (EF-P) family protein;(source:Araport11) Ipc09G0014330 AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0014340 AT1G10360.1 glutathione S-transferase TAU 18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 18;(source:Araport11) Ipc09G0014350 AT1G10370.1 Glutathione S-transferase family protein Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses. Glutathione S-transferase family protein;(source:Araport11) Ipc09G0014360 AT1G27150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0014370 AT1G69910.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc09G0014390 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0014380 AT1G42470.1 Patched family protein 0 Patched family protein;(source:Araport11) Ipc09G0014400 #N/A #N/A #N/A #N/A Ipc09G0014410 AT1G64235.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0014420 AT1G59710.1 Protein of unknown function (DUF569) 0 actin cross-linking protein (DUF569);(source:Araport11) Ipc09G0014430 AT1G59720.1 Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0014440 AT1G10350.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc09G0014450 AT1G27090.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc09G0014460 AT1G35410.1 Protein of unknown function (DUF1184) 0 hypothetical protein (DUF1184);(source:Araport11) Ipc09G0014470 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc09G0014480 AT1G69870.1 nitrate transporter 1.7 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile. nitrate transporter 1.7;(source:Araport11) Ipc09G0014490 AT5G44710.1 0 0 37S ribosomal protein S27;(source:Araport11) Ipc09G0014500 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc09G0014510 AT1G69870.1 nitrate transporter 1.7 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile. nitrate transporter 1.7;(source:Araport11) Ipc09G0014520 AT4G27510.1 0 0 2-isopropylmalate synthase;(source:Araport11) Ipc09G0014530 AT1G27070.1 5'-AMP-activated protein kinase-related Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. PTST2 delivers suitable oligosaccharide substrates to starch synthase 4 (SS4). Mutants lacking PTST2 have fewer starch granules in leaf chloroplasts than the wild type. PTST2 is the Arabidopsis ortholog of the rice FLO6 protein. 5-AMP-activated protein kinase-like protein;(source:Araport11) Ipc09G0014540 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc09G0014550 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc09G0014560 AT5G15110.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc09G0014570 AT2G33530.1 serine carboxypeptidase-like 46 0 serine carboxypeptidase-like 46;(source:Araport11) Ipc09G0014580 AT1G28110.2 serine carboxypeptidase-like 45 0 serine carboxypeptidase-like 45;(source:Araport11) Ipc09G0014590 AT4G23885.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0014600 AT4G02770.1 photosystem I subunit D-1 Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1) photosystem I subunit D-1;(source:Araport11) Ipc09G0014610 AT1G28110.2 serine carboxypeptidase-like 45 0 serine carboxypeptidase-like 45;(source:Araport11) Ipc09G0014620 AT1G69800.1 Cystathionine beta-synthase (CBS) protein 0 Cystathionine beta-synthase (CBS) protein;(source:Araport11) Ipc09G0014630 AT1G14380.7 0 Encodes a microtubule-associated protein. IQ-domain 28;(source:Araport11) Ipc09G0014640 AT1G18770.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0014650 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0014660 AT1G14360.1 UDP-galactose transporter 3 0 UDP-galactose transporter 3;(source:Araport11) Ipc09G0014670 AT3G52860.1 0 Encodes a mediator subunit,, important for development and senescence. mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11) Ipc09G0014680 AT1G14350.2 Duplicated homeodomain-like superfamily protein Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88. Its transcript levels change after inducing MUTE expression in a mute background. Also regulates female reproductive development. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc09G0014690 AT1G69780.1 Homeobox-leucine zipper protein family Encodes a homeodomain leucine zipper class I (HD-Zip I) protein which is expressed during the seed-to-seedling transition, regulates some of the network nodes, and affects late seedling establishment. Knock-out mutants for athb13 showed increased primary root length as compared with wild type (Col-0) seedlings, suggesting that this transcription factor is a negative regulator of early root growth, possibly repressing cell division and/or cell elongation or the length of time cells elongate. Homeobox-leucine zipper protein family;(source:Araport11) Ipc09G0014700 AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc09G0014710 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0014720 AT1G30960.1 GTP-binding family protein Ortholog of ERA (E. coli RAS-like protein)-related GTPase (ERG). Mitochondrial protein that associates with 18sRNA. Heterozygous mutants segregate for embryo lethality inherited as a sporphytic maternal effect. Increased ROS in the mutant ovule suggests a heritable mitochondrial defect results in lethality. GTP-binding family protein;(source:Araport11) Ipc09G0014730 AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc09G0014740 AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0014750 AT1G69560.1 myb domain protein 105 Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780). myb domain protein 105;(source:Araport11) Ipc09G0014760 AT3G22690.2 0 YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation. LOW protein: PPR containing-like protein;(source:Araport11) Ipc09G0014770 AT2G17033.4 0 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc09G0014780 AT5G40820.2 0 Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al. Ataxia telangiectasia-mutated and RAD3-like protein;(source:Araport11) Ipc09G0014790 AT4G38460.1 geranylgeranyl reductase Encodes a type II small subunit of the heteromeric geranyl(geranyl) diphosphate synthase that is localized to the chloroplast, expressed in petals and sepals and is involved in monoterpene biosynthesis. The mRNA is cell-to-cell mobile. geranylgeranyl reductase;(source:Araport11) Ipc09G0014800 AT4G38430.1 rho guanyl-nucleotide exchange factor 1 Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. ropgef1 mutants have defects in auxin transport that result in abnormal development of embryos and growth defects. rho guanyl-nucleotide exchange factor 1;(source:Araport11) Ipc09G0014810 AT4G28020.4 0 0 tRNA-thr(GGU) m(6)t(6)A37 methyltransferase;(source:Araport11) Ipc09G0014820 AT1G16210.1 0 0 coiled-coil protein;(source:Araport11) Ipc09G0014830 AT5G55050.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc09G0014840 AT4G35250.1 NAD(P)-binding Rossmann-fold superfamily protein HCF244 is a member of the atypical short-chain dehydrogenase/reductase superfamily, a modified group, which has lost enzyme activity.HCF244 interacts with unknown partners in a 200-400 kD membrane associated complex. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc09G0014850 AT1G20550.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc09G0014860 AT5G60620.1 glycerol-3-phosphate acyltransferase 9 Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation. ER-localized GPAT enzyme responsible for plant membrane lipid and oil biosynthesis. glycerol-3-phosphate acyltransferase 9;(source:Araport11) Ipc09G0014870 AT4G35260.1 isocitrate dehydrogenase 1 Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. isocitrate dehydrogenase 1;(source:Araport11) Ipc09G0014880 AT2G17980.1 Sec1/munc18-like (SM) proteins superfamily member of SLY1 Gene Family The mRNA is cell-to-cell mobile. Sec1/munc18-like (SM) proteins superfamily;(source:Araport11) Ipc09G0014890 AT5G04870.1 calcium dependent protein kinase 1 A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. calcium dependent protein kinase 1;(source:Araport11) Ipc09G0014900 AT4G38280.1 0 0 integral membrane hemolysin-III-like protein;(source:Araport11) Ipc09G0014910 AT2G17140.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0014920 AT4G38260.1 Protein of unknown function (DUF833) 0 transport/golgi organization-like protein (DUF833);(source:Araport11) Ipc09G0014930 AT2G23240.1 Plant EC metallothionein-like protein, family 15 AtMT4b is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds. Plant EC metallothionein-like protein, family 15;(source:Araport11) Ipc09G0014940 AT2G17230.1 EXORDIUM like 5 0 EXORDIUM like 5;(source:Araport11) Ipc09G0014950 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc09G0014960 AT4G38225.3 0 0 glycerol kinase;(source:Araport11) Ipc09G0014970 AT2G17290.2 0 Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. The protein kinase CPK6 is shown in biochemical assays to be directly activated by elevations in calcium concentrations in the physiological range (Laanements et al., 2013 PlantPhys.; PMID: 23766366). These data correlate with the in vivo function of CPK6 in Ca2+ and ABA activation of S-type anion channels (Mori et al., 2006 PLoS Biol.; PMID: 17032064) and the ability of CPK6 to mediate ABA activation of SLAC1 (Brandt et al., 2012 PNAS; PMID: 22689970).The mRNA is cell-to-cell mobile. Calcium-dependent protein kinase family protein;(source:Araport11) Ipc09G0014980 AT4G35300.8 0 0 tonoplast monosaccharide transporter2;(source:Araport11) Ipc09G0014990 AT4G38140.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0015000 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc09G0015010 AT5G50310.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc09G0015020 AT4G24910.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc09G0015030 AT4G24930.1 thylakoid lumenal 17.9 kDa protein, chloroplast 0 thylakoid lumenal 17.9 kDa protein, chloroplast;(source:Araport11) Ipc09G0015040 AT3G17810.1 pyrimidine 1 Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid. pyrimidine 1;(source:Araport11) Ipc09G0015050 AT4G15890.1 binding CAP-3D is a subunit of condensin. It a target of MMD1 regulation and also involved in meiotic chromosome condensation. Mutants have reduced fertility. Required for the correct spatial relationship between centromeres and rDNA arrays. binding protein;(source:Araport11) Ipc12G0006940 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0006930 AT5G50740.5 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0006920 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc12G0006910 AT5G60850.1 OBF binding protein 4 Encodes a zinc finger protein. OBF binding protein 4;(source:Araport11) Ipc12G0006900 AT5G23680.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc12G0006890 AT3G18310.1 0 0 TATA box-binding protein associated factor RNA polymerase I subunit C;(source:Araport11) Ipc12G0006880 AT5G15740.1 O-fucosyltransferase family protein RRT1 is a member of a novel glycosyltransferase famly in plants. It functions as a rhamnosyltransferase, elongating the RG-1 backbone. It functions during seed coat mucilage development. O-fucosyltransferase family protein;(source:Araport11) Ipc12G0006870 AT4G31520.1 SDA1 family protein 0 SDA1 family protein;(source:Araport11) Ipc12G0006860 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0006850 AT5G08130.4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) family protein BIM1 (BES1-INTERACTING MYC-LIKE 1), involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0006840 AT3G11200.1 alfin-like 2 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 2;(source:Araport11) Ipc12G0006830 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc12G0006820 AT3G30350.2 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor-like protein;(source:Araport11) Ipc12G0006810 AT3G45610.1 Dof-type zinc finger DNA-binding family protein PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc12G0006800 AT3G42660.1 transducin family protein / WD-40 repeat family protein Ctf4 related nuclear protein. Interacts with LHP1-PRC2 to maintain H3K27 methylation in rapidly dividing cells. EOL1 expression is restricted to rapidly dividing cells. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc12G0006780 AT5G60840.2 0 0 hypothetical protein;(source:Araport11) Ipc12G0006790 AT5G08139.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0006770 AT3G54550.1 Protein of unknown function (DUF506) 0 DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506);(source:Araport11) Ipc12G0006760 AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0006750 AT1G73990.1 signal peptide peptidase Encodes a putative protease SppA (SppA). signal peptide peptidase;(source:Araport11) Ipc12G0006740 AT4G15236.1 ABC-2 and Plant PDR ABC-type transporter family protein 0 ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) Ipc12G0006730 AT5G38790.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0006720 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0006710 AT5G08160.1 serine/threonine protein kinase 3 Encodes a serine/threonine protein kinase. serine/threonine protein kinase 3;(source:Araport11) Ipc12G0006700 AT4G37700.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0006690 AT5G08170.1 porphyromonas-type peptidyl-arginine deiminase family protein 0 porphyromonas-type peptidyl-arginine deiminase family protein;(source:Araport11) Ipc12G0006680 AT3G57030.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc12G0006670 AT1G74010.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc12G0006660 AT1G74010.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc12G0006650 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0006640 AT1G74010.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc12G0006630 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0006620 AT3G25970.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0006610 AT3G44870.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a protein with 93% identity to a farnesoic acid methyl transferase. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc12G0006600 AT1G18490.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc12G0006590 #N/A #N/A #N/A #N/A Ipc12G0006580 AT1G18520.1 tetraspanin11 Member of TETRASPANIN family tetraspanin11;(source:Araport11) Ipc12G0006570 AT1G35040.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0006560 AT5G23050.1 acyl-activating enzyme 17 0 acyl-activating enzyme 17;(source:Araport11) Ipc12G0006550 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc12G0006540 AT5G23060.1 calcium sensing receptor Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium. calcium sensing receptor;(source:Araport11) Ipc12G0006530 AT1G74055.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0006520 AT1G18530.1 EF hand calcium-binding protein family Calmodulin like protein. Paralog of CML16. Expression in flowers is restricted to anthers and mature pollen. EF hand calcium-binding protein family;(source:Araport11) Ipc12G0006510 AT5G23080.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. It is an important component of miRNA and siRNA biogenesis. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1. SWAP (Suppressor-of-White-APricot)/surp domain-containing protein;(source:Araport11) Ipc12G0006500 AT3G17611.1 RHOMBOID-like protein 14 0 RHOMBOID-like protein 14;(source:Araport11) Ipc12G0006490 AT1G18550.1 ATP binding microtubule motor family protein 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc12G0006480 AT5G23100.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc12G0006470 AT5G23090.5 0 0 nuclear factor Y, subunit B13;(source:Araport11) Ipc12G0006460 AT3G18600.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0006450 AT1G48940.1 early nodulin-like protein 6 0 early nodulin-like protein 6;(source:Araport11) Ipc12G0006440 AT1G48950.1 C3HC zinc finger-like 0 C3HC zinc finger-like protein;(source:Araport11) Ipc12G0006430 AT1G74070.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc12G0006420 AT3G18580.1 Nucleic acid-binding, OB-fold-like protein Member of the family of canonical mitochondrial DNA binding proteins. Single-stranded binding protein which does not interfere with MMEJ. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc12G0006410 AT3G18570.1 Oleosin family protein 0 Oleosin family protein;(source:Araport11) Ipc12G0006400 AT5G58890.1 AGAMOUS-like 82 0 AGAMOUS-like 82;(source:Araport11) Ipc12G0006390 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0006380 AT1G49000.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0006370 AT2G15180.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0006360 AT4G11270.2 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0006350 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc12G0006340 AT1G03280.3 0 0 Transcription factor TFIIE, alpha subunit;(source:Araport11) Ipc12G0006330 AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc12G0006320 AT1G67260.3 0 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP family transcription factor;(source:Araport11) Ipc12G0006310 AT3G18524.1 MUTS homolog 2 Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. MUTS homolog 2;(source:Araport11) Ipc12G0006300 AT1G18470.1 Transmembrane Fragile-X-F-associated protein 0 Transmembrane Fragile-X-F-associated protein;(source:Araport11) Ipc12G0006290 AT1G49010.1 Duplicated homeodomain-like superfamily protein 0 Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc12G0006280 AT3G18520.1 histone deacetylase 15 Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. histone deacetylase 15;(source:Araport11) Ipc12G0006270 AT3G18510.1 0 0 ATP-dependent helicase/nuclease subunit;(source:Araport11) Ipc12G0006260 AT1G73920.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc12G0006250 AT3G18500.3 DNAse I-like superfamily protein Deadenylase. DNAse I-like superfamily protein;(source:Araport11) Ipc12G0006240 AT1G68660.1 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ClpS1 is a member of the caseionolytic proteinase S family of N-recognins. It is involved in proteolysis in the chloroplast stroma. An arginine residue (Arg50) controls low-affinity substrate binding. Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11) Ipc12G0006230 AT2G13810.1 AGD2-like defense response protein 1 ALD1 is a L-lysine alpha-aminotransferase. It is part of the pipecolic acid biosynthetic pathway, where it catalyzes the biochemical conversion of lysine to epsilon-amino-alpha-ketocaproic acid (KAC) which is subject to subsequent transamination, cyclization and isomerization to form 2,3-dehydropipecolic acid. AGD2-like defense response protein 1;(source:Araport11) Ipc12G0006220 AT3G18490.1 Eukaryotic aspartyl protease family protein Encodes ASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1). Functions in drought avoidance through abscisic acid (ABA) signalling in guard cells. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0006210 AT3G57070.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc12G0006200 AT1G18440.1 Peptidyl-tRNA hydrolase family protein 0 Peptidyl-tRNA hydrolase family protein;(source:Araport11) Ipc12G0006190 AT3G04181.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0006180 AT1G68330.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc12G0006170 AT5G37400.1 Family of unknown function (DUF577) 0 hypothetical protein (DUF577);(source:Araport11) Ipc12G0006160 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc12G0006150 AT3G02560.3 0 0 Ribosomal protein S7e family protein;(source:Araport11) Ipc12G0006140 AT1G25340.1 myb domain protein 116 putative transcription factor (MYB116) myb domain protein 116;(source:Araport11) Ipc02G0002460 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002440 AT2G44440.1 Emsy N Terminus (ENT) domain-containing protein 0 Emsy N Terminus (ENT) domain-containing protein;(source:Araport11) Ipc02G0002430 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc02G0002420 AT4G15090.5 0 Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. Interacts with homologous gene FHY3. FRS (FAR1 Related Sequences) transcription factor family;(source:Araport11) Ipc02G0002400 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc02G0002390 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0002380 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002360 AT1G17860.1 Kunitz family trypsin and protease inhibitor protein Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites. Kunitz family trypsin and protease inhibitor protein;(source:Araport11) Ipc02G0002350 AT5G16110.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0002340 AT1G73860.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0002330 AT1G61415.1 0 0 CAP-gly domain linker;(source:Araport11) Ipc02G0002310 AT1G68320.1 myb domain protein 62 putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. myb domain protein 62;(source:Araport11) Ipc02G0002290 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0002280 AT1G69770.1 chromomethylase 3 Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing. chromomethylase 3;(source:Araport11) Ipc02G0002270 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0002250 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0002240 AT5G64960.1 cyclin dependent kinase group C2 Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components. cyclin dependent kinase group C2;(source:Araport11) Ipc02G0002220 AT1G73240.1 0 0 nucleoporin protein Ndc1-Nup protein;(source:Araport11) Ipc02G0002210 AT2G25720.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0002200 AT5G46830.1 NACL-inducible gene 1 Calcium-binding transcription factor involved in salt stress signaling. calcium-binding transcription factor NIG1;(source:Araport11) Ipc02G0002190 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0002180 AT4G03610.3 0 0 Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc05G0011860 AT1G22740.1 RAB GTPase homolog G3B GTP-binding protein Rab7 RAB GTPase homolog G3B;(source:Araport11) Ipc05G0011870 AT1G10500.1 chloroplast-localized ISCA-like protein Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues. chloroplast-localized ISCA-like protein;(source:Araport11) Ipc05G0011880 AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0011890 AT4G09810.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc05G0011900 AT4G09890.1 Protein of unknown function (DUF3511) 0 mediator of RNA polymerase II transcription subunit, putative (DUF3511);(source:Araport11) Ipc03G0000930 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0011910 AT5G64770.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc05G0011920 AT4G24630.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc05G0011930 AT4G34880.2 0 0 Amidase family protein;(source:Araport11) Ipc05G0011940 AT5G09880.1 Splicing factor, CC1-like 0 Splicing factor, CC1-like protein;(source:Araport11) Ipc05G0011950 AT2G21770.1 cellulose synthase A9 cellulose synthase, related to CESA6. cellulose synthase A9;(source:Araport11) Ipc05G0011960 AT5G64740.1 cellulose synthase 6 Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The mRNA is cell-to-cell mobile. cellulose synthase 6;(source:Araport11) Ipc05G0011970 AT5G09840.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc05G0011980 AT5G09850.5 0 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc05G0011990 AT1G76890.2 Duplicated homeodomain-like superfamily protein encodes a plant trihelix DNA-binding protein Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc05G0012000 AT1G76860.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc05G0012010 AT3G27740.1 carbamoyl phosphate synthetase A Encodes carbamoyl phosphate synthetase (CPS) small subunit (carA), also named as VEN6. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins. carbamoyl phosphate synthetase A;(source:Araport11) Ipc05G0012020 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc05G0012030 AT3G18770.1 Autophagy-related protein 13 0 Autophagy-related protein 13;(source:Araport11) Ipc05G0012040 AT3G57560.1 N-acetyl-l-glutamate kinase encodes a N-acetylglutamate kinase, involved in arginine biosynthesis N-acetyl-l-glutamate kinase;(source:Araport11) Ipc05G0012050 AT1G49180.2 protein kinase family protein 0 protein kinase family protein;(source:Araport11) Ipc05G0012060 AT1G25450.1 3-ketoacyl-CoA synthase 5 Encodes KCS5, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 5;(source:Araport11) Ipc05G0012070 AT3G18690.1 MAP kinase substrate 1 Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators. MAP kinase substrate 1;(source:Araport11) Ipc05G0012080 AT5G09790.1 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. TRITHORAX-RELATED PROTEIN 5;(source:Araport11) Ipc05G0012090 AT5G09760.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc05G0012100 AT5G09760.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc05G0012110 AT5G09750.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0012120 AT5G64630.2 Transducin/WD40 repeat-like superfamily protein Chromatin Assembly Factor-1 (CAF-1) p60 subunit. Involved in organization of the shoot and root apical meristems. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0012130 AT4G27610.9 0 0 intracellular protein transporter;(source:Araport11) Ipc05G0012140 AT5G64620.1 cell wall / vacuolar inhibitor of fructosidase 2 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. cell wall / vacuolar inhibitor of fructosidase 2;(source:Araport11) Ipc05G0012150 AT5G09330.5 0 0 NAC domain containing protein 82;(source:Araport11) Ipc05G0012160 AT4G33467.2 0 0 hypothetical protein;(source:Araport11) Ipc05G0012170 AT1G31490.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc05G0012180 AT3G22670.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0012190 AT3G19380.1 plant U-box 25 PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation. plant U-box 25;(source:Araport11) Ipc05G0012200 AT5G64010.1 0 0 U2 small nuclear ribonucleoprotein auxiliary factor-like protein;(source:Araport11) Ipc05G0012210 AT5G20680.6 0 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 16;(source:Araport11) Ipc05G0012220 AT1G77510.1 PDI-like 1-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner. PDI-like 1-2;(source:Araport11) Ipc05G0012230 AT3G45750.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc05G0012250 AT5G63770.2 diacylglycerol kinase 2 a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. diacylglycerol kinase 2;(source:Araport11) Ipc05G0012240 AT4G29300.1 low-molecular-weight cysteine-rich 27 Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. low-molecular-weight cysteine-rich 27;(source:Araport11) Ipc05G0012260 AT2G34480.2 0 Encodes a nuclear localized member of the ribosomal L18ae/LX protein family. Loss of function mutations show reduced transmission through the gametophytes and embryo lethality. Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc05G0012270 AT5G63970.2 Copine (Calcium-dependent phospholipid-binding protein) family Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli. Copine (Calcium-dependent phospholipid-binding protein) family;(source:Araport11) Ipc05G0012280 AT5G64030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0012290 AT2G13570.1 nuclear factor Y, subunit B7 0 nuclear factor Y, subunit B7;(source:Araport11) Ipc05G0012300 AT5G08750.7 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc05G0012310 AT3G05270.3 0 Encodes a protein that localizes at motile vesicle-like small compartments in differentiating xylem cells that is associated with microtubule plus-ends. VETH-positive compartments are unlikely to be elements in conventional endomembrane trafficking pathways. It can associate with COG2, and together these two proteins co-localize with the EXO70A1 exocyst subunit, tethering EXO70A1 to compartments associated with cortical microtubules. filament-like protein (DUF869);(source:Araport11) Ipc05G0012320 AT1G01720.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. The mRNA is cell-to-cell mobile. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc05G0012330 AT5G09220.1 amino acid permease 2 member of AAAP family The mRNA is cell-to-cell mobile. amino acid permease 2;(source:Araport11) Ipc05G0012340 AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. UVR8 interaction with COP1 is negatively regulated by RUP1 and RUP2. Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc05G0012350 AT4G33480.1 0 0 BTB/POZ domain protein TNFAIP protein;(source:Araport11) Ipc05G0012360 AT1G21980.1 phosphatidylinositol-4-phosphate 5-kinase 1 Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution. phosphatidylinositol-4-phosphate 5-kinase 1;(source:Araport11) Ipc05G0012370 AT1G77810.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc05G0012380 AT1G65120.2 Ubiquitin carboxyl-terminal hydrolase-related protein 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc05G0012390 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc05G0012400 AT5G39450.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0012410 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc05G0012420 AT5G63640.2 0 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc05G0012430 AT2G30390.1 ferrochelatase 2 Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromes. ferrochelatase 2;(source:Araport11) Ipc05G0012440 AT5G63650.1 SNF1-related protein kinase 2.5 encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. SNF1-related protein kinase 2.5;(source:Araport11) Ipc05G0012450 AT4G09160.2 0 PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells. SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11) Ipc05G0012460 AT4G38620.1 myb domain protein 4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile. myb domain protein 4;(source:Araport11) Ipc05G0012470 AT2G25180.1 response regulator 12 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 12;(source:Araport11) Ipc05G0012480 AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein NOI protein RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc05G0012490 AT4G00990.1 Transcription factor jumonji (jmjC) domain-containing protein jJumonji-domain-containing H3K9 histone demethylase. Loss of function mutants are susceptible to bacterial infection and early flowering. Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc05G0012500 AT5G50720.1 HVA22 homologue E Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. HVA22 homologue E;(source:Araport11) Ipc05G0012510 AT1G35670.1 calcium-dependent protein kinase 2 Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 2;(source:Araport11) Ipc05G0012520 AT1G04290.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc05G0012530 AT1G04290.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc05G0012540 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc05G0012550 AT1G71910.2 0 0 hypothetical protein;(source:Araport11) Ipc05G0012560 AT4G20760.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0012570 AT4G33420.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0012580 AT3G50360.1 centrin2 CAM like protein with four EF-hand domains. Binds calcium. Loss of function mutants affect ABA regulation of guard cell channels and accumulation of stress responsive transcripts(PMID:28603528). centrin2;(source:Araport11) Ipc05G0012590 AT5G23550.1 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc05G0012600 AT1G60995.1 0 0 S3 self-incompatibility locus-linked pollen protein;(source:Araport11) Ipc05G0012610 AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family 0 catalytic LigB subunit of aromatic ring-opening dioxygenase family;(source:Araport11) Ipc05G0012620 AT5G18420.1 0 0 CCR4-NOT transcription complex subunit;(source:Araport11) Ipc05G0012630 AT5G26360.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc05G0012640 AT5G23490.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0012650 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0012660 #N/A #N/A #N/A #N/A Ipc05G0012670 AT1G64890.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0012680 AT5G16680.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc05G0012690 AT5G16660.1 0 0 Low-density receptor-like protein;(source:Araport11) Ipc05G0012700 AT3G02910.1 AIG2-like (avirulence induced gene) family protein 0 AIG2-like (avirulence induced gene) family protein;(source:Araport11) Ipc05G0012710 AT4G27600.1 pfkB-like carbohydrate kinase family protein Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc05G0012720 AT4G27600.1 pfkB-like carbohydrate kinase family protein Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc05G0012730 AT5G16730.1 Plant protein of unknown function (DUF827) Encodes a microtubule-associated protein. The mRNA is cell-to-cell mobile. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc05G0012740 AT1G65020.1 0 0 plasma protein;(source:Araport11) Ipc05G0012750 AT2G23910.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0012760 AT5G16760.1 Inositol 1,3,4-trisphosphate 5/6-kinase family protein Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11) Ipc05G0012770 AT5G16770.4 0 Member of the R2R3 factor gene family. myb domain protein 9;(source:Araport11) Ipc05G0012780 AT5G16820.2 heat shock factor 3 Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. heat shock factor 3;(source:Araport11) Ipc05G0012790 AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0012800 AT5G16880.4 0 0 Target of Myb protein 1;(source:Araport11) Ipc05G0012810 AT3G03060.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0012820 AT3G03070.1 NADH-ubiquinone oxidoreductase-related 0 NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc05G0012830 AT5G18370.1 Disease resistance protein (TIR-NBS-LRR class) family Leucine-rich repeat domain (NLR) receptor. Dominant negative alleles suppress catma3 autoimmunity. disease resistance protein (TIR-NBS-LRR class) family protein;(source:Araport11) Ipc05G0012840 AT1G08580.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0012850 AT3G16090.1 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc05G0012860 AT5G17060.2 0 A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins. ADP-ribosylation factor B1B;(source:Araport11) Ipc05G0012870 AT3G03130.1 0 0 lisH domain-like protein;(source:Araport11) Ipc05G0012880 AT5G17210.1 Protein of unknown function (DUF1218) 0 transmembrane protein, putative (DUF1218);(source:Araport11) Ipc05G0012890 AT5G17170.1 rubredoxin family protein 0 rubredoxin family protein;(source:Araport11) Ipc05G0012900 AT5G17165.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0012910 AT3G49010.7 0 Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1). breast basic conserved 1;(source:Araport11) Ipc05G0012920 AT3G18440.1 aluminum-activated malate transporter 9 Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves. The mRNA is cell-to-cell mobile. aluminum-activated malate transporter 9;(source:Araport11) Ipc05G0012930 AT1G33230.1 TMPIT-like protein 0 TMPIT-like protein;(source:Araport11) Ipc05G0012940 AT3G28860.1 ATP binding cassette subfamily B19 Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1. ATP binding cassette subfamily B19;(source:Araport11) Ipc05G0012950 AT3G49590.2 Autophagy-related protein 13 0 Autophagy-related protein 13;(source:Araport11) Ipc05G0012960 AT5G24660.1 response to low sulfur 2 0 response to low sulfur 2;(source:Araport11) Ipc05G0012970 AT5G24650.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein HP30/Tric1 is a component of the mitochondrial protein translocation complex and is involved in tRNA transport along with HP30-2/Tric2.It interacts with several members of the TOM complex such as TOM40 and this interaction is mediated by the SAM domain. Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc05G0012980 AT5G24620.4 0 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc05G0012990 AT3G24080.4 0 0 KRR1 family protein;(source:Araport11) Ipc05G0013000 AT5G24600.1 Protein of unknown function, DUF599 0 TRP-like ion channel protein (Protein of unknown function, DUF599);(source:Araport11) Ipc05G0013010 AT5G54090.1 DNA mismatch repair protein MutS, type 2 0 DNA mismatch repair protein MutS, type 2;(source:Araport11) Ipc05G0013020 AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain 0 TTF-type zinc finger protein with HAT dimerization domain-containing protein;(source:Araport11) Ipc05G0013030 AT1G18010.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0013040 AT4G27580.1 0 0 phosphatidylinositol transfer SFH5-like protein;(source:Araport11) Ipc05G0013050 AT4G27585.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family Encodes a stomatin-like protein that is present in a mitochondrial membrane-bound 3 MDa protein complex and is involved in the assembly of mitochondrial respiratory supercomplexes. There is an observed increase in abundance of respiratory complex III2 in SLP1 single and double knockout mutants. The protein is not redundant with Arabidopsis SLP2 (At5g54100). SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc05G0013060 AT1G33140.1 Ribosomal protein L6 family Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2. The mRNA is cell-to-cell mobile. Ribosomal protein L6 family;(source:Araport11) Ipc05G0013070 AT5G24590.2 TCV-interacting protein Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV. TCV-interacting protein;(source:Araport11) Ipc05G0013080 AT5G24580.5 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0013090 AT4G27590.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0013100 AT3G49470.1 nascent polypeptide-associated complex subunit alpha-like protein 2 0 nascent polypeptide-associated complex subunit alpha-like protein 2;(source:Araport11) Ipc05G0013110 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc05G0013120 AT5G24520.4 0 Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes. Auxin and ethylene responsiveness of TTG1 transcription is lost in myb12 mutants. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0013130 AT5G53730.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc05G0013140 AT5G24470.1 pseudo-response regulator 5 Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY. two-component response regulator-like protein;(source:Araport11) Ipc05G0013150 AT4G10550.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc05G0013160 AT1G32790.1 CTC-interacting domain 11 RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins. CTC-interacting domain 11;(source:Araport11) Ipc05G0013170 AT4G27670.1 heat shock protein 21 Encodes Hsp21, a chloroplast located small heat shock protein. A structure model of Hsp21, obtained by homology modeling, single-particle electron microscopy, and lysine-specific chemical crosslinking, shows that the Hsp21 subunits are arranged in two hexameric discs, rotated by 25 degree in relation to each other. heat shock protein 21;(source:Araport11) Ipc05G0013180 AT4G24150.3 0 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower. growth-regulating factor 8;(source:Araport11) Ipc05G0013190 AT5G42090.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc05G0013200 AT2G46690.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc05G0013210 AT1G57680.3 0 0 plasminogen activator inhibitor;(source:Araport11) Ipc05G0013220 AT5G53580.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc05G0013230 AT3G52590.1 ubiquitin extension protein 1 Ubiquitin extension protein The mRNA is cell-to-cell mobile. ubiquitin extension protein 1;(source:Araport11) Ipc05G0013240 AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis. NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc05G0013250 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc05G0013260 AT3G49350.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc05G0013270 AT5G53560.1 cytochrome B5 isoform E Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase. cytochrome B5 isoform E;(source:Araport11) Ipc05G0013280 AT3G15040.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc05G0013290 AT5G53550.6 0 0 YELLOW STRIPE like 3;(source:Araport11) Ipc05G0013300 AT4G27720.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc05G0013310 AT5G24350.3 0 Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus, contain a Zeste?White 10 (ZW10) domain and a Sec39 domain. Required for proper maturation of seed storage proteins. neuroblastoma-amplified sequence protein;(source:Araport11) Ipc05G0013320 AT4G27730.1 oligopeptide transporter 1 oligopeptide transporter oligopeptide transporter 1;(source:Araport11) Ipc05G0013330 AT1G21320.2 nucleotide binding;nucleic acid binding 0 nucleic acid/nucleotide binding protein;(source:Araport11) Ipc05G0013340 AT4G27745.4 0 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc05G0013350 AT5G24320.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0013360 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0013370 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc05G0013380 AT5G53490.1 Tetratricopeptide repeat (TPR)-like superfamily protein thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0013390 AT4G27780.1 acyl-CoA binding protein 2 Encodes acyl-CoA-binding protein with ankyrin repeats The mRNA is cell-to-cell mobile. acyl-CoA binding protein 2;(source:Araport11) Ipc05G0013400 AT5G42020.1 Heat shock protein 70 (Hsp 70) family protein Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei. Heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc05G0013410 AT5G53480.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc05G0013420 AT5G24314.1 plastid transcriptionally active7 0 plastid transcriptionally active7;(source:Araport11) Ipc05G0013430 AT5G53080.1 Tetratricopeptide repeat (TPR)-like superfamily protein WTG1 is a chloroplast localized TPR protein required for chloroplast biogenesis. Mutants are delayed in greening and defective in splicing petL and ndhG. WTG1 does not itself bind RNA but it does bind known editing factors MORF8 and MORF9. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0013440 #N/A #N/A #N/A #N/A Ipc05G0013450 AT2G46550.2 0 0 transmembrane protein;(source:Araport11) Ipc05G0013460 AT5G53050.3 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0013470 AT5G53045.1 0 0 transcription factor;(source:Araport11) Ipc05G0013480 AT5G24310.1 ABL interactor-like protein 3 One of four ABI-like proteins. ABL interactor-like protein 3;(source:Araport11) Ipc05G0013490 AT5G53030.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0013500 AT5G53020.9 0 0 Ribonuclease P protein subunit P38-like protein;(source:Araport11) Ipc05G0013510 AT5G53000.1 2A phosphatase associated protein of 46 kD PP2A-associated protein with a possible function in the chilling response 2A phosphatase associated protein of 46 kD;(source:Araport11) Ipc05G0013520 AT4G27840.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc05G0013530 AT5G24300.2 Glycogen/starch synthases, ADP-glucose type SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch. Glycogen/starch synthases, ADP-glucose type;(source:Araport11) Ipc05G0013540 AT3G49260.4 0 0 IQ-domain 21;(source:Araport11) Ipc05G0013550 #N/A #N/A #N/A #N/A Ipc05G0013560 AT3G49250.1 defective in meristem silencing 3 Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation. defective in meristem silencing 3;(source:Araport11) Ipc05G0013570 AT5G53350.1 CLP protease regulatory subunit X CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X;(source:Araport11) Ipc05G0013580 AT3G61790.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc05G0013590 AT5G24240.2 0 Encodes PI4Kc3, localizes to the nucleus and has autophosphorylation activity, but no lipid kinase activity. Overexpression mutants display late-flowering phenotype. phosphatidylinositol 4-kinase gamma-like protein;(source:Araport11) Ipc05G0013600 AT5G24230.3 0 0 Lipase class 3-related protein;(source:Araport11) Ipc05G0013610 AT5G53420.1 CCT motif family protein 0 CCT motif family protein;(source:Araport11) Ipc05G0013620 AT5G53450.1 OBP3-responsive gene 1 0 OBP3-responsive protein 1;(source:Araport11) Ipc05G0013630 AT5G67490.1 0 SDHAF4 acts on FAD-SDH1 and promotes its assembly with SDH2, thereby stabilizing SDH2 and enabling its full assembly with SDH3/SDH4 to form the SDH complex. succinate dehydrogenase assembly factor;(source:Araport11) Ipc05G0013640 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0013650 AT5G53110.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0013660 AT5G53120.5 spermidine synthase 3 encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency. spermidine synthase 3;(source:Araport11) Ipc05G0013670 AT3G49160.2 0 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. pyruvate kinase family protein;(source:Araport11) Ipc05G0013680 AT5G53150.6 0 0 DnaJ heat shock amino-terminal domain protein;(source:Araport11) Ipc05G0013690 AT5G51460.4 0 homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatases Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc05G0013700 AT5G53160.2 regulatory components of ABA receptor 3 Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile. regulatory components of ABA receptor 3;(source:Araport11) Ipc05G0013710 AT5G53170.1 FTSH protease 11 encodes an FtsH protease that is localized to the chloroplast and the mitochondrion FTSH protease 11;(source:Araport11) Ipc05G0013720 AT5G53180.1 polypyrimidine tract-binding protein 2 Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination. polypyrimidine tract-binding protein 2;(source:Araport11) Ipc05G0013730 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0013740 AT5G53190.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc05G0013750 AT5G24120.3 0 Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes. sigma factor E;(source:Araport11) Ipc05G0013760 #N/A #N/A #N/A #N/A Ipc05G0013770 AT5G53210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. Its transcript levels change after inducing MUTE expression in a mute background. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0013780 AT5G41480.1 Folylpolyglutamate synthetase family protein Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis. Folylpolyglutamate synthetase family protein;(source:Araport11) Ipc05G0013790 AT5G41761.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0013800 AT4G27940.1 manganese tracking factor for mitochondrial SOD2 0 manganese tracking factor for mitochondrial SOD2;(source:Araport11) Ipc05G0013810 AT5G53190.1 Nodulin MtN3 family protein 0 Nodulin MtN3 family protein;(source:Araport11) Ipc05G0013820 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0013830 AT3G54700.2 0 Encodes Pht1;7, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). phosphate transporter 1;(source:Araport11) Ipc05G0013840 AT5G53280.1 plastid division1 An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site. The mRNA is cell-to-cell mobile. plastid division1;(source:Araport11) Ipc05G0013850 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0013860 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc05G0013870 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc05G0013880 AT4G27960.1 ubiquitin conjugating enzyme 9 ubiquitin conjugating enzyme ubiquitin conjugating enzyme 9;(source:Araport11) Ipc05G0013890 AT5G53310.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc05G0013900 AT4G23740.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0013910 #N/A #N/A #N/A #N/A Ipc05G0013920 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0013930 AT5G52960.1 0 0 tRNA dimethylallyltransferase;(source:Araport11) Ipc05G0013940 AT5G52920.1 plastidic pyruvate kinase beta subunit 1 encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content. The mRNA is cell-to-cell mobile. plastidic pyruvate kinase beta subunit 1;(source:Araport11) Ipc05G0013950 AT5G52910.2 0 homolog of Drosophila timeless timeless family protein;(source:Araport11) Ipc05G0013960 AT5G52900.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc05G0013970 AT5G24030.1 SLAC1 homologue 3 Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. SLAC1 homologue 3;(source:Araport11) Ipc05G0013980 AT5G24030.1 SLAC1 homologue 3 Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. SLAC1 homologue 3;(source:Araport11) Ipc05G0013990 AT2G46170.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc05G0014000 AT1G64080.1 0 Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6). membrane-associated kinase regulator;(source:Araport11) Ipc05G0014010 AT5G52860.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc05G0014020 AT3G16520.3 UDP-glucosyl transferase 88A1 0 UDP-glucosyl transferase 88A1;(source:Araport11) Ipc05G0014030 AT4G11260.1 phosphatase-related Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. phosphatase-like protein;(source:Araport11) Ipc05G0014040 AT5G52810.1 NAD(P)-binding Rossmann-fold superfamily protein SAR-DEFICIENT4 (SARD4) alias ORNITHINE CYCLODEAMINASE/m-CRYSTALLIN (ORNCD1) is involved in the biosynthesis of pipecolic acid. The reductase converts dehydropipecolic acid intermediates generated from L-Lysine by AGD2-LIKE DEFENSE RESPONSE PROTEIN1 (ALD1) to pipecolic acid (PMID:28330936). NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0014050 AT5G52760.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc05G0014060 AT5G52660.2 Homeodomain-like superfamily protein Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Homeodomain-like superfamily protein;(source:Araport11) Ipc05G0014070 AT5G52640.1 heat shock protein 90.1 Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. The mRNA is cell-to-cell mobile. heat shock-like protein;(source:Araport11) Ipc05G0014080 AT4G25720.1 glutaminyl cyclase This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model. glutaminyl cyclase;(source:Araport11) Ipc05G0014090 AT4G25670.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc05G0014100 AT5G52530.3 dentin sialophosphoprotein-related 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc05G0014110 AT5G52510.1 SCARECROW-like 8 0 SCARECROW-like 8;(source:Araport11) Ipc05G0014120 AT4G00350.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc05G0014130 AT5G23940.1 HXXXD-type acyl-transferase family protein Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc05G0014140 AT1G63700.2 0 Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. Protein kinase superfamily protein;(source:Araport11) Ipc05G0014150 AT3G61415.2 SKP1-like 21 0 SKP1-like 21;(source:Araport11) Ipc05G0014160 AT4G25610.3 0 0 C2H2-like zinc finger protein;(source:Araport11) Ipc05G0014170 AT4G25600.1 Oxoglutarate/iron-dependent oxygenase 0 Oxoglutarate/iron-dependent oxygenase;(source:Araport11) Ipc05G0014180 AT3G49050.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0014190 AT3G53740.4 Ribosomal protein L36e family protein 0 Ribosomal protein L36e family protein;(source:Araport11) Ipc05G0014200 AT4G33410.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 0 SIGNAL PEPTIDE PEPTIDASE-LIKE 1;(source:Araport11) Ipc05G0014210 AT5G23870.2 Pectinacetylesterase family protein Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves. Pectinacetylesterase family protein;(source:Araport11) Ipc05G0014220 AT5G23870.2 Pectinacetylesterase family protein Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves. Pectinacetylesterase family protein;(source:Araport11) Ipc05G0014230 AT4G20850.1 tripeptidyl peptidase ii Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant. tripeptidyl peptidase ii;(source:Araport11) Ipc05G0014240 AT5G52400.1 cytochrome P450, family 715, subfamily A, polypeptide 1 member of CYP715A cytochrome P450, family 715, subfamily A, polypeptide 1;(source:Araport11) Ipc05G0014250 AT3G48990.1 AMP-dependent synthetase and ligase family protein Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0014260 AT5G23860.2 tubulin beta 8 beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile. tubulin beta 8;(source:Araport11) Ipc05G0014270 AT5G52380.1 0 0 0 Ipc05G0014280 AT4G25590.1 actin depolymerizing factor 7 0 actin depolymerizing factor 7;(source:Araport11) Ipc05G0014290 AT3G48980.2 0 0 O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11) Ipc05G0014300 AT3G48970.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0014310 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0014320 AT2G05970.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein (DUF295);(source:Araport11) Ipc05G0014330 AT5G23760.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc05G0014340 AT4G25570.1 Cytochrome b561/ferric reductase transmembrane protein family Encodes cytochrome b561. Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11) Ipc05G0014350 AT1G67120.2 0 Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression. midasin-like protein;(source:Araport11) Ipc05G0014360 AT5G23750.2 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc05G0014370 AT5G52260.1 myb domain protein 19 Member of the R2R3 factor gene family. myb domain protein 19;(source:Araport11) Ipc05G0014380 AT4G25550.1 Cleavage/polyadenylation specificity factor, 25kDa subunit 0 Cleavage/polyadenylation specificity factor, 25kDa subunit;(source:Araport11) Ipc05G0014390 AT5G23730.1 Transducin/WD40 repeat-like superfamily protein Encodes REPRESSOR OF UV-B PHOTOMORPHOGENESIS 2 (RUP2). Functions as a repressor of UV-B signaling. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0014400 AT4G25540.1 homolog of DNA mismatch repair protein MSH3 encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G). homolog of DNA mismatch repair protein MSH3;(source:Araport11) Ipc05G0014410 AT4G00585.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0014420 AT5G52240.1 membrane steroid binding protein 1 Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. The mRNA is cell-to-cell mobile. membrane steroid binding protein 1;(source:Araport11) Ipc05G0014430 AT5G52190.1 Sugar isomerase (SIS) family protein 0 Sugar isomerase (SIS) family protein;(source:Araport11) Ipc05G0014440 AT4G33980.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0014450 AT5G62020.1 heat shock transcription factor B2A member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile. heat shock transcription factor B2A;(source:Araport11) Ipc05G0014460 AT5G62040.1 PEBP (phosphatidylethanolamine-binding protein) family protein BFT is a member of The FLOWERING LOCUS T (FT)/TERMINAL FLOWER 1 (TFL1) gene family that encodes regulators involved in control of flower development. PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) Ipc05G0014470 AT5G07270.1 XB3 ortholog 3 in Arabidopsis thaliana 0 hypothetical protein;(source:Araport11) Ipc05G0014480 AT4G00730.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development. Loss of function mutants have increased cell wall polysaccharide content. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc05G0014490 AT1G63120.1 RHOMBOID-like 2 AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. RHOMBOID-like 2;(source:Araport11) Ipc05G0014500 AT5G52160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc05G0014510 AT5G51940.1 RNA polymerase Rpb6 One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630. RNA polymerase Rpb6;(source:Araport11) Ipc05G0014520 AT3G19910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0014530 AT4G00755.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc05G0014540 AT4G25520.2 0 0 SEUSS-like 1;(source:Araport11) Ipc05G0014550 AT5G52110.2 Protein of unknown function (DUF2930) 0 chaperone (DUF2930);(source:Araport11) Ipc05G0014560 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) Ipc05G0014570 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) Ipc05G0014580 AT5G52110.2 Protein of unknown function (DUF2930) 0 chaperone (DUF2930);(source:Araport11) Ipc05G0014590 AT2G25180.1 response regulator 12 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 12;(source:Araport11) Ipc05G0014600 AT5G52060.1 BCL-2-associated athanogene 1 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. BCL-2-associated athanogene 1;(source:Araport11) Ipc05G0014610 AT4G23030.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc05G0014620 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc05G0014630 AT5G51970.2 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc05G0014640 AT1G21840.2 0 Encodes a urease accessory protein which is essential for the activation of plant urease. urease accessory protein F;(source:Araport11) Ipc05G0014650 AT5G51910.2 TCP family transcription factor 0 TCP family transcription factor;(source:Araport11) Ipc05G0014660 AT5G62170.1 0 0 LOW protein: M-phase inducer phosphatase-like protein;(source:Araport11) Ipc05G0014670 AT5G51840.1 0 0 junctophilin-like protein;(source:Araport11) Ipc05G0014680 AT5G51830.2 0 Encodes one of the several Arabidopsis fructokinases. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). Important for seed oil accumulation and vascular development. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc05G0014690 AT4G25420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0000080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0000090 AT4G19530.1 disease resistance protein (TIR-NBS-LRR class) family Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc14G0000100 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc14G0000110 AT4G17350.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 3 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc14G0000120 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0000130 AT1G65040.2 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc14G0000140 AT5G47380.4 0 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc14G0000150 AT2G43250.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0000160 AT4G16640.1 Matrixin family protein 0 Matrixin family protein;(source:Araport11) Ipc14G0000170 AT5G47460.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0000180 AT1G02040.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc14G0000190 AT3G60580.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc14G0000200 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0000210 #N/A #N/A #N/A #N/A Ipc14G0000220 #N/A #N/A #N/A #N/A Ipc14G0000230 AT2G18030.2 Peptide methionine sulfoxide reductase family protein 0 Peptide methionine sulfoxide reductase family protein;(source:Araport11) Ipc14G0000240 AT5G24820.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0000250 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc14G0000260 AT5G44470.1 0 0 ribonuclease H superfamily polynucleotidyl transferase;(source:Araport11) Ipc14G0000270 AT1G55000.3 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc14G0000280 AT4G17300.2 0 Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11) Ipc14G0000290 AT3G62330.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0000300 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc14G0000310 AT3G03490.1 peroxin 19-1 Encodes one of two PEX19 peroxin isoforms, a cytosolic chaperone for peroxisome membrane proteins (PMPs) that delivers PMPs to the endoplasmic reticulum or peroxisomal membrane. It is predominantly cytosolic, forms dimers, promotes peroxisome function and is essential for viability. The protein is farnesylated in vivo through the actions of ERA1 and PLP. peroxin 19-1;(source:Araport11) Ipc14G0000320 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000050 AT4G16600.1 Nucleotide-diphospho-sugar transferases superfamily protein 0 Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc14G0000330 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc14G0000340 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc14G0000350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000100 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0000090 AT4G35560.1 Transducin/WD40 repeat-like superfamily protein Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0000080 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc05G0000070 AT3G51620.3 0 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc05G0000060 AT1G60110.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc05G0000050 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0000040 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0000030 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0000020 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0000010 AT4G22660.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein (DUF295);(source:Araport11) Ipc14G0016500 AT2G31280.1 conserved peptide upstream open reading frame 7 Encodes a LHW-like protein with 80% amino acid identity to LHW. transcription factor bHLH155-like protein;(source:Araport11) Ipc14G0016510 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc14G0016520 AT4G17830.1 Peptidase M20/M25/M40 family protein NAOD encodes a functional acetylornithine deacetylase. Silenced lines plants flower early but have reduced fertility (siliques do not develop) as well as reduced ornithine levels.NAOD mediates a linear pathway for ornithine biosynthesis. Peptidase M20/M25/M40 family protein;(source:Araport11) Ipc14G0016530 AT1G70000.2 myb-like transcription factor family protein Encodes a MYB-like Domain transcription factor that plays a positive role in anthocyanin accumulation in response to light and cytokinin via repression of MYBL2.MYBD expression increased in response to light or cytokinin, and MYBD enhanced anthocyanin biosynthesis via the repression of MYBL2 encoding for a transcription factor that had a negative effect on this process. In addition, MYBD can bind in vivo to the MYBL2 promoter and a lower level of histone H3K9 acetylation (H3K9ac) at upstream region of MYBL2 in MYBD-OX in comparison to wild-type plants, implies that MYBD represses MYBL2 expression via an epigenetic mechanism. myb-like transcription factor family protein;(source:Araport11) Ipc14G0016540 #N/A #N/A #N/A #N/A Ipc14G0016550 AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc14G0016560 AT2G03150.2 0 Encodes a nuclear-localized calcium-binding protein RSA1 (SHORT ROOT IN SALT MEDIUM 1), which is required for salt tolerance. ATP/GTP-binding protein family;(source:Araport11) Ipc14G0016570 AT2G35270.1 Predicted AT-hook DNA-binding family protein Direct target of AGAMOUS. Regulates patterning and differentiation of reproductive organs. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc14G0016580 AT2G35290.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0016590 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0016600 AT4G17950.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc14G0016610 AT5G46630.1 Clathrin adaptor complexes medium subunit family protein clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc14G0016620 AT3G54380.1 SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0 SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11) Ipc14G0016630 AT1G32560.1 Late embryogenesis abundant protein, group 1 protein Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Late embryogenesis abundant protein, group 1 protein;(source:Araport11) Ipc14G0016640 AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein Promotes the splicing of chloroplast group II introns. RNA-binding CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc14G0016650 AT1G32540.1 lsd one like 1 Encodes a protein with 3 plant-specific zinc finger domains that acts as a positive regulator of cell death. lsd one like 1;(source:Araport11) Ipc14G0016660 AT2G35320.1 EYES ABSENT homolog homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent. eyes absent-like protein;(source:Araport11) Ipc14G0016670 AT4G17030.1 expansin-like B1 Encodes EXLB1 (expansin-like B1), a member of the expansin family. expansin-like B1;(source:Araport11) Ipc14G0016680 AT2G17440.1 plant intracellular ras group-related LRR 5 Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. The mRNA is cell-to-cell mobile. plant intracellular ras group-related LRR 5;(source:Araport11) Ipc14G0016690 AT4G17970.1 aluminum-activated, malate transporter 12 Anion transporter involved in stomatal closure. Gene has 3 splicing variants. aluminum-activated, malate transporter 12;(source:Araport11) Ipc14G0016700 AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc14G0016710 AT5G59190.1 subtilase family protein 0 subtilase family protein;(source:Araport11) Ipc14G0016720 AT4G33160.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc14G0016730 AT1G32520.1 0 0 TLDc domain protein;(source:Araport11) Ipc14G0016740 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc14G0016750 AT1G32440.1 plastidial pyruvate kinase 3 encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant. plastidial pyruvate kinase 3;(source:Araport11) Ipc14G0016760 AT3G57990.1 0 Encodes a ß-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose. hypothetical protein;(source:Araport11) Ipc14G0016770 AT3G57990.1 0 Encodes a ß-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose. hypothetical protein;(source:Araport11) Ipc14G0016780 AT3G57990.1 0 Encodes a ß-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose. hypothetical protein;(source:Araport11) Ipc14G0016790 AT5G15685.1 0 0 mutator transposase MUDRA protein;(source:Araport11) Ipc14G0016800 AT1G32370.3 tobamovirus multiplication 2B Encodes a 122 amino acid basic protein involved in tobamovirus multiplication in planta. The mRNA is cell-to-cell mobile. tobamovirus multiplication 2B;(source:Araport11) Ipc14G0016810 AT2G35390.2 Phosphoribosyltransferase family protein 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc14G0016820 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0016830 AT3G17150.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc14G0016840 AT4G12760.1 0 0 RPA-interacting protein A;(source:Araport11) Ipc14G0016850 AT1G15870.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc14G0016860 AT4G25300.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0016870 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0016880 AT4G18010.1 myo-inositol polyphosphate 5-phosphatase 2 Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays. myo-inositol polyphosphate 5-phosphatase 2;(source:Araport11) Ipc14G0016890 AT1G17940.2 0 0 Endosomal targeting BRO1-like domain-containing protein;(source:Araport11) Ipc04G0019480 AT4G13930.1 serine hydroxymethyltransferase 4 Encodes a serine hydroxymethyltransferase maximally expressed in root serine hydroxymethyltransferase 4;(source:Araport11) Ipc04G0019470 AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0019460 AT2G31970.1 DNA repair-recombination protein (RAD50) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1. DNA repair-recombination protein (RAD50);(source:Araport11) Ipc04G0019450 AT4G13870.2 Werner syndrome-like exonuclease Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity. Werner syndrome-like exonuclease;(source:Araport11) Ipc04G0019440 AT4G13870.2 Werner syndrome-like exonuclease Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity. Werner syndrome-like exonuclease;(source:Araport11) Ipc04G0019430 AT3G23820.1 UDP-D-glucuronate 4-epimerase 6 Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. The mRNA is cell-to-cell mobile. UDP-D-glucuronate 4-epimerase 6;(source:Araport11) Ipc04G0019420 AT2G46260.1 BTB/POZ/Kelch-associated protein Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. BTB/POZ/Kelch-associated protein;(source:Araport11) Ipc04G0019410 AT5G48610.5 0 0 myb-like protein X;(source:Araport11) Ipc04G0019400 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc04G0019390 AT2G17340.1 Uncharacterised conserved protein (UCP030210) 0 pantothenate kinase;(source:Araport11) Ipc04G0019380 AT4G18905.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0019370 AT4G18905.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0019360 AT2G31740.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0019350 AT5G49210.2 0 0 stress response NST1-like protein;(source:Araport11) Ipc04G0019340 AT5G49020.1 protein arginine methyltransferase 4A Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. protein arginine methyltransferase 4A;(source:Araport11) Ipc04G0019330 AT4G15802.1 heat shock factor binding protein Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment. heat shock factor binding protein;(source:Araport11) Ipc04G0019320 AT4G15800.1 ralf-like 33 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile. ralf-like 33;(source:Araport11) Ipc04G0019310 AT3G30340.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc04G0019300 AT1G63310.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0019290 AT3G16560.4 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0019280 AT5G27690.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0019270 AT4G15790.1 0 0 uveal autoantigen with coiled-coil/ankyrin;(source:Araport11) Ipc04G0019260 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc04G0019250 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc04G0019240 AT3G16510.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc04G0019230 AT5G48970.1 Mitochondrial substrate carrier family protein Encodes a mitochondrial thiamin diphosphate carrier. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc04G0019220 AT1G65450.1 HXXXD-type acyl-transferase family protein Contains dual transcription units and alternative splicing that could rescue the sterility defect of glc mutants. Shares homology to BAHD (for BEAT, AHCT, HCBT, and DAT) acyl-transferases. Functions in double fertilization. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc04G0019210 AT4G14540.1 nuclear factor Y, subunit B3 0 nuclear factor Y, subunit B3;(source:Araport11) Ipc04G0019200 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc04G0019190 AT3G21420.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein LATERAL BRANCHING OXIDOREDUCTASE (LBO), encodes an oxidoreductase-like enzyme of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily. It is involved in the biosynthesis of strigolactones. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0019180 AT3G62900.3 0 0 CW-type Zinc Finger;(source:Araport11) Ipc04G0019170 AT1G09020.1 homolog of yeast sucrose nonfermenting 4 Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. sucrose nonfermenting-like protein;(source:Araport11) Ipc04G0019160 AT3G21430.4 0 0 DNA binding protein;(source:Araport11) Ipc04G0019150 AT2G47850.3 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0019140 AT3G26700.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0019130 AT5G18590.2 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc04G0019120 AT5G18600.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc04G0019110 AT3G21460.1 Glutaredoxin family protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Glutaredoxin family protein;(source:Araport11) Ipc04G0019100 AT3G06400.2 chromatin-remodeling protein 11 Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. Double mutation in CHR17 and CHR11 results in the loss of the evenly spaced nucleosome pattern in gene bodies, but does not affect nucleosome density. chromatin-remodeling protein 11;(source:Araport11) Ipc04G0019090 AT5G18650.1 CHY-type/CTCHY-type/RING-type Zinc finger protein Encodes a RING-type E3 ubiquitin ligase that interacts with and ubiquitinates MYB30, leads to MYB30 proteasomal degradation and downregulation of its transcriptional activity. Since MYB30 is a positive regulator of Arabidopsis HR and defence responses, MIEL1 is involved in the negative regulation of these processes. The mRNA is cell-to-cell mobile. CHY-type/CTCHY-type/RING-type Zinc finger protein;(source:Araport11) Ipc04G0019080 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc04G0019070 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc04G0019060 AT5G59240.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc04G0019050 AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc04G0019040 AT3G51270.4 0 0 protein serine/threonine kinase;(source:Araport11) Ipc04G0019030 AT3G59920.1 RAB GDP dissociation inhibitor 2 RAB GDP DISSOCIATION INHIBITOR 2 The mRNA is cell-to-cell mobile. RAB GDP dissociation inhibitor 2;(source:Araport11) Ipc04G0019020 AT3G59910.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc04G0019010 AT2G44080.1 ARGOS-like Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1. The mRNA is cell-to-cell mobile. ARGOS-like protein;(source:Araport11) Ipc04G0019000 AT2G44060.2 Late embryogenesis abundant protein, group 2 0 Late embryogenesis abundant protein, group 2;(source:Araport11) Ipc04G0018990 AT3G02050.1 K+ uptake transporter 3 potassium transporter KUP3p (KUP3) K+ uptake transporter 3;(source:Araport11) Ipc04G0018980 AT2G44050.1 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway. The mRNA is cell-to-cell mobile. 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase;(source:Araport11) Ipc04G0018970 AT2G31870.1 Poly (ADP-ribose) glycohydrolase (PARG) The gene encodes a poly(ADPribose) glycohydrolase (PARG1). Mutant analysis suggests that PARG1 plays a role in abiotic stress responses and DNA repair. Loss of function mutants accumulate poly(ADPribose) and have increased cell death when treated with bleomycin. Poly (ADP-ribose) glycohydrolase (PARG);(source:Araport11) Ipc04G0018960 AT3G59880.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0018950 AT2G43990.1 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc04G0018940 AT1G05620.1 uridine-ribohydrolase 2 Encodes a cytosolic inosine nucleoside hydrolase. It forms a heterocomplex with NSH1 with almost two orders of magnitude higher catalytic efficiency for xanthosine hydrolysis than observed for NSH1 alone. Transcript levels for this gene are elevated in older leaves suggesting that it may play a role in purine catabolism during senescence. uridine-ribohydrolase 2;(source:Araport11) Ipc04G0018930 AT2G43970.1 RNA-binding protein 0 RNA-binding protein;(source:Araport11) Ipc04G0018920 AT3G59990.4 methionine aminopeptidase 2B Encodes a MAP2 like methionine aminopeptidase methionine aminopeptidase 2B;(source:Araport11) Ipc04G0018910 AT2G44160.1 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase MTHFR2 mRNA, complete The mRNA is cell-to-cell mobile. methylenetetrahydrofolate reductase 2;(source:Araport11) Ipc04G0018900 AT5G18280.1 apyrase 2 Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. apyrase 2;(source:Araport11) Ipc04G0018890 AT5G60870.1 Regulator of chromosome condensation (RCC1) family protein Encodes a mitochondrial protein RUG3 that is required for accumulation of mitochondrial respiratory chain complex I. RUG3 is related to human REGULATOR OF CHROMOSOME CONDENSATION 1 (RCC1) and Arabidopsis UV-B RESISTANCE 8 (UVR8). Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc04G0018880 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc04G0018860 AT1G75340.3 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0018870 AT1G61730.1 DNA-binding storekeeper protein-related transcriptional regulator 0 DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc04G0018850 AT5G58130.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0018840 AT5G58110.1 chaperone binding;ATPase activators 0 chaperone binding / ATPase activator;(source:Araport11) Ipc04G0018830 AT3G13050.4 0 Encodes a plant nicotinate transporter than can also transport trigonelline (N-methylnicotinate). Major facilitator superfamily protein;(source:Araport11) Ipc04G0018820 AT3G13050.4 0 Encodes a plant nicotinate transporter than can also transport trigonelline (N-methylnicotinate). Major facilitator superfamily protein;(source:Araport11) Ipc04G0018810 AT5G58100.2 0 0 transmembrane protein;(source:Araport11) Ipc04G0018800 AT3G18880.2 0 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc04G0018790 AT4G31040.1 CemA-like proton extrusion protein-related 0 CemA-like proton extrusion protein-like protein;(source:Araport11) Ipc04G0018780 AT3G13060.2 evolutionarily conserved C-terminal region 5 0 evolutionarily conserved C-terminal region 5;(source:Araport11) Ipc04G0018770 AT4G18240.1 starch synthase 4 Encodes a starch synthase. In Arabidopsis leaves, the catalytic C-terminal region of STARCH SYNTHASE 4 promotes starch granule initiation while its non-catalytic N-terminal region determines starch granules morphology. starch synthase 4;(source:Araport11) Ipc04G0018760 AT4G31170.8 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0018750 AT2G07360.1 SH3 domain-containing protein TPLATE-associated SH3 domain containing protein. SH3 domain-containing protein;(source:Araport11) Ipc04G0018740 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc04G0018730 AT1G78960.3 0 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. lupeol synthase 2;(source:Araport11) Ipc04G0018720 AT2G07180.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0018710 AT2G07170.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0018700 AT2G26590.3 regulatory particle non-ATPase 13 0 regulatory particle non-ATPase 13;(source:Araport11) Ipc04G0018690 AT5G35390.1 Leucine-rich repeat protein kinase family protein Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0018680 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc04G0018670 AT1G19220.1 auxin response factor 19 Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin. auxin response factor 19;(source:Araport11) Ipc04G0018660 AT4G21323.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc04G0018650 AT5G35330.4 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 02;(source:Araport11) Ipc04G0018640 AT1G21651.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc04G0018630 AT1G21650.2 Preprotein translocase SecA family protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. Preprotein translocase SecA family protein;(source:Araport11) Ipc04G0018620 AT1G77330.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0018610 AT1G21640.1 NAD kinase 2 Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin. NAD kinase 2;(source:Araport11) Ipc04G0018600 AT1G55200.4 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc04G0018590 AT3G57320.1 0 0 threonine-tRNA ligase 2;(source:Araport11) Ipc04G0018580 AT2G07360.1 SH3 domain-containing protein TPLATE-associated SH3 domain containing protein. SH3 domain-containing protein;(source:Araport11) Ipc04G0018570 AT1G76980.1 0 0 patatin-like phospholipase domain protein;(source:Araport11) Ipc04G0018560 AT3G26540.1 Tetratricopeptide repeat (TPR)-like superfamily protein RGFR3 is a leucine-­rich repeat receptor kinase that, together with RGFR1 and RGFR2, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0018550 AT1G21400.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein 0 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein;(source:Araport11) Ipc04G0018540 AT4G08455.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc04G0018530 AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein 0 RING/FYVE/PHD-type zinc finger family protein;(source:Araport11) Ipc04G0018520 AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases 0 putative DEAD-box ATP-dependent RNA helicase 29;(source:Araport11) Ipc04G0018510 AT1G17950.1 myb domain protein 52 putative transcription factor: R2R3-MYB transcription family myb domain protein 52;(source:Araport11) Ipc04G0018500 AT1G31130.1 0 0 polyadenylate-binding protein 1-B-binding protein;(source:Araport11) Ipc04G0018490 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc04G0018480 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0018470 AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases 0 putative DEAD-box ATP-dependent RNA helicase 29;(source:Araport11) Ipc04G0018460 #N/A #N/A #N/A #N/A Ipc04G0018450 AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases 0 putative DEAD-box ATP-dependent RNA helicase 29;(source:Araport11) Ipc04G0018440 AT1G77020.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc14G0000460 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc14G0000470 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0001030 AT4G22540.5 0 0 OSBP(oxysterol binding protein)-related protein 2A;(source:Araport11) Ipc14G0001020 AT5G09880.1 Splicing factor, CC1-like 0 Splicing factor, CC1-like protein;(source:Araport11) Ipc14G0001010 AT1G12110.1 nitrate transporter 1.1 Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium. Affects flowering time via interaction with the FLC dependent flowering pathway to influence its target gene FT. nitrate transporter 1.1;(source:Araport11) Ipc14G0001000 AT3G53500.3 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc14G0000990 AT2G31800.1 Integrin-linked protein kinase family 0 Integrin-linked protein kinase family;(source:Araport11) Ipc14G0000980 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0000970 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0000960 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc14G0000950 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc14G0000940 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0000930 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc14G0000920 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc03G0000690 AT1G15780.2 0 0 mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11) Ipc03G0000700 AT3G07500.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc03G0000710 AT2G21470.2 SUMO-activating enzyme 2 Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 2;(source:Araport11) Ipc03G0000720 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000730 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000740 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000160 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc03G0000170 AT2G14850.1 0 0 transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11) Ipc03G0000180 AT1G77510.1 PDI-like 1-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner. PDI-like 1-2;(source:Araport11) Ipc03G0000200 AT3G14880.2 0 0 transcription factor-like protein;(source:Araport11) Ipc03G0000210 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000220 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000230 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc03G0000240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000250 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc03G0000260 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0000270 AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc03G0000190 AT1G77510.1 PDI-like 1-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner. PDI-like 1-2;(source:Araport11) Ipc03G0000280 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0015840 AT2G17010.1 Mechanosensitive ion channel family protein MSL8 encodes a protein with similarity to mechano-sensitive channel proteins. MSL8 is expressed specifically in pollen and germinating pollen tubes.It regulates pollen germination and is needed to maintain cellular integrity during pollen hydration and germination. Mechanosensitive ion channel family protein;(source:Araport11) Ipc07G0015850 AT5G10460.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc07G0015860 AT2G30860.1 glutathione S-transferase PHI 9 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase PHI 9;(source:Araport11) Ipc07G0015870 AT3G61530.2 Phosphoenolpyruvate carboxylase family protein Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Phosphoenolpyruvate carboxylase family protein;(source:Araport11) Ipc07G0015880 AT2G39970.1 Mitochondrial substrate carrier family protein Encodes peroxisomal membrane protein 38 (PMP38). Mutation in this protein results in enlargement of peroxisomes. Delivers NAD+ for optimal fatty acid degradation during storage oil mobilization. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc07G0015890 AT5G42400.8 0 Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C. SET domain protein 25;(source:Araport11) Ipc07G0015900 AT3G19770.1 Vacuolar sorting protein 9 (VPS9) domain Guanine nucleotide exchange factor VPS9a. Can activate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development. Vacuolar sorting protein 9 (VPS9) domain-containing protein;(source:Araport11) Ipc07G0015910 AT1G76660.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0015920 AT5G53010.1 calcium-transporting ATPase, putative 0 calcium-transporting ATPase;(source:Araport11) Ipc07G0015930 AT5G42370.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc07G0015940 AT4G35410.2 Clathrin adaptor complex small chain family protein 0 Clathrin adaptor complex small chain family protein;(source:Araport11) Ipc07G0015950 AT1G21000.2 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc07G0015960 AT1G20980.1 squamosa promoter binding protein-like 14 Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture. The mRNA is cell-to-cell mobile. squamosa promoter binding protein-like 14;(source:Araport11) Ipc07G0015970 AT1G20970.1 0 0 calponin-like domain protein;(source:Araport11) Ipc07G0015980 AT1G76570.1 Chlorophyll A-B binding family protein 0 Chlorophyll A-B binding family protein;(source:Araport11) Ipc07G0015990 AT1G20960.2 U5 small nuclear ribonucleoprotein helicase, putative Similar to DEAD/DExH box ATP-dependent RNA helicase . Required for proper splicing of FLC. Mutants have reduced FLC levels and are early flowering. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc07G0016000 AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc07G0016010 AT1G25360.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0016020 AT4G39235.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0016030 AT3G16380.1 poly(A) binding protein 6 polyadenylate-binding protein, putative / PABP, putative, similar to polyadenylate-binding protein (poly(A)-binding protein) from {Arabidopsis thaliana} SP:P42731, (Cucumis sativus) GI:7528270, {Homo sapiens} SP:Q13310, {Arabidopsis thaliana} SP:Q05196; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM). Member of the class III family of PABP proteins. poly(A) binding protein 6;(source:Araport11) Ipc07G0016040 AT2G36660.1 poly(A) binding protein 7 polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins. poly(A) binding protein 7;(source:Araport11) Ipc07G0016050 AT1G20930.1 cyclin-dependent kinase B2;2 Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. cyclin-dependent kinase B2;(source:Araport11) Ipc07G0016060 AT1G20925.1 Auxin efflux carrier family protein 0 Auxin efflux carrier family protein;(source:Araport11) Ipc07G0016070 AT3G52660.3 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0016080 AT1G76500.1 Predicted AT-hook DNA-binding family protein Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc07G0016090 #N/A #N/A #N/A #N/A Ipc07G0016100 AT2G33585.1 0 0 subtilisin-like protease;(source:Araport11) Ipc07G0016110 AT5G58800.2 Quinone reductase family protein 0 Quinone reductase family protein;(source:Araport11) Ipc07G0016120 AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0016130 AT4G35350.1 xylem cysteine peptidase 1 tracheary element vacuolar protein xylem cysteine peptidase 1;(source:Araport11) Ipc07G0016140 AT1G55150.2 0 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc07G0016150 AT5G51350.1 Leucine-rich repeat transmembrane protein kinase family protein Encodes a receptor-like kinase that represses secondary growth, the production of secondary vascular tissues. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc07G0016160 AT4G35300.8 0 0 tonoplast monosaccharide transporter2;(source:Araport11) Ipc07G0016170 AT1G20830.1 multiple chloroplast division site 1 Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020). multiple chloroplast division site 1;(source:Araport11) Ipc07G0016180 AT1G76410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0016190 AT1G76405.2 0 0 outer envelope pore 21B-like protein;(source:Araport11) Ipc07G0016200 AT1G76400.1 Ribophorin I 0 Ribophorin I;(source:Araport11) Ipc07G0016210 AT4G26830.2 0 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc07G0016220 AT2G17520.1 Endoribonuclease/protein kinase IRE1-like Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. The mRNA is cell-to-cell mobile. Endoribonuclease/protein kinase IRE1-like protein;(source:Araport11) Ipc07G0016230 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc07G0016240 AT2G30280.1 RNA-directed DNA methylation 4 Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development. RNA-directed DNA methylation 4;(source:Araport11) Ipc07G0016270 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0016250 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0016260 AT5G62250.2 0 0 microtubule-associated protein 65-9;(source:Araport11) Ipc07G0016280 AT1G42960.1 0 expressed protein localized to the inner membrane of the chloroplast. inner membrane localized protein;(source:Araport11) Ipc07G0016290 AT1G42970.1 glyceraldehyde-3-phosphate dehydrogenase B subunit Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers. The mRNA is cell-to-cell mobile. glyceraldehyde-3-phosphate dehydrogenase B subunit;(source:Araport11) Ipc07G0016300 AT1G11310.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in A. thaliana does not involve the signaling molecules ethylene, jasmonic acid or salicylic acid, but requires a syntaxin, glycosyl hydrolase and ABC transporter. It is a novel virulence target of the P. syringae type III secreted effector HopZ2. Seven transmembrane MLO family protein;(source:Araport11) Ipc07G0016310 AT2G30280.1 RNA-directed DNA methylation 4 Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development. RNA-directed DNA methylation 4;(source:Araport11) Ipc07G0016320 AT2G33640.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc07G0016330 AT2G33670.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc07G0016340 AT1G20810.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc07G0016350 AT1G69830.1 alpha-amylase-like 3 Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. alpha-amylase-like 3;(source:Araport11) Ipc07G0016360 AT3G58720.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0016370 AT2G33700.1 Protein phosphatase 2C family protein Encodes a putative protein phosphatase 2C that positively regulates salt tolerance in abscisic acid-dependent manner. Protein phosphatase 2C family protein;(source:Araport11) Ipc07G0016380 AT5G42360.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc07G0016390 AT1G76390.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc07G0016400 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0016410 AT1G20760.1 Calcium-binding EF hand family protein EH domain containing protein. Calcium-binding EF hand family protein;(source:Araport11) Ipc07G0016420 AT4G02060.2 Minichromosome maintenance (MCM2/3/5) family protein Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc07G0016430 AT5G22130.2 mannosyltransferase family protein member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc07G0016440 AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc07G0016450 AT1G20720.2 0 0 RAD3-like DNA-binding helicase protein;(source:Araport11) Ipc07G0016460 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0016470 AT5G67020.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0016480 AT5G42330.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0016490 AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes the catalytic core of the dolichol phosphate mannase synthase (DPMS) complex. It is not active on its own but requires the presence of DPMS2 and DPMS3 for full activity. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis, influences development, stress response, and ammonium hypersensitivity. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc07G0016500 AT2G30600.4 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc07G0016510 AT2G33630.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0016520 AT1G20610.1 Cyclin B2;3 0 Cyclin B2;(source:Araport11) Ipc07G0016530 AT1G13120.1 0 0 nucleoporin GLE1-like protein;(source:Araport11) Ipc07G0016540 AT4G35090.1 catalase 2 Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2). catalase 2;(source:Araport11) Ipc07G0016550 AT1G76350.4 0 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc07G0016560 AT1G42470.1 Patched family protein 0 Patched family protein;(source:Araport11) Ipc07G0016570 AT1G76360.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0016580 AT3G18200.2 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0016590 AT1G20670.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc07G0016600 AT4G38260.1 Protein of unknown function (DUF833) 0 transport/golgi organization-like protein (DUF833);(source:Araport11) Ipc07G0016610 AT1G20693.3 high mobility group B2 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B2;(source:Araport11) Ipc07G0016620 AT3G12990.2 ribonuclease PH45A Encodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis. ribonuclease PH45A;(source:Araport11) Ipc07G0016630 AT1G76210.1 Arabidopsis protein of unknown function (DUF241) 0 DUF241 domain protein, putative (DUF241);(source:Araport11) Ipc07G0016640 AT4G38440.1 0 Encodes MINIYO (IYO), a positive regulator of transcriptional elongation that is essential for cells to initiate differentiation. RPAP1-like, carboxy-terminal protein;(source:Araport11) Ipc07G0016650 AT5G40820.4 0 Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al. Ataxia telangiectasia-mutated and RAD3-like protein;(source:Araport11) Ipc07G0016660 AT5G42270.1 FtsH extracellular protease family VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Phosphorylation of this protein is dependent on calcium. The mRNA is cell-to-cell mobile. FtsH extracellular protease family;(source:Araport11) Ipc07G0016670 AT1G76240.1 Arabidopsis protein of unknown function (DUF241) 0 DUF241 domain protein (DUF241);(source:Araport11) Ipc07G0016680 AT1G42430.1 0 Novel plant specific, chloroplast localized protein that is involved in regulation of starch degradation. inactive purple acid phosphatase-like protein;(source:Araport11) Ipc07G0016690 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0016700 AT1G76270.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc07G0016710 AT5G42320.2 0 0 Zn-dependent exopeptidases superfamily protein;(source:Araport11) Ipc07G0016720 AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf106 0 Bacterial sec-independent translocation protein mttA/Hcf106;(source:Araport11) Ipc07G0016730 AT1G08780.1 ABI3-interacting protein 3 0 ABI3-interacting protein 3;(source:Araport11) Ipc07G0016740 AT5G28770.1 bZIP transcription factor family protein BASIC LEUCINE ZIPPER protein which regulates the circadian oscillator gene PSEUDO RESPONSE REGULATOR7 (PRR7) to change the circadian phase in response to sugars. It upregulates PRR7 in response to low energy. bZIP63 and PRR7 are required for correct oscillator phase under light/dark cycles. bZIP protein BZO2H3 mRNA, partial cds bZIP transcription factor family protein;(source:Araport11) Ipc07G0016750 AT5G59030.1 copper transporter 1 encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains copper transporter 1;(source:Araport11) Ipc07G0016760 AT5G40240.3 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0016770 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc07G0016780 AT3G28050.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0016790 AT5G40240.3 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0016800 AT1G70260.1 nodulin MtN21 /EamA-like transporter family protein Encodes an endoplasmic reticulum (ER)-localized nodulin MtN21-like transporter family protein that negatively regulates resistance against biotrophic pathogens but not the necrotrophic pathogen, B. cinerea, possibly by regulating ROS production, cell death and PR1 expression. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc07G0016810 AT5G28830.1 calcium-binding EF hand family protein 0 calcium-binding EF hand family protein;(source:Araport11) Ipc07G0016820 AT4G29250.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0016830 AT4G29250.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0016840 AT4G14750.1 IQ-domain 19 0 IQ-domain 19;(source:Araport11) Ipc07G0016850 AT1G54510.4 0 Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. NIMA-related serine/threonine kinase 1;(source:Araport11) Ipc07G0016860 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0016870 AT2G20540.2 0 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 21;(source:Araport11) Ipc07G0016880 AT5G58140.7 0 Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.The mRNA is cell-to-cell mobile. phototropin 2;(source:Araport11) Ipc07G0016890 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0016900 AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0016910 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc07G0016920 AT1G13910.2 0 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc07G0016930 AT5G10020.2 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc07G0016940 AT4G19050.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0016950 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc07G0016960 AT1G03010.2 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc07G0016970 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc07G0016980 AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc07G0016990 AT5G56030.1 heat shock protein 81-2 A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. The mRNA is cell-to-cell mobile. heat shock protein 81-2;(source:Araport11) Ipc07G0017000 AT1G58400.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0017010 AT3G59970.1 methylenetetrahydrofolate reductase 1 methylenetetrahydrofolate reductase MTHFR1 mRNA, complete methylenetetrahydrofolate reductase 1;(source:Araport11) Ipc07G0017020 AT5G38565.1 F-box/FBD-like domains containing protein 0 F-box/FBD-like domains containing protein;(source:Araport11) Ipc07G0017030 AT5G28150.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc07G0017040 AT3G04870.4 0 Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene. zeta-carotene desaturase;(source:Araport11) Ipc07G0017050 AT3G16630.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Kinesin-13A localized to entire Golgi stacks. Involved in trichome development. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0017060 #N/A #N/A #N/A #N/A Ipc07G0017070 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0017080 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc07G0017090 AT3G04910.1 with no lysine (K) kinase 1 Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm. with no lysine (K) kinase 1;(source:Araport11) Ipc07G0017100 AT5G28060.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc07G0017110 AT5G28050.1 Cytidine/deoxycytidylate deaminase family protein 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc07G0017120 AT5G28050.1 Cytidine/deoxycytidylate deaminase family protein 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc07G0017130 AT5G28040.2 0 Member of the GeBP/GPL family of leucine zipper transcription factors. VPF4 interacts with the F-box proteins from A.tumefaciens VirF and VBF. Over expression results in decreased tumor formation upon Agrobacterium infection. Mutants show changes in the level of expression of defense response genes. DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11) Ipc07G0017140 #N/A #N/A #N/A #N/A Ipc07G0017150 AT1G62880.1 Cornichon family protein 0 Cornichon family protein;(source:Araport11) Ipc07G0017160 AT1G54500.1 Rubredoxin-like superfamily protein RBD1 is a thylakoid membrane-bound iron-binding protein that is required for the proper assembly of photosystem II in Arabidopsis. It is found in all oxygenic photoautotrophic organisms (plants, algae and cyanobacteria). Rubredoxin-like superfamily protein;(source:Araport11) Ipc07G0017170 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc07G0017180 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc07G0017190 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0017200 AT3G53350.3 ROP interactive partner 4 Encodes RIP3 (ROP interactive partner 3), a microtubule-binding protein that is anchored to the plasma membrane domains and promotes local microtubule disassembly, forming as specific pattern of secondary walls in xylem vessel cells. Localized at microtubules and interacts with the plant-specific kinesin AtKinesin-13A. ROP interactive partner 4;(source:Araport11) Ipc07G0017210 AT1G04950.3 TATA BOX ASSOCIATED FACTOR II 59 Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant. TATA BOX ASSOCIATED FACTOR II 59;(source:Araport11) Ipc07G0017220 AT5G20860.2 0 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0017230 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0002220 AT3G45900.1 Ribonuclease P protein subunit P38-related 0 Ribonuclease P protein subunit P38-like protein;(source:Araport11) Ipc09G0002230 AT1G16160.1 wall associated kinase-like 5 WAK-like kinase The mRNA is cell-to-cell mobile. wall associated kinase-like 5;(source:Araport11) Ipc09G0002240 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002250 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002260 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002270 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002280 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002290 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0002300 AT1G48635.1 peroxin 3 0 peroxin 3;(source:Araport11) Ipc09G0002310 AT4G19160.2 0 0 transglutaminase family protein;(source:Araport11) Ipc09G0002320 AT4G19170.1 nine-cis-epoxycarotenoid dioxygenase 4 chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase The mRNA is cell-to-cell mobile. nine-cis-epoxycarotenoid dioxygenase 4;(source:Araport11) Ipc09G0002330 AT4G19185.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc09G0002340 AT1G33020.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc09G0002350 AT1G31770.1 ATP-binding cassette 14 0 ATP-binding cassette 14;(source:Araport11) Ipc09G0002360 AT4G19190.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0002370 AT2G35605.1 SWIB/MDM2 domain superfamily protein 0 SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc09G0002380 AT1G79690.2 0 0 nudix hydrolase homolog 3;(source:Araport11) Ipc09G0002390 AT4G23470.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc09G0002400 AT4G19230.1 cytochrome P450, family 707, subfamily A, polypeptide 1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. cytochrome P450, family 707, subfamily A, polypeptide 1;(source:Araport11) Ipc09G0002410 AT1G31730.1 Adaptin family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Adaptin family protein;(source:Araport11) Ipc09G0002420 AT1G26110.2 decapping 5 Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development. decapping 5;(source:Araport11) Ipc09G0002430 AT4G19380.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc09G0002440 AT2G35612.1 0 0 copper amine oxidase family protein;(source:Araport11) Ipc09G0002450 AT4G19390.1 Uncharacterised protein family (UPF0114) 0 Uncharacterized protein family (UPF0114);(source:Araport11) Ipc09G0002460 AT1G22730.1 MA3 domain-containing protein 0 MA3 domain-containing protein;(source:Araport11) Ipc09G0002470 AT5G45320.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc09G0002480 AT4G31340.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc09G0002490 AT5G07660.1 structural maintenance of chromosomes 6A Encodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage. structural maintenance of chromosomes 6A;(source:Araport11) Ipc09G0002500 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002510 AT3G28410.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc09G0002520 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002530 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002540 AT1G55500.1 evolutionarily conserved C-terminal region 4 0 evolutionarily conserved C-terminal region 4;(source:Araport11) Ipc09G0002550 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc09G0002560 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002570 AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc09G0002580 AT3G14600.1 Ribosomal protein L18ae/LX family protein 0 Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc09G0002590 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002600 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002610 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002620 AT3G03480.1 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase 0 acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase;(source:Araport11) Ipc09G0002630 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002640 AT5G17540.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0002650 AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5. Eukaryotic rpb5 RNA polymerase subunit family protein;(source:Araport11) Ipc09G0002660 AT1G31650.1 RHO guanyl-nucleotide exchange factor 14 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 14;(source:Araport11) Ipc09G0002670 AT3G43540.1 Protein of unknown function (DUF1350) 0 initiation factor 4F subunit (DUF1350);(source:Araport11) Ipc09G0002680 AT5G45300.3 0 Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays. beta-amylase 2;(source:Araport11) Ipc09G0002690 AT5G45290.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0002700 AT4G19400.1 Profilin family protein 0 Profilin family protein;(source:Araport11) Ipc09G0002710 AT1G31500.1 DNAse I-like superfamily protein HESP identified based on similarity to nocturnins and presence circadian regulatory elements in the promoter. It functions as a Mg(II) dependent poly(A) exoribonuclease.It is under circadian regulation and expressed at night. Knockdowns affect the regulation of circadian genes CCA1 and TOC1. DNAse I-like superfamily protein;(source:Araport11) Ipc09G0002720 AT1G73510.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0002730 AT1G31640.1 AGAMOUS-like 92 A paternally expressed imprinted gene. AGAMOUS-like 92;(source:Araport11) Ipc09G0002740 AT1G31440.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc09G0002750 AT1G31410.1 putrescine-binding periplasmic protein-related 0 putrescine-binding periplasmic protein-like protein;(source:Araport11) Ipc09G0002760 AT1G10170.4 0 Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response. NF-X-like 1;(source:Araport11) Ipc09G0002770 AT4G02380.1 senescence-associated gene 21 Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses. senescence-associated gene 21;(source:Araport11) Ipc09G0002780 AT2G44270.1 repressor of lrx1 Encodes ROL5, a repressor of lrx1 mutants that develop aberrant root hairs. ROL5 is a homolog of yeast Ncs6p that affects TOR signaling. The target of rapamycin (TOR) pathway is a major regulator of cell growth in eukaryotes, and inhibition of this pathway by rapamycin reduces cell growth. ROL5 might function as a mitochondrial component of the TOR pathway that influences the plant's response to ROS (reactive oxygen species). repressor of lrx1;(source:Araport11) Ipc09G0002790 AT1G76040.2 calcium-dependent protein kinase 29 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29;(source:Araport11) Ipc09G0002800 AT1G76010.2 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc09G0002810 AT4G38540.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc09G0002820 AT5G05320.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc09G0002830 AT1G20190.1 expansin 11 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin 11;(source:Araport11) Ipc09G0002840 AT1G75980.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc09G0002850 AT1G20180.1 Protein of unknown function (DUF677) 0 transmembrane protein (DUF677);(source:Araport11) Ipc09G0002860 AT4G35900.1 Basic-leucine zipper (bZIP) transcription factor family protein bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc09G0002870 AT5G42190.1 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis. E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein;(source:Araport11) Ipc09G0002880 AT4G35920.5 0 Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium. PLAC8 family protein;(source:Araport11) Ipc09G0002890 AT1G75900.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc09G0002900 AT5G42150.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc09G0002910 AT1G75820.1 Leucine-rich receptor-like protein kinase family protein Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc09G0002920 AT1G20060.7 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc09G0002930 AT4G24190.1 Chaperone protein htpG family protein encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. Chaperone protein htpG family protein;(source:Araport11) Ipc09G0002940 AT4G24180.1 THAUMATIN-LIKE PROTEIN 1 Root-specific expression activated in response to rhizobacteria and ACC. Role in induced systemic resistance. THAUMATIN-LIKE PROTEIN 1;(source:Araport11) Ipc09G0002950 AT1G75800.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc09G0002960 AT2G17880.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc09G0002970 AT2G22720.4 0 0 SPT2 chromatin protein;(source:Araport11) Ipc09G0002980 AT1G30755.6 0 0 elongation factor G, putative (DUF668);(source:Araport11) Ipc09G0002990 AT1G75780.1 tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain;(source:Araport11) Ipc09G0003000 #N/A #N/A #N/A #N/A Ipc09G0003010 AT1G19990.1 0 0 nucleolin;(source:Araport11) Ipc09G0003020 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0003030 AT1G75730.2 0 0 hypothetical protein;(source:Araport11) Ipc09G0003040 AT1G47840.1 hexokinase 3 Encodes a putative hexokinase. hexokinase 3;(source:Araport11) Ipc09G0003050 AT1G75720.2 Plant protein of unknown function (DUF827) 0 WEB family protein (DUF827);(source:Araport11) Ipc09G0003060 AT1G75717.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0003070 AT1G47870.2 winged-helix DNA-binding transcription factor family protein Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. AtE2Fc is regulated by a balance between gene expression and ubiquitin-proteasome proteolysis. AtE2Fc might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. E2Fc has been shown to interact with DPB in its nonphosphorylated form; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. E2Fc is required for miR396 activity on cell proliferation under UV-B. Its role is independent of E2Fe, probably modulating DNA damage responses through the regulation of SOG1 and ATR transcript levels. winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc09G0003080 AT1G75680.1 glycosyl hydrolase 9B7 0 glycosyl hydrolase 9B7;(source:Araport11) Ipc09G0003090 AT2G28305.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) Ipc09G0003100 AT1G75580.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc09G0003110 AT1G47900.2 Plant protein of unknown function (DUF869) 0 filament-like protein (DUF869);(source:Araport11) Ipc09G0003120 AT1G75590.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc09G0003130 AT1G75670.2 DNA-directed RNA polymerases 0 DNA-directed RNA polymerase;(source:Araport11) Ipc09G0003140 AT3G27230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0003150 AT1G19860.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc09G0003160 AT2G01180.6 0 Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves. phosphatidic acid phosphatase 1;(source:Araport11) Ipc09G0003170 AT1G19870.1 IQ-domain 32 Encodes a microtubule-associated protein. IQ-domain 32;(source:Araport11) Ipc09G0003180 AT1G19880.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc09G0003190 AT4G38900.3 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc09G0003200 AT5G42520.1 basic pentacysteine 6 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 6;(source:Araport11) Ipc09G0003210 AT1G30845.1 0 0 cell growth defect protein;(source:Araport11) Ipc09G0003220 AT5G10980.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc09G0003230 #N/A #N/A #N/A #N/A Ipc09G0003240 AT1G75620.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc09G0003250 AT1G34095.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0003260 AT1G75620.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc09G0003270 AT1G19910.1 ATPase, F0/V0 complex, subunit C protein vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc09G0003280 AT4G36180.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc09G0003290 AT4G24170.2 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc09G0003300 AT1G75540.1 salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile. salt tolerance homolog2;(source:Araport11) Ipc09G0003310 AT5G66330.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc09G0003320 AT3G54350.5 0 0 Forkhead-associated (FHA) domain-containing protein;(source:Araport11) Ipc09G0003330 AT3G54340.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc09G0003340 AT1G62280.1 SLAC1 homologue 1 Encodes a protein with ten predicted transmembrane helices. The SLAH1 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement a slac1-2 mutant suggesting that it performs a similar function. SLAH1:GFP localizes to the plasma membrane. SLAC1 homologue 1;(source:Araport11) Ipc09G0003350 AT1G62020.1 Coatomer, alpha subunit 0 Coatomer, alpha subunit;(source:Araport11) Ipc09G0003360 AT1G75520.1 SHI-related sequence 5 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.SRS5 is a positive regulator of photomorphogenesis. SHI-related sequence 5;(source:Araport11) Ipc09G0003370 AT1G75510.1 Transcription initiation factor IIF, beta subunit 0 Transcription initiation factor IIF, beta subunit;(source:Araport11) Ipc09G0003380 AT2G27190.1 purple acid phosphatase 12 Encodes a root-secreted purple acid phosphatase involved in extracellular phosphate-scavenging. purple acid phosphatase 12;(source:Araport11) Ipc09G0003390 AT1G58230.1 binding 0 binding protein;(source:Araport11) Ipc09G0003400 AT1G69730.1 Wall-associated kinase family protein 0 Wall-associated kinase family protein;(source:Araport11) Ipc09G0003410 AT2G27190.1 purple acid phosphatase 12 Encodes a root-secreted purple acid phosphatase involved in extracellular phosphate-scavenging. purple acid phosphatase 12;(source:Araport11) Ipc09G0003420 AT1G06060.1 LisH and RanBPM domains containing protein 0 LisH and RanBPM domains containing protein;(source:Araport11) Ipc09G0003430 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0003440 AT1G09850.1 xylem bark cysteine peptidase 3 Arabidopsis thaliana papain-like cysteine peptidase xylem bark cysteine peptidase 3;(source:Araport11) Ipc09G0003450 AT3G51030.1 thioredoxin H-type 1 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin H-type 1;(source:Araport11) Ipc09G0003460 AT1G19720.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc09G0003470 AT1G19715.3 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc09G0003480 AT1G75450.1 cytokinin oxidase 5 This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 5;(source:Araport11) Ipc09G0003490 AT1G45000.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc09G0003500 AT1G35180.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11) Ipc09G0003510 AT4G34680.2 GATA transcription factor 3 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 3;(source:Araport11) Ipc09G0003520 AT1G27620.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0003530 AT1G19660.2 Wound-responsive family protein 0 Wound-responsive family protein;(source:Araport11) Ipc09G0003540 AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0003550 AT1G75170.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc09G0003560 AT1G75180.3 Erythronate-4-phosphate dehydrogenase family protein 0 Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11) Ipc09G0003570 #N/A #N/A #N/A #N/A Ipc09G0003580 AT1G75200.1 flavodoxin family protein / radical SAM domain-containing protein 0 flavodoxin family protein / radical SAM domain-containing protein;(source:Araport11) Ipc09G0003590 AT1G19430.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0003600 AT1G47330.1 CBS domain-containing protein with a domain of unknown function (DUF21) 0 methyltransferase, putative (DUF21);(source:Araport11) Ipc09G0003610 AT1G75210.3 0 0 HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11) Ipc09G0003620 AT1G14440.2 homeobox protein 31 0 homeobox protein 31;(source:Araport11) Ipc09G0003630 AT5G45400.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc09G0003640 AT1G19600.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc09G0003650 AT5G42790.1 proteasome alpha subunit F1 encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance. proteasome alpha subunit F1;(source:Araport11) Ipc09G0003660 AT1G75310.1 auxin-like 1 protein 0 auxin-like 1 protein;(source:Araport11) Ipc09G0003670 AT1G27680.1 ADPGLC-PPase large subunit ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. The mRNA is cell-to-cell mobile. ADPGLC-PPase large subunit;(source:Araport11) Ipc09G0003680 AT3G46940.1 DUTP-PYROPHOSPHATASE-LIKE 1 0 DUTP-PYROPHOSPHATASE-LIKE 1;(source:Araport11) Ipc09G0003690 AT5G42950.1 GYF domain-containing protein EXA1 is a GYF domain-containing gene of the SMY2 subgroup. Mutants exhibit resistance to potexviruses. GYF domain-containing protein;(source:Araport11) Ipc09G0003700 AT1G45170.1 0 0 outer envelope pore 24B-like protein;(source:Araport11) Ipc09G0003710 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc09G0003720 AT2G16090.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0003730 AT2G16090.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0003740 AT2G16090.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0003750 AT3G61800.2 0 0 ENTH/VHS protein;(source:Araport11) Ipc09G0003760 AT1G80440.1 Galactose oxidase/kelch repeat superfamily protein Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB20, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. The mRNA is cell-to-cell mobile. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc09G0003770 AT1G75140.1 0 0 membrane protein;(source:Araport11) Ipc09G0003780 AT3G50700.1 indeterminate(ID)-domain 2 zinc finger protein, similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2;(source:Araport11) Ipc09G0003790 AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein 0 EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc09G0003800 AT1G75090.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc09G0003810 AT1G75080.2 Brassinosteroid signalling positive regulator (BZR1) family protein Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities. Brassinosteroid signaling positive regulator (BZR1) family protein;(source:Araport11) Ipc09G0003820 AT4G36800.2 RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1. RUB1 conjugating enzyme 1;(source:Araport11) Ipc09G0003830 AT4G36810.1 geranylgeranyl pyrophosphate synthase 1 Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. The mRNA is cell-to-cell mobile. geranylgeranyl pyrophosphate synthase 1;(source:Araport11) Ipc09G0003840 AT1G75030.1 thaumatin-like protein 3 encodes a PR5-like protein thaumatin-like protein 3;(source:Araport11) Ipc09G0003850 AT3G50760.1 galacturonosyltransferase-like 2 Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile. galacturonosyltransferase-like 2;(source:Araport11) Ipc09G0003860 AT2G23760.3 BEL1-like homeodomain 4 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw2 and saw1 may act redundantly to repress BP in leaves. BEL1-like homeodomain 4;(source:Araport11) Ipc09G0003870 AT1G47510.1 inositol polyphosphate 5-phosphatase 11 Encodes a phosphatidylinositol polyphosphate 5-phosphatase. It can dephosphorylate PI(4,5)P2, PI(3,5)P2, and PI(3,4,5)P3, but, it is not active against PI(5)P or the water soluble inositol(1,4,5)P3 or inositol(1,3,4,5)P4. The transcript levels for this gene rise in response to auxin, ABA, and JA. inositol polyphosphate 5-phosphatase 11;(source:Araport11) Ipc09G0003880 AT1G47530.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc09G0003890 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc09G0003900 AT2G23450.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc09G0003910 AT5G66985.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0003920 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0003930 AT3G13690.3 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc09G0003940 AT1G80260.1 Spc97 / Spc98 family of spindle pole body (SBP) component 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc09G0003950 AT5G42690.5 0 0 transcription factor, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc09G0003960 AT1G47490.1 RNA-binding protein 47C 0 RNA-binding protein 47C;(source:Araport11) Ipc09G0003970 AT2G26560.1 phospholipase A 2A Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus. phospholipase A 2A;(source:Araport11) Ipc09G0003980 AT5G23540.1 Mov34/MPN/PAD-1 family protein 0 Mov34/MPN/PAD-1 family protein;(source:Araport11) Ipc09G0003990 AT1G47420.1 succinate dehydrogenase 5 predicted to encode subunit 5 of mitochondrial complex II and to participate in the respiratory chain succinate dehydrogenase 5;(source:Araport11) Ipc09G0004000 AT4G10130.5 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc09G0004010 AT4G33380.1 0 0 dimethylallyl, adenosine tRNA methylthiotransferase;(source:Araport11) Ipc09G0004020 AT1G47380.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc09G0004030 AT5G42870.1 phosphatidic acid phosphohydrolase 2 The PAH2 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 μM Pi. phosphatidic acid phosphohydrolase 2;(source:Araport11) Ipc09G0004040 AT1G76650.3 calmodulin-like 38 0 calmodulin-like 38;(source:Araport11) Ipc09G0004050 AT4G33330.1 plant glycogenin-like starch initiation protein 3 Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition. plant glycogenin-like starch initiation protein 3;(source:Araport11) Ipc09G0004060 AT2G26570.2 0 Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity. WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827);(source:Araport11) Ipc09G0004070 AT4G33400.1 Vacuolar import/degradation, Vid27-related protein 0 Vacuolar import/degradation, Vid27-related protein;(source:Araport11) Ipc09G0004080 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc09G0004090 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc09G0004100 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc09G0004110 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc09G0004120 AT5G42890.1 sterol carrier protein 2 0 sterol carrier protein 2;(source:Araport11) Ipc09G0004130 AT1G07700.4 0 0 Thioredoxin superfamily protein;(source:Araport11) Ipc09G0004140 AT3G19270.2 0 Encodes a protein with ABA 8 Prime-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. cytochrome P450, family 707, subfamily A, polypeptide 4;(source:Araport11) Ipc09G0004150 AT5G42900.2 cold regulated gene 27 0 cold regulated protein 27;(source:Araport11) Ipc09G0004160 AT1G45230.1 Protein of unknown function (DUF3223) 0 DCL protein (DUF3223);(source:Araport11) Ipc09G0004170 AT1G45249.1 abscisic acid responsive elements-binding factor 2 Leucine zipper transcription factor that binds to the abscisic acid (ABA)–responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment. abscisic acid responsive elements-binding factor 2;(source:Araport11) Ipc09G0004180 AT1G45231.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes a trimethylguanosine synthase that is required for chilling tolerance. tgs1 mutant have a striking chilling sensitive phenotype in which leaf and flower development are dramatically disrupted after long-term chilling treatment. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0004190 AT4G14960.2 Tubulin/FtsZ family protein Encodes an alpha-tubulin isoform required for right handed helical growth. Tubulin/FtsZ family protein;(source:Araport11) Ipc09G0004200 AT1G45207.3 0 0 Remorin family protein;(source:Araport11) Ipc09G0004210 AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc09G0004220 AT5G67090.1 Subtilisin-like serine endopeptidase family protein Encodes a subtilisin-like serine protease with in vitro protease activity. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc09G0004230 AT2G27300.1 NTM1-like 8 NTL8 is a membrane-associated NAC transcription factor that binds both TRY and TCL1. Overexpression results in fewer trichomes. NTM1-like 8;(source:Araport11) Ipc09G0004240 AT1G49760.2 poly(A) binding protein 8 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. poly(A) binding protein 8;(source:Araport11) Ipc09G0004250 AT1G46480.1 WUSCHEL related homeobox 4 Encodes WOX4, a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. This protein also contains an acidic domain approximately 10 residues upstream of the WUS box. Part of the TDIF-TDR-WOX4 signaling pathway that plays a crucial role in the maintenance of the vascular meristem organization during secondary growth. WOX4 and WOX14 act downstream of the PXY receptor kinase to regulate plant vascular proliferation independently of any role in vascular organisation. WUSCHEL related homeobox 4;(source:Araport11) Ipc09G0004260 AT1G53910.2 related to AP2 12 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. It plays a key role in controlling root bending in response to hypoxia. related to AP2 12;(source:Araport11) Ipc09G0004270 AT5G52010.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc09G0004280 AT3G57870.1 sumo conjugation enzyme 1 Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name. sumo conjugation enzyme 1;(source:Araport11) Ipc09G0004290 AT5G47820.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0004300 AT5G47820.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0004310 AT5G47820.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc09G0004320 AT5G67200.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0004330 AT4G24240.1 WRKY DNA-binding protein 7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. WRKY DNA-binding protein 7;(source:Araport11) Ipc09G0004340 AT1G47128.1 Granulin repeat cysteine protease family protein cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc09G0004350 #N/A #N/A #N/A #N/A Ipc09G0004360 AT1G47056.1 VIER F-box proteine 1 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. VIER F-box protein 1;(source:Araport11) Ipc09G0004370 AT3G46630.1 Protein of unknown function (DUF3223) 0 DCL protein (DUF3223);(source:Araport11) Ipc09G0004380 AT3G50070.1 CYCLIN D3;3 Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. CYCLIN D3;(source:Araport11) Ipc09G0004390 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc02G0007840 AT3G25760.1 allene oxide cyclase 1 encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. The mRNA is cell-to-cell mobile. allene oxide cyclase 1;(source:Araport11) Ipc02G0007850 AT3G20010.2 0 Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG2 and interacts physically with SUVR2, another component of the RdDM pathway. SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0007860 AT1G50410.3 0 Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG1. SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0007870 AT1G50410.4 0 Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG1. SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0007880 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0007890 AT4G27810.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007900 AT1G37113.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007910 #N/A #N/A #N/A #N/A Ipc02G0007920 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc02G0007930 AT4G23980.1 auxin response factor 9 Encodes auxin response factor 9 (ARF9). The mRNA is cell-to-cell mobile. auxin response factor 9;(source:Araport11) Ipc02G0007940 AT5G36960.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007950 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017790 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007960 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0007970 AT1G01280.1 cytochrome P450, family 703, subfamily A, polypeptide 2 member of CYP703A CYP703A2 is expressed specifically in anthers of land plants, catalyzing the in-chain hydroxylation at the C-7 position of medium-chain saturated fatty acids (lauric acid in-chain hydroxylase) which is involved in pollen development (sporopollenin synthesis). cytochrome P450, family 703, subfamily A, polypeptide 2;(source:Araport11) Ipc02G0007980 AT5G53160.1 regulatory components of ABA receptor 3 Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile. regulatory components of ABA receptor 3;(source:Araport11) Ipc02G0007990 AT3G22910.1 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc02G0008000 AT3G24650.1 AP2/B3-like transcriptional factor family protein Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230). AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc02G0008010 AT3G61690.3 0 Putative TNAase nucleotidyltransferase;(source:Araport11) Ipc02G0008020 AT3G28380.1 P-glycoprotein 17 0 P-glycoprotein 17;(source:Araport11) Ipc02G0008030 #N/A #N/A #N/A #N/A Ipc02G0008040 AT1G10870.1 ARF-GAP domain 4 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3. ARF-GAP domain 4;(source:Araport11) Ipc02G0008050 AT5G43630.4 0 Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.The mRNA is cell-to-cell mobile. Gene ontology analysis of common promoter targets suggests an active role in the transcriptional regulation of gene expression in response to environmental, biotic, abiotic, and endogenous stimuli. Promoter regions show a huge over-representation in proteins involved in transcription, clock, flowering, and light signaling components, reflecting its involvement in regulating gene expression in response to environmental stimuli such as light and temperature. Coassociates with and regulates the expression of light-regulated loci as well as transcriptional regulators to shape plant development in response to environmental stimuli. Requires, at least in part, ZFHD10 for function with regard to blue-light-regulated hypocotyl elongation. zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0008060 AT1G09290.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0008070 AT2G04500.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc02G0008080 AT1G80910.1 Protein of unknown function (DUF1712) 0 vacuolar fusion CCZ1-like protein (DUF1712);(source:Araport11) Ipc02G0008090 AT3G55100.2 0 0 ABC-2 type transporter family protein;(source:Araport11) Ipc02G0008100 AT4G36150.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc02G0008110 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0008120 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0016250 AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5;(source:Araport11) Ipc13G0016240 AT3G55810.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc13G0016260 AT5G40850.1 urophorphyrin methylase 1 Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. The mRNA is cell-to-cell mobile. urophorphyrin methylase 1;(source:Araport11) Ipc13G0016270 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016280 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016290 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016300 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016310 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc13G0016370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016320 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc13G0016350 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016330 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc13G0016360 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016390 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016340 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc13G0016400 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016410 ATMG00270.1 NADH dehydrogenase 6 NADH dehydrogenase subunit 6 NADH dehydrogenase 6;(source:Araport11) Ipc13G0016420 AT2G07627.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0016430 AT5G25950.1 Protein of Unknown Function (DUF239) 0 AslB, putative (DUF239);(source:Araport11) Ipc13G0016440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016450 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016460 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc09G0011490 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc09G0011480 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0009690 AT4G11060.1 mitochondrially targeted single-stranded DNA binding protein Participates in a minimal functioning DNA replisome in plant chloroplasts and mitochondria which consists of the DNA primase-helicase protein Twinkle along with DNA polymerase 1A or 1B. mitochondrially targeted single-stranded DNA binding protein;(source:Araport11) Ipc08G0009700 AT4G11060.1 mitochondrially targeted single-stranded DNA binding protein Participates in a minimal functioning DNA replisome in plant chloroplasts and mitochondria which consists of the DNA primase-helicase protein Twinkle along with DNA polymerase 1A or 1B. mitochondrially targeted single-stranded DNA binding protein;(source:Araport11) Ipc08G0009680 AT5G27020.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009670 AT4G03740.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009660 AT2G25010.1 Aminotransferase-like, plant mobile domain family protein Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc08G0009650 AT4G31040.1 CemA-like proton extrusion protein-related 0 CemA-like proton extrusion protein-like protein;(source:Araport11) Ipc08G0009640 AT3G05640.3 0 EGR1 functions as a negative regulator of plant growth with prominent effect on plant growth during drought stress.EGR1 regulates microtubule organization and likely affects additional cytoskeleton and trafficking processes along the plasma membrane. Protein phosphatase 2C family protein;(source:Araport11) Ipc08G0009630 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0009620 AT3G16785.1 phospholipase D P1 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation. phospholipase D P1;(source:Araport11) Ipc08G0009610 AT2G34680.1 Outer arm dynein light chain 1 protein isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc08G0009600 AT1G09155.1 phloem protein 2-B15 0 phloem protein 2-B15;(source:Araport11) Ipc08G0009590 AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family SOC3 is a TIR-NB-leucine-rich repeat (TNL) protein.Mutants suppress loss of chs2 phenotype of auto-activation of immunity. When the TIR domain of SOC3 interacts with CHS2 the binding results in temperature activation of cell death, the suppressors inhibit this interaction. Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc08G0009580 AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily Encodes a pectin methylesterase that is sensitive to chilling stress and brassinosteroid regulation. Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc08G0009570 AT4G19050.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0009560 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc08G0009550 AT3G05600.1 alpha/beta-Hydrolases superfamily protein Encodes a cytosolic epoxide hydrolase capable of acting on 9,10-epoxystearic acid and on 12,13- epoxyoctadec-9-enoic acid that is involved in the synthesis of poly-hydroxylated cutin monomers. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0009540 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0009530 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0009520 AT3G05590.1 ribosomal protein L18 Encodes cytoplasmic ribosomal protein L18. ribosomal protein L18;(source:Araport11) Ipc08G0009510 AT3G05580.1 Calcineurin-like metallo-phosphoesterase superfamily protein Encodes a Type One Protein Phosphatase that acts as a nucleocytoplasmic negative regulator of tip growth. Mutants affect pollen germination, pollen tube growth, and root hair growth. It acts genetically downstream of ANX1 (AT3G04690) and ANX2 (AT5G28680). Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc08G0009500 AT3G05560.3 Ribosomal L22e protein family 0 Ribosomal L22e protein family;(source:Araport11) Ipc08G0009490 AT3G05545.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0009480 AT3G05530.1 regulatory particle triple-A ATPase 5A Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype. The mRNA is cell-to-cell mobile. regulatory particle triple-A ATPase 5A;(source:Araport11) Ipc08G0009470 AT5G02410.1 DIE2/ALG10 family Encodes ALG10, an ER-resident alpha1,2-glucosyltransferase that is required for lipid-linked oligosaccharide biosynthesis and subsequently for normal leaf development and abiotic stress response. DIE2/ALG10 family;(source:Araport11) Ipc08G0009460 AT3G05520.3 0 Encodes a capping protein that acts as a phosphatidic acid biosensor and key transducer of fluxes in membrane signaling phospholipids into changes in actin cytoskeleton dynamics. Subunits of heterodimeric actin filament capping protein Capz superfamily;(source:Araport11) Ipc08G0009450 AT5G06150.1 Cyclin family protein Encodes a cyclin whose expression is reduced in response to high salt. Cyclin family protein;(source:Araport11) Ipc08G0009440 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc08G0009430 AT1G72950.1 Disease resistance protein (TIR-NBS class) 0 Disease resistance protein (TIR-NBS class);(source:Araport11) Ipc08G0009420 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0009410 AT5G27700.1 Ribosomal protein S21e Cytosolic ribosomal protein. Similar to EVR1 and redundant with EVR1. Also enhances VAR2 mutant varigation, but to a lesser extent than evr1. Ribosomal protein S21e;(source:Araport11) Ipc08G0009400 AT5G27700.1 Ribosomal protein S21e Cytosolic ribosomal protein. Similar to EVR1 and redundant with EVR1. Also enhances VAR2 mutant varigation, but to a lesser extent than evr1. Ribosomal protein S21e;(source:Araport11) Ipc08G0009390 AT3G05470.1 Actin-binding FH2 (formin homology 2) family protein 0 Actin-binding FH2 (formin homology 2) family protein;(source:Araport11) Ipc08G0009380 AT5G27680.4 0 0 RECQ helicase SIM;(source:Araport11) Ipc08G0009370 AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0009360 AT3G62770.1 Transducin/WD40 repeat-like superfamily protein Required for autophagosome formation during nutrient deprivation and senescence, promotes pexophagy during seedling development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0009350 AT4G32915.1 0 0 glutamyl-tRNA(Gln) amidotransferase subunit C;(source:Araport11) Ipc08G0009340 AT1G09070.1 soybean gene regulated by cold-2 SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting. The mRNA is cell-to-cell mobile. soybean gene regulated by cold-2;(source:Araport11) Ipc08G0009330 AT3G05420.2 acyl-CoA binding protein 4 Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. acyl-CoA binding protein 4;(source:Araport11) Ipc08G0009320 AT1G09070.1 soybean gene regulated by cold-2 SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting. The mRNA is cell-to-cell mobile. soybean gene regulated by cold-2;(source:Araport11) Ipc08G0009310 AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc08G0009300 AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0009290 AT2G42640.1 Mitogen activated protein kinase kinase kinase-related 0 Mitogen activated protein kinase kinase kinase-like protein;(source:Araport11) Ipc08G0009280 AT5G28690.3 0 0 carboxylate clamp-TPR protein (DUF1685);(source:Araport11) Ipc08G0009270 AT3G48380.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 0 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2;(source:Araport11) Ipc08G0009260 AT3G05410.2 Photosystem II reaction center PsbP family protein 0 Photosystem II reaction center PsbP family protein;(source:Araport11) Ipc08G0009250 AT4G15970.1 Nucleotide-diphospho-sugar transferase family protein 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc08G0009240 AT2G47810.1 nuclear factor Y, subunit B5 0 nuclear factor Y, subunit B5;(source:Araport11) Ipc08G0009230 AT2G47810.1 nuclear factor Y, subunit B5 0 nuclear factor Y, subunit B5;(source:Araport11) Ipc08G0009220 AT1G54920.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0009210 AT1G54940.1 plant glycogenin-like starch initiation protein 4 Encodes a xylan glucuronosyltransferase. plant glycogenin-like starch initiation protein 4;(source:Araport11) Ipc08G0009200 AT1G54920.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0009190 AT4G34215.2 Domain of unknown function (DUF303) Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds. carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc08G0009180 AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1 Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. ADP glucose pyrophosphorylase large subunit 1;(source:Araport11) Ipc08G0009170 AT5G41020.1 myb family transcription factor 0 myb family transcription factor;(source:Araport11) Ipc08G0009160 AT4G17020.1 transcription factor-related 0 transcription factor-like protein;(source:Araport11) Ipc08G0009150 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0009140 AT5G35732.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009130 AT4G02570.4 cullin 1 Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response. cullin 1;(source:Araport11) Ipc08G0009120 AT1G55040.1 zinc finger (Ran-binding) family protein SED1 is a protein of unknown function that is located in the mitochondrion. sed1 mutants are embryo lethal. zinc finger (Ran-binding) family protein;(source:Araport11) Ipc08G0009110 AT1G67500.5 0 Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). recovery protein 3;(source:Araport11) Ipc08G0009100 AT3G05150.3 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0009090 AT4G02670.2 0 0 indeterminate(ID)-domain 12;(source:Araport11) Ipc08G0009080 AT5G62990.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc08G0009070 AT2G16190.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009060 AT1G54730.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0009050 AT1G56555.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0009040 AT1G77210.2 sugar transporter 14 AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose. sugar transporter 14;(source:Araport11) Ipc08G0009030 AT2G43290.1 Calcium-binding EF-hand family protein Calmodulin-like MSS3.Encodes an endomembrane localized member of the CML subfamily VII. Contains a canonical CaM domain and unique N-terminal extension that distinguishes it from other members of the subfamily. Calcium-binding EF-hand family protein;(source:Araport11) Ipc08G0009020 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0009010 AT5G57140.1 purple acid phosphatase 28 0 purple acid phosphatase 28;(source:Araport11) Ipc08G0009000 AT1G20540.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0008990 AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0008970 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0008980 AT2G41080.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 pentatricopeptide (PPR) repeat protein;(source:Araport11) Ipc08G0008960 AT1G36510.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc08G0008950 AT1G77610.1 EamA-like transporter family protein 0 EamA-like transporter family protein;(source:Araport11) Ipc08G0008940 AT2G27900.2 0 0 coiled-coil protein;(source:Araport11) Ipc08G0008930 AT3G59500.2 0 0 Integral membrane HRF1 family protein;(source:Araport11) Ipc08G0008920 AT3G59510.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc08G0008910 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc08G0008900 AT3G05200.1 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc08G0008890 AT3G59410.3 0 Encodes an eIF2alpha kinase that can bind uncharged tRNA via its C-terminus and can phosphorylate both eIF2alpha homologues in Arabidopsis. protein kinase family protein;(source:Araport11) Ipc08G0008880 AT1G09730.2 Cysteine proteinases superfamily protein Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0008870 AT2G31500.1 calcium-dependent protein kinase 24 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 24;(source:Araport11) Ipc08G0008830 AT1G05850.2 0 Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. Chitinase family protein;(source:Araport11) Ipc08G0008850 AT5G16740.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc08G0008840 AT1G05850.2 0 Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. Chitinase family protein;(source:Araport11) Ipc08G0008860 AT5G16740.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc03G0006060 AT2G46420.3 0 0 helicase with zinc finger protein;(source:Araport11) Ipc03G0006070 AT4G30110.2 0 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc heavy metal atpase 2;(source:Araport11) Ipc03G0006080 AT4G30110.2 0 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc heavy metal atpase 2;(source:Araport11) Ipc03G0006090 AT2G34400.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc03G0006100 AT4G30130.3 0 0 DUF630 family protein (DUF630 and DUF632);(source:Araport11) Ipc03G0006110 AT3G08870.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc03G0006120 AT3G55930.1 Pre-mRNA-splicing factor 3 0 pre-mRNA-splicing factor;(source:Araport11) Ipc03G0006130 AT5G12000.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0006140 AT5G44420.1 plant defensin 1.2 Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of PDF. plant defensin 1.2;(source:Araport11) Ipc03G0006150 AT1G19610.1 Arabidopsis defensin-like protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. defensin-like protein;(source:Araport11) Ipc03G0006160 AT5G57290.1 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc03G0006170 AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1 Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. phosphorylethanolamine cytidylyltransferase 1;(source:Araport11) Ipc03G0006180 AT5G35320.1 0 0 DBH-like monooxygenase;(source:Araport11) Ipc03G0006190 AT2G39930.1 isoamylase 1 Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex. isoamylase 1;(source:Araport11) Ipc03G0006200 AT4G10310.1 high-affinity K+ transporter 1 encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots. high-affinity K+ transporter 1;(source:Araport11) Ipc03G0006210 #N/A #N/A #N/A #N/A Ipc03G0006220 AT1G79940.3 DnaJ / Sec63 Brl domains-containing protein J domain protein localized in ER membrane. Mutants have defective pollen germination. DnaJ / Sec63 Brl domains-containing protein;(source:Araport11) Ipc03G0006230 AT2G24400.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc03G0006240 AT2G18390.1 ADP-ribosylation factor family protein Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development. ADP-ribosylation factor family protein;(source:Araport11) Ipc03G0006250 AT4G10310.1 high-affinity K+ transporter 1 encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots. high-affinity K+ transporter 1;(source:Araport11) Ipc03G0006260 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0006270 AT2G06925.1 Phospholipase A2 family protein Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine. Phospholipase A2 family protein;(source:Araport11) Ipc03G0006280 AT2G19070.1 spermidine hydroxycinnamoyl transferase encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) spermidine hydroxycinnamoyl transferase;(source:Araport11) Ipc03G0006290 AT2G31490.1 0 0 neuronal acetylcholine receptor subunit alpha-5;(source:Araport11) Ipc03G0006300 AT4G10450.2 0 0 Ribosomal protein L6 family;(source:Araport11) Ipc03G0006310 AT5G41685.1 Mitochondrial outer membrane translocase complex, subunit Tom7 0 Mitochondrial outer membrane translocase complex, subunit Tom7;(source:Araport11) Ipc03G0006320 AT5G35330.4 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 02;(source:Araport11) Ipc03G0006330 AT4G16130.1 arabinose kinase Similar to galactokinase. arabinose kinase;(source:Araport11) Ipc03G0006340 AT2G06990.1 RNA helicase, ATP-dependent, SK12/DOB1 protein Encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl. RNA helicase, ATP-dependent, SK12/DOB1 protein;(source:Araport11) Ipc03G0006350 AT5G20700.1 Protein of unknown function (DUF581) 0 senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc03G0006360 AT5G35380.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc03G0006370 AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli. Xyloglucan endotransglucosylase/hydrolase family protein;(source:Araport11) Ipc03G0006380 AT4G31250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc03G0006390 AT5G35400.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc03G0006400 AT2G07050.1 cycloartenol synthase 1 Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol. cycloartenol synthase 1;(source:Araport11) Ipc03G0006410 AT2G07340.1 PREFOLDIN 1 0 PREFOLDIN 1;(source:Araport11) Ipc03G0006420 AT3G52680.2 F-box/RNI-like/FBD-like domains-containing protein 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc03G0006430 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc03G0006440 AT5G55940.1 Uncharacterised protein family (UPF0172) 0 Uncharacterized protein family (UPF0172);(source:Araport11) Ipc03G0006450 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc03G0006460 AT4G30960.1 SOS3-interacting protein 3 Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile. SOS3-interacting protein 3;(source:Araport11) Ipc03G0006470 #N/A #N/A #N/A #N/A Ipc03G0006480 AT2G01379.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0006490 #N/A #N/A #N/A #N/A Ipc03G0006500 AT2G22440.1 0 0 non-LTR retroelement reverse transcriptase;(source:Araport11) Ipc03G0006510 AT3G62800.3 double-stranded-RNA-binding protein 4 Encodes a nuclear dsRNA-binding protein DRB4 that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. Also has an impact on polymerase IV-dependent siRNA levels. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression. double-stranded-RNA-binding protein 4;(source:Araport11) Ipc03G0006520 AT5G49660.1 Leucine-rich repeat transmembrane protein kinase family protein The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc03G0006530 AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein 0 Cytochrome c oxidase, subunit Vib family protein;(source:Araport11) Ipc03G0006540 AT2G24260.2 0 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair and sperm cell development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3). LJRHL1-like 1;(source:Araport11) Ipc03G0006550 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc03G0006560 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0006570 AT4G30993.2 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc03G0006580 AT4G16800.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 3-methylglutaconyl-CoA hydratase localized to mitochondria. Knockout displays accelerated senescence when subjected to extended dark conditions;knockout senescing leaves and knockout seeds accumulate leu, ile, and val. ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc03G0006590 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0006600 AT3G14310.1 pectin methylesterase 3 encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism. pectin methylesterase 3;(source:Araport11) Ipc03G0006610 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0006620 AT4G10230.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc03G0006630 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0006640 AT5G58170.1 SHV3-like 5 Encodes a member of the glycerophosphodiester phosphodiesterase like (GDPD-like) family. SHV3-like 5;(source:Araport11) Ipc03G0006650 AT5G58070.1 temperature-induced lipocalin Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane. temperature-induced lipocalin;(source:Araport11) Ipc03G0006660 AT5G58060.1 SNARE-like superfamily protein member of YKT6 Gene Family SNARE-like superfamily protein;(source:Araport11) Ipc03G0006670 AT2G24280.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0006680 AT2G24290.1 Protein of unknown function (DUF1068) 0 ubiquitin-associated protein (DUF1068);(source:Araport11) Ipc03G0006690 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0006700 AT2G25180.1 response regulator 12 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 12;(source:Araport11) Ipc03G0006710 AT4G31020.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc03G0006720 AT5G58200.2 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc03G0006730 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0006740 AT5G48620.6 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0006750 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc03G0006760 AT4G19810.2 0 ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.The mRNA is cell-to-cell mobile. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc03G0006770 AT4G19810.2 0 ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.The mRNA is cell-to-cell mobile. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc03G0006780 AT4G19800.1 Glycosyl hydrolase family protein with chitinase insertion domain 0 Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc03G0006790 AT1G15860.2 Domain of unknown function (DUF298) 0 defective in cullin neddylation protein (DUF298);(source:Araport11) Ipc03G0006800 AT4G13320.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0006810 AT2G31910.3 0 member of Putative Na+/H+ antiporter family cation/H+ exchanger 21;(source:Araport11) Ipc03G0006820 AT1G80710.1 DROUGHT SENSITIVE 1 Encodes a WD­40 repeat family protein containing a DWD (DDB1 binding WD­40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1­ Cul4–mediated protein degradation in drought response. DROUGHT SENSITIVE 1;(source:Araport11) Ipc03G0006830 AT3G42640.1 H(+)-ATPase 8 0 H[+]-ATPase 8;(source:Araport11) Ipc03G0006840 AT5G12370.2 exocyst complex component sec10 0 exocyst complex component sec10;(source:Araport11) Ipc03G0006850 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc03G0006860 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0006870 AT5G35180.2 Protein of unknown function (DUF1336) 0 ENHANCED DISEASE RESISTANCE protein (DUF1336);(source:Araport11) Ipc03G0006880 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc03G0006890 AT5G42190.1 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis. E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein;(source:Araport11) Ipc03G0006900 AT4G02040.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0006910 AT4G02050.2 0 STP7 is a monosaccharide/H+ symporter that transports arabinose and xylose. sugar transporter protein 7;(source:Araport11) Ipc03G0006920 AT3G54540.2 0 member of GCN subfamily general control non-repressible 4;(source:Araport11) Ipc03G0006930 AT5G35170.1 adenylate kinase family protein 0 adenylate kinase family protein;(source:Araport11) Ipc03G0006940 AT5G35160.4 0 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc03G0006950 AT4G34490.1 cyclase associated protein 1 CYCLASE ASSOCIATED PROTEIN cyclase associated protein 1;(source:Araport11) Ipc03G0006960 AT2G16730.1 glycosyl hydrolase family 35 protein putative beta-galactosidase (BGAL13 gene) glycosyl hydrolase family 35 protein;(source:Araport11) Ipc03G0006970 AT2G16730.1 glycosyl hydrolase family 35 protein putative beta-galactosidase (BGAL13 gene) glycosyl hydrolase family 35 protein;(source:Araport11) Ipc03G0006980 AT1G59124.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0006990 AT5G62865.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0007000 AT5G25220.1 KNOTTED1-like homeobox gene 3 A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia homeobox protein knotted-1-like 3;(source:Araport11) Ipc03G0007010 AT5G60040.1 nuclear RNA polymerase C1 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1;(source:Araport11) Ipc03G0007020 AT5G48030.1 gametophytic factor 2 encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. gametophytic factor 2;(source:Araport11) Ipc03G0007030 AT3G11840.1 plant U-box 24 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. E3 ubiquitin-protein ligase PUB24-like protein;(source:Araport11) Ipc03G0007040 AT5G35090.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0007050 AT2G15580.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0007060 AT1G05290.1 CCT motif family protein Member of the CONSTANS-Like protein family which is a putative regulator of reactive oxygen species homeostasis. CCT motif family protein;(source:Araport11) Ipc03G0007070 AT5G45290.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0007080 AT2G13100.4 0 Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).The mRNA is cell-to-cell mobile. Major facilitator superfamily protein;(source:Araport11) Ipc03G0007090 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc03G0007100 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc03G0007110 AT2G25620.2 0 Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses. DNA-binding protein phosphatase 1;(source:Araport11) Ipc03G0007120 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc03G0007130 AT1G71140.1 MATE efflux family protein MATE transporter that can export the antibiotic norfloxacin. MATE efflux family protein;(source:Araport11) Ipc03G0007140 AT5G66816.1 0 0 DNA-directed RNA polymerase II subunit RPB1-like protein;(source:Araport11) Ipc08G0004220 AT1G30700.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004210 AT1G64253.1 0 0 DEK carboxy-terminal domain protein;(source:Araport11) Ipc08G0004200 AT1G30700.1 FAD-binding Berberine family protein 0 FAD-binding Berberine family protein;(source:Araport11) Ipc08G0004190 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0004180 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0004170 AT2G10260.2 0 0 Ulp1 protease family protein;(source:Araport11) Ipc08G0004160 AT5G28950.1 0 0 nuclease;(source:Araport11) Ipc08G0004150 AT1G30360.1 Early-responsive to dehydration stress protein (ERD4) 0 Early-responsive to dehydration stress protein (ERD4);(source:Araport11) Ipc08G0004140 AT4G21060.2 Galactosyltransferase family protein Encodes an endomembrane system-localized, hydroxyproline-O-galactosyltransferase specific for arabinogalactan-protein biosynthesis. Galactosyltransferase family protein;(source:Araport11) Ipc08G0004130 AT1G30330.1 auxin response factor 6 Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. auxin response factor 6;(source:Araport11) Ipc08G0004120 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0004110 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc08G0004100 #N/A #N/A #N/A #N/A Ipc08G0004090 AT1G30280.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc08G0004080 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0004070 #N/A #N/A #N/A #N/A Ipc08G0004060 AT1G30270.1 CBL-interacting protein kinase 23 Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 23;(source:Araport11) Ipc06G0018120 AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein 0 C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11) Ipc06G0016900 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc06G0016920 AT3G02170.3 0 Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function. longifolia2;(source:Araport11) Ipc06G0016940 AT5G13500.3 0 0 Hyp O-arabinosyltransferase-like protein;(source:Araport11) Ipc06G0016960 AT2G03120.1 signal peptide peptidase homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant. The mRNA is cell-to-cell mobile. signal peptide peptidase;(source:Araport11) Ipc06G0016970 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0016980 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0016990 AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017000 AT4G03250.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc06G0017010 AT3G18620.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc06G0017020 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc06G0017050 AT2G13770.1 0 0 nuclease;(source:Araport11) Ipc06G0017060 AT4G18380.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc06G0017070 AT2G13370.3 0 0 chromatin remodeling 5;(source:Araport11) Ipc06G0017090 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc06G0017100 AT1G64370.1 0 0 filaggrin-like protein;(source:Araport11) Ipc06G0017120 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc08G0005860 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005970 AT1G31260.1 zinc transporter 10 precursor member of Fe(II) transporter isolog family zinc transporter 10 precursor;(source:Araport11) Ipc14G0005400 AT4G02600.2 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc14G0005410 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0005420 AT2G37520.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc14G0005430 AT2G37510.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc14G0005440 AT5G62380.2 0 Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. NAC-domain protein 101;(source:Araport11) Ipc14G0018410 AT2G39480.2 0 0 P-glycoprotein 6;(source:Araport11) Ipc14G0018400 AT2G43080.1 P4H isoform 1 Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides. P4H isoform 1;(source:Araport11) Ipc14G0018390 AT3G16090.1 RING/U-box superfamily protein Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation). RING/U-box superfamily protein;(source:Araport11) Ipc06G0018000 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0017990 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0017980 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0017970 AT4G35110.6 0 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc06G0017960 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc06G0017950 AT2G17905.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc06G0017940 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc06G0017920 AT3G11590.1 0 0 golgin family A protein;(source:Araport11) Ipc06G0017910 AT5G22300.1 nitrilase 4 encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. The mRNA is cell-to-cell mobile. nitrilase 4;(source:Araport11) Ipc06G0017900 AT5G59380.1 methyl-CPG-binding domain 6 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. The mRNA is cell-to-cell mobile. methyl-CPG-binding domain 6;(source:Araport11) Ipc06G0017880 AT3G44290.1 NAC domain containing protein 60 0 NAC domain containing protein 60;(source:Araport11) Ipc06G0017870 AT2G36980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017160 AT5G27260.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0017860 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0017190 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0017210 AT1G34120.5 0 Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2. inositol polyphosphate 5-phosphatase I;(source:Araport11) Ipc06G0017220 AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc06G0017230 AT5G22280.1 0 0 peptidyl-prolyl cis-trans isomerase G;(source:Araport11) Ipc06G0017250 AT2G36060.1 MMS ZWEI homologue 3 MMZ3/UEV1C encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1C can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ3/UEV1C transcripts are found at moderate levels in most plant organs, but cannot be detected in the pollen or 2 days after germination. Transcript levels do not appear to be stress-inducible. MMS ZWEI homologue 3;(source:Araport11) Ipc06G0017850 AT1G10400.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0017840 AT2G21240.2 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4;(source:Araport11) Ipc10G0019620 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0019630 AT1G12460.2 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0019640 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0019650 AT2G39780.1 ribonuclease 2 Encodes the main endoribonuclease activity in plant cells and localizes to the endoplasmic reticulum (ER), ER-derived structures, and vacuoles. It is essential for normal ribosomal RNA recycling. The mRNA is cell-to-cell mobile. ribonuclease 2;(source:Araport11) Ipc10G0019660 AT1G77620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0019670 AT4G12790.6 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0019680 AT3G07560.1 peroxin 13 Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase. peroxin 13;(source:Araport11) Ipc10G0019690 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc10G0019700 AT3G07565.1 Protein of unknown function (DUF3755) 0 histone H2A deubiquitinase (DUF3755);(source:Araport11) Ipc10G0019710 AT1G67520.4 0 0 lectin protein kinase family protein;(source:Araport11) Ipc10G0019720 AT1G04020.2 breast cancer associated RING 1 Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein-protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. breast cancer associated RING 1;(source:Araport11) Ipc10G0019730 AT2G40930.2 0 Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. ubiquitin-specific protease 5;(source:Araport11) Ipc10G0019740 AT4G12780.1 Chaperone DnaJ-domain superfamily protein Negative regulation of growth and endocytosis, most likely as a result of inhibition of the recruitment of clathrin to endocytic pits. Overexpression inhbits recruitment of clathrin resulting in negative regulation of endocytosis and developmental arrest. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc10G0019750 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0019760 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc10G0019770 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0019780 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc10G0019800 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc08G0001780 AT1G19020.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc08G0001790 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001800 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001810 AT2G34080.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001820 AT2G27420.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001830 AT2G34080.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001840 AT4G18375.3 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc08G0001850 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001860 AT1G06260.1 Cysteine proteinases superfamily protein Cysteine peptidase,activity detected in leaf and flower. Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001870 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001880 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0001890 AT1G28580.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0001900 AT1G28600.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0001910 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001920 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001930 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001940 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001950 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0001960 AT2G34090.1 maternal effect embryo arrest 18 0 maternal effect embryo arrest 18;(source:Araport11) Ipc08G0001970 AT2G27430.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc08G0001980 AT1G29100.2 0 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc08G0001990 AT1G29120.2 Hydrolase-like protein family 0 Hydrolase-like protein family;(source:Araport11) Ipc08G0002000 AT2G34140.1 Dof-type zinc finger DNA-binding family protein CDF4 is member of the group II DOF transcription factor family is involved in regulation of differentiation root columella cells. It is a direct target of the transcriptional repressor WOX5. CDF4 itself is a transcriptional repressor that appears to repress root columella stem cell identity. Ectopic expression of CDF leads to premature differentiation of root columella cells. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc08G0001770 AT1G05170.2 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc08G0001760 AT1G05200.6 0 Encodes a putative glutamate receptor GLR3 with dual localization in plastid and plasma membrane. glutamate receptor 3.4;(source:Araport11) Ipc08G0001750 AT1G05205.1 0 0 hexokinase-1 protein;(source:Araport11) Ipc08G0001740 AT1G05230.3 homeodomain GLABROUS 2 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number. homeodomain GLABROUS 2;(source:Araport11) Ipc08G0001730 AT3G63460.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0001720 #N/A #N/A #N/A #N/A Ipc08G0001710 AT4G19710.2 aspartate kinase-homoserine dehydrogenase ii Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase ii;(source:Araport11) Ipc08G0001700 AT3G21710.2 0 0 transmembrane protein;(source:Araport11) Ipc08G0001690 AT3G01190.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc08G0001680 AT1G05260.1 Peroxidase superfamily protein Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc08G0001670 AT1G05270.1 TraB family protein 0 TraB family protein;(source:Araport11) Ipc08G0001660 AT3G21810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc08G0001650 AT3G02450.1 cell division protein ftsH, putative Proteolytically inactive member of the FtsH (filamentation-temperature-sensitive protein H) protease family due to mutations in the protease domain. cell division protein ftsH;(source:Araport11) Ipc08G0001640 AT3G21865.1 peroxin 22 Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes. peroxin 22;(source:Araport11) Ipc08G0001630 AT3G22060.1 Receptor-like protein kinase-related family protein contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain Receptor-like protein kinase-related family protein;(source:Araport11) Ipc08G0001620 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc08G0001610 AT4G14740.4 0 FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc08G0001600 AT5G07010.1 sulfotransferase 2A Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). sulfotransferase 2A;(source:Araport11) Ipc08G0001590 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0001580 AT3G22060.1 Receptor-like protein kinase-related family protein contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain Receptor-like protein kinase-related family protein;(source:Araport11) Ipc08G0001570 AT3G22060.1 Receptor-like protein kinase-related family protein contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain Receptor-like protein kinase-related family protein;(source:Araport11) Ipc08G0001560 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc08G0001550 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc08G0001540 AT3G22060.1 Receptor-like protein kinase-related family protein contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain Receptor-like protein kinase-related family protein;(source:Araport11) Ipc08G0001530 AT4G16260.1 Glycosyl hydrolase superfamily protein Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc08G0001520 AT3G22060.1 Receptor-like protein kinase-related family protein contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain Receptor-like protein kinase-related family protein;(source:Araport11) Ipc08G0001510 #N/A #N/A #N/A #N/A Ipc08G0001470 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc08G0001500 AT5G67280.1 receptor-like kinase 0 receptor-like kinase;(source:Araport11) Ipc08G0001490 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc08G0001480 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc08G0001460 AT1G18590.1 sulfotransferase 17 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. sulfotransferase 17;(source:Araport11) Ipc08G0001450 AT3G14920.1 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein 0 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein;(source:Araport11) Ipc08G0001440 AT1G78800.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc08G0001430 AT5G54650.2 formin homology5 Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene. formin homology5;(source:Araport11) Ipc08G0001420 AT2G32280.2 0 Encodes a member of a plant-specific gene family that is required for embryo provasculature development. The gene product regulates vascular network complexity and connectivity in cotyledons. GPI inositol-deacylase C, putative (DUF1218);(source:Araport11) Ipc08G0001410 AT5G16950.1 0 0 krueppel-like factor;(source:Araport11) Ipc08G0001400 AT3G22100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0001390 AT4G15180.1 SET domain protein 2 Encodes SET domain containing protein that acts redundantly with ATX4/5 to regulate histone H3-K4 methylation. SET domain protein 2;(source:Araport11) Ipc08G0001380 AT3G49950.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc08G0001370 AT3G22104.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0001360 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc08G0001350 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0001340 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0001330 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0001320 AT5G54490.1 pinoid-binding protein 1 Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels. pinoid-binding protein 1;(source:Araport11) Ipc08G0001310 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0001300 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0001290 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0001280 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0001270 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0001260 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc08G0001250 AT4G03260.4 0 MASP1 overexpression promotes growth during drought and promotes microtubule stability and recovery after stress as well as microtubule bundling.MASP1 growth promotion and microtubule stabilization activities are dependent upon serine 670 phosphorylation. MASP1 binds microtubules;this activity is not affected by MASP1 phosphorylation status.MASP1 protein levels are induced by drought post-transcriptionally. Outer arm dynein light chain 1 protein;(source:Araport11) Ipc08G0001240 AT1G11360.4 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc08G0001230 AT2G42990.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0001220 AT1G10385.1 Vps51/Vps67 family (components of vesicular transport) protein 0 Vps51/Vps67 family (components of vesicular transport) protein;(source:Araport11) Ipc08G0001210 AT1G27410.1 DNA repair metallo-beta-lactamase family protein 0 DNA repair metallo-beta-lactamase family protein;(source:Araport11) Ipc08G0001200 AT2G19130.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0001190 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc08G0001180 AT3G23250.1 myb domain protein 15 Member of the R2R3 factor gene family. myb domain protein 15;(source:Araport11) Ipc08G0001170 AT4G03280.1 photosynthetic electron transfer C Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen. The mRNA is cell-to-cell mobile. photosynthetic electron transfer C;(source:Araport11) Ipc08G0001160 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc08G0001150 AT4G28100.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0001140 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0001130 AT1G76405.2 0 0 outer envelope pore 21B-like protein;(source:Araport11) Ipc08G0001120 AT2G33640.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc08G0001110 AT1G69550.1 disease resistance protein (TIR-NBS-LRR class) 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc08G0001100 AT1G42960.1 0 expressed protein localized to the inner membrane of the chloroplast. inner membrane localized protein;(source:Araport11) Ipc08G0001090 AT1G42970.1 glyceraldehyde-3-phosphate dehydrogenase B subunit Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers. The mRNA is cell-to-cell mobile. glyceraldehyde-3-phosphate dehydrogenase B subunit;(source:Araport11) Ipc08G0001080 AT1G42540.4 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 3.3;(source:Araport11) Ipc08G0001070 AT2G33700.1 Protein phosphatase 2C family protein Encodes a putative protein phosphatase 2C that positively regulates salt tolerance in abscisic acid-dependent manner. Protein phosphatase 2C family protein;(source:Araport11) Ipc08G0001060 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0001050 #N/A #N/A #N/A #N/A Ipc08G0001040 AT3G14470.2 0 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc08G0001030 AT1G76320.3 0 0 FAR1-related sequence 4;(source:Araport11) Ipc08G0001020 #N/A #N/A #N/A #N/A Ipc08G0001010 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc08G0001000 AT1G15890.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc08G0000990 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc08G0000980 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc08G0000970 AT5G42350.1 Galactose oxidase/kelch repeat superfamily protein Encodes CFK1 (COP9 INTERACTING F-BOX KELCH 1), a CSN (COP9 signalosome)-interacting F-box protein. CFK1 is a component of a functional ubiquitin ligase complex. CFK1 promotes hypocotyl elongation by increasing cell size. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc08G0000960 AT4G31210.1 DNA topoisomerase, type IA, core 0 DNA topoisomerase, type IA, core;(source:Araport11) Ipc08G0000950 AT5G42350.1 Galactose oxidase/kelch repeat superfamily protein Encodes CFK1 (COP9 INTERACTING F-BOX KELCH 1), a CSN (COP9 signalosome)-interacting F-box protein. CFK1 is a component of a functional ubiquitin ligase complex. CFK1 promotes hypocotyl elongation by increasing cell size. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc08G0000940 AT1G76390.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc08G0000930 AT1G20693.2 high mobility group B2 Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile. high mobility group B2;(source:Araport11) Ipc08G0000920 AT1G20670.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc08G0000910 AT4G37420.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc08G0000900 AT1G20650.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0000890 AT4G35090.1 catalase 2 Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2). catalase 2;(source:Araport11) Ipc08G0000880 AT5G42340.1 Plant U-Box 15 0 Plant U-Box 15;(source:Araport11) Ipc08G0000870 AT1G20610.1 Cyclin B2;3 0 Cyclin B2;(source:Araport11) Ipc08G0000860 AT4G35230.1 BR-signaling kinase 1 Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. BR-signaling kinase 1;(source:Araport11) Ipc08G0000850 AT1G76250.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0000840 AT1G76250.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0000830 AT4G22820.2 A20/AN1-like zinc finger family protein A member of the A20/AN1 zinc finger protein family involved in stress response.Expression is increased in response to water, salt , pathogen and other stressors.SAP9 can pull down both K48-linked and K63- linked tetraubiquitin chains and functions as a E3 ubiquitin ligase suggesting a role in proteasome-dependent protein degradation. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc08G0000820 AT1G76250.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0024090 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0024100 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc05G0024110 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0024120 AT1G62960.1 ACC synthase 10 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. ACC synthase 10;(source:Araport11) Ipc05G0024130 AT4G11610.2 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc05G0024140 AT3G26000.1 Ribonuclease inhibitor RIPF1 is an F-Box E3 ligase that interacts with the ABA receptor RCAR3 and appears to be responsible for facilitating its turnover. Ribonuclease inhibitor;(source:Araport11) Ipc05G0024150 AT3G09360.3 0 0 Cyclin/Brf1-like TBP-binding protein;(source:Araport11) Ipc05G0024160 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc05G0024170 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc05G0024180 AT2G41120.1 0 0 DUF309 domain protein;(source:Araport11) Ipc05G0024190 AT1G39070.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0002170 AT5G07900.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc02G0002160 AT5G54300.1 Protein of unknown function (DUF761) 0 cotton fiber-like protein (DUF761);(source:Araport11) Ipc02G0002150 AT4G16050.1 Aminotransferase-like, plant mobile domain family protein 0 Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc02G0002140 AT3G17660.1 ARF-GAP domain 15 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes; AGD15 belongs to the class 4, together with AGD14. ARF-GAP domain 15;(source:Araport11) Ipc02G0002130 AT4G19120.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0002120 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0002110 AT4G26500.1 chloroplast sulfur E Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis. chloroplast sulfur E;(source:Araport11) Ipc09G0004420 AT4G24210.1 F-box family protein F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins. F-box family protein;(source:Araport11) Ipc09G0004430 AT1G47200.1 WPP domain protein 2 WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity. WPP domain protein 2;(source:Araport11) Ipc09G0004440 AT5G10600.1 cytochrome P450, family 81, subfamily K, polypeptide 2 member of CYP81K cytochrome P450, family 81, subfamily K, polypeptide 2;(source:Araport11) Ipc09G0004450 AT5G10600.1 cytochrome P450, family 81, subfamily K, polypeptide 2 member of CYP81K cytochrome P450, family 81, subfamily K, polypeptide 2;(source:Araport11) Ipc09G0004460 AT5G67320.1 WD-40 repeat family protein Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing. WD-40 repeat family protein;(source:Araport11) Ipc09G0004470 AT1G47240.1 NRAMP metal ion transporter 2 Encodes a member of the NRAMP2 gene family of metal ion transporters that is required for root growth at low Mn conditions. NRAMP2 is mainly localized to TGN and has influx transport activity of Mn in yeast. Mutation of NRAMP2 impaired root growth, although there was greater Mn retention in the roots under Mn-deficient conditions. NRAMP metal ion transporter 2;(source:Araport11) Ipc09G0004480 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc09G0004490 AT3G19540.1 Protein of unknown function (DUF620) 0 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11) Ipc09G0004500 AT5G23200.1 0 0 C5orf35;(source:Araport11) Ipc09G0004510 AT1G27700.1 Syntaxin/t-SNARE family protein 0 Syntaxin/t-SNARE family protein;(source:Araport11) Ipc09G0004520 AT5G65860.3 0 0 ankyrin repeat family protein;(source:Araport11) Ipc09G0004530 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc09G0004540 AT5G43140.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc09G0004550 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0004560 AT5G01075.1 Glycosyl hydrolase family 35 protein Encodes a small ER-localized protein that is strongly expressed in seeds and regulates both embryo development and accumulation of storage compounds. At the cellular level, TWS1 is responsible for cuticle deposition on epidermal cells and organization of the endomembrane system. Glycosyl hydrolase family 35 protein;(source:Araport11) Ipc09G0004570 AT1G49890.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc09G0004580 AT1G27730.1 salt tolerance zinc finger Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. salt tolerance zinc finger;(source:Araport11) Ipc09G0004590 AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2 RSL2 was expressed concurrently with RSL4 and its expression was controlled by RHD6 and RSL1. Required for root-hair growth. ROOT HAIR DEFECTIVE 6-LIKE 2;(source:Araport11) Ipc09G0004600 AT1G27752.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc09G0004610 AT1G27760.3 interferon-related developmental regulator family protein / IFRD protein family Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress. interferon-related developmental regulator family protein / IFRD protein family;(source:Araport11) Ipc09G0004620 AT4G37630.1 cyclin d5;1 core cell cycle genes; a quantitative trait gene for endoreduplication. cyclin d5;(source:Araport11) Ipc09G0004630 AT3G03990.1 alpha/beta-Hydrolases superfamily protein Encodes an alpha/beta hydrolase essential for strigolactone signaling. Degradation of the protein is promoted by strigolactone. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0004640 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc09G0004650 AT3G12350.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc09G0004660 AT1G27461.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0004670 AT2G17905.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc09G0004680 AT1G60030.1 nucleobase-ascorbate transporter 7 0 nucleobase-ascorbate transporter 7;(source:Araport11) Ipc09G0004690 AT4G33800.2 0 0 hypothetical protein;(source:Araport11) Ipc09G0004700 AT1G10130.1 endoplasmic reticulum-type calcium-transporting ATPase 3 Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis. endoplasmic reticulum-type calcium-transporting ATPase 3;(source:Araport11) Ipc09G0004710 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc09G0004720 AT1G73280.1 serine carboxypeptidase-like 3 0 serine carboxypeptidase-like 3;(source:Araport11) Ipc09G0004730 AT4G39920.1 C-CAP/cofactor C-like domain-containing protein Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers. C-CAP/cofactor C-like domain-containing protein;(source:Araport11) Ipc09G0004740 AT1G10140.1 Uncharacterised conserved protein UCP031279 0 Uncharacterized conserved protein UCP031279;(source:Araport11) Ipc09G0004750 AT5G35810.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc09G0004760 AT1G27480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0004770 #N/A #N/A #N/A #N/A Ipc09G0004780 AT1G27480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0004790 AT3G49810.1 ARM repeat superfamily protein Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination. ARM repeat superfamily protein;(source:Araport11) Ipc10G0019190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0019200 AT5G57100.2 0 0 Nucleotide/sugar transporter family protein;(source:Araport11) Ipc10G0019210 AT1G30370.1 alpha/beta-Hydrolases superfamily protein Encodes a mitochondria-localized class III phospholipase A1 that plays a role in seed viability. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0019220 AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. Actin binding Calponin homology (CH) domain-containing protein;(source:Araport11) Ipc10G0019230 AT3G07470.3 0 0 transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc10G0019240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0019250 AT3G16820.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0019260 AT3G07480.1 2Fe-2S ferredoxin-like superfamily protein 0 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc10G0019270 AT1G20050.1 C-8,7 sterol isomerase C-8 sterol isomerase that also plays a role in miRNA function. C-8,7 sterol isomerase;(source:Araport11) Ipc10G0019280 AT2G19270.1 0 0 mitotic checkpoint protein PRCC-carboxy-term protein;(source:Araport11) Ipc10G0019290 AT5G53910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0019300 AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0019310 AT3G07510.3 0 0 maternal effect embryo arrest protein;(source:Araport11) Ipc10G0019320 AT4G12830.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0019330 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc10G0019340 AT3G25010.1 receptor like protein 41 0 receptor like protein 41;(source:Araport11) Ipc10G0019350 AT4G12800.2 0 Encodes subunit L of photosystem I reaction center. photosystem I subunit l;(source:Araport11) Ipc10G0019360 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0019370 AT5G48390.1 Tetratricopeptide repeat (TPR)-like superfamily protein Defective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0019380 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0019390 #N/A #N/A #N/A #N/A Ipc10G0019400 AT5G48385.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc10G0019410 AT5G36220.1 cytochrome p450 81d1 member of CYP81D family of cytochrome p450s. This gene was originally called CYP91A1, but was later renamed to CYP81D1. cytochrome p450 81d1;(source:Araport11) Ipc10G0019420 AT5G48380.1 BAK1-interacting receptor-like kinase 1 Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1;(source:Araport11) Ipc10G0019430 #N/A #N/A #N/A #N/A Ipc10G0019440 AT5G18750.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc10G0019450 AT2G02160.1 CCCH-type zinc finger family protein 0 CCCH-type zinc finger family protein;(source:Araport11) Ipc10G0019460 AT4G25360.2 TRICHOME BIREFRINGENCE-LIKE 18 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 18;(source:Araport11) Ipc10G0019470 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc10G0019480 AT5G48370.2 Thioesterase/thiol ester dehydrase-isomerase superfamily protein 0 Thioesterase/thiol ester dehydrase-isomerase superfamily protein;(source:Araport11) Ipc10G0019490 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc10G0019500 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc10G0019510 AT5G12230.1 0 0 mediator of RNA polymerase II transcription subunit 19a-like protein;(source:Araport11) Ipc10G0019520 AT5G11210.11 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.5;(source:Araport11) Ipc10G0019530 AT2G39780.1 ribonuclease 2 Encodes the main endoribonuclease activity in plant cells and localizes to the endoplasmic reticulum (ER), ER-derived structures, and vacuoles. It is essential for normal ribosomal RNA recycling. The mRNA is cell-to-cell mobile. ribonuclease 2;(source:Araport11) Ipc10G0019540 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc10G0019550 AT1G26380.1 FAD-binding Berberine family protein Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. FOX1 acts as a dehydrogenase on indole cyanohydrin to form indole carbonyl nitrile. FAD-binding Berberine family protein;(source:Araport11) Ipc10G0019560 AT1G13980.2 sec7 domain-containing protein Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions. BFA inhibits GNOM trafficking and BFA resistant lines are more resistant to cold stress. sec7 domain-containing protein;(source:Araport11) Ipc10G0019570 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0019580 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0019590 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0011010 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc02G0011000 AT5G48310.2 0 Protein of unknown function that may be involved in stress response. Strongly expressed in vascular tissues.Mutants are ABA- insensitive. portal protein;(source:Araport11) Ipc02G0010990 AT3G03050.1 cellulose synthase-like D3 encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. cellulose synthase-like D3;(source:Araport11) Ipc02G0010980 AT3G28380.1 P-glycoprotein 17 0 P-glycoprotein 17;(source:Araport11) Ipc02G0010970 AT5G03390.1 Protein of unknown function (DUF295) 0 hypothetical protein (DUF295);(source:Araport11) Ipc02G0010960 AT2G41140.1 CDPK-related kinase 1 Encodes CDPK-related kinase 1 (CRK1). CDPK-related kinase 1;(source:Araport11) Ipc02G0010950 AT1G50400.1 Eukaryotic porin family protein 0 Eukaryotic porin family protein;(source:Araport11) Ipc02G0010940 AT1G79650.2 Rad23 UV excision repair protein family Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. Rad23 UV excision repair protein family;(source:Araport11) Ipc02G0010930 AT1G79660.1 0 0 ephrin-A3 protein;(source:Araport11) Ipc02G0010920 AT1G79710.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0010910 AT1G79720.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0010900 AT3G28925.1 0 0 structural maintenance of chromosomes protein;(source:Araport11) Ipc02G0010890 AT4G31860.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0010880 AT1G80920.1 Chaperone DnaJ-domain superfamily protein A nuclear encoded soluble protein found in the chloroplast stroma. Negatively regulated by light and has rapid turnover in darkness. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0010870 AT1G16010.3 magnesium transporter 2 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 2;(source:Araport11) Ipc02G0010860 AT1G20430.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0010850 AT1G16000.1 0 Member of the Arabidopsis 7-kDa OEP family. Tail-anchored (TA) membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids. GAG1At protein;(source:Araport11) Ipc02G0010840 AT1G73060.1 Low PSII Accumulation 3 0 Low PSII Accumulation 3;(source:Araport11) Ipc02G0010830 AT1G15980.1 NDH-dependent cyclic electron flow 1 encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. NDH-dependent cyclic electron flow 1;(source:Araport11) Ipc02G0010820 AT5G57970.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc02G0010810 AT1G80840.1 WRKY DNA-binding protein 40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 40;(source:Araport11) Ipc02G0010800 AT1G15950.3 0 Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.The mRNA is cell-to-cell mobile. cinnamoyl coa reductase 1;(source:Araport11) Ipc02G0010790 AT4G31880.2 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. transcriptional regulator;(source:Araport11) Ipc02G0010780 AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei. tubulin folding cofactor E / Pfifferling (PFI);(source:Araport11) Ipc02G0010770 AT2G25110.1 stromal cell-derived factor 2-like protein precursor Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity. stromal cell-derived factor 2-like protein precursor;(source:Araport11) Ipc02G0010760 AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Deadenylase. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0010750 AT1G15910.1 XH/XS domain-containing protein Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). XH/XS domain-containing protein;(source:Araport11) Ipc02G0010740 AT2G47450.1 chloroplast signal recognition particle component (CAO) A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1. The mRNA is cell-to-cell mobile. chloroplast signal recognition particle component (CAO);(source:Araport11) Ipc02G0010730 AT1G80760.1 NOD26-like intrinsic protein 6;1 Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously. NOD26-like intrinsic protein 6;(source:Araport11) Ipc02G0010720 AT1G15900.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0010710 AT2G01250.1 Ribosomal protein L30/L7 family protein Cytosolic ribosomal 60S subunit protein. Ribosomal protein L30/L7 family protein;(source:Araport11) Ipc02G0010700 AT5G25160.1 zinc finger protein 3 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 3;(source:Araport11) Ipc02G0010690 AT1G15860.2 Domain of unknown function (DUF298) 0 defective in cullin neddylation protein (DUF298);(source:Araport11) Ipc02G0010680 AT3G42640.1 H(+)-ATPase 8 0 H[+]-ATPase 8;(source:Araport11) Ipc02G0010670 AT1G29195.1 0 0 phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein;(source:Araport11) Ipc02G0010660 AT4G32000.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0010650 AT1G80610.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0010640 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc02G0010630 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc02G0010620 AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0010610 AT5G51040.1 0 Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.Sdhaf2 knockdown line showed lowered SDH1 protein abundance, lowered maximal SDH activity and less protein-bound FAD at the molecular mass of SDH1. succinate dehydrogenase assembly factor;(source:Araport11) Ipc02G0010600 AT3G53120.1 Modifier of rudimentary (Mod(r)) protein 0 Modifier of rudimentary (Mod(r)) protein;(source:Araport11) Ipc02G0010590 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0010580 AT1G01630.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc02G0010570 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0010560 AT1G57820.3 0 Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts. Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0010550 AT5G07300.1 Calcium-dependent phospholipid-binding Copine family protein Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Calcium-dependent phospholipid-binding Copine family protein;(source:Araport11) Ipc02G0010540 AT5G50930.1 Histone superfamily protein Encodes a protein with similarity to mammalian MHF1 that acts in the same pathway as FANCM to restrain class II meiotic crossing over, and acts with FANCM during meiosis and to repair cross-links. It also assumes an opposing role from FANCM in homologous recombination and only FANCM is essential for replicative repair in the absence of the endonuclease MUS81. Histone superfamily protein;(source:Araport11) Ipc02G0010530 AT4G25080.6 0 Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope. magnesium-protoporphyrin IX methyltransferase;(source:Araport11) Ipc02G0010520 AT5G53620.3 0 0 RNA polymerase II degradation factor;(source:Araport11) Ipc02G0010500 AT2G02150.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0010510 AT3G08600.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc02G0010490 AT2G13770.1 0 0 nuclease;(source:Araport11) Ipc02G0010480 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0010470 AT4G37270.1 heavy metal atpase 1 Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions. heavy metal atpase 1;(source:Araport11) Ipc02G0010460 AT5G62000.5 0 Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.Phosphorylation of ARF2 relieves repression of transcription of HAK5 and thereby promotes potassium uptake. The mRNA is cell-to-cell mobile. auxin response factor 2;(source:Araport11) Ipc02G0010450 AT5G37600.1 glutamine synthase clone R1 encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium hypothetical protein;(source:Araport11) Ipc02G0010440 AT5G42390.1 Insulinase (Peptidase family M16) family protein Encodes a chloroplast-localized metalloprotease that is essential for embryo development. Mutants do not progress normally beyond the 16-cell stage. The mRNA is cell-to-cell mobile. Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc02G0010430 AT1G18300.1 nudix hydrolase homolog 4 0 nudix hydrolase homolog 4;(source:Araport11) Ipc02G0010420 AT3G17850.1 Protein kinase superfamily protein Protein kinase which together with IRE3 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc02G0010410 AT5G52950.1 0 0 LIM domain protein;(source:Araport11) Ipc02G0010400 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0010390 AT3G17860.1 jasmonate-zim-domain protein 3 JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine. jasmonate-zim-domain protein 3;(source:Araport11) Ipc02G0010380 AT3G17880.1 tetraticopeptide domain-containing thioredoxin Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX. tetraticopeptide domain-containing thioredoxin;(source:Araport11) Ipc02G0010370 AT3G55130.1 white-brown complex homolog 19 Encodes a vacuole localized protein of the ABC transporter White-Brown Complex (WBC) family. When overexpressed in planta, confers resistance to kanamycin. white-brown complex homolog 19;(source:Araport11) Ipc02G0010360 AT1G73550.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0010350 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc02G0010340 AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III Integral chloroplast outer membrane protein. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-III;(source:Araport11) Ipc02G0010330 AT3G17980.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0010320 AT1G73590.1 Auxin efflux carrier family protein Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. Auxin efflux carrier family protein;(source:Araport11) Ipc02G0010310 AT2G26790.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0010300 AT1G73620.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc02G0010290 AT1G18210.2 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0010280 AT1G18200.1 RAB GTPase homolog A6B 0 Rab GTPase-like A1I protein;(source:Araport11) Ipc02G0010270 AT2G32860.2 beta glucosidase 33 0 beta glucosidase 33;(source:Araport11) Ipc02G0010260 AT3G18060.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0010250 AT3G18050.1 0 0 GPI-anchored protein;(source:Araport11) Ipc02G0010240 AT3G18040.4 0 Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9;(source:Araport11) Ipc02G0010230 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc02G0010220 AT1G73660.1 protein tyrosine kinase family protein Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. protein tyrosine kinase family protein;(source:Araport11) Ipc02G0010210 AT1G18170.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0 FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0010190 AT1G53070.1 Legume lectin family protein 0 Legume lectin family protein;(source:Araport11) Ipc02G0010200 AT5G23770.2 DOMAIN OF UNKNOWN FUNCTION 724 8 Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 8);(source:Araport11) Ipc02G0010180 AT3G57660.2 0 Encodes a subunit of RNA polymerase I (aka RNA polymerase A).The mRNA is cell-to-cell mobile. nuclear RNA polymerase A1;(source:Araport11) Ipc02G0010170 AT3G18080.1 B-S glucosidase 44 0 B-S glucosidase 44;(source:Araport11) Ipc02G0010160 AT1G18090.2 5'-3' exonuclease family protein 0 5-3 exonuclease family protein;(source:Araport11) Ipc02G0010150 AT1G77320.1 transcription coactivators Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair. transcription coactivator;(source:Araport11) Ipc02G0010140 AT1G77320.2 transcription coactivators Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair. transcription coactivator;(source:Araport11) Ipc02G0010130 AT3G04830.1 Protein prenylyltransferase superfamily protein 0 Protein prenylyltransferase superfamily protein;(source:Araport11) Ipc02G0010120 AT1G08660.1 MALE GAMETOPHYTE DEFECTIVE 2 Encodes a sialyltransferase-like protein that is localized to the Golgi apparatus and is involved in pollen tube growth and pollen germination. MALE GAMETOPHYTE DEFECTIVE 2;(source:Araport11) Ipc02G0010110 AT2G31410.1 0 0 coiled-coil protein;(source:Araport11) Ipc02G0010100 AT1G18070.2 Translation elongation factor EF1A/initiation factor IF2gamma family protein 0 Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11) Ipc02G0010090 AT3G18180.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc02G0010080 AT3G53640.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0010070 AT1G01920.1 SET domain-containing protein 0 SET domain-containing protein;(source:Araport11) Ipc02G0010060 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc02G0010050 AT2G20990.1 synaptotagmin A Encodes a protein specifically localized to the ER-PM boundary with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance and mechanical stress response. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. SYT1 may have a role in membrane repair such as membrane resealing after freezing induced damage. SYT1 binds to phosphatidylinositol phosphates in vitro. It is distributed to immobile tubules and likely plays an important role in the formation of the tubular ER network as well as in cellular ER-PM tethering. synaptotagmin A;(source:Araport11) Ipc02G0010040 AT3G18170.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc02G0010030 AT3G18170.1 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc02G0010020 AT3G02600.9 0 Encodes phosphatidic acid phosphatase. Expressed during germination. lipid phosphate phosphatase 3;(source:Araport11) Ipc02G0010010 #N/A #N/A #N/A #N/A Ipc02G0010000 AT1G18030.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0009990 AT4G36990.1 heat shock factor 4 Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins. heat shock factor 4;(source:Araport11) Ipc02G0009980 AT3G18200.2 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc02G0009970 AT3G18190.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc02G0009950 AT3G43300.2 HOPM interactor 7 AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. HOPM interactor 7;(source:Araport11) Ipc02G0009960 AT3G43300.3 0 AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. HOPM interactor 7;(source:Araport11) Ipc02G0009940 AT3G43300.3 0 AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. HOPM interactor 7;(source:Araport11) Ipc02G0009930 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc02G0009920 AT1G73760.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0009910 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc02G0009900 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc02G0009890 AT3G18270.1 cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model. cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene;(source:Araport11) Ipc02G0009880 AT1G18370.1 ATP binding microtubule motor family protein Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects; seedling lethal. ATP binding microtubule motor family protein;(source:Araport11) Ipc02G0009870 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0009860 AT1G68390.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc02G0009850 AT1G48760.3 delta-adaptin Encodes the putative delta subunit of the AP(adaptor protein)-3 complex and plays a role in vacuolar function. delta-adaptin;(source:Araport11) Ipc02G0009840 AT1G67050.1 0 0 membrane-associated kinase regulator;(source:Araport11) Ipc02G0009830 AT1G48830.2 Ribosomal protein S7e family protein 0 Ribosomal protein S7e family protein;(source:Araport11) Ipc02G0009820 AT3G17730.1 NAC domain containing protein 57 0 NAC domain containing protein 57;(source:Araport11) Ipc02G0009810 AT1G71220.1 UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. EMS-MUTAGENIZED BRI1 SUPPRESSOR 1;(source:Araport11) Ipc02G0009800 AT1G73360.1 homeodomain GLABROUS 11 Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. It is involved in trichome branching. The transcription factor directly upregulates the expression of several cell-wall-loosening protein genes and reveals the important role that these target genes play in coordinating cell-wall extensibility with root development. homeodomain GLABROUS 11;(source:Araport11) Ipc02G0009790 AT1G67170.2 0 0 sarcolemmal membrane-associated protein;(source:Araport11) Ipc02G0009780 AT5G47610.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0000870 AT5G02070.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc07G0000880 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0005910 AT4G05631.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0005920 AT1G54610.3 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0005930 AT1G25440.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc12G0005940 AT3G48620.1 Outer membrane OMP85 family protein 0 Outer membrane OMP85 family protein;(source:Araport11) Ipc04G0029530 AT1G57590.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029520 AT5G45280.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029510 AT1G73640.1 RAB GTPase homolog A6A 0 RAB GTPase homolog A6A;(source:Araport11) Ipc04G0029500 AT4G09680.2 conserved telomere maintenance component 1 Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance. conserved telomere maintenance component 1;(source:Araport11) Ipc04G0029490 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0029480 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029470 AT5G18370.1 Disease resistance protein (TIR-NBS-LRR class) family Leucine-rich repeat domain (NLR) receptor. Dominant negative alleles suppress catma3 autoimmunity. disease resistance protein (TIR-NBS-LRR class) family protein;(source:Araport11) Ipc04G0029460 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0029450 AT3G17740.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0029440 AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0029430 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0029420 AT3G17740.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0029410 AT2G47300.2 ribonuclease Ps Encodes a protein involved in rRNA but not tRNA maturation. ribonuclease Ps;(source:Araport11) Ipc04G0029400 AT1G57590.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029390 AT4G19420.3 0 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029380 AT5G60950.1 COBRA-like protein 5 precursor 0 COBRA-like protein 5 precursor;(source:Araport11) Ipc04G0029370 AT4G13340.1 Leucine-rich repeat (LRR) family protein Leucine rich extensin protein involved in cell wall biogenesis and organization. Interacts with several members of the RALF family of ligand peptides. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0029360 AT5G25560.6 0 0 CHY-type/CTCHY-type/RING-type Zinc finger protein;(source:Araport11) Ipc04G0029350 AT1G63055.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0029340 AT2G25810.1 tonoplast intrinsic protein 4;1 0 tonoplast intrinsic protein 4;(source:Araport11) Ipc04G0029330 AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc04G0029320 #N/A #N/A #N/A #N/A Ipc04G0029310 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0029300 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0029290 AT5G25570.2 0 0 polyamine-modulated factor 1-binding protein;(source:Araport11) Ipc04G0029280 AT2G25730.3 0 0 zinc finger FYVE domain protein;(source:Araport11) Ipc04G0029270 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc04G0029260 AT1G18950.2 0 0 DDT domain superfamily;(source:Araport11) Ipc04G0029250 AT5G25590.1 Protein of unknown function (DUF630 and DUF632) 0 DNA ligase (DUF630 and DUF632);(source:Araport11) Ipc04G0029240 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0029230 AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein ADCL encodes a protein that acts as a 4-amino-4-deoxychorismate lyase. It catalyzes the production 4-aminobenzoate (pABA) production which is required for folate biosynthesis. The enzyme localizes to chloroplasts based on an import assay and GFP localization experiments. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc04G0029220 AT3G50390.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0029210 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc04G0029200 AT2G23470.1 Protein of unknown function, DUF647 0 root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11) Ipc04G0029190 AT1G10240.2 0 0 FAR1-related sequence 11;(source:Araport11) Ipc04G0029180 AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Encodes a m-type thioredoxin (Trx-m1) localized in chloroplast stroma. C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc04G0029170 AT1G09530.6 0 Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes. phytochrome interacting factor 3;(source:Araport11) Ipc04G0029160 AT3G05900.2 0 0 neurofilament protein-like protein;(source:Araport11) Ipc04G0029150 AT1G09540.1 myb domain protein 61 Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size. myb domain protein 61;(source:Araport11) Ipc04G0029140 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0029130 AT5G60040.2 nuclear RNA polymerase C1 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C1;(source:Araport11) Ipc04G0029120 AT3G02110.1 serine carboxypeptidase-like 25 0 serine carboxypeptidase-like 25;(source:Araport11) Ipc04G0029110 AT5G26720.1 0 0 ubiquitin carboxyl-terminal hydrolase-like protein;(source:Araport11) Ipc04G0029100 AT5G03560.4 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0029090 AT5G24710.1 Transducin/WD40 repeat-like superfamily protein WD40/YVTN repeat protein. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0029080 AT3G29763.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc04G0029070 AT5G49720.1 glycosyl hydrolase 9A1 Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. glycosyl hydrolase 9A1;(source:Araport11) Ipc04G0029060 AT2G02390.1 glutathione S-transferase zeta 1 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism. glutathione S-transferase zeta 1;(source:Araport11) Ipc04G0029050 AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Encodes a Mg2+-dependent DNA exonuclease that degrades organelle DNA during Arabidopsis pollen development. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0029040 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0029030 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc04G0029020 AT5G04950.1 nicotianamine synthase 1 Encodes a nicotianamide synthase. nicotianamine synthase 1;(source:Araport11) Ipc04G0029010 AT2G47350.1 HIT zinc finger ;PAPA-1-like conserved region 0 HIT zinc finger and PAPA-1-like domain-containing protein;(source:Araport11) Ipc04G0029000 AT5G05260.1 cytochrome p450 79a2 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc04G0028990 AT4G32850.9 nuclear poly(a) polymerase Encodes a nuclear poly(A) polymerase. Located in the nucleus. The mRNA is cell-to-cell mobile. nuclear poly(a) polymerase;(source:Araport11) Ipc04G0028980 AT1G56560.1 Plant neutral invertase family protein A/N-InvA is a neutral invertase that breaks sucrose down into fructose and glucose. It is member of the larger family of alkaline/neutral invertases (GH100). GFP-tagged A/N-InvA localizes to the mitochondria. atinva mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of A/N-InvA transcripts rise in response to a hydrogen peroxide treatment. Plant neutral invertase family protein;(source:Araport11) Ipc04G0028970 AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes LPA66, a chloroplast protein of the pentatricopeptide repeat family. In lpa66 mutants, editing of psbF that converts serine to phenylalanine is specifically impaired. lpa66 mutants also display a high chlorophyll fluorescence phenotype. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0028960 AT3G62370.1 heme binding 0 heme binding protein;(source:Araport11) Ipc04G0028950 AT1G19780.2 0 Encodes a member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility. cyclic nucleotide gated channel 8;(source:Araport11) Ipc04G0028940 AT4G08878.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0028930 AT3G48750.1 cell division control 2 A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2;(source:Araport11) Ipc04G0028920 AT5G26749.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc04G0028910 #N/A #N/A #N/A #N/A Ipc04G0028900 #N/A #N/A #N/A #N/A Ipc04G0028890 AT1G09380.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc04G0028880 AT2G32960.1 Phosphotyrosine protein phosphatases superfamily protein Encodes an atypical dual-specificity phosphatase. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc04G0028870 AT3G05870.6 0 Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle. anaphase-promoting complex/cyclosome 11;(source:Araport11) Ipc04G0028860 AT5G05780.1 RP non-ATPase subunit 8A Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity. The mRNA is cell-to-cell mobile. RP non-ATPase subunit 8A;(source:Araport11) Ipc04G0028850 #N/A #N/A #N/A #N/A Ipc04G0028840 AT5G11550.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0028830 AT2G32800.1 protein kinase family protein 0 protein kinase family protein;(source:Araport11) Ipc04G0028820 AT5G46810.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal proteinase-like protein, putative (DUF239);(source:Araport11) Ipc04G0028810 AT4G32760.3 0 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc04G0028800 AT2G25930.1 hydroxyproline-rich glycoprotein family protein Encodes a nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc04G0028790 AT5G11780.1 0 0 SNF2 domain protein;(source:Araport11) Ipc04G0028780 AT1G17620.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc04G0028770 AT1G23230.3 0 Mediator tail subunit, involved in transcriptional regulation. mediator of RNA polymerase II transcription subunit;(source:Araport11) Ipc04G0028760 AT3G29090.1 pectin methylesterase 31 Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification. pectin methylesterase 31;(source:Araport11) Ipc04G0028750 AT5G27860.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0028740 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc04G0028730 AT1G10340.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0006700 AT4G16130.1 arabinose kinase Similar to galactokinase. arabinose kinase;(source:Araport11) Ipc08G0006690 AT5G45910.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0006680 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006670 AT3G24070.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006660 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006650 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0006640 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0012700 AT3G10530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0012690 AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc09G0012680 AT1G24520.1 homolog of Brassica campestris pollen protein 1 Male fertility gene acting on tapetum and microspore homolog of Brassica campestris pollen protein 1;(source:Araport11) Ipc09G0012670 AT1G24510.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc09G0012660 AT1G67750.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc09G0012650 AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors 0 transcription initiation factor IIF subunit alpha RAP74;(source:Araport11) Ipc09G0012640 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc09G0012630 AT5G66870.1 ASYMMETRIC LEAVES 2-like 1 Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination. ASYMMETRIC LEAVES 2-like 1;(source:Araport11) Ipc09G0012620 AT5G46540.1 P-glycoprotein 7 0 P-glycoprotein 7;(source:Araport11) Ipc09G0012610 AT1G24490.1 OxaA/YidC-like membrane insertion protein Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis. The mRNA is cell-to-cell mobile. OxaA/YidC-like membrane insertion protein;(source:Araport11) Ipc09G0012600 AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0012590 AT3G26090.1 G-protein coupled receptors;GTPase activators Encodes AtRGS1, a putative membrane receptor for D-glucose. Also functions as a regulator of G-protein signaling. Has GTPase-accelerating activity. Regulates the activity of AtGPA1. Lines over-expressing the gene are more tolerant to dehydration and root elongation. These phenotypes are dependent on ABA. Nuclear localization of the protein is dependent on ABA. REGULATOR OF G-PROTEIN SIGNALING 1;(source:Araport11) Ipc09G0012580 AT3G26085.1 CAAX amino terminal protease family protein 0 CAAX amino terminal protease family protein;(source:Araport11) Ipc09G0012570 AT1G24460.1 0 Encodes a novel protein that co-immunoprecipitates with SYP41. It is involved in vacuolar trafficking and salt tolerance, potentially via a role in vesicle fusion and in maintaining TGN structure or identity. Mutants display delayed formation of the Brefeldin A (BFA) compartment in cotyledons upon application of BFA. TGN-related, localized SYP41 interacting protein;(source:Araport11) Ipc09G0012560 AT1G14700.3 0 0 purple acid phosphatase 3;(source:Araport11) Ipc09G0012550 AT2G21770.1 cellulose synthase A9 cellulose synthase, related to CESA6. cellulose synthase A9;(source:Araport11) Ipc09G0012540 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0012530 AT3G48460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc09G0012520 AT1G24440.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0012510 AT1G67720.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0012500 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc09G0012490 AT3G03300.4 0 Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. dicer-like 2;(source:Araport11) Ipc09G0012480 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc09G0012470 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc09G0012460 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc09G0012450 AT4G31850.1 proton gradient regulation 3 encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL. proton gradient regulation 3;(source:Araport11) Ipc09G0012440 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc09G0012430 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0012420 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc09G0012410 AT4G14000.1 Putative methyltransferase family protein 0 Putative methyltransferase family protein;(source:Araport11) Ipc09G0012400 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc09G0012390 AT1G03060.3 0 Encodes a WD/BEACH domain protein involved in cell morphogenesis and ribonucleoprotein particle formation. It interacts with the P-body core component DCP2, associates to mRNA processing bodies (P-bodies), and regulates their assembly upon salt stress. BEACH-DOMAIN HOMOLOG A1;(source:Araport11) Ipc09G0012380 AT5G40900.1 Nucleotide-diphospho-sugar transferase family protein 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc09G0012370 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0012360 AT3G58810.2 metal tolerance protein A2 Member of Zinc transporter (ZAT) family. Contributes to basic cellular Zn tolerance and controls Zn partitioning, particularly under conditions of high rates of Zn influx into the root symplasm. Localizes to the vacuolar membrane. metal tolerance protein A2;(source:Araport11) Ipc09G0012350 AT3G47160.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0012340 AT1G53200.1 0 0 TAF RNA polymerase I subunit A;(source:Araport11) Ipc09G0012330 #N/A #N/A #N/A #N/A Ipc09G0012320 #N/A #N/A #N/A #N/A Ipc09G0012310 AT3G26000.1 Ribonuclease inhibitor RIPF1 is an F-Box E3 ligase that interacts with the ABA receptor RCAR3 and appears to be responsible for facilitating its turnover. Ribonuclease inhibitor;(source:Araport11) Ipc09G0012300 AT1G67670.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0012290 AT1G13450.1 Homeodomain-like superfamily protein Encodes GT-1, a plant transcription factor that binds to one of the cis-acting elements, BoxII, which resides within the upstream promoter region of light-responsive genes. GT-1 was assumed to act as a molecular switch modulated through Ca(2+)-dependent phosphorylation/dephosphorylation in response to light signals. Homeodomain-like superfamily protein;(source:Araport11) Ipc09G0012280 AT3G25980.1 DNA-binding HORMA family protein Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans. DNA-binding HORMA family protein;(source:Araport11) Ipc09G0012270 AT3G13080.1 multidrug resistance-associated protein 3 encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3;(source:Araport11) Ipc09G0012260 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc09G0012250 AT1G55850.1 cellulose synthase like E1 encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile. cellulose synthase like E1;(source:Araport11) Ipc09G0012240 AT4G24880.1 0 0 snurportin-1 protein;(source:Araport11) Ipc09G0012230 AT1G20870.2 0 Encodes an anti-silencing factor that prevents gene repression and DNA hypermethylation. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc09G0012220 AT1G12420.1 ACT domain repeat 8 0 ACT domain repeat 8;(source:Araport11) Ipc09G0012210 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc09G0012200 AT3G04120.1 glyceraldehyde-3-phosphate dehydrogenase C subunit 1 encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS. The mRNA is cell-to-cell mobile. glyceraldehyde-3-phosphate dehydrogenase C subunit 1;(source:Araport11) Ipc09G0012190 AT3G04140.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc09G0012180 AT1G67630.1 DNA polymerase alpha 2 0 DNA polymerase alpha 2;(source:Araport11) Ipc09G0012170 AT1G78910.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc09G0012160 AT1G33350.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0012150 AT1G27850.1 0 0 RUN/FYVE domain protein;(source:Araport11) Ipc09G0012140 AT1G68310.2 Protein of unknown function (DUF59) Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized. Required for both leaf adaxial–abaxial polarity formation and normal cell proliferation. It is part of a protein complex with CIA1, NAR1, and MET18, which are highly conserved in eukaryotes and are involved in the biogenesis of cytosolic and nuclear Fe-S proteins. MIP18 family protein (DUF59);(source:Araport11) Ipc09G0012130 AT4G19003.6 0 0 E2F/DP family winged-helix DNA-binding domain-containing protein;(source:Araport11) Ipc09G0012120 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0012110 AT5G14285.1 0 0 DNA-binding storekeeper;(source:Araport11) Ipc09G0012100 AT3G46520.2 0 Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development. actin-12;(source:Araport11) Ipc09G0012090 AT1G64980.2 0 Encodes a putative nucleotide-diphospho-sugar transferase required for pollen germination and tube growth. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc09G0012080 AT4G32714.1 SCR-like 25 Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein). SCR-like 25;(source:Araport11) Ipc09G0012070 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0012060 AT3G25150.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc09G0012050 AT2G03670.1 cell division cycle 48B CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B cell division cycle 48B;(source:Araport11) Ipc09G0012040 AT1G24350.1 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0 Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11) Ipc09G0012030 AT1G24340.1 FAD/NAD(P)-binding oxidoreductase family protein A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. The mRNA is cell-to-cell mobile. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc09G0012020 AT1G04590.1 0 0 PPR containing-like protein;(source:Araport11) Ipc09G0012010 AT4G15770.1 RNA binding 0 RNA binding protein;(source:Araport11) Ipc13G0017120 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc13G0017130 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0017140 AT2G44480.1 beta glucosidase 17 0 beta glucosidase 17;(source:Araport11) Ipc13G0017150 AT5G49970.2 pyridoxin (pyrodoxamine) 5'-phosphate oxidase encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX. pyridoxin (pyrodoxamine) 5-phosphate oxidase;(source:Araport11) Ipc13G0017160 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017170 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0017180 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017200 AT5G06839.3 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc13G0017210 AT5G06839.1 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc13G0017220 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc13G0017230 #N/A #N/A #N/A #N/A Ipc13G0017240 AT2G31900.4 0 Encodes an novel myosin isoform. myosin-like protein XIF;(source:Araport11) Ipc13G0017250 AT1G61310.1 LRR and NB-ARC domains-containing disease resistance protein 0 LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc13G0017260 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0017270 AT3G12410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0003550 AT4G36930.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0003540 AT5G03570.4 0 Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals. iron regulated 2;(source:Araport11) Ipc15G0003530 AT5G42940.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0003520 AT1G49760.2 poly(A) binding protein 8 polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. poly(A) binding protein 8;(source:Araport11) Ipc15G0003510 AT5G67190.1 DREB and EAR motif protein 2 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. DREB and EAR motif protein 2;(source:Araport11) Ipc15G0003500 AT4G06536.1 SPla/RYanodine receptor (SPRY) domain-containing protein 0 SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11) Ipc15G0003490 AT5G47820.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0003480 AT5G47830.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0003470 AT4G24240.1 WRKY DNA-binding protein 7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. WRKY DNA-binding protein 7;(source:Araport11) Ipc15G0003460 AT5G43060.1 Granulin repeat cysteine protease family protein Peptidase, activity detected in extracts of root, leaf and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc15G0003450 AT1G47128.1 Granulin repeat cysteine protease family protein cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture. Granulin repeat cysteine protease family protein;(source:Araport11) Ipc15G0003440 AT4G39220.2 0 Key player of retrieval of ER membrane proteins Rer1 family protein;(source:Araport11) Ipc15G0003430 AT4G07390.2 0 0 Mannose-P-dolichol utilization defect 1 protein;(source:Araport11) Ipc15G0003420 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc15G0003410 AT3G53010.1 Domain of unknown function (DUF303) 0 carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc15G0003400 AT3G53010.1 Domain of unknown function (DUF303) 0 carbohydrate esterase, putative (DUF303);(source:Araport11) Ipc15G0003390 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc15G0003380 AT1G47200.1 WPP domain protein 2 WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity. WPP domain protein 2;(source:Araport11) Ipc15G0003370 AT5G10600.1 cytochrome P450, family 81, subfamily K, polypeptide 2 member of CYP81K cytochrome P450, family 81, subfamily K, polypeptide 2;(source:Araport11) Ipc15G0003360 AT2G39180.1 CRINKLY4 related 2 0 CRINKLY4 related 2;(source:Araport11) Ipc15G0003350 AT5G43080.1 Cyclin A3;1 0 Cyclin A3;(source:Araport11) Ipc15G0003340 AT1G47240.1 NRAMP metal ion transporter 2 Encodes a member of the NRAMP2 gene family of metal ion transporters that is required for root growth at low Mn conditions. NRAMP2 is mainly localized to TGN and has influx transport activity of Mn in yeast. Mutation of NRAMP2 impaired root growth, although there was greater Mn retention in the roots under Mn-deficient conditions. NRAMP metal ion transporter 2;(source:Araport11) Ipc15G0003330 AT1G35730.1 pumilio 9 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 9;(source:Araport11) Ipc15G0003320 AT5G59845.1 Gibberellin-regulated family protein Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall. Gibberellin-regulated family protein;(source:Araport11) Ipc15G0003310 AT3G19540.1 Protein of unknown function (DUF620) 0 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11) Ipc15G0003300 AT4G10330.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc15G0003290 AT1G27700.1 Syntaxin/t-SNARE family protein 0 Syntaxin/t-SNARE family protein;(source:Araport11) Ipc15G0003280 AT4G24230.1 acyl-CoA-binding domain 3 acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. Microarray data shows up-regulation of many biotic- and abiotic-stress-related genes in an ACBP3 OE-1 in comparison to wild type. acyl-CoA-binding domain 3;(source:Araport11) Ipc15G0003270 AT2G23090.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc15G0003260 AT5G43130.1 TBP-associated factor 4 0 TBP-associated factor 4;(source:Araport11) Ipc15G0003250 AT5G01075.1 Glycosyl hydrolase family 35 protein Encodes a small ER-localized protein that is strongly expressed in seeds and regulates both embryo development and accumulation of storage compounds. At the cellular level, TWS1 is responsible for cuticle deposition on epidermal cells and organization of the endomembrane system. Glycosyl hydrolase family 35 protein;(source:Araport11) Ipc15G0003240 AT1G27730.1 salt tolerance zinc finger Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. salt tolerance zinc finger;(source:Araport11) Ipc15G0003230 AT1G27450.3 adenine phosphoribosyl transferase 1 Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP. adenine phosphoribosyl transferase 1;(source:Araport11) Ipc15G0003220 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0003210 AT1G27450.4 0 Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP. adenine phosphoribosyl transferase 1;(source:Araport11) Ipc15G0003200 AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2 RSL2 was expressed concurrently with RSL4 and its expression was controlled by RHD6 and RSL1. Required for root-hair growth. ROOT HAIR DEFECTIVE 6-LIKE 2;(source:Araport11) Ipc15G0003190 AT1G27750.1 nucleic acid binding 0 nucleic acid binding protein;(source:Araport11) Ipc15G0003180 AT4G37630.1 cyclin d5;1 core cell cycle genes; a quantitative trait gene for endoreduplication. cyclin d5;(source:Araport11) Ipc15G0003170 AT1G27770.4 0 Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor. autoinhibited Ca2+-ATPase 1;(source:Araport11) Ipc15G0003160 AT3G01400.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0003150 AT5G67500.3 0 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.The mRNA is cell-to-cell mobile. voltage dependent anion channel 2;(source:Araport11) Ipc15G0003140 AT1G27840.1 Transducin/WD40 repeat-like superfamily protein Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0003130 AT1G27460.1 no pollen germination related 1 encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. The mRNA is cell-to-cell mobile. no pollen germination related 1;(source:Araport11) Ipc15G0003120 AT1G59600.1 ZCW7 0 ZCW7;(source:Araport11) Ipc15G0003110 AT1G59590.1 ZCF37 ZCF37 mRNA, complete cds The mRNA is cell-to-cell mobile. ZCF37;(source:Araport11) Ipc15G0003100 AT2G30960.1 0 0 myosin-M heavy chain-like protein;(source:Araport11) Ipc15G0003090 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc15G0003080 AT1G73300.2 0 0 serine carboxypeptidase-like 2;(source:Araport11) Ipc15G0003070 AT3G10450.1 serine carboxypeptidase-like 7 0 serine carboxypeptidase-like 7;(source:Araport11) Ipc15G0003060 AT5G65925.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0003050 AT5G65920.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0003040 AT4G37730.1 basic leucine-zipper 7 0 basic leucine-zipper 7;(source:Araport11) Ipc15G0003030 AT1G58470.2 0 Encodes an mRNA-binding protein that contains two RNA recognition motifs (RRMs) and is expressed in proliferating tissues. Preferentially binds UUAGG, GUAGG and/or UUAGU. Loss of function of RBP1 causes decreased root length. RNA-binding protein 1;(source:Araport11) Ipc15G0003020 AT1G10120.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0003010 AT4G07960.2 0 encodes a gene similar to cellulose synthase Cellulose-synthase-like C12;(source:Araport11) Ipc15G0003000 AT4G07990.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc15G0002990 AT3G49700.1 1-aminocyclopropane-1-carboxylate synthase 9 encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings. 1-aminocyclopropane-1-carboxylate synthase 9;(source:Araport11) Ipc15G0002980 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002970 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002960 AT4G27290.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002950 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002940 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002930 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002920 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002910 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002900 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002890 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002880 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc15G0002870 AT1G49510.2 0 0 embryo defective 1273;(source:Araport11) Ipc15G0002860 AT1G10070.2 branched-chain amino acid transaminase 2 Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development. branched-chain amino acid transaminase 2;(source:Araport11) Ipc15G0002850 AT4G37790.1 Homeobox-leucine zipper protein family Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper protein family;(source:Araport11) Ipc15G0002840 AT4G08150.1 KNOTTED-like from Arabidopsis thaliana A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. homeobox knotted-like protein;(source:Araport11) Ipc15G0002830 AT1G58370.2 0 Encodes a protein with xylanase activity. glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein;(source:Araport11) Ipc15G0002820 AT4G37810.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc15G0002810 AT1G10030.1 homolog of yeast ergosterol28 0 ergosterol biosynthesis protein;(source:Araport11) Ipc15G0002800 AT5G17870.1 plastid-specific 50S ribosomal protein 6 plastid-specific ribosomal protein 6 precursor (Psrp-6) - like plastid-specific 50S ribosomal protein 6;(source:Araport11) Ipc15G0002790 AT2G32160.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0002780 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc15G0002770 AT1G50010.1 tubulin alpha-2 chain Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. The mRNA is cell-to-cell mobile. tubulin alpha-2 chain;(source:Araport11) Ipc15G0002760 AT2G04570.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0002750 AT3G14250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0002740 AT1G09970.1 Leucine-rich receptor-like protein kinase family protein RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc15G0002730 AT1G09960.1 sucrose transporter 4 low affinity (10mM) sucrose transporter in sieve elements (phloem) sucrose transporter 4;(source:Araport11) Ipc15G0002720 AT1G58340.1 MATE efflux family protein Encodes a plant MATE (multidrug and toxic compound extrusion) transporter that is localized to the Golgi complex and small organelles and is involved in determining the rate of organ initiation. It is also involved in iron homeostasis when plants are under osmotic stress. MATE efflux family protein;(source:Araport11) Ipc15G0002710 AT1G27600.2 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc15G0002700 AT1G27530.1 0 0 ubiquitin-fold modifier-conjugating enzyme;(source:Araport11) Ipc15G0002690 AT4G37870.1 phosphoenolpyruvate carboxykinase 1 Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol. phosphoenolpyruvate carboxykinase 1;(source:Araport11) Ipc15G0002680 AT1G58290.1 Glutamyl-tRNA reductase family protein Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis. Glutamyl-tRNA reductase family protein;(source:Araport11) Ipc15G0002670 AT5G65640.1 beta HLH protein 93 bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages. beta HLH protein 93;(source:Araport11) Ipc15G0002660 AT1G58280.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc15G0002650 AT3G28670.3 0 0 oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc15G0002640 AT4G24400.1 CBL-interacting protein kinase 8 Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response. The mRNA is cell-to-cell mobile. CBL-interacting protein kinase 8;(source:Araport11) Ipc15G0002630 AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0002620 AT5G64410.1 oligopeptide transporter 4 oligopeptide transporter oligopeptide transporter 4;(source:Araport11) Ipc15G0002610 AT5G64410.1 oligopeptide transporter 4 oligopeptide transporter oligopeptide transporter 4;(source:Araport11) Ipc15G0002600 AT1G09930.1 oligopeptide transporter 2 oligopeptide transporter oligopeptide transporter 2;(source:Araport11) Ipc15G0002590 AT5G65613.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0002580 AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc15G0002570 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc15G0002560 AT1G09890.4 0 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc15G0002550 AT4G24440.2 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) 0 transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S);(source:Araport11) Ipc15G0002540 AT1G07840.2 Sas10/Utp3/C1D family 0 Sas10/Utp3/C1D family;(source:Araport11) Ipc15G0002530 AT1G58250.1 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots. HYPERSENSITIVE TO PI STARVATION 4;(source:Araport11) Ipc15G0002520 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0002510 AT5G49690.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0002500 AT1G58230.2 0 0 binding protein;(source:Araport11) Ipc15G0002490 AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0002480 AT4G24480.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0002470 AT4G33760.2 0 0 tRNA synthetase class II (D, K and N) family protein;(source:Araport11) Ipc15G0002460 AT3G51630.2 with no lysine (K) kinase 5 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. with no lysine (K) kinase 5;(source:Araport11) Ipc15G0002450 AT4G24520.1 P450 reductase 1 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1;(source:Araport11) Ipc15G0002440 AT1G58215.1 0 0 spindle pole body component 110;(source:Araport11) Ipc15G0002430 AT4G24530.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc15G0002420 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc15G0002410 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc15G0002400 AT5G49700.1 Predicted AT-hook DNA-binding family protein 0 Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc15G0002390 AT4G24560.1 ubiquitin-specific protease 16 Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation. ubiquitin-specific protease 16;(source:Araport11) Ipc15G0002370 AT1G05910.1 cell division cycle protein 48-related / CDC48-related Encodes an acetylated histone-binding protein BRAT1. BRAT1 forms a complex with BRP1 to prevent transcriptional silencing. cell division cycle protein 48-related / CDC48-like protein;(source:Araport11) Ipc15G0002380 AT1G09750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0002360 AT4G24570.1 dicarboxylate carrier 2 Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470). The mRNA is cell-to-cell mobile. dicarboxylate carrier 2;(source:Araport11) Ipc15G0002350 AT4G24580.2 0 Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube. Rho GTPase activation protein (RhoGAP) with PH domain-containing protein;(source:Araport11) Ipc15G0002340 AT5G65430.1 general regulatory factor 8 member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 general regulatory factor 8;(source:Araport11) Ipc15G0002330 AT2G22490.1 Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;(source:Araport11) Ipc15G0002320 AT5G50010.1 sequence-specific DNA binding transcription factors;transcription regulators 0 transcription factor bHLH145;(source:Araport11) Ipc15G0002310 AT1G28390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0002300 AT4G24660.1 homeobox protein 22 0 homeobox protein 22;(source:Araport11) Ipc15G0002290 AT1G28200.2 0 VirF-interacting protein FIP1 FH interacting protein 1;(source:Araport11) Ipc15G0002280 AT4G24380.1 0 0 dihydrofolate reductase;(source:Araport11) Ipc15G0002270 AT3G21110.3 0 5 Prime-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone. purin 7;(source:Araport11) Ipc15G0002260 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc15G0002250 AT3G05200.1 RING/U-box superfamily protein Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc15G0002240 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0002230 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0002220 AT4G09040.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc15G0002210 AT1G72230.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc15G0002200 AT3G27200.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc15G0002190 AT1G22460.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc15G0002180 AT1G11870.2 Seryl-tRNA synthetase Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Seryl-tRNA synthetase;(source:Araport11) Ipc15G0002170 AT1G22450.1 cytochrome C oxidase 6B subunit 6b of cytochrome c oxidase cytochrome C oxidase 6B;(source:Araport11) Ipc15G0002160 AT1G78310.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc15G0002150 AT1G78300.1 general regulatory factor 2 G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile. general regulatory factor 2;(source:Araport11) Ipc15G0002140 AT1G28220.1 purine permease 3 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 3;(source:Araport11) Ipc15G0002130 AT4G08980.5 F-BOX WITH WD-40 2 Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response. It is a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins. F-BOX WITH WD-40 2;(source:Araport11) Ipc15G0002120 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc15G0002110 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc15G0002100 AT1G78240.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0002090 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc15G0002080 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc15G0002070 AT1G71830.1 somatic embryogenesis receptor-like kinase 1 Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. SERK1 interacts with and transphosphorylates EMS1 somatic embryogenesis receptor-like kinase 1;(source:Araport11) Ipc15G0002060 AT1G34220.2 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc15G0002040 AT1G77920.1 bZIP transcription factor family protein 0 bZIP transcription factor family protein;(source:Araport11) Ipc15G0002050 AT4G09650.1 ATP synthase delta-subunit gene Encodes the chloroplast ATPase delta-subunit. The mRNA is cell-to-cell mobile. F-type H+-transporting ATPase subunit delta;(source:Araport11) Ipc15G0002030 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc15G0002020 AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor 0 membrane-anchored ubiquitin-fold protein 6 precursor;(source:Araport11) Ipc15G0002010 AT1G22110.3 0 0 structural constituent of ribosome;(source:Araport11) Ipc15G0002000 AT1G53050.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0001990 AT1G34000.1 one-helix protein 2 Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions. Together with OHP1, OHP2 is essential for the formation of photosystem II reaction center, even though neither is a part of the final PSII RC. It forms a complex with OHP1 and HCF244, D1, D2, PsbI, and cytochrome b559 at an early stage of PSII de novo assembly and of PSII repair under high-light conditions. one-helix protein 2;(source:Araport11) Ipc15G0001980 AT2G46735.1 0 0 death domain associated protein;(source:Araport11) Ipc15G0001970 AT1G22790.2 0 0 Low affinity potassium transport system protein;(source:Araport11) Ipc15G0001960 AT4G26780.1 Co-chaperone GrpE family protein unknown function Co-chaperone GrpE family protein;(source:Araport11) Ipc15G0001950 AT1G71696.2 carboxypeptidase D, putative Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression. carboxypeptidase D;(source:Araport11) Ipc15G0001940 AT4G39460.3 0 Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway. S-adenosylmethionine carrier 1;(source:Araport11) Ipc15G0001930 AT4G09760.2 Protein kinase superfamily protein encodes a choline synthase whose gene expression is induced by high salt and mannitol. Protein kinase superfamily protein;(source:Araport11) Ipc15G0001920 AT1G71710.2 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc15G0001910 AT1G71770.2 poly(A)-binding protein 5 Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro. poly(A)-binding protein 5;(source:Araport11) Ipc15G0001900 AT4G09720.1 RAB GTPase homolog G3A 0 RAB GTPase homolog G3A;(source:Araport11) Ipc15G0001890 AT5G64810.1 WRKY DNA-binding protein 51 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 51;(source:Araport11) Ipc15G0001880 AT4G02450.2 HSP20-like chaperones superfamily protein Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc15G0001870 AT1G34160.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0001860 AT1G14290.1 sphingoid base hydroxylase 2 Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. sphingoid base hydroxylase 2;(source:Araport11) Ipc15G0001850 AT1G71810.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0001840 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc15G0001830 AT5G20890.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc15G0001820 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc15G0001810 AT5G20890.1 TCP-1/cpn60 chaperonin family protein 0 TCP-1/cpn60 chaperonin family protein;(source:Araport11) Ipc15G0001800 AT1G14570.4 UBX domain-containing protein Encodes a nuclear UBX-containing protein that can bridge ubiquitin to AtCDC48A. UBX domain-containing protein;(source:Araport11) Ipc15G0001790 AT1G34780.1 APR-like 4 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APR-like 4;(source:Araport11) Ipc15G0001780 AT4G08920.1 cryptochrome 1 Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. The mRNA is cell-to-cell mobile. cryptochrome 1;(source:Araport11) Ipc15G0001770 AT1G34630.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0001760 AT5G64970.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0001750 AT1G79150.1 binding 0 binding protein;(source:Araport11) Ipc15G0001740 AT5G64200.2 ortholog of human splicing factor SC35 encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks. serine/arginine-rich splicing factor-like protein, putative;(source:Araport11) Ipc15G0001730 AT1G78160.1 pumilio 7 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 7;(source:Araport11) Ipc15G0001720 AT1G78140.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0001710 AT1G78130.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0001700 AT5G65160.1 tetratricopeptide repeat (TPR)-containing protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc15G0001690 AT4G39770.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc15G0001680 AT1G78080.1 related to AP2 4 Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. The mRNA is cell-to-cell mobile. related to AP2 4;(source:Araport11) Ipc15G0001670 AT1G78070.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0001660 AT1G22170.2 0 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc15G0001650 AT1G78020.1 Protein of unknown function (DUF581) FCS like zinc finger 6 is induced during energy starvation through SnRK1 signaling. Mutants accumulate more SnRK1alpha1 which results in the inhibition of seedling growth under favorable growth conditions. Increased SnRK1 activity in the mutant also results in the downregulation of TOR signaling (DOI:10.1111/tpj.13854). senescence-associated family protein, putative (DUF581);(source:Araport11) Ipc15G0001640 AT1G36160.2 acetyl-CoA carboxylase 1 Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development and is deficient in freezing tolerance after cold acclimation. Essential for very long chain fatty acid elongation. The mRNA is cell-to-cell mobile. acetyl-CoA carboxylase 1;(source:Araport11) Ipc15G0001630 AT4G08570.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc15G0001620 AT4G39680.2 SAP domain-containing protein 0 SAP domain-containing protein;(source:Araport11) Ipc15G0001610 AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc15G0001600 AT5G42440.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0001590 AT4G24630.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc15G0001580 AT3G20650.1 mRNA capping enzyme family protein 0 mRNA capping enzyme family protein;(source:Araport11) Ipc15G0001570 AT2G33710.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0001560 AT2G21770.1 cellulose synthase A9 cellulose synthase, related to CESA6. cellulose synthase A9;(source:Araport11) Ipc15G0001550 AT2G21740.1 Protein of unknown function (DUF1278) Encodes a small cysteine-rich protein that is secreted by the egg cell during gamete interactions. The regulated secretion of EC1 by the egg cell upon sperm-egg interaction is proposed to ensure the appropriate localization of the cell-fusion machinery in distinct sperm membrane domains to accomplish gamete fusion. Egg cell-secreted-like protein (DUF1278);(source:Araport11) Ipc15G0001540 AT1G43245.1 SET domain-containing protein 0 SET domain-containing protein;(source:Araport11) Ipc15G0001530 AT1G43580.1 Sphingomyelin synthetase family protein 0 Sphingomyelin synthetase family protein;(source:Araport11) Ipc15G0001520 AT1G76780.3 0 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc15G0001510 AT1G18740.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc15G0001500 AT5G16750.1 Transducin family protein / WD-40 repeat family protein Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc15G0001490 AT1G76890.2 Duplicated homeodomain-like superfamily protein encodes a plant trihelix DNA-binding protein Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc15G0001480 AT1G21200.2 0 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc15G0001470 AT1G76850.1 exocyst complex component sec5 Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. The mRNA is cell-to-cell mobile. exocyst complex component sec5;(source:Araport11) Ipc15G0001460 AT1G43690.1 ubiquitin interaction motif-containing protein 0 ubiquitin interaction motif-containing protein;(source:Araport11) Ipc15G0001450 AT2G31290.2 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc15G0001440 AT5G09810.1 actin 7 Member of Actin gene family.Mutants are defective in germination and root growth. The mRNA is cell-to-cell mobile. actin 7;(source:Araport11) Ipc15G0001430 AT3G61360.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes SLO3 (SLOW GROWTH3), a pentatricopeptide repeat protein required for the splicing of mitochondrial NADH dehydrogenase subunit7 intron 2. Mutants have smaller RAMs are slower growing than wild type. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0001420 AT1G43700.1 VIRE2-interacting protein 1 Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response. The mRNA is cell-to-cell mobile. VIRE2-interacting protein 1;(source:Araport11) Ipc15G0001410 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc15G0001400 AT1G28490.1 syntaxin of plants 61 Encodes SYP61, one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability. syntaxin of plants 61;(source:Araport11) Ipc15G0001390 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc15G0001380 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0001370 AT5G42140.2 0 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc15G0001360 AT1G21326.1 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc15G0001350 AT5G49720.1 glycosyl hydrolase 9A1 Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1. glycosyl hydrolase 9A1;(source:Araport11) Ipc15G0001340 AT1G21370.2 0 0 transmembrane protein;(source:Araport11) Ipc15G0001330 AT1G74030.1 enolase 1 Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes. enolase 1;(source:Araport11) Ipc15G0001320 AT1G26190.1 Phosphoribulokinase / Uridine kinase family TTM2 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity.It contains both a uridine kinase (UK) domain and CYTH domain. TTM2 is involved in negative regulation defense response to pathogens (PMID:28733390). Phosphoribulokinase / Uridine kinase family;(source:Araport11) Ipc15G0001310 AT5G08160.1 serine/threonine protein kinase 3 Encodes a serine/threonine protein kinase. serine/threonine protein kinase 3;(source:Araport11) Ipc15G0001300 AT4G25760.1 glutamine dumper 2 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 2;(source:Araport11) Ipc15G0001290 AT5G38790.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0001280 AT1G73880.1 UDP-glucosyl transferase 89B1 0 UDP-glucosyl transferase 89B1;(source:Araport11) Ipc15G0001270 AT3G05670.3 0 0 RING/U-box protein;(source:Araport11) Ipc15G0001260 AT5G08130.7 0 Encodes a basic helix-loop-helix (bHLH) family protein BIM1 (BES1-INTERACTING MYC-LIKE 1), involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0001250 AT1G12740.4 0 encodes a protein with cytochrome P450 domain cytochrome P450, family 87, subfamily A, polypeptide 2;(source:Araport11) Ipc15G0001240 AT5G15740.1 O-fucosyltransferase family protein RRT1 is a member of a novel glycosyltransferase famly in plants. It functions as a rhamnosyltransferase, elongating the RG-1 backbone. It functions during seed coat mucilage development. O-fucosyltransferase family protein;(source:Araport11) Ipc15G0001230 AT5G60850.1 OBF binding protein 4 Encodes a zinc finger protein. OBF binding protein 4;(source:Araport11) Ipc15G0001220 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc15G0001210 AT5G08120.1 movement protein binding protein 2C Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections. movement protein binding protein 2C;(source:Araport11) Ipc15G0001200 AT5G17390.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc15G0001190 AT3G02310.1 K-box region and MADS-box transcription factor family protein MADS-box protein, binds K domain of AG in vivo K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc15G0001180 AT3G02230.1 reversibly glycosylated polypeptide 1 RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. The mRNA is cell-to-cell mobile. reversibly glycosylated polypeptide 1;(source:Araport11) Ipc15G0001170 AT1G74110.1 cytochrome P450, family 78, subfamily A, polypeptide 10 member of CYP78A cytochrome P450, family 78, subfamily A, polypeptide 10;(source:Araport11) Ipc15G0001160 AT1G18600.1 RHOMBOID-like protein 12 Mitochondrion-located rhomboid-like protein RHOMBOID-like protein 12;(source:Araport11) Ipc15G0001150 AT1G74160.1 0 Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation. LONGIFOLIA protein;(source:Araport11) Ipc15G0001140 AT2G01918.1 PsbQ-like 3 Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity. PsbQ-like 3;(source:Araport11) Ipc15G0001130 AT5G08030.1 PLC-like phosphodiesterases superfamily protein Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc15G0001120 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc15G0001110 AT2G03630.1 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc15G0001100 AT5G61040.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0001090 AT2G33040.1 gamma subunit of Mt ATP synthase 0 gamma subunit of Mt ATP synthase;(source:Araport11) Ipc15G0001080 AT1G74240.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc15G0001070 AT1G18650.1 plasmodesmata callose-binding protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 3;(source:Araport11) Ipc15G0001060 AT1G74310.1 heat shock protein 101 Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. heat shock protein 101;(source:Araport11) Ipc15G0001050 AT5G07980.2 0 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc15G0001040 AT5G07950.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0001030 AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc15G0001020 #N/A #N/A #N/A #N/A Ipc15G0001010 AT5G15530.1 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA, biotin carboxyl carrier protein 2;(source:Araport11) Ipc15G0001000 AT5G07920.3 0 Encodes a putative diacylglycerol kinase that is mainly expressed in roots, shoots and leaves, but its enzyme product was not active in vitro. diacylglycerol kinase1;(source:Araport11) Ipc15G0000990 AT1G26580.3 0 0 ELM2 domain protein;(source:Araport11) Ipc15G0000980 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc15G0000970 AT5G07890.5 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc15G0000960 AT5G61210.2 0 membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationThe mRNA is cell-to-cell mobile. soluble N-ethylmaleimide-sensitive factor adaptor protein 33;(source:Araport11) Ipc15G0000950 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc15G0000940 AT3G25400.1 0 0 dCTP pyrophosphatase-like protein;(source:Araport11) Ipc15G0000930 AT1G74360.1 Leucine-rich repeat protein kinase family protein NILR1 encodes a serine/threonine kinase involved in defense response to nematodes. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0000920 AT1G18670.1 Protein kinase superfamily protein Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. Protein kinase superfamily protein;(source:Araport11) Ipc15G0000910 AT5G61340.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0000900 AT5G61380.1 CCT motif -containing response regulator protein Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. The mRNA is cell-to-cell mobile. CCT motif -containing response regulator protein;(source:Araport11) Ipc15G0000890 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0000880 AT1G74400.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0000870 AT2G03220.1 fucosyltransferase 1 member of Glycosyltransferase Family- 37 fucosyltransferase 1;(source:Araport11) Ipc15G0000860 AT2G03220.1 fucosyltransferase 1 member of Glycosyltransferase Family- 37 fucosyltransferase 1;(source:Araport11) Ipc15G0000850 AT2G03220.1 fucosyltransferase 1 member of Glycosyltransferase Family- 37 fucosyltransferase 1;(source:Araport11) Ipc15G0000840 AT5G61430.1 NAC domain containing protein 100 0 NAC domain containing protein 100;(source:Araport11) Ipc15G0000830 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0000820 AT1G18720.2 0 0 ER membrane protein, putative (DUF962);(source:Araport11) Ipc15G0000810 AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A4 Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins. light-harvesting chlorophyll-protein complex I subunit A4;(source:Araport11) Ipc15G0000800 AT3G29010.3 0 0 Biotin/lipoate A/B protein ligase family;(source:Araport11) Ipc15G0000790 AT5G39670.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc05G0024740 AT2G39050.1 hydroxyproline-rich glycoprotein family protein Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0024730 AT3G55160.3 0 THADA is an orphan gene in Arabidopsis thaliana. It is the only DUF2428 domain containing protein in the genome. thyroid adenoma-associated-like protein;(source:Araport11) Ipc05G0024720 AT5G04970.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc05G0024710 AT1G71450.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0024700 AT3G49400.3 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0024690 AT3G49650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0024680 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc05G0024670 AT5G25450.1 Cytochrome bd ubiquinol oxidase, 14kDa subunit 0 Cytochrome bd ubiquinol oxidase, 14kDa subunit;(source:Araport11) Ipc05G0024660 AT5G14610.4 0 0 DEAD box RNA helicase family protein;(source:Araport11) Ipc05G0024650 AT1G01090.1 pyruvate dehydrogenase E1 alpha pyruvate dehydrogenase E1 alpha subunit pyruvate dehydrogenase E1 alpha;(source:Araport11) Ipc06G0017890 AT3G44290.1 NAC domain containing protein 60 0 NAC domain containing protein 60;(source:Araport11) Ipc06G0017150 AT2G36980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc06G0017170 AT5G27260.1 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc06G0017180 AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0017200 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc06G0017240 AT5G22280.1 0 0 peptidyl-prolyl cis-trans isomerase G;(source:Araport11) Ipc06G0017260 AT2G36060.1 MMS ZWEI homologue 3 MMZ3/UEV1C encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1C can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ3/UEV1C transcripts are found at moderate levels in most plant organs, but cannot be detected in the pollen or 2 days after germination. Transcript levels do not appear to be stress-inducible. MMS ZWEI homologue 3;(source:Araport11) Ipc06G0017270 AT1G10400.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc06G0017280 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0017290 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc06G0016320 AT4G38170.1 FAR1-related sequence 9 0 FAR1-related sequence 9;(source:Araport11) Ipc06G0016330 AT4G30990.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc06G0016340 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001900 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0001910 AT2G21240.2 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4;(source:Araport11) Ipc04G0001920 AT1G15400.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001930 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001940 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001950 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0001960 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc04G0001970 AT3G63180.1 TIC-like 0 TIC-like protein;(source:Araport11) Ipc04G0001980 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc04G0001990 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025470 #N/A #N/A #N/A #N/A Ipc01G0025480 AT2G27690.1 cytochrome P450, family 94, subfamily C, polypeptide 1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. cytochrome P450, family 94, subfamily C, polypeptide 1;(source:Araport11) Ipc01G0025490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025500 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc01G0025510 #N/A #N/A #N/A #N/A Ipc01G0025520 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0025530 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc01G0025540 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc01G0025550 #N/A #N/A #N/A #N/A Ipc01G0025560 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc01G0025570 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025580 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0025590 AT1G47710.1 Serine protease inhibitor (SERPIN) family protein 0 Serine protease inhibitor (SERPIN) family protein;(source:Araport11) Ipc01G0025600 AT5G49120.1 Protein of unknown function (DUF581) 0 DUF581 family protein, putative (DUF581);(source:Araport11) Ipc01G0025610 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc01G0025620 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc13G0016600 AT2G22610.2 Di-glucose binding protein with Kinesin motor domain 0 Di-glucose binding protein with Kinesin motor domain-containing protein;(source:Araport11) Ipc13G0016610 AT5G07540.2 glycine-rich protein 16 encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). glycine-rich protein 16;(source:Araport11) Ipc13G0016620 AT3G14380.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc13G0016630 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016640 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016650 AT2G44480.1 beta glucosidase 17 0 beta glucosidase 17;(source:Araport11) Ipc13G0016660 AT2G44500.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0016670 #N/A #N/A #N/A #N/A Ipc13G0016510 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000070 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc14G0000060 AT4G16600.1 Nucleotide-diphospho-sugar transferases superfamily protein 0 Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc14G0000040 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc14G0000030 AT3G13235.3 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc14G0000020 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0000010 AT4G08040.1 1-aminocyclopropane-1-carboxylate synthase 11 encodes an aminotransferase that belongs to ACC synthase gene family structurally 1-aminocyclopropane-1-carboxylate synthase 11;(source:Araport11) Ipc09G0002210 AT3G46770.2 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc09G0002200 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0002190 AT4G31640.1 transcriptional factor B3 family protein 0 transcriptional factor B3 family protein;(source:Araport11) Ipc09G0002180 AT1G31850.4 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0002170 AT1G05680.1 Uridine diphosphate glycosyltransferase 74E2 Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment. Uridine diphosphate glycosyltransferase 74E2;(source:Araport11) Ipc09G0002150 AT1G05675.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc09G0002160 AT2G43840.2 UDP-glycosyltransferase 74 F1 UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside. UDP-glycosyltransferase 74 F1;(source:Araport11) Ipc09G0002140 AT5G12080.3 mechanosensitive channel of small conductance-like 10 Encodes a mechanosensitive (or stretch-activated) ion channel in the plasma membrane with a moderate preference for anions.Cell death activity is negatively regulated by phosphorylation while mechanosensitive properties are unaffected. mechanosensitive channel of small conductance-like 10;(source:Araport11) Ipc09G0002130 AT4G19110.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc09G0002120 AT1G31880.2 0 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with PAX, thereby timing PPSE differentiation. Dampens PIN-mediated auxin efflux. DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein;(source:Araport11) Ipc09G0002110 AT4G19100.1 Protein of unknown function (DUF3464) 0 PAM68-like protein (DUF3464);(source:Araport11) Ipc09G0002100 AT3G16030.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc09G0002090 AT1G11330.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc09G0002080 AT3G16030.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc09G0002070 AT3G16030.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc09G0002060 AT3G16030.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc09G0002050 AT3G13960.1 growth-regulating factor 5 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5;(source:Araport11) Ipc09G0002040 AT5G45550.1 Mob1/phocein family protein Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling. Mob1/phocein family protein;(source:Araport11) Ipc09G0002030 AT1G32127.2 0 0 plant viral-response family protein;(source:Araport11) Ipc09G0002020 AT5G45560.1 Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein 0 Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc09G0002010 AT5G48790.1 Domain of unknown function (DUF1995) 0 LOW PSII ACCUMULATION protein (DUF1995);(source:Araport11) Ipc09G0002000 AT5G06030.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc09G0001990 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc09G0001980 AT1G32090.1 early-responsive to dehydration stress protein (ERD4) 0 early-responsive to dehydration stress protein (ERD4);(source:Araport11) Ipc09G0001970 AT5G45610.1 protein dimerizations Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response. protein dimerization;(source:Araport11) Ipc09G0001960 AT1G31940.1 0 0 cystic fibrosis transmembrane conductance regulator;(source:Araport11) Ipc09G0001950 AT5G45620.1 Proteasome component (PCI) domain protein 0 Proteasome component (PCI) domain protein;(source:Araport11) Ipc09G0001940 AT5G62030.1 diphthamide synthesis DPH2 family protein 0 diphthamide synthesis DPH2 family protein;(source:Araport11) Ipc09G0001930 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc09G0001920 AT2G34970.1 Trimeric LpxA-like enzyme 0 Trimeric LpxA-like enzyme;(source:Araport11) Ipc09G0001910 AT4G19003.6 0 0 E2F/DP family winged-helix DNA-binding domain-containing protein;(source:Araport11) Ipc09G0001900 AT2G35540.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc09G0001890 AT3G03050.1 cellulose synthase-like D3 encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. cellulose synthase-like D3;(source:Araport11) Ipc09G0001880 AT5G52115.1 0 0 ribonuclease H superfamily polynucleotidyl transferase;(source:Araport11) Ipc09G0001870 AT1G32200.2 phospholipid/glycerol acyltransferase family protein Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol. phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc09G0001860 AT1G32220.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc09G0001850 AT1G32230.6 0 Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm.The mRNA is cell-to-cell mobile. WWE protein-protein interaction domain protein family;(source:Araport11) Ipc09G0001840 AT1G32230.3 WWE protein-protein interaction domain protein family Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. The mRNA is cell-to-cell mobile. WWE protein-protein interaction domain protein family;(source:Araport11) Ipc09G0001830 AT5G46910.1 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein H3K27me3 demethylase involved in temperature and photoperiod dependent repressing of flowering. Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc09G0001820 AT1G27000.1 Protein of unknown function (DUF1664) 0 GRIP/coiled-coil protein, putative (DUF1664);(source:Araport11) Ipc09G0001810 AT5G46880.3 0 0 homeobox-7;(source:Araport11) Ipc09G0001800 AT5G46860.1 Syntaxin/t-SNARE family protein Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic. Syntaxin/t-SNARE family protein;(source:Araport11) Ipc09G0001790 AT1G62670.2 0 Encodes a pentatricopeptide repeat protein required for 5 Prime end processing of nad9 and cox3 mRNAs in mitochondria. rna processing factor 2;(source:Araport11) Ipc09G0001780 AT1G32340.1 NDR1/HIN1-like 8 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. NDR1/HIN1-like 8;(source:Araport11) Ipc09G0001770 AT5G65120.2 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc09G0001750 AT1G32340.1 NDR1/HIN1-like 8 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. NDR1/HIN1-like 8;(source:Araport11) Ipc09G0001760 AT1G32340.1 NDR1/HIN1-like 8 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. NDR1/HIN1-like 8;(source:Araport11) Ipc09G0001740 AT5G46840.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc09G0001730 AT5G16760.1 Inositol 1,3,4-trisphosphate 5/6-kinase family protein Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11) Ipc09G0001720 AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc09G0001710 AT3G03550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0001700 AT5G46700.1 Tetraspanin family protein Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Tetraspanin family protein;(source:Araport11) Ipc09G0001690 AT4G17900.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc09G0001680 AT2G31280.3 conserved peptide upstream open reading frame 7 Encodes a LHW-like protein with 80% amino acid identity to LHW. transcription factor bHLH155-like protein;(source:Araport11) Ipc09G0001670 AT4G17895.1 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20;(source:Araport11) Ipc09G0001660 AT4G17890.1 ARF-GAP domain 8 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. ARF-GAP domain 8;(source:Araport11) Ipc09G0001650 AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. MYC2 interacts with EIN3 and EIL1 to repress hook curvature and resistance to Botrytis cinera.Its transcription is induced by dehydration stress, ABA treatment and blue light via CRY1. Negative regulator of blue light-mediated photomorphogenic growth and blue and far-red-light-regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. For example it binds to and regulates the expression of NST1. Its stability is modulated by PUB10 through polyubiquitination. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc09G0001640 AT5G46770.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0001630 AT1G22410.1 Class-II DAHP synthetase family protein 0 Class-II DAHP synthetase family protein;(source:Araport11) Ipc09G0001620 AT2G35230.3 0 Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system. VQ motif-containing protein;(source:Araport11) Ipc09G0001610 AT4G17840.1 0 0 CAAX protease self-immunity protein;(source:Araport11) Ipc09G0001600 AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc09G0001590 AT2G35270.1 Predicted AT-hook DNA-binding family protein Direct target of AGAMOUS. Regulates patterning and differentiation of reproductive organs. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc09G0001580 AT4G17950.1 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc09G0001570 AT5G46630.1 Clathrin adaptor complexes medium subunit family protein clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc09G0001560 AT4G17960.1 0 0 phospholipid hydroperoxide glutathione peroxidase;(source:Araport11) Ipc09G0001550 AT2G38695.1 0 0 Gag-Pol polyprotein/retrotransposon;(source:Araport11) Ipc09G0001540 AT2G35330.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0001530 AT2G35330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0001520 AT4G17980.2 0 Encodes ANAC071, a transcription factor involved in cell proliferation in incised inflorescence stems. NAC domain containing protein 71;(source:Araport11) Ipc09G0001500 AT2G35350.1 poltergeist like 1 Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes. poltergeist like 1;(source:Araport11) Ipc09G0001510 AT5G46580.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc09G0001490 AT2G35350.1 poltergeist like 1 Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes. poltergeist like 1;(source:Araport11) Ipc09G0001480 AT2G35360.1 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc09G0001470 AT1G32470.1 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc09G0001460 AT4G18020.9 0 Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). CheY-like two-component responsive regulator family protein;(source:Araport11) Ipc09G0001450 AT3G54230.2 suppressor of abi3-5 Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3. suppressor of abi3-5;(source:Araport11) Ipc09G0001440 AT1G73320.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0001430 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc09G0001420 AT5G47020.1 0 0 MraZ;(source:Araport11) Ipc09G0001410 AT5G47040.1 lon protease 2 Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 2;(source:Araport11) Ipc09G0001400 AT1G32740.1 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc09G0001390 AT5G47060.2 0 0 hypothetical protein (DUF581);(source:Araport11) Ipc09G0001380 AT4G17140.3 pleckstrin homology (PH) domain-containing protein 0 pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc09G0001370 AT4G17090.1 chloroplast beta-amylase Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).BAM3 activity declines 2 and 4 days after start of cold stress despite an increase in transcript levels. BAM3 activity has a lower temperature optimum than BAM1 (PMID:25293962). chloroplast beta-amylase;(source:Araport11) Ipc09G0001360 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc09G0001350 AT2G35190.1 novel plant snare 11 plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate. Putative plant snare 11;(source:Araport11) Ipc09G0001340 AT1G05490.1 chromatin remodeling 31 Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs. chromatin remodeling 31;(source:Araport11) Ipc09G0001330 AT1G05490.1 chromatin remodeling 31 Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs. chromatin remodeling 31;(source:Araport11) Ipc09G0001320 AT3G60240.4 eukaryotic translation initiation factor 4G protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. eukaryotic translation initiation factor 4G;(source:Araport11) Ipc09G0001310 AT4G17080.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc09G0001300 AT4G17620.1 glycine-rich protein Mediates the connection between RNA turnover and retrograde chloroplast-to-nucleus signaling. glycine-rich protein;(source:Araport11) Ipc09G0001290 AT4G17070.1 peptidyl-prolyl cis-trans isomerases 0 peptidyl-prolyl cis-trans isomerase;(source:Araport11) Ipc09G0001280 AT5G41150.1 Restriction endonuclease, type II-like superfamily protein Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins Restriction endonuclease, type II-like superfamily protein;(source:Araport11) Ipc09G0001270 AT5G04770.1 cationic amino acid transporter 6 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. cationic amino acid transporter 6;(source:Araport11) Ipc09G0001260 AT4G17600.1 Chlorophyll A-B binding family protein Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. The mRNA is cell-to-cell mobile. Chlorophyll A-B binding family protein;(source:Araport11) Ipc09G0001250 AT4G17040.1 CLP protease R subunit 4 HON5 (At4g17040) encodes the ClpR4 subunit of the chloroplast-localized Clp protease complex. hon mutations disturb plastid protein homeostasis, thereby activating plastid signaling and inducing stress acclimatization. CLP protease R subunit 4;(source:Araport11) Ipc09G0001240 AT4G22070.4 0 member of WRKY Transcription Factor; Group II-b WRKY DNA-binding protein 31;(source:Araport11) Ipc09G0001230 AT4G17570.3 GATA transcription factor 26 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 26;(source:Araport11) Ipc09G0001220 AT5G47180.2 Plant VAMP (vesicle-associated membrane protein) family protein 0 Plant VAMP (vesicle-associated membrane protein) family protein;(source:Araport11) Ipc09G0001210 #N/A #N/A #N/A #N/A Ipc09G0001200 AT5G47200.1 RAB GTPase homolog 1A AtRabD2b encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation. The mRNA is cell-to-cell mobile. RAB GTPase homolog 1A;(source:Araport11) Ipc09G0001190 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc09G0001180 AT4G16820.1 alpha/beta-Hydrolases superfamily protein Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0001170 AT5G51210.1 oleosin3 Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. oleosin3;(source:Araport11) Ipc09G0001160 AT5G47220.1 ethylene responsive element binding factor 2 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box–dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation. ethylene responsive element binding factor 2;(source:Araport11) Ipc09G0001150 AT4G17490.1 ethylene responsive element binding factor 6 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. ethylene responsive element binding factor 6;(source:Araport11) Ipc09G0001140 AT1G79120.2 0 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc09G0001130 AT1G22860.1 Vacuolar sorting protein 39 0 Vacuolar sorting protein 39;(source:Araport11) Ipc09G0001120 AT4G16765.6 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc09G0001110 AT4G16760.1 acyl-CoA oxidase 1 Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate. acyl-CoA oxidase 1;(source:Araport11) Ipc09G0001100 AT4G32800.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc09G0001090 AT5G47400.1 0 0 sphingomyelin phosphodiesterase;(source:Araport11) Ipc09G0001080 AT4G16700.1 phosphatidylserine decarboxylase 1 Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers. phosphatidylserine decarboxylase 1;(source:Araport11) Ipc09G0001070 AT3G52420.1 outer envelope membrane protein 7 encodes a 7 kDa chloroplast outer envelope membrane protein. outer envelope membrane protein 7;(source:Araport11) Ipc09G0001060 AT4G17330.3 0 gene of unknown function expressed in seedlings, flower buds and stems G2484-1 protein;(source:Araport11) Ipc09G0001050 AT4G16650.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc09G0001040 AT4G17310.8 0 0 hypothetical protein;(source:Araport11) Ipc09G0001030 AT5G47470.1 Nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein Nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc09G0001020 AT1G02030.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc09G0001010 AT5G47490.2 0 0 RGPR-like protein;(source:Araport11) Ipc09G0001000 AT5G47490.2 0 0 RGPR-like protein;(source:Araport11) Ipc09G0000990 AT5G17550.1 peroxin 19-2 Encodes the predominant PEX19 peroxin isoform, a cytosolic chaperone for peroxisome membrane proteins (PMPs) that delivers PMPs to the endoplasmic reticulum or peroxisomal membrane. It is predominantly cytosolic, forms dimers, promotes peroxisome function and is essential for viability. The protein is farnesylated in vivo through the actions of ERA1 and PLP. peroxin 19-2;(source:Araport11) Ipc09G0000980 AT5G28520.2 0 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc09G0000970 AT2G35720.1 DNAJ heat shock N-terminal domain-containing protein Encodes OWL1, a J-domain protein involved in perception of very low light fluences. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc09G0000960 AT5G47510.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc09G0000950 AT4G00150.1 GRAS family transcription factor Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization. GRAS family transcription factor;(source:Araport11) Ipc09G0000940 AT4G16515.1 0 Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). root meristem growth factor;(source:Araport11) Ipc09G0000930 AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain 0 YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein;(source:Araport11) Ipc09G0000920 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc09G0000910 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0000900 AT2G13620.1 cation/hydrogen exchanger 15 member of Putative Na+/H+ antiporter family cation/hydrogen exchanger 15;(source:Araport11) Ipc09G0000890 AT1G62500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0000880 AT1G12110.1 nitrate transporter 1.1 Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium. Affects flowering time via interaction with the FLC dependent flowering pathway to influence its target gene FT. nitrate transporter 1.1;(source:Araport11) Ipc09G0000870 AT4G22540.5 0 0 OSBP(oxysterol binding protein)-related protein 2A;(source:Araport11) Ipc09G0000860 AT5G02810.2 0 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7;(source:Araport11) Ipc09G0000850 AT4G22550.1 Phosphatidic acid phosphatase (PAP2) family protein 0 Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11) Ipc09G0000840 AT1G62520.1 0 0 sulfated surface-like glycoprotein;(source:Araport11) Ipc09G0000830 AT4G12440.3 0 0 adenine phosphoribosyl transferase 4;(source:Araport11) Ipc09G0000820 AT1G12120.1 Plant protein of unknown function (DUF863) 0 hypothetical protein (DUF863);(source:Araport11) Ipc09G0000810 AT1G62620.1 Flavin-binding monooxygenase family protein 0 Flavin-binding monooxygenase family protein;(source:Araport11) Ipc09G0000800 AT4G22580.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc09G0000790 AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc09G0000780 AT4G22620.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc09G0000770 AT1G62710.1 beta vacuolar processing enzyme Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins. beta vacuolar processing enzyme;(source:Araport11) Ipc09G0000760 AT4G12400.2 stress-inducible protein, putative Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. stress-inducible protein;(source:Araport11) Ipc09G0000750 AT1G62780.1 0 0 dimethylallyl, adenosine tRNA methylthiotransferase;(source:Araport11) Ipc09G0000740 AT1G62790.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc09G0000730 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc09G0000720 AT4G12340.1 copper ion binding 0 copper ion binding protein;(source:Araport11) Ipc09G0000710 AT4G12290.1 Copper amine oxidase family protein 0 Copper amine oxidase family protein;(source:Araport11) Ipc09G0000700 AT4G00110.1 UDP-D-glucuronate 4-epimerase 3 Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. UDP-D-glucuronate 4-epimerase 3;(source:Araport11) Ipc09G0000690 AT4G12230.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0000680 AT2G45360.1 Protein of unknown function (DUF1442) 0 ankyrin repeat/KH domain protein (DUF1442);(source:Araport11) Ipc09G0000670 AT1G62850.3 Class I peptide chain release factor 0 Class I peptide chain release factor;(source:Araport11) Ipc09G0000660 AT4G22740.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc09G0000650 AT1G12380.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0000640 AT2G27830.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0000630 AT1G12390.1 Cornichon family protein 0 Cornichon family protein;(source:Araport11) Ipc09G0000620 AT1G12400.2 0 0 Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11) Ipc09G0000610 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc09G0000600 AT1G12420.1 ACT domain repeat 8 0 ACT domain repeat 8;(source:Araport11) Ipc09G0000590 AT4G22790.1 MATE efflux family protein Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing. MATE efflux family protein;(source:Araport11) Ipc09G0000580 AT4G22790.1 MATE efflux family protein Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing. MATE efflux family protein;(source:Araport11) Ipc09G0000570 AT4G22810.1 Predicted AT-hook DNA-binding family protein 0 Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc09G0000560 AT1G12430.1 armadillo repeat kinesin 3 Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. It accumulates at the preprophase band (PPB) in a cell-cycle and microtubule-dependent manner and is most highly expressed in cells where the placement of the division plane (early embryogenesis, stomatal lineages) is critical. armadillo repeat kinesin 3;(source:Araport11) Ipc09G0000550 AT4G12040.2 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc09G0000540 AT3G60890.2 protein binding 0 binding protein;(source:Araport11) Ipc09G0000530 AT4G22840.1 Sodium Bile acid symporter family 0 Sodium Bile acid symporter family;(source:Araport11) Ipc09G0000520 AT1G12450.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc09G0000510 AT1G12460.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc09G0000500 AT1G12480.1 C4-dicarboxylate transporter/malic acid transport protein Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. C4-dicarboxylate transporter/malic acid transport protein;(source:Araport11) Ipc09G0000490 AT1G12500.1 Nucleotide-sugar transporter family protein 0 Nucleotide-sugar transporter family protein;(source:Araport11) Ipc09G0000480 AT4G11980.1 nudix hydrolase homolog 14 0 nudix hydrolase homolog 14;(source:Araport11) Ipc09G0000470 AT1G12520.1 copper chaperone for SOD1 Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. copper chaperone for SOD1;(source:Araport11) Ipc09G0000460 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc09G0000450 AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc09G0000440 AT4G22910.1 FIZZY-related 2 0 FIZZY-related 2;(source:Araport11) Ipc09G0000430 AT4G11910.1 0 Acts antagonistically with SGR1 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells. STAY-GREEN-like protein;(source:Araport11) Ipc09G0000420 #N/A #N/A #N/A #N/A Ipc09G0000410 AT4G11860.1 Protein of unknown function (DUF544) 0 FAM63A-like protein (DUF544);(source:Araport11) Ipc09G0000400 AT1G63000.1 nucleotide-rhamnose synthase/epimerase-reductase 0 nucleotide-rhamnose synthase/epimerase-reductase;(source:Araport11) Ipc09G0000390 AT4G11820.2 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant. hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase;(source:Araport11) Ipc09G0000380 AT5G51920.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc09G0000370 AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein Encodes a member of the PHOSPHATE TRANSPORTER 5 family (PHT5;3). Overexpression of PHT5:3 leads to Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes. Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein;(source:Araport11) Ipc09G0000360 AT1G63020.2 nuclear RNA polymerase D1A Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A;(source:Araport11) Ipc09G0000350 AT5G18800.2 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc09G0000340 AT4G25470.1 C-repeat/DRE binding factor 2 Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF2). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to low temperature, abscisic acid, and circadian rhythm. Overexpressing this gene leads to increased freeze tolerance and induces the expression level of 85 cold-induced genes and reduces the expression level of 8 cold-repressed genes, which constitute the CBF2 regulon. Mutations in CBF2 increases the expression level of CBF1 and CBF3, suggesting that this gene may be involved in a negative regulatory or feedback circuit of the CBF pathway. C-repeat/DRE binding factor 2;(source:Araport11) Ipc09G0000330 AT5G52020.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc09G0000320 AT1G12640.1 MBOAT (membrane bound O-acyl transferase) family protein Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds. MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11) Ipc09G0000310 AT1G12710.1 phloem protein 2-A12 This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities. phloem protein 2-A12;(source:Araport11) Ipc09G0000300 AT4G23050.1 PAS domain-containing protein tyrosine kinase family protein 0 PAS domain-containing protein tyrosine kinase family protein;(source:Araport11) Ipc09G0000290 AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc09G0000280 AT1G12780.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress. UDP-D-glucose/UDP-D-galactose 4-epimerase 1;(source:Araport11) Ipc09G0000270 AT5G52230.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 13;(source:Araport11) Ipc09G0000260 AT2G45800.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc09G0000250 AT4G00660.2 RNAhelicase-like 8 0 RNAhelicase-like 8;(source:Araport11) Ipc09G0000240 AT5G23750.2 Remorin family protein 0 Remorin family protein;(source:Araport11) Ipc09G0000230 AT1G63300.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc09G0000220 AT3G14260.1 Protein of unknown function (DUF567) 0 LURP-one-like protein (DUF567);(source:Araport11) Ipc09G0000210 AT1G63440.1 heavy metal atpase 5 The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed. heavy metal atpase 5;(source:Araport11) Ipc09G0000200 AT1G63450.1 root hair specific 8 Encodes a xyloglucan-specific galacturonosyltransferase (XUT1) that forms the beta-d-galactosyluronic acid-(1->2)-alpha-d-xylosyl linkage. root hair specific 8;(source:Araport11) Ipc09G0000190 AT4G11600.1 glutathione peroxidase 6 Encodes glutathione peroxidase. glutathione peroxidase 6;(source:Araport11) Ipc09G0000180 AT1G63460.1 glutathione peroxidase 8 Encodes GPX8 (glutathione peroxidase 8). Involved in the suppression of oxidative damages in nucleus and cytosol. The mRNA is cell-to-cell mobile. glutathione peroxidase 8;(source:Araport11) Ipc09G0000170 AT1G63490.4 0 Histone demethylase belonging to the KDM5/JARID1 family which plays crucial roles in response to dehydration stress and abscisic acid (ABA). Directly binds the chromatin of OPEN STOMATA 1 (OST1) and demethylated H3K4me3 for the regulation of OST1 mRNA abundance, thereby modulating the dehydration stress response. transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc09G0000160 AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein 0 bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc09G0000150 AT4G11450.1 Protein of unknown function (DUF3527) 0 bromo-adjacent domain protein, putative (DUF3527);(source:Araport11) Ipc09G0000140 AT1G63680.3 0 Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. ALBINO OR PALE-GREEN 13;(source:Araport11) Ipc09G0000130 AT1G63700.2 0 Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. Protein kinase superfamily protein;(source:Araport11) Ipc09G0000120 AT5G41330.2 0 0 BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11) Ipc09G0000110 AT3G15620.1 DNA photolyase family protein Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana. DNA photolyase family protein;(source:Araport11) Ipc09G0000100 AT5G11420.1 Protein of unknown function, DUF642 0 transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc09G0000090 AT5G11420.1 Protein of unknown function, DUF642 0 transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc09G0000080 AT1G52720.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0000070 AT3G15610.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc09G0000060 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0000050 AT1G52760.1 lysophospholipase 2 Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2). lysophospholipase 2;(source:Araport11) Ipc09G0000040 AT1G80300.1 nucleotide transporter 1 Encodes an ATP/ADP transporter. The mRNA is cell-to-cell mobile. nucleotide transporter 1;(source:Araport11) Ipc09G0000030 AT1G52770.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc09G0000020 AT3G17770.1 Dihydroxyacetone kinase 0 Dihydroxyacetone kinase;(source:Araport11) Ipc09G0000010 AT2G45310.1 UDP-D-glucuronate 4-epimerase 4 UDP-D-glucuronate 4-epimerase UDP-D-glucuronate 4-epimerase 4;(source:Araport11) Ipc10G0018900 AT3G50480.1 homolog of RPW8 4 Homolog of RPW8 homolog of RPW8 4;(source:Araport11) Ipc10G0018910 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018920 AT5G44940.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0018930 AT5G58900.1 Homeodomain-like transcriptional regulator R-R-type MYB protein Homeodomain-like transcriptional regulator;(source:Araport11) Ipc10G0018940 AT4G16960.1 Disease resistance protein (TIR-NBS-LRR class) family Redundant function together with SIKIC1 and 2 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2. disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0018950 AT5G51390.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0018960 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0018970 AT5G48600.2 structural maintenance of chromosome 3 member of SMC subfamily structural maintenance of chromosome 3;(source:Araport11) Ipc10G0018980 AT5G13400.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0018990 AT5G58850.1 myb domain protein 119 Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB119). myb domain protein 119;(source:Araport11) Ipc02G0013360 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc10G0019000 AT5G49930.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0019020 AT4G18820.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc10G0019030 #N/A #N/A #N/A #N/A Ipc10G0019040 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc08G0005570 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc08G0005580 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0005590 AT1G61380.1 S-domain-1 29 Encodes a membrane localized S-domain receptor kinase that is involved in lipopolysaccharide (LPS) sensing. SD1-29 detected LPS of Pseudomonas and Xanthomonas species for which it serves as a microbe associated molecular pattern triggering innate immunity. Loses of function mutants are hyper susceptible to P.syringae. S-domain-1 29;(source:Araport11) Ipc08G0005600 AT5G50960.1 nucleotide binding protein 35 Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal. nucleotide binding protein 35;(source:Araport11) Ipc08G0005610 AT1G01530.1 AGAMOUS-like 28 0 AGAMOUS-like 28;(source:Araport11) Ipc08G0005620 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017290 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc13G0017300 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc14G0002200 AT5G45300.1 beta-amylase 2 Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays. beta-amylase 2;(source:Araport11) Ipc14G0002190 AT5G45300.3 0 Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays. beta-amylase 2;(source:Araport11) Ipc14G0002180 AT5G41980.1 0 0 nuclease;(source:Araport11) Ipc14G0002170 AT4G23020.2 0 0 hypothetical protein;(source:Araport11) Ipc14G0002160 AT4G11790.1 Pleckstrin homology (PH) domain superfamily protein 0 Pleckstrin homology (PH) domain superfamily protein;(source:Araport11) Ipc14G0002150 AT1G64810.1 Arabidopsis thaliana protein of unknown function (DUF794) Encodes a chloroplast localized RNA binding protein that is involved in group II intron splicing. Splicing defects can account for the loss of photosynthetic complexes in apo1 mutants. APO RNA-binding protein (DUF794);(source:Araport11) Ipc14G0002140 AT4G11690.1 Pentatricopeptide repeat (PPR-like) superfamily protein Encodes ABO8, a pentatricopeptide repeat (PPR) protein responsible for the splicing of NAD4 intron 3 in mitochondrial complex I. Abo8 mutants accumulate more reactive oxygen species (ROS) in root tips than the wild type. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc14G0002130 AT2G25700.1 SKP1-like 3 E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 (At3), putative, E3 ubiquitin ligase; similar to fimbriata-associated protein fap1 GI:2673868 from (Antirrhinum majus. Interacts with F-box proteins. SKP1-like 3;(source:Araport11) Ipc14G0002120 AT1G63020.2 nuclear RNA polymerase D1A Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing. nuclear RNA polymerase D1A;(source:Araport11) Ipc14G0002110 AT1G56080.1 0 NAI1 interacting protein, involved in ER body formation. interactor of constitutive active ROPs protein;(source:Araport11) Ipc14G0002100 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0002090 AT5G09690.12 0 Transmembrane magnesium transporter. One of nine family members. Loss of function mutants exhibit poor growth under magnesium stress conditions. Splice variant AT5G09690.1 (386 aa) is a functional transporter while AT5G09690.4 (371 aa) does not have transporter activity. magnesium transporter 7;(source:Araport11) Ipc14G0002080 AT5G25440.2 0 Receptor like kinase involved in HopZ1a effector triggered immunity. Interacts with ZAR1. Localization to membrane is dependent on N-terminal myristoylation domain. Protein kinase superfamily protein;(source:Araport11) Ipc14G0002070 #N/A #N/A #N/A #N/A Ipc14G0002060 AT1G12560.1 expansin A7 Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Containing a conserved root hair-specific cis-element RHE. Expressed specifically in root hair cell and involved in root hair elongation. expansin A7;(source:Araport11) Ipc14G0002050 AT4G22900.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc14G0002040 AT4G22950.3 0 MADS-box protein AGL19 AGAMOUS-like 19;(source:Araport11) Ipc14G0002030 AT2G42010.1 phospholipase D beta 1 phospholipase D (PLDbeta) phospholipase D beta 1;(source:Araport11) Ipc14G0002020 AT4G11820.2 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant. hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase;(source:Araport11) Ipc14G0002010 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0002000 AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein Ortholog of maize IPE1 gene which is involved in pollen exine development. Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) Ipc14G0001990 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0001980 AT2G30790.1 photosystem II subunit P-2 Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. photosystem II subunit P-2;(source:Araport11) Ipc14G0001970 AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein Encodes a member of the PHOSPHATE TRANSPORTER 5 family (PHT5;3). Overexpression of PHT5:3 leads to Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes. Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein;(source:Araport11) Ipc14G0001960 AT2G36895.3 0 0 D-tagatose-1,6-bisphosphate aldolase subunit;(source:Araport11) Ipc14G0001950 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0001940 AT1G18790.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc14G0001930 AT5G16590.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0001920 AT1G70000.2 myb-like transcription factor family protein Encodes a MYB-like Domain transcription factor that plays a positive role in anthocyanin accumulation in response to light and cytokinin via repression of MYBL2.MYBD expression increased in response to light or cytokinin, and MYBD enhanced anthocyanin biosynthesis via the repression of MYBL2 encoding for a transcription factor that had a negative effect on this process. In addition, MYBD can bind in vivo to the MYBL2 promoter and a lower level of histone H3K9 acetylation (H3K9ac) at upstream region of MYBL2 in MYBD-OX in comparison to wild-type plants, implies that MYBD represses MYBL2 expression via an epigenetic mechanism. myb-like transcription factor family protein;(source:Araport11) Ipc14G0001910 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc14G0001900 AT5G02880.1 ubiquitin-protein ligase 4 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. The mRNA is cell-to-cell mobile. ubiquitin-protein ligase 4;(source:Araport11) Ipc14G0001890 AT5G13530.2 protein kinases;ubiquitin-protein ligases Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. protein kinases;(source:Araport11) Ipc14G0001880 #N/A #N/A #N/A #N/A Ipc14G0001870 AT3G02660.2 0 0 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial;(source:Araport11) Ipc14G0001860 AT1G20920.7 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0001850 AT3G57630.2 exostosin family protein Encodes a glycoprotein glycosyl transferase ExAD. Knockout mutants show truncated root hair phenotype. exostosin family protein;(source:Araport11) Ipc14G0001840 AT2G39620.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0001830 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc14G0001820 AT5G66540.2 0 0 U3 small nucleolar ribonucleoprotein;(source:Araport11) Ipc14G0001810 AT4G22890.3 PGR5-LIKE A Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). The mRNA is cell-to-cell mobile. PGR5-LIKE A;(source:Araport11) Ipc14G0001800 AT4G22880.3 0 encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation. leucoanthocyanidin dioxygenase;(source:Araport11) Ipc14G0001790 AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein Encodes a hydroxypyruvate reductase that reduces HP to glycerate and shows even more activity with glyoxylate, a more upstream intermediate of the photorespiratory cycle. It is likely targeted to the chloroplast where it could provide a compensatory bypass for the reduction of HP and glyoxylate within this compartment. Together with HPPR2 and TAT1 involved in the biosynthesis of pHPL from tyrosine. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc14G0001780 AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc14G0001770 AT4G11970.5 0 0 YTH family protein;(source:Araport11) Ipc14G0001760 AT1G12530.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0001750 AT5G67360.1 Subtilase family protein Encodes a subtilisin-like serine protease essential for mucilage release from seed coats. Subtilase family protein;(source:Araport11) Ipc14G0001740 AT3G17675.1 Cupredoxin superfamily protein Encodes a Plantacyanin/Basic blue family protein Cupredoxin superfamily protein;(source:Araport11) Ipc14G0001730 AT3G17675.1 Cupredoxin superfamily protein Encodes a Plantacyanin/Basic blue family protein Cupredoxin superfamily protein;(source:Araport11) Ipc14G0001720 AT4G22860.1 Cell cycle regulated microtubule associated protein 0 Cell cycle regulated microtubule associated protein;(source:Araport11) Ipc14G0001710 AT1G12450.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc14G0001700 AT3G07500.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc14G0001690 AT3G60890.2 protein binding 0 binding protein;(source:Araport11) Ipc14G0001680 AT4G12040.2 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc14G0001670 AT1G12430.1 armadillo repeat kinesin 3 Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. It accumulates at the preprophase band (PPB) in a cell-cycle and microtubule-dependent manner and is most highly expressed in cells where the placement of the division plane (early embryogenesis, stomatal lineages) is critical. armadillo repeat kinesin 3;(source:Araport11) Ipc14G0001660 AT3G60870.1 AT-hook motif nuclear-localized protein 18 Encodes an AT hook domain containing protein that, when overexpressed, delays flowering. AT-hook motif nuclear-localized protein 18;(source:Araport11) Ipc14G0001620 AT4G12060.1 Double Clp-N motif protein 0 Double Clp-N motif protein;(source:Araport11) Ipc14G0001650 AT1G32120.1 0 0 serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc14G0001640 AT4G22790.1 MATE efflux family protein Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing. MATE efflux family protein;(source:Araport11) Ipc14G0001630 AT4G22790.1 MATE efflux family protein Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing. MATE efflux family protein;(source:Araport11) Ipc02G0000750 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0000760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000770 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000780 AT2G04020.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc02G0000790 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0000800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000810 AT4G03010.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc03G0007150 AT2G46930.1 Pectinacetylesterase family protein Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves. Pectinacetylesterase family protein;(source:Araport11) Ipc03G0007160 AT5G53250.1 arabinogalactan protein 22 0 arabinogalactan protein 22;(source:Araport11) Ipc03G0007170 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0007180 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc03G0007190 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc03G0007200 AT2G12646.2 0 0 PLATZ transcription factor family protein;(source:Araport11) Ipc03G0007210 AT1G02070.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc03G0007220 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc03G0007230 AT2G47910.1 chlororespiratory reduction 6 Encodes a chloroplast thylakoid membrane protein. Required for the assembly/accumulation of the NAD(P)H dehydrogenase complex of the photosynthetic electron transport chain. chlororespiratory reduction 6;(source:Araport11) Ipc03G0007240 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc03G0007250 AT1G72275.2 0 0 LOW protein: nuclease-like protein;(source:Araport11) Ipc03G0007260 AT2G12550.1 ubiquitin-associated (UBA)/TS-N domain-containing protein 0 ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11) Ipc03G0007270 AT5G64050.1 glutamate tRNA synthetase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. glutamate tRNA synthetase;(source:Araport11) Ipc03G0007280 AT4G32070.2 0 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc03G0007290 AT1G15740.1 Leucine-rich repeat family protein 0 Leucine-rich repeat family protein;(source:Araport11) Ipc03G0007300 AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11) Ipc03G0007310 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc03G0007320 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc03G0007330 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc03G0007340 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc03G0007350 AT2G17265.1 homoserine kinase Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutation of this gene results in higher level of the amino acid homoserine and resistance to downy mildew pathogen Hyaloperonospora arabidopsidis. homoserine kinase;(source:Araport11) Ipc03G0007360 AT2G11910.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0007370 AT2G11890.1 adenylate cyclases Encodes a tripolyphosphatase that is involved in root development. adenylate cyclase;(source:Araport11) Ipc03G0007380 AT2G46760.1 D-arabinono-1,4-lactone oxidase family protein 0 D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc03G0007390 AT5G34940.2 glucuronidase 3 The protein is predicted (WoLF PSORT program) to be membrane-associated. glucuronidase 3;(source:Araport11) Ipc03G0007400 AT5G20380.1 phosphate transporter 4;5 Encodes an inorganic phosphate transporter (PHT4;5). phosphate transporter 4;(source:Araport11) Ipc03G0007410 AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of ndhB. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0007420 AT5G20400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc03G0007430 AT1G15710.1 prephenate dehydrogenase family protein 0 prephenate dehydrogenase family protein;(source:Araport11) Ipc03G0007440 AT1G15690.1 Inorganic H pyrophosphatase family protein Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1. The mRNA is cell-to-cell mobile. Inorganic H pyrophosphatase family protein;(source:Araport11) Ipc03G0007450 AT5G20410.1 monogalactosyldiacylglycerol synthase 2 Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. monogalactosyldiacylglycerol synthase 2;(source:Araport11) Ipc03G0007460 AT5G10790.1 ubiquitin-specific protease 22 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 22;(source:Araport11) Ipc03G0007470 AT5G50900.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc03G0007480 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc03G0007490 AT1G05500.1 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc03G0007500 AT5G33280.1 Voltage-gated chloride channel family protein 0 Voltage-gated chloride channel family protein;(source:Araport11) Ipc03G0007510 AT5G20280.1 sucrose phosphate synthase 1F Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted. sucrose phosphate synthase 1F;(source:Araport11) Ipc03G0007520 AT5G20270.1 heptahelical transmembrane protein1 heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors heptahelical transmembrane protein1;(source:Araport11) Ipc03G0007530 AT5G25140.1 cytochrome P450, family 71, subfamily B, polypeptide 13 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 13;(source:Araport11) Ipc03G0007540 AT1G74190.1 receptor like protein 15 0 receptor like protein 15;(source:Araport11) Ipc03G0007550 AT5G35200.2 0 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc03G0007560 AT2G10950.3 0 0 BSD domain-containing protein;(source:Araport11) Ipc03G0007570 AT5G25520.2 SPOC domain / Transcription elongation factor S-II protein 0 SPOC domain / Transcription elongation factor S-II protein;(source:Araport11) Ipc03G0007580 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0007590 AT3G22142.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0007600 AT2G10940.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc03G0007610 #N/A #N/A #N/A #N/A Ipc03G0007620 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc03G0007630 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc03G0007640 AT2G17905.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc03G0007650 AT1G80110.1 phloem protein 2-B11 0 phloem protein 2-B11;(source:Araport11) Ipc03G0007660 AT2G06050.3 oxophytodienoate-reductase 3 Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can restore the fertility of opr3 plants by inducing filament elongation and anther dehiscence. oxophytodienoate-reductase 3;(source:Araport11) Ipc03G0007670 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0007680 AT4G34340.1 TBP-associated factor 8 0 TBP-associated factor 8;(source:Araport11) Ipc03G0007690 AT1G80110.1 phloem protein 2-B11 0 phloem protein 2-B11;(source:Araport11) Ipc03G0007700 AT1G80110.1 phloem protein 2-B11 0 phloem protein 2-B11;(source:Araport11) Ipc03G0007710 AT1G80110.1 phloem protein 2-B11 0 phloem protein 2-B11;(source:Araport11) Ipc03G0007720 AT2G02360.1 phloem protein 2-B10 Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.Expression is induced by SA and pathogenic bacteria. phloem protein 2-B10;(source:Araport11) Ipc03G0007730 AT5G20250.4 Raffinose synthase family protein encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile. Raffinose synthase family protein;(source:Araport11) Ipc03G0007740 AT3G53270.9 0 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein;(source:Araport11) Ipc03G0007760 AT5G32440.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc03G0007750 AT1G05990.1 EF hand calcium-binding protein family 0 EF hand calcium-binding protein family;(source:Araport11) Ipc03G0007770 AT3G01300.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc03G0007780 AT5G02770.1 0 Encodes a conserved eukaryotic protein with homology to the human RNA binding protein CIP29 that localizes to the nucleus. Mutants accumulate more poly(A) mRNAs in the nucleus, likely resulting from reduced mRNA export activity. Protein MODIFIER OF SNC1 11;(source:Araport11) Ipc03G0007790 AT4G32272.1 Nucleotide/sugar transporter family protein Golgi-localized nucleotide sugar (UDP-GlcNAc) transporter that delivers an essential substrate for the maturation of N-glycans and the GIPC class of sphingolipids. Nucleotide/sugar transporter family protein;(source:Araport11) Ipc03G0007800 AT5G52580.3 0 0 RabGAP/TBC domain-containing protein;(source:Araport11) Ipc03G0007810 AT5G52600.1 myb domain protein 82 Encodes a nuclear-localized transcription activator that is a member of the R2R3 factor gene family. MYB82 and GL1 can form homodimers and heterodimers at R2R3-MYB domains. At least one of the two introns in MYB82 is essential to the protein?s trichome developmental function. myb domain protein 82;(source:Araport11) Ipc03G0007820 #N/A #N/A #N/A #N/A Ipc03G0007830 AT2G13290.2 beta-1,4-N-acetylglucosaminyltransferase family protein 0 beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc03G0007840 AT3G15880.4 0 0 WUS-interacting protein 2;(source:Araport11) Ipc03G0007850 AT2G44310.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc03G0007860 AT2G42160.1 zinc finger (ubiquitin-hydrolase) domain-containing protein Encodes a RING domain containing protein BRIZ1. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth. zinc finger (ubiquitin-hydrolase) domain-containing protein;(source:Araport11) Ipc03G0007870 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc03G0007880 AT4G36480.2 long-chain base1 Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion. long-chain base1;(source:Araport11) Ipc03G0007890 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0007900 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc03G0007910 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0007920 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc03G0007930 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0007940 AT3G33530.4 0 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0007950 AT3G24150.2 0 0 hypothetical protein;(source:Araport11) Ipc03G0007960 AT5G20230.1 blue-copper-binding protein Encodes a Al-stress-induced gene. Along with TCF, it promotes lignin biosynthesis in response to cold stress. The mRNA is cell-to-cell mobile. blue-copper-binding protein;(source:Araport11) Ipc03G0007970 AT2G26600.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc03G0007980 AT2G31600.5 0 0 INO80 complex subunit D-like protein;(source:Araport11) Ipc03G0007990 AT5G08300.1 Succinyl-CoA ligase, alpha subunit 0 Succinyl-CoA ligase, alpha subunit;(source:Araport11) Ipc03G0008000 AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein 0 SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc03G0008010 AT5G08240.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0008020 AT5G08310.2 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0008030 AT4G14700.1 origin recognition complex 1 Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator. origin recognition complex 1;(source:Araport11) Ipc03G0008040 AT2G26580.2 plant-specific transcription factor YABBY family protein 0 plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc03G0008050 AT5G35410.1 Protein kinase superfamily protein encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition Protein kinase superfamily protein;(source:Araport11) Ipc03G0008060 AT2G25490.1 EIN3-binding F box protein 1 Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile. EIN3-binding F box protein 1;(source:Araport11) Ipc03G0008070 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc03G0008080 AT1G45191.6 0 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc03G0008090 AT1G59780.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc03G0008100 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc03G0008110 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc03G0008120 AT1G15360.2 0 Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0024940 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0024950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0024960 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc10G0013490 AT1G68920.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0013480 AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc10G0013470 AT1G68940.1 Armadillo/beta-catenin-like repeat family protein 0 Armadillo/beta-catenin-like repeat family protein;(source:Araport11) Ipc10G0013460 AT3G30390.3 0 Encodes a putative amino acid transporter. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc10G0013450 AT1G13630.4 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0013440 AT2G14080.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013430 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013420 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013410 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013400 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013390 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013380 AT4G16950.2 Disease resistance protein (TIR-NBS-LRR class) family Contains a putative nucleotide binding site and leucine-rich repeats. Similar to the plant resistance genes N and L6, and to the toll and interleukin-1 receptors. Confers resistance to Peronospora parasitica.Redundant function together with SIKIC1 and 3 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2. Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013370 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013360 AT1G69120.1 K-box region and MADS-box transcription factor family protein Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc10G0013350 AT1G48175.4 0 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc10G0013340 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc10G0013330 AT1G69060.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc10G0013320 AT3G04680.3 0 Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression. CLP-similar protein 3;(source:Araport11) Ipc10G0013310 AT1G69040.2 ACT domain repeat 4 ACT-domain containing protein involved in feedback regulation of amino acid metabolism ACT domain repeat 4;(source:Araport11) Ipc10G0013300 AT2G03780.1 Translin family protein 0 Translin family protein;(source:Araport11) Ipc10G0013290 AT2G03810.7 0 0 18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11) Ipc10G0013280 AT4G25740.1 RNA binding Plectin/S10 domain-containing protein 0 RNA binding Plectin/S10 domain-containing protein;(source:Araport11) Ipc10G0013270 AT5G62020.1 heat shock transcription factor B2A member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile. heat shock transcription factor B2A;(source:Araport11) Ipc10G0013260 AT2G03890.1 phosphoinositide 4-kinase gamma 7 Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. The mRNA is cell-to-cell mobile. phosphoinositide 4-kinase gamma 7;(source:Araport11) Ipc10G0013250 AT1G13635.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc10G0013240 AT5G47580.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0013230 AT5G36930.4 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013220 AT4G00155.1 0 0 retrotransposon Gag;(source:Araport11) Ipc10G0013210 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013200 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013190 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc10G0013180 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc10G0013170 AT1G69240.1 methyl esterase 15 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein. methyl esterase 15;(source:Araport11) Ipc10G0013160 AT2G03670.1 cell division cycle 48B CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B cell division cycle 48B;(source:Araport11) Ipc10G0013150 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0013140 AT5G01210.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0013130 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc10G0013120 AT2G04540.1 Beta-ketoacyl synthase Encodes a mitochondrial beta-ketoacyl-ACP synthase. Beta-ketoacyl synthase;(source:Araport11) Ipc10G0013110 AT5G08420.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc10G0013100 AT5G48650.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain Negative regulator of defense response to Pseudomonas syringae pv. tomato through altered stomatal and apoplastic immunity. Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc10G0013090 AT1G13740.1 ABI five binding protein 2 Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent. ABI five binding protein 2;(source:Araport11) Ipc10G0013080 AT2G03630.1 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc10G0013070 AT1G69290.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0013060 AT2G03590.2 0 Encodes a member of a class of allantoin transporters. ureide permease 1;(source:Araport11) Ipc10G0013050 #N/A #N/A #N/A #N/A Ipc10G0013040 AT2G03510.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc10G0013030 AT1G26480.1 general regulatory factor 12 14-3-3 protein GF14iota (grf12) general regulatory factor 12;(source:Araport11) Ipc10G0013020 AT2G03480.2 QUASIMODO2 LIKE 2 Encodes QUASIMODO2 LIKE2 (QUL2), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. QUASIMODO2 LIKE 2;(source:Araport11) Ipc10G0013010 AT5G62165.5 AGAMOUS-like 42 Encodes a MADS box transcription factor. Expressed in quiescent center. Involved in floral transition. AGAMOUS-like 42;(source:Araport11) Ipc10G0013000 AT3G02090.1 Insulinase (Peptidase family M16) protein 0 Insulinase (Peptidase family M16) protein;(source:Araport11) Ipc10G0012990 AT1G26610.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc10G0012980 AT1G69310.4 0 Encodes WRKY57, a member of the WRKY Transcription Factor. Activation of WRKY57 confers drought tolerance. WRKY DNA-binding protein 57;(source:Araport11) Ipc10G0012970 AT1G13890.2 0 Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33. soluble N-ethylmaleimide-sensitive factor adaptor protein 30;(source:Araport11) Ipc10G0012960 AT1G69320.1 CLAVATA3/ESR-RELATED 10 Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. CLAVATA3/ESR-RELATED 10;(source:Araport11) Ipc10G0012950 AT5G61250.3 0 Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted. glucuronidase 1;(source:Araport11) Ipc10G0012940 AT1G69330.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0012930 AT2G03420.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0012920 AT1G69340.2 0 0 appr-1-p processing enzyme family protein;(source:Araport11) Ipc10G0012910 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc10G0012900 AT2G02103.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc10G0012890 AT2G03360.2 Glycosyltransferase family 61 protein 0 Glycosyltransferase family 61 protein;(source:Araport11) Ipc10G0012880 AT1G69380.1 Protein of unknown function (DUF155) Encodes a mitochondria-localized protein that is required for cell division in the root meristem. sporulation protein (DUF155);(source:Araport11) Ipc10G0012870 AT1G69390.1 homologue of bacterial MinE 1 Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery. homologue of bacterial MinE 1;(source:Araport11) Ipc10G0012860 AT1G69400.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0012850 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc10G0012840 AT2G03340.1 WRKY DNA-binding protein 3 Encodes WRKY DNA-binding protein 3 (WRKY3). WRKY DNA-binding protein 3;(source:Araport11) Ipc10G0012830 AT5G50220.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0012820 AT5G50220.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0012810 AT3G11810.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0012800 AT1G69430.1 0 0 Son of sevenless protein;(source:Araport11) Ipc10G0012790 AT1G26660.1 Prefoldin chaperone subunit family protein 0 Prefoldin chaperone subunit family protein;(source:Araport11) Ipc10G0012780 AT4G20325.1 0 0 ribonuclease H2 subunit B;(source:Araport11) Ipc10G0012770 AT1G69440.1 Argonaute family protein Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds. Argonaute family protein;(source:Araport11) Ipc10G0012760 AT1G29150.2 0 specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A.The mRNA is cell-to-cell mobile. non-ATPase subunit 9;(source:Araport11) Ipc10G0012750 AT1G13980.2 sec7 domain-containing protein Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions. BFA inhibits GNOM trafficking and BFA resistant lines are more resistant to cold stress. sec7 domain-containing protein;(source:Araport11) Ipc10G0012740 AT1G26670.1 Vesicle transport v-SNARE family protein member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles. Vesicle transport v-SNARE family protein;(source:Araport11) Ipc10G0012730 AT1G13990.1 0 0 plant/protein;(source:Araport11) Ipc10G0012720 AT1G14020.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc10G0012710 AT1G14060.1 GCK domain-containing protein 0 GCK domain-containing protein;(source:Araport11) Ipc10G0012700 AT5G15310.2 myb domain protein 16 Member of the R2R3 factor gene family. myb domain protein 16;(source:Araport11) Ipc10G0012690 AT5G15310.2 myb domain protein 16 Member of the R2R3 factor gene family. myb domain protein 16;(source:Araport11) Ipc10G0012680 AT5G15310.1 myb domain protein 16 Member of the R2R3 factor gene family. myb domain protein 16;(source:Araport11) Ipc10G0012670 AT1G69490.1 NAC-like, activated by AP3/PI Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. The mRNA is cell-to-cell mobile. NAC-like, activated by AP3/PI;(source:Araport11) Ipc10G0012660 AT1G69500.1 cytochrome P450, family 704, subfamily B, polypeptide 1 Encodes a cytochrome P450, designated CYP704B1. Expressed in the developing anthers. Essential for pollen exine development. Mutations in CYP704B1 result in impaired pollen walls that lack a normal exine layer and exhibit a characteristic striped surface, termed zebra phenotype. Heterologous expression of CYP704B1 in yeast cells demonstrated that it catalyzes omega-hydroxylation of long-chain fatty acids, implicating these molecules in sporopollenin synthesis. cytochrome P450, family 704, subfamily B, polypeptide 1;(source:Araport11) Ipc10G0012650 AT1G14160.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0012640 AT5G64130.1 cAMP-regulated phosphoprotein 19-related protein 0 cAMP-regulated phosphoprotein 19-related protein;(source:Araport11) Ipc10G0012630 AT1G69523.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc10G0012620 AT1G14180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0012610 AT1G26770.1 expansin A10 Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A10;(source:Araport11) Ipc10G0012600 AT2G03050.2 0 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc10G0012590 AT1G69560.1 myb domain protein 105 Encodes LOF2 (LATERAL ORGAN FUSION2), a MYB-domain transcription factor expressed in organ boundaries. Functions in boundary specification, meristem initiation and maintenance, and organ patterning. Also see LOF1 (At1g26780). myb domain protein 105;(source:Araport11) Ipc10G0012580 AT5G39670.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc10G0012570 AT1G69580.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc10G0012560 AT1G09157.1 Protein of unknown function (DUF679) 0 transmembrane protein, putative (DUF679);(source:Araport11) Ipc10G0012550 AT2G02990.1 ribonuclease 1 Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. ribonuclease 1;(source:Araport11) Ipc10G0012540 AT2G02970.1 GDA1/CD39 nucleoside phosphatase family protein Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence. GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11) Ipc10G0012530 AT1G26880.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc10G0012520 AT1G26870.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein NAC-domain protein. Expressed in root cap stem cells, where it promotes periclinal root cap-forming divisions. Involved in a regulatory feedback loop with SMB. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc10G0012510 AT1G14270.1 CAAX amino terminal protease family protein 0 CAAX amino terminal protease family protein;(source:Araport11) Ipc10G0012500 AT1G26850.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc10G0012490 AT1G14290.1 sphingoid base hydroxylase 2 Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. sphingoid base hydroxylase 2;(source:Araport11) Ipc10G0012480 AT1G14310.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc10G0012470 AT1G26830.1 cullin 3 Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3;(source:Araport11) Ipc10G0012460 AT1G69700.1 HVA22 homologue C Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. The mRNA is cell-to-cell mobile. HVA22 homologue C;(source:Araport11) Ipc10G0012450 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc10G0012440 AT2G02870.3 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc10G0012430 AT1G26940.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc10G0012420 AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc10G0012410 AT2G02860.1 sucrose transporter 2 encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding. sucrose transporter 2;(source:Araport11) Ipc10G0012400 AT1G14345.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc10G0012390 AT1G14350.2 Duplicated homeodomain-like superfamily protein Encodes a putative MYB transcription factor involved in stomata development, loss of FLP activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants with MYB88. Its transcript levels change after inducing MUTE expression in a mute background. Also regulates female reproductive development. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc10G0012380 AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein Leucine rich repeat protein that also contains an adenylate cyclase catalytic core motif. Capable of converting ATP to cAMP in vitro. Mutants show increased susceptibility to fungal pathogens. LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc10G0012370 AT2G02800.2 protein kinase 2B Encodes protein kinase APK2b. protein kinase 2B;(source:Araport11) Ipc10G0012360 AT3G08850.1 HEAT repeat ;WD domain, G-beta repeat protein protein Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. Regulatory-associated protein of TOR 1;(source:Araport11) Ipc10G0012350 AT2G02750.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0012340 AT5G20220.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0012330 AT3G10430.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0012320 #N/A #N/A #N/A #N/A Ipc10G0012310 AT3G20030.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc10G0012300 AT2G02990.1 ribonuclease 1 Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. ribonuclease 1;(source:Araport11) Ipc10G0012290 AT1G69830.1 alpha-amylase-like 3 Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. alpha-amylase-like 3;(source:Araport11) Ipc10G0012280 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc10G0012270 AT5G15080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0012260 AT3G17900.2 0 0 unknown protein;(source:TAIR10) Ipc10G0012250 AT1G14430.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc10G0012240 AT1G69850.1 nitrate transporter 1:2 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems. nitrate transporter 1:2;(source:Araport11) Ipc10G0012230 AT3G01470.1 homeobox 1 Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33). homeobox 1;(source:Araport11) Ipc10G0012220 AT1G27050.1 0 Encodes a protein with a RNA recognition motif. Previously annotated as ATHB54, a homeodomain leucine zipper (HD-Zip) family protein. In the TAIR10 genome release (2010), this locus was split into two loci: AT1G27045 (containing homeodomain and leucine zipper domains) and AT1G27050 (containing a RNA recognition motif). AT1G27045 is now named ATHB54. Note that Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein). homeobox leucine zipper protein;(source:Araport11) Ipc10G0012210 AT1G69870.1 nitrate transporter 1.7 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile. nitrate transporter 1.7;(source:Araport11) Ipc10G0012200 #N/A #N/A #N/A #N/A Ipc10G0012190 AT1G69870.1 nitrate transporter 1.7 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile. nitrate transporter 1.7;(source:Araport11) Ipc10G0012180 AT2G38280.2 AMP deaminase, putative / myoadenylate deaminase, putative Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage. AMP deaminase, putative / myoadenylate deaminase;(source:Araport11) Ipc10G0012170 AT5G39950.1 thioredoxin 2 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin 2;(source:Araport11) Ipc10G0012160 AT1G10350.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc10G0012150 AT1G10360.1 glutathione S-transferase TAU 18 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 18;(source:Araport11) Ipc10G0012140 AT1G05670.3 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc10G0012130 AT4G22000.1 0 0 tyrosine sulfotransferase-like protein;(source:Araport11) Ipc10G0012120 AT1G10380.1 Putative membrane lipoprotein 0 Putative membrane lipoprotein;(source:Araport11) Ipc10G0012110 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0012100 AT5G62620.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced seed coat mucilage and accelerated leaf senescence. Galactosyltransferase family protein;(source:Araport11) Ipc10G0012090 AT2G38110.1 glycerol-3-phosphate acyltransferase 6 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly. glycerol-3-phosphate acyltransferase 6;(source:Araport11) Ipc10G0012080 AT1G59650.1 Protein of unknown function (DUF1336) Encodes CW14. CW14 protein (DUF1336);(source:Araport11) Ipc10G0012070 AT1G59640.1 BIG PETAL P A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. transcription factor BIG PETAL P (BPE);(source:Araport11) Ipc10G0012060 AT1G59820.1 aminophospholipid ATPase 3 Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 3;(source:Araport11) Ipc10G0012050 AT5G13050.1 5-formyltetrahydrofolate cycloligase 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate 5-formyltetrahydrofolate cycloligase;(source:Araport11) Ipc10G0012040 AT1G10430.2 0 Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. It regulates the activation of ADF/cofilin, which, in turn, regulates actin cytoskeleton remodeling and is involved in phot2-mediated chloroplast avoidance movements. protein phosphatase 2A-2;(source:Araport11) Ipc10G0012030 AT1G27190.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0012020 AT1G59890.2 SIN3-like 5 0 SIN3-like 5;(source:Araport11) Ipc10G0012010 AT1G59900.1 pyruvate dehydrogenase complex E1 alpha subunit encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC) The mRNA is cell-to-cell mobile. pyruvate dehydrogenase complex E1 alpha subunit;(source:Araport11) Ipc10G0012000 AT1G70090.2 glucosyl transferase family 8 Encodes a protein with putative galacturonosyltransferase activity. glucosyl transferase family 8;(source:Araport11) Ipc10G0011990 AT1G70140.1 formin 8 Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton. formin 8;(source:Araport11) Ipc10G0011980 AT1G59940.2 0 Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner. response regulator 3;(source:Araport11) Ipc10G0011970 AT1G70160.1 0 0 zinc finger MYND domain protein;(source:Araport11) Ipc10G0011960 AT3G48180.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc10G0011950 AT1G67030.1 zinc finger protein 6 Encodes a novel C2H2 zinc finger protein containing only a single zinc finger which plays a key role in regulating trichome development by integrating GA and cytokinin signaling. The mRNA is cell-to-cell mobile. zinc finger protein 6;(source:Araport11) Ipc10G0011940 AT1G24110.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc10G0011930 AT1G51760.1 peptidase M20/M25/M40 family protein encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile. peptidase M20/M25/M40 family protein;(source:Araport11) Ipc10G0011920 AT5G14920.1 Gibberellin-regulated family protein Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation. Gibberellin-regulated family protein;(source:Araport11) Ipc10G0011910 AT1G59990.2 0 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc10G0011900 AT1G10522.2 0 Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus. Serine/Threonine-kinase;(source:Araport11) Ipc10G0011890 AT1G24095.1 Putative thiol-disulphide oxidoreductase DCC 0 Putative thiol-disulfide oxidoreductase DCC;(source:Araport11) Ipc10G0011880 AT1G24090.1 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc10G0011860 AT3G02860.2 zinc ion binding Encodes a C2H2 zinc finger protein that is localized to the nucleus and is translocated to the cytoplasm in response to ABA or oxidative stress. It functions as a positive regulator countering ABA to break seed dormancy and maintain ROS homeostasis in response to ABA and oxidative stress. zinc ion binding protein;(source:Araport11) Ipc10G0011870 AT3G02860.2 zinc ion binding Encodes a C2H2 zinc finger protein that is localized to the nucleus and is translocated to the cytoplasm in response to ABA or oxidative stress. It functions as a positive regulator countering ABA to break seed dormancy and maintain ROS homeostasis in response to ABA and oxidative stress. zinc ion binding protein;(source:Araport11) Ipc10G0011850 AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a RNA-Binding Protein RBD1. Promotes chilling tolerance through 23S rRNA processing. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0011840 AT1G70210.1 CYCLIN D1;1 Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination. CYCLIN D1;(source:Araport11) Ipc10G0011830 AT1G10522.2 0 Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus. Serine/Threonine-kinase;(source:Araport11) Ipc10G0011820 AT1G60010.1 0 0 D-ribose-binding periplasmic protein;(source:Araport11) Ipc01G0025060 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0025050 AT2G01900.1 DNAse I-like superfamily protein Encodes an inositol polyphosphate phosphatidylinositol 5-phosphatase that is expressed in roots and is involved in mediating salt tolerance through endocytosis. DNAse I-like superfamily protein;(source:Araport11) Ipc01G0025040 AT1G78530.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0025030 AT1G18335.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc01G0025020 AT5G50870.1 ubiquitin-conjugating enzyme 27 0 ubiquitin-conjugating enzyme 27;(source:Araport11) Ipc01G0025010 AT5G41110.2 0 0 meiosis chromosome segregation family protein;(source:Araport11) Ipc01G0025000 AT3G14620.1 cytochrome P450, family 72, subfamily A, polypeptide 8 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 8;(source:Araport11) Ipc01G0024990 AT4G25040.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc01G0024980 AT1G71691.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0024970 AT3G12345.1 0 0 FKBP-type peptidyl-prolyl cis-trans isomerase;(source:Araport11) Ipc01G0024960 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc01G0024950 AT5G51140.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc01G0024940 AT5G50900.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0024930 #N/A #N/A #N/A #N/A Ipc01G0024920 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc01G0024910 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0024900 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0024890 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc01G0024880 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0020920 AT1G79250.4 0 0 AGC kinase 1.7;(source:Araport11) Ipc02G0020930 AT1G79280.1 nuclear pore anchor Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development. nuclear pore anchor;(source:Araport11) Ipc02G0020940 AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein Encodes the Arabidopsis thaliana orthologue of metazoan Strawberry notch, a highly conserved co-activator of the developmental regulator Notch. It mediates stress-induced chromatin memory by modulating nucleosome occupancy by interacting with chromatin remodeling proteins of the ISWI and SWI/SNF classes. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc02G0020950 AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein 0 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein;(source:Araport11) Ipc02G0020960 AT1G54310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0020970 AT1G28710.4 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc02G0020980 AT3G12750.1 zinc transporter 1 precursor A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. zinc transporter 1 precursor;(source:Araport11) Ipc02G0020990 AT1G16330.1 cyclin b3;1 core cell cycle genes cyclin b3;(source:Araport11) Ipc02G0021000 AT1G79510.2 Uncharacterized conserved protein (DUF2358) 0 hypothetical protein (DUF2358);(source:Araport11) Ipc02G0021010 AT1G16310.1 Cation efflux family protein Cation efflux family protein which affects ABA-JA crosstalk and susceptibility to Mamestra brassicae herbivory. Cation efflux family protein;(source:Araport11) Ipc02G0021020 AT2G34890.1 CTP synthase family protein Cytidine triphosphate synthase. CTP synthase family protein;(source:Araport11) Ipc02G0021030 AT3G12760.1 0 0 defective in cullin neddylation protein;(source:Araport11) Ipc02G0021040 AT1G16300.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 2 Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots. glyceraldehyde-3-phosphate dehydrogenase of plastid 2;(source:Araport11) Ipc02G0021050 AT1G16290.2 0 0 transglycosylase;(source:Araport11) Ipc02G0021060 AT1G70630.3 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc02G0021070 AT1G79570.2 0 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc02G0021080 AT3G12800.1 short-chain dehydrogenase-reductase B 0 short-chain dehydrogenase-reductase B;(source:Araport11) Ipc02G0021090 AT1G79560.1 FTSH protease 12 Encodes an FtsH protease that is localized to the chloroplast and is part of a membrane localized translocation motor complex .Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). Mutations in this locus result in embryo lethality. FTSH protease 12;(source:Araport11) Ipc02G0021100 AT1G56190.1 Phosphoglycerate kinase family protein One of a pair of plastid localized phosphoglycerate kinases involved in galactolipid biosynthesis. Functions redundantly with AT3g12780 (PGK1) in the chloroplast in the biosynthesis of thylakoid membrane galactolipids. Double mutants are photosynthetically incompetent, plants are albino and seedling lethal. Phosphoglycerate kinase family protein;(source:Araport11) Ipc02G0021110 AT1G79550.2 phosphoglycerate kinase Encodes cytosolic phosphoglycerate kinase (PGK3). Expression studies in PGK mutants showed that PGK1 and PGK3 were down-regulated in pgk3.2 and pgk1.1, respectively. These results indicate that the down-regulation of photosynthetic activity could be a plant strategy when glycolysis is impaired to achieve metabolic adjustment and optimize growth. phosphoglycerate kinase;(source:Araport11) Ipc02G0021120 AT1G79230.1 mercaptopyruvate sulfurtransferase 1 encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification. mercaptopyruvate sulfurtransferase 1;(source:Araport11) Ipc02G0021130 AT1G79190.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0021140 AT1G31340.1 related to ubiquitin 1 Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response. related to ubiquitin 1;(source:Araport11) Ipc02G0021150 AT1G79160.1 0 0 filamentous hemagglutinin transporter;(source:Araport11) Ipc02G0021160 AT3G12830.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc02G0021170 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc02G0021180 AT2G23180.1 cytochrome P450, family 96, subfamily A, polypeptide 1 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 1;(source:Araport11) Ipc02G0021190 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc02G0021200 AT1G16520.1 0 NAI1 interacting protein, involved in ER body and vesicle formation. interactor of constitutive active ROPs protein;(source:Araport11) Ipc02G0021210 AT3G12890.1 activator of spomin::LUC2 Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes. activator of spomin::LUC2;(source:Araport11) Ipc02G0021220 AT1G16540.1 molybdenum cofactor sulfurase (LOS5) (ABA3) Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts. molybdenum cofactor sulfurase (LOS5) (ABA3);(source:Araport11) Ipc02G0021230 AT2G43000.1 NAC domain containing protein 42 Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2). Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses. NAC domain containing protein 42;(source:Araport11) Ipc02G0021240 AT1G16560.9 0 0 Per1-like family protein;(source:Araport11) Ipc02G0021250 AT5G09370.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0021260 AT1G16590.1 DNA-binding HORMA family protein putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). DNA-binding HORMA family protein;(source:Araport11) Ipc02G0021270 AT3G12920.1 SBP (S-ribonuclease binding protein) family protein Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea. SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc02G0021280 AT3G12940.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0021290 AT1G79090.3 0 Encodes a component of the mRNA decapping machinery that is found in complexes with and is phosphorylated by MPK4. The protein can be found in P-bodies after treatment with PAMPs. Pat1 mutants exhibit dwarfism and de-repressed immunity dependent on the immune receptor SUMM2. The pat1 constitutive defense phenotype is suppressed by summ2 such that pat1 summ2 mutants display a wild-type phenotype in response to biotrophic and necrotrophic pathogens. topoisomerase II-associated protein;(source:Araport11) Ipc02G0021300 AT1G79070.2 0 0 SNARE-associated protein-like protein;(source:Araport11) Ipc02G0021310 AT1G56020.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc02G0021320 AT1G79050.1 recA DNA recombination family protein 0 recA DNA recombination family protein;(source:Araport11) Ipc02G0021330 AT1G79030.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc02G0021340 AT5G64150.1 RNA methyltransferase family protein 0 RNA methyltransferase family protein;(source:Araport11) Ipc02G0021350 AT1G16220.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0021360 AT1G55580.1 GRAS family transcription factor Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching. GRAS family transcription factor;(source:Araport11) Ipc02G0021370 AT5G56280.1 COP9 signalosome subunit 6A one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation. COP9 signalosome subunit 6A;(source:Araport11) Ipc02G0021380 AT1G55590.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc02G0021390 AT5G56270.1 WRKY DNA-binding protein 2 Encodes WRKY transcription factor 2, a zinc-finger protein. In wrky2 mutants, egg cells polarize normally but zygotes fail to reestablish polar organelle positioning from a transient symmetric state, resulting in equal cell division and distorted embryo development. WRKY DNA-binding protein 2;(source:Araport11) Ipc02G0021400 AT1G55620.2 chloride channel F Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen. chloride channel F;(source:Araport11) Ipc02G0021410 AT4G26450.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0016310 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc15G0016300 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0016290 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc15G0016280 AT2G17890.1 calcium-dependent protein kinase 16 Encodes a member of Calcium Dependent Protein Kinase. Protein is N-myristoylated. Localizes to the plasma membrane. Localizes to the chloroplast when the myristoylation motif is mutated. calcium-dependent protein kinase 16;(source:Araport11) Ipc15G0016270 AT1G51990.1 O-methyltransferase family protein 0 O-methyltransferase family protein;(source:Araport11) Ipc15G0016260 AT2G11890.2 adenylate cyclases Encodes a tripolyphosphatase that is involved in root development. adenylate cyclase;(source:Araport11) Ipc15G0016250 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc15G0016240 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc05G0025020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0025030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0025040 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0025050 AT2G35540.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc05G0025060 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0025070 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0025080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0025090 AT5G46980.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc05G0025100 AT2G45380.1 0 0 myeloid leukemia factor;(source:Araport11) Ipc05G0025110 AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0025120 AT1G76060.1 LYR family of Fe/S cluster biogenesis protein mutant has Embryo defect LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc05G0025130 AT3G03800.2 0 member of SYP13 Gene Family syntaxin of plants 131;(source:Araport11) Ipc05G0025140 AT4G38040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc05G0025150 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc05G0025160 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc05G0025170 AT3G58470.1 nucleic acid binding;methyltransferases 0 nucleic acid binding / methyltransferase;(source:Araport11) Ipc05G0025180 #N/A #N/A #N/A #N/A Ipc05G0025190 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0025200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0028070 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028060 AT5G19260.1 Protein of unknown function (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc01G0028050 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0028040 AT5G19250.1 Glycoprotein membrane precursor GPI-anchored 0 Glycoprotein membrane precursor GPI-anchored;(source:Araport11) Ipc02G0005760 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc14G0013170 AT2G32235.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0013160 AT1G15510.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0013150 AT4G13710.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0013130 AT4G19440.4 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0013140 AT1G04140.2 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc14G0013120 AT3G24040.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc14G0013110 AT3G24010.1 RING/FYVE/PHD zinc finger superfamily protein ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc14G0013100 AT5G24520.4 0 Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes. Auxin and ethylene responsiveness of TTG1 transcription is lost in myb12 mutants. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc14G0013090 AT3G04310.2 0 0 transmembrane protein;(source:Araport11) Ipc14G0013080 AT3G16840.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc14G0013070 AT2G33255.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc14G0013060 AT3G24310.1 myb domain protein 305 snapdragon myb protein 305 homolog (myb) myb domain protein 305;(source:Araport11) Ipc14G0013050 AT1G06670.1 nuclear DEIH-boxhelicase nuclear DEIH-box helicase (NIH) encoding a putative RNA and/or DNA helicase homologous to a group of nucleic acid helicases from the DEAD/H family with nuclear DEIH-box helicase (NIH) distinct N- and C-terminal regions that differ from animal DEIH proteins The mRNA is cell-to-cell mobile. nuclear DEIH-boxhelicase;(source:Araport11) Ipc14G0013040 AT4G13460.2 SU(VAR)3-9 homolog 9 Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. SU(VAR)3-9 homolog 9;(source:Araport11) Ipc07G0001580 AT4G24270.1 EMBRYO DEFECTIVE 140 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 140;(source:Araport11) Ipc07G0001590 AT4G24270.4 0 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 140;(source:Araport11) Ipc07G0001600 AT1G14440.2 homeobox protein 31 0 homeobox protein 31;(source:Araport11) Ipc07G0001610 AT5G49820.1 Protein of unknown function, DUF647 0 root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11) Ipc07G0001620 AT1G52080.2 0 0 actin binding protein family;(source:Araport11) Ipc07G0001630 AT2G02560.2 cullin-associated and neddylation dissociated Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1. The mRNA is cell-to-cell mobile. cullin-associated and neddylation dissociated;(source:Araport11) Ipc07G0001640 AT5G47530.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc07G0001650 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc07G0001660 AT1G31460.1 0 0 vitellogenin-2 protein;(source:Araport11) Ipc07G0001670 AT4G16490.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc07G0001680 AT4G16480.3 0 Encodes a high affinity H+:myo-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of myo-inositol.The mRNA is cell-to-cell mobile. inositol transporter 4;(source:Araport11) Ipc07G0001690 AT1G55900.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein component of a translocase in the mitochondrial inner membrane Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc07G0001700 AT2G35740.1 nositol transporter 3 0 nositol transporter 3;(source:Araport11) Ipc07G0001710 AT4G16470.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0001720 AT3G07800.1 Thymidine kinase Encodes a thymidine kinase that salvages DNA precursors. Thymidine kinase;(source:Araport11) Ipc07G0001730 AT5G47520.1 RAB GTPase homolog A5A 0 RAB GTPase homolog A5A;(source:Araport11) Ipc06G0017340 AT4G22620.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc06G0017320 AT2G27230.2 transcription factor-related Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots. transcription factor-like protein;(source:Araport11) Ipc06G0017310 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc06G0017300 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc05G0024580 AT2G28330.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0024590 AT3G54200.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc05G0024600 AT5G01020.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc05G0024620 AT1G36950.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0024610 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0024630 #N/A #N/A #N/A #N/A Ipc05G0024640 AT5G12430.1 Heat shock protein DnaJ with tetratricopeptide repeat Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc01G0026630 AT5G18810.2 0 encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SC35-like splicing factor 28;(source:Araport11) Ipc01G0026640 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc01G0026650 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0026660 AT4G15890.1 binding CAP-3D is a subunit of condensin. It a target of MMD1 regulation and also involved in meiotic chromosome condensation. Mutants have reduced fertility. Required for the correct spatial relationship between centromeres and rDNA arrays. binding protein;(source:Araport11) Ipc01G0026670 AT4G15890.1 binding CAP-3D is a subunit of condensin. It a target of MMD1 regulation and also involved in meiotic chromosome condensation. Mutants have reduced fertility. Required for the correct spatial relationship between centromeres and rDNA arrays. binding protein;(source:Araport11) Ipc01G0026680 AT4G15890.1 binding CAP-3D is a subunit of condensin. It a target of MMD1 regulation and also involved in meiotic chromosome condensation. Mutants have reduced fertility. Required for the correct spatial relationship between centromeres and rDNA arrays. binding protein;(source:Araport11) Ipc01G0026690 AT3G16640.1 translationally controlled tumor protein Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. translationally controlled tumor protein;(source:Araport11) Ipc01G0026700 AT3G13090.1 multidrug resistance-associated protein 8 member of MRP subfamily multidrug resistance-associated protein 8;(source:Araport11) Ipc01G0026710 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0026720 AT5G66990.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc01G0026730 AT2G47800.1 multidrug resistance-associated protein 4 Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. The mRNA is cell-to-cell mobile. multidrug resistance-associated protein 4;(source:Araport11) Ipc01G0026740 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016270 AT5G59510.1 ROTUNDIFOLIA like 5 0 ROTUNDIFOLIA like 5;(source:Araport11) Ipc10G0016260 AT4G24480.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0016250 AT5G60020.2 0 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc10G0016240 AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes STC8 (salt tolerant callus 8)/bHLH106 (basic helix-loop-helix transcription factor bHLH106). Knockout lines are more sensitive to NaCl, KCl, LiCl, ABA, and low temperatures than the wild-type. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0016230 AT2G29970.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. The mRNA is cell-to-cell mobile. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0016220 AT2G29190.2 pumilio 2 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. pumilio 2;(source:Araport11) Ipc10G0016210 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc10G0016200 AT3G46640.3 Homeodomain-like superfamily protein Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. The mRNA is cell-to-cell mobile. Homeodomain-like superfamily protein;(source:Araport11) Ipc10G0016190 AT5G59610.5 0 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc10G0016180 AT5G59250.1 Major facilitator superfamily protein Encodes a chloroplast localized H+/glucose antiporter. Major facilitator superfamily protein;(source:Araport11) Ipc10G0016170 AT1G65630.1 DegP protease 3 Encodes a putative DegP protease. DegP protease 3;(source:Araport11) Ipc10G0016160 AT1G07473.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016150 AT1G07470.2 0 0 Transcription factor IIA, alpha/beta subunit;(source:Araport11) Ipc10G0016140 AT1G23780.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0016130 AT5G12460.1 Protein of unknown function (DUF604) 0 fringe-like protein (DUF604);(source:Araport11) Ipc10G0016120 AT5G61140.1 U5 small nuclear ribonucleoprotein helicase Encodes a predicted protein with 30% identity with MER3/RCK. Similar to yast Brr2p DEAD/DExH box ATP-dependent RNA helicase. U5 small nuclear ribonucleoprotein helicase;(source:Araport11) Ipc10G0016110 AT2G29260.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0016100 AT2G29380.1 highly ABA-induced PP2C gene 3 0 highly ABA-induced PP2C protein 3;(source:Araport11) Ipc10G0016090 AT1G07420.1 sterol 4-alpha-methyl-oxidase 2-1 Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA. The sterol 4alpha-methyl oxidase2 family proteins SMO2-1 and SMO2-2 function partially through effects on auxin accumulation, auxin response and PIN1 expression to regulate embryogenesis in Arabidopsis. sterol 4-alpha-methyl-oxidase 2-1;(source:Araport11) Ipc10G0016080 AT4G30030.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0016070 AT2G39840.1 type one serine/threonine protein phosphatase 4 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. The mRNA is cell-to-cell mobile. type one serine/threonine protein phosphatase 4;(source:Araport11) Ipc10G0016060 AT1G07410.1 RAB GTPase homolog A2B 0 RAB GTPase homolog A2B;(source:Araport11) Ipc10G0016050 AT3G25730.1 ethylene response DNA binding factor 3 0 ethylene response DNA binding factor 3;(source:Araport11) Ipc10G0016040 AT5G59050.1 0 0 G patch domain protein;(source:Araport11) Ipc10G0016030 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc10G0016020 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc10G0016010 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc10G0016000 AT1G07570.5 0 Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues Protein kinase superfamily protein;(source:Araport11) Ipc10G0015990 AT3G55440.1 triosephosphate isomerase Encodes triosephosphate isomerase. triosephosphate isomerase;(source:Araport11) Ipc10G0015980 AT2G28900.1 outer plastid envelope protein 16-1 Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment. outer plastid envelope protein 16-1;(source:Araport11) Ipc10G0015970 AT3G09390.2 0 metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage metallothionein 2A;(source:Araport11) Ipc10G0015960 AT5G57290.2 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc10G0015950 AT5G41220.2 0 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 3;(source:Araport11) Ipc10G0015940 AT1G07615.1 GTP-binding protein Obg/CgtA 0 GTP-binding protein Obg/CgtA;(source:Araport11) Ipc10G0015930 AT5G28350.2 Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 0 Quinoprotein amine dehydrogenase, beta chain-like;(source:Araport11) Ipc10G0015910 AT5G59370.2 actin 4 Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen. actin 4;(source:Araport11) Ipc10G0015920 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc10G0015900 AT5G59370.2 actin 4 Encodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen. actin 4;(source:Araport11) Ipc10G0015890 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc10G0015880 AT2G31970.1 DNA repair-recombination protein (RAD50) Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1. DNA repair-recombination protein (RAD50);(source:Araport11) Ipc10G0015870 AT3G22170.2 far-red elongated hypocotyls 3 A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. far-red elongated hypocotyls 3;(source:Araport11) Ipc10G0015860 #N/A #N/A #N/A #N/A Ipc10G0015850 AT1G03290.4 0 0 ELKS/Rab6-interacting/CAST family protein;(source:Araport11) Ipc10G0015840 AT3G46510.1 plant U-box 13 Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2. plant U-box 13;(source:Araport11) Ipc10G0015830 AT5G02500.1 heat shock cognate protein 70-1 encodes a member of heat shock protein 70 family. heat shock cognate protein 70-1;(source:Araport11) Ipc10G0015820 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc10G0015810 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc10G0015800 AT5G59960.1 0 0 K-stimulated pyrophosphate-energized sodium pump protein;(source:Araport11) Ipc10G0015790 AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0015780 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0015770 AT5G02560.1 histone H2A 12 Encodes HTA12, a histone H2A protein. histone H2A 12;(source:Araport11) Ipc10G0015760 AT3G43520.1 Transmembrane proteins 14C 0 Transmembrane proteins 14C;(source:Araport11) Ipc10G0015750 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0015740 AT5G47890.1 NADH-ubiquinone oxidoreductase B8 subunit, putative 0 NADH-ubiquinone oxidoreductase B8 subunit;(source:Araport11) Ipc10G0015730 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc10G0015720 AT3G45980.1 Histone superfamily protein Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. Histone superfamily protein;(source:Araport11) Ipc10G0015710 AT3G23600.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0015700 AT5G59910.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc10G0015690 AT2G37430.1 C2H2 and C2HC zinc fingers superfamily protein Encodes a member of the zinc finger family of transcriptional regulators. It is expressed in many root tips, primary roots, cotyledons and hypocotyl. The protein is localized to the nucleus. Overexpression of ZAT11 causes increased root growth and increased sensitivity to nickel ions. The mRNA is cell-to-cell mobile. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc10G0015680 AT3G53600.1 C2H2-type zinc finger family protein Nuclear C2H2 zinc finger protein.Expression is induced by cold, osmotic, salt, and drought stress. Over expression confers some drought tolerance whereas mutants display some drought sensitivity. C2H2-type zinc finger family protein;(source:Araport11) Ipc10G0015670 AT5G59800.1 methyl-CPG-binding domain 7 Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing. methyl-CPG-binding domain 7;(source:Araport11) Ipc10G0015660 AT3G46110.2 Domain of unknown function (DUF966) DUF966 domain containing protein, expressed during embryogenesis. UPSTREAM OF FLC-like protein (DUF966);(source:Araport11) Ipc10G0015650 AT3G50910.1 0 0 netrin receptor DCC;(source:Araport11) Ipc10G0015640 AT5G59780.2 myb domain protein 59 Encodes a putative transcription factor (MYB59). In roots it is involved in K+/NO3- transport and expression of the NPF7.3 transporter. myb domain protein 59;(source:Araport11) Ipc10G0015630 AT1G61490.7 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc10G0015620 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0015610 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc10G0015600 #N/A #N/A #N/A #N/A Ipc10G0015580 AT5G59750.1 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II 0 monofunctional riboflavin biosynthesis protein RIBA 3;(source:Araport11) Ipc10G0015590 AT2G28690.1 Protein of unknown function (DUF1635) 0 TOX high mobility group box protein, putative (DUF1635);(source:Araport11) Ipc10G0015570 AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc10G0015560 AT2G13980.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0015550 AT2G28680.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc10G0015540 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0015530 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc10G0015520 AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0015510 AT1G07730.2 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc10G0015500 AT2G43280.1 Far-red impaired responsive (FAR1) family protein Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. Far-red impaired responsive (FAR1) family protein;(source:Araport11) Ipc10G0015490 AT2G37390.1 Chloroplast-targeted copper chaperone protein 0 Chloroplast-targeted copper chaperone protein;(source:Araport11) Ipc10G0015480 AT2G39390.1 Ribosomal L29 family protein 0 Ribosomal L29 family protein;(source:Araport11) Ipc10G0015470 AT5G59730.2 exocyst subunit exo70 family protein H7 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. The mRNA is cell-to-cell mobile. exocyst subunit exo70 family protein H7;(source:Araport11) Ipc10G0015460 AT5G59730.2 exocyst subunit exo70 family protein H7 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. The mRNA is cell-to-cell mobile. exocyst subunit exo70 family protein H7;(source:Araport11) Ipc10G0015450 AT2G39380.1 exocyst subunit exo70 family protein H2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H2;(source:Araport11) Ipc08G0010120 AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain 0 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc08G0010130 AT5G48670.1 AGAMOUS-like 80 AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80;(source:Araport11) Ipc08G0010140 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc08G0010150 AT5G44320.1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11) Ipc08G0010160 AT2G46310.1 cytokinin response factor 5 CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves. cytokinin response factor 5;(source:Araport11) Ipc08G0010170 AT3G03920.1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein;(source:Araport11) Ipc08G0010180 AT3G16720.1 TOXICOS EN LEVADURA 2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile. TOXICOS EN LEVADURA 2;(source:Araport11) Ipc08G0010190 AT1G73650.2 Protein of unknown function (DUF1295) 0 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11) Ipc08G0010200 AT1G79640.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0010210 AT3G58950.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc08G0010220 AT1G13570.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc08G0010230 AT4G01860.2 Transducin family protein / WD-40 repeat family protein 0 Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0010240 AT5G49030.3 tRNA synthetase class I (I, L, M and V) family protein 0 tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11) Ipc08G0010250 #N/A #N/A #N/A #N/A Ipc08G0010260 AT4G13750.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc08G0010270 AT5G46295.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0010280 #N/A #N/A #N/A #N/A Ipc08G0010290 AT1G27990.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0010300 AT4G27950.1 cytokinin response factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin. cytokinin response factor 4;(source:Araport11) Ipc08G0010310 AT2G43710.2 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc08G0010320 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc08G0010330 AT2G24670.1 Domain of unknown function (DUF313) 0 B3 domain protein (DUF313);(source:Araport11) Ipc08G0010340 AT1G09270.2 importin alpha isoform 4 Protein interacts with Agrobacterium proteins VirD2 and VirE2. importin alpha isoform 4;(source:Araport11) Ipc08G0010350 AT1G56580.1 Protein of unknown function, DUF538 Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number. plant/protein (Protein of unknown function, DUF538);(source:Araport11) Ipc08G0010360 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0010380 AT1G56570.2 0 Encodes a mitochondria-localized pentatricopeptide repeat protein PGN. Functions in defense against necrotrophic fungi and abiotic stress tolerance. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0010370 AT5G53045.1 0 0 transcription factor;(source:Araport11) Ipc08G0010390 AT5G02850.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0010400 AT1G56590.1 Clathrin adaptor complexes medium subunit family protein Involved in vesicle trafficking between the trans -Golgi network and vacuoles. Clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc08G0010410 AT5G02280.1 SNARE-like superfamily protein Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. SNARE-like superfamily protein;(source:Araport11) Ipc08G0010420 AT4G05360.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0010430 AT4G02220.1 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein 0 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein;(source:Araport11) Ipc08G0010440 AT1G56700.4 0 0 Peptidase C15, pyroglutamyl peptidase I-like protein;(source:Araport11) Ipc08G0010450 AT5G26751.1 shaggy-related kinase 11 Encodes a SHAGGY-related kinase involved in meristem organization. It regulates the redox stress response by phosphorylating glucose-6-phosphate dehydrogenase 6.Functions as a positive regulator of salt stress tolerance. Phosphorylates and enhances G6PD6 (At5g40760) activity shaggy-related kinase 11;(source:Araport11) Ipc08G0010460 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0010470 AT1G09430.1 ATP-citrate lyase A-3 Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity. ATP-citrate lyase A-3;(source:Araport11) Ipc08G0010480 AT3G24315.1 Sec20 family protein 0 Sec20 family protein;(source:Araport11) Ipc08G0010490 AT3G53480.1 pleiotropic drug resistance 9 Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. pleiotropic drug resistance 9;(source:Araport11) Ipc08G0010500 AT5G48030.1 gametophytic factor 2 encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. gametophytic factor 2;(source:Araport11) Ipc08G0010510 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc08G0010520 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0010530 AT2G43120.1 RmlC-like cupins superfamily protein Encodes a member of the functionally diverse cupin protein superfamily that is involved in susceptibility to the bacterial plant pathogen Ralstonia solanacearum. It stabilizes the papain-like cysteine protease XCP2. The mRNA is cell-to-cell mobile. RmlC-like cupins superfamily protein;(source:Araport11) Ipc08G0010540 AT1G09520.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0010550 AT3G62200.1 Putative endonuclease or glycosyl hydrolase 0 Putative endonuclease or glycosyl hydrolase;(source:Araport11) Ipc08G0010560 AT1G09450.1 Protein kinase superfamily protein Encodes a protein kinase that phosphorylates histone H3 at Thr3 and Thr11 and plays a role in mitotic cell division. Protein kinase superfamily protein;(source:Araport11) Ipc08G0010570 AT1G56720.4 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0010580 AT5G15930.1 plant adhesion molecule 1 Encodes a putative plant adhesion molecule. plant adhesion molecule 1;(source:Araport11) Ipc08G0010590 AT3G53480.1 pleiotropic drug resistance 9 Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile. pleiotropic drug resistance 9;(source:Araport11) Ipc08G0010600 AT5G26600.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc08G0010610 AT1G11910.1 aspartic proteinase A1 Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). aspartic proteinase A1;(source:Araport11) Ipc08G0010620 AT1G04300.1 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc08G0010630 AT4G33925.1 0 Encodes SSN2 (suppressor of sni1 2), a suppressor of SNI1 (AT4G18470). SSN2 contains a SWIM (SWI2/SNF2 and MuDR) domain found in a variety of prokaryotic and eukaryotic proteins. Involved in plant immune response and homologous recombination. zinc finger SWIM domain protein;(source:Araport11) Ipc08G0010640 AT1G09530.6 0 Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes. phytochrome interacting factor 3;(source:Araport11) Ipc08G0010650 AT1G09540.1 myb domain protein 61 Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size. myb domain protein 61;(source:Araport11) Ipc08G0010660 AT3G05910.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc08G0010670 AT1G24090.1 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc08G0010680 AT3G22220.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc08G0010690 AT5G31412.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc08G0010700 AT5G26680.2 5'-3' exonuclease family protein Encodes a FEN1 homolog that has double-flap endonuclease activity, weak GEN activity towards bubble DNA structures and flap endonuclease activity towards substrates with a single-flap structure, but lacks the 5′ exonuclease activity towards DNA substrates with a nick on one strand, and GEN activity towards gapped DNA without any flap. It is expressed in rapidly dividing cells and mutants have smaller roots and hypocotyls. 5-3 exonuclease family protein;(source:Araport11) Ipc12G0004610 AT2G29420.1 glutathione S-transferase tau 7 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid. glutathione S-transferase tau 7;(source:Araport11) Ipc12G0004620 AT2G18050.1 histone H1-3 encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. The mRNA is cell-to-cell mobile. histone H1-3;(source:Araport11) Ipc12G0004630 AT2G02148.2 0 0 PPR containing protein;(source:Araport11) Ipc12G0004640 AT1G18080.1 Transducin/WD40 repeat-like superfamily protein Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. It is a scaffold protein that acts downstream of and is phosphorylated by WNK8 in the glucose responsiveness and flowering pathways . Knockout mutants show insensitivity to gibberellin in GA-induced seed germination. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc12G0004650 AT1G76250.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0004660 AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH14 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH13 and bHLH17 to negatively regulate jasmonate responses. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc12G0004670 AT3G18060.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc12G0004680 AT3G18080.1 B-S glucosidase 44 0 B-S glucosidase 44;(source:Araport11) Ipc12G0004690 AT2G31440.2 0 Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments. gamma-secretase subunit APH1-like protein;(source:Araport11) Ipc12G0004700 AT1G23010.1 Cupredoxin superfamily protein Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability. Cupredoxin superfamily protein;(source:Araport11) Ipc12G0004710 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0004720 AT3G18050.1 0 0 GPI-anchored protein;(source:Araport11) Ipc12G0004730 AT2G47980.1 sister-chromatid cohesion protein 3 Essential to the monopolar orientation of the kinetochores during meiosis. sister-chromatid cohesion protein 3;(source:Araport11) Ipc12G0004740 AT3G28415.1 ABC transporter family protein 0 ABC transporter family protein;(source:Araport11) Ipc12G0004750 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0004760 AT3G46100.1 Histidyl-tRNA synthetase 1 histidyl-tRNA synthetase Histidyl-tRNA synthetase 1;(source:Araport11) Ipc12G0004770 AT1G18140.1 laccase 1 putative laccase, a member of laccase family of genes (with 17 members in Arabidopsis). laccase 1;(source:Araport11) Ipc12G0004780 AT3G18035.1 winged-helix DNA-binding transcription factor family protein A linker histone like protein winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc12G0004790 AT1G73650.5 0 0 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11) Ipc12G0004800 AT1G18200.1 RAB GTPase homolog A6B 0 Rab GTPase-like A1I protein;(source:Araport11) Ipc12G0004810 AT1G18210.2 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0002310 #N/A #N/A #N/A #N/A Ipc04G0002300 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc04G0002290 AT1G64140.1 0 0 WRKY transcription factor;(source:Araport11) Ipc04G0002280 AT5G19030.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0002270 AT3G23580.1 ribonucleotide reductase 2A Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development. ribonucleotide reductase 2A;(source:Araport11) Ipc04G0002260 AT1G58220.1 Homeodomain-like superfamily protein Plays an essential role in organ development by regulating cell expansion either directly by affecting cell wall architecture and/or cytoplasmic growth or indirectly through the ethylene and/or ABA signaling pathways. Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0002250 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0002240 AT3G23600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0002230 AT4G37310.1 cytochrome P450, family 81, subfamily H, polypeptide 1 member of CYP81H cytochrome P450, family 81, subfamily H, polypeptide 1;(source:Araport11) Ipc06G0018100 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0018090 AT1G76020.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc06G0018080 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc06G0018070 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc06G0018060 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc06G0018050 AT3G43720.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc06G0018040 AT5G06100.1 myb domain protein 33 Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. myb domain protein 33;(source:Araport11) Ipc06G0018030 AT3G03740.1 BTB-POZ and MATH domain 4 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 4;(source:Araport11) Ipc06G0018020 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc01G0013780 AT5G19840.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0013790 AT1G03060.2 0 Encodes a WD/BEACH domain protein involved in cell morphogenesis and ribonucleoprotein particle formation. It interacts with the P-body core component DCP2, associates to mRNA processing bodies (P-bodies), and regulates their assembly upon salt stress. BEACH-DOMAIN HOMOLOG A1;(source:Araport11) Ipc01G0013800 AT3G63370.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0013810 AT3G54560.2 0 Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z. histone H2A 11;(source:Araport11) Ipc01G0013820 AT3G22960.1 Pyruvate kinase family protein encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mRNA is cell-to-cell mobile. Pyruvate kinase family protein;(source:Araport11) Ipc01G0013830 AT2G38830.1 Ubiquitin-conjugating enzyme/RWD-like protein 0 Ubiquitin-conjugating enzyme/RWD-like protein;(source:Araport11) Ipc01G0013840 AT4G02590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0013850 AT4G09990.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc01G0013860 AT5G43700.1 AUX/IAA transcriptional regulator family protein Auxin inducible protein similar to transcription factors. AUX/IAA transcriptional regulator family protein;(source:Araport11) Ipc01G0013870 AT3G54650.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc01G0013880 AT3G54660.1 glutathione reductase Encodes glutathione reductase that is most likely localized in the chloroplast. glutathione reductase;(source:Araport11) Ipc01G0013890 AT2G30570.1 photosystem II reaction center W Encodes PsbW, a protein similar to photosystem II reaction center subunit W. Loss of PsbW destabilizes the supramolecular organization of PSII. photosystem II reaction center W;(source:Araport11) Ipc01G0013900 AT1G06780.1 galacturonosyltransferase 6 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 6;(source:Araport11) Ipc01G0013910 AT5G09690.2 magnesium transporter 7 Transmembrane magnesium transporter. One of nine family members. Loss of function mutants exhibit poor growth under magnesium stress conditions. Splice variant AT5G09690.1 (386 aa) is a functional transporter while AT5G09690.4 (371 aa) does not have transporter activity. magnesium transporter 7;(source:Araport11) Ipc01G0013920 AT2G30580.2 0 Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance. DREB2A-interacting protein 2;(source:Araport11) Ipc01G0013930 AT3G13710.1 prenylated RAB acceptor 1.F4 0 prenylated RAB acceptor 1.F4;(source:Araport11) Ipc01G0013940 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc01G0013950 AT5G09500.1 Ribosomal protein S19 family protein 0 Ribosomal protein S19 family protein;(source:Araport11) Ipc01G0013960 AT2G30620.1 winged-helix DNA-binding transcription factor family protein 0 winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc01G0013970 AT3G04610.4 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc01G0013980 AT3G56630.1 cytochrome P450, family 94, subfamily D, polypeptide 2 member of CYP94D cytochrome P450, family 94, subfamily D, polypeptide 2;(source:Araport11) Ipc01G0013990 AT5G63450.1 cytochrome P450, family 94, subfamily B, polypeptide 1 0 cytochrome P450, family 94, subfamily B, polypeptide 1;(source:Araport11) Ipc01G0014000 AT4G16430.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH3 interacts with JAZ proteins, and functions redundantly with bHLH13, bHLH14 and bHLH17 to negatively regulate jasmonate responses. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0014010 AT3G29450.1 General transcription factor 2-related zinc finger protein 0 General transcription factor 2-related zinc finger protein;(source:Araport11) Ipc01G0014020 AT2G02840.1 0 0 nucleic acid/zinc ion-binding protein;(source:Araport11) Ipc01G0014030 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0014040 AT4G16740.4 0 Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity. terpene synthase 03;(source:Araport11) Ipc01G0014050 AT5G14870.1 cyclic nucleotide-gated channel 18 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth and pollen tube guidance to ovules. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. Also functions as a Ca2+ permeable channel. cyclic nucleotide-gated channel 18;(source:Araport11) Ipc01G0014060 AT1G08730.2 0 Encodes a class XI myosin that is involved in organelle motility, actin organization, and optimal growth of pollen tubes. Myosin family protein with Dil domain-containing protein;(source:Araport11) Ipc01G0014070 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc01G0014080 AT3G58190.1 lateral organ boundaries-domain 29 This gene contains two auxin-responsive element (AuxRE). lateral organ boundaries-domain 29;(source:Araport11) Ipc01G0014090 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0014100 AT2G31280.2 conserved peptide upstream open reading frame 7 Encodes a LHW-like protein with 80% amino acid identity to LHW. transcription factor bHLH155-like protein;(source:Araport11) Ipc01G0014110 AT1G53760.1 0 0 K+-H+ exchange-like protein;(source:Araport11) Ipc01G0014120 AT1G19800.6 0 Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. trigalactosyldiacylglycerol 1;(source:Araport11) Ipc01G0014130 AT2G31270.1 homolog of yeast CDT1 A Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast. CDT1-like protein A;(source:Araport11) Ipc01G0014140 AT2G31240.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0014150 AT5G43420.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0014160 AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. The mRNA is cell-to-cell mobile. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0014170 AT3G23230.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc01G0014180 AT2G38940.1 phosphate transporter 1;4 Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. The mRNA is cell-to-cell mobile. phosphate transporter 1;(source:Araport11) Ipc01G0014190 AT2G31200.1 actin depolymerizing factor 6 Encodes actin depolymerizing factor 6 (ADF6). The mRNA is cell-to-cell mobile. actin depolymerizing factor 6;(source:Araport11) Ipc01G0014200 AT2G31180.1 myb domain protein 14 Member of the R2R3 factor gene family. myb domain protein 14;(source:Araport11) Ipc01G0014210 AT1G30690.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc01G0014220 AT1G06200.1 Peptidase S24/S26A/S26B/S26C family protein 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc01G0014230 AT4G19890.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc01G0014240 AT2G31160.1 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc01G0014250 AT4G28530.1 NAC domain containing protein 74 Member of NAC family of transcription factors. Along with NAC2, KIR1 positively regulates programmed cell death of stigmatic tissue. NAC domain containing protein 74;(source:Araport11) Ipc01G0014260 AT2G20495.1 0 0 Serine/Threonine-kinase;(source:Araport11) Ipc01G0014270 AT4G21150.3 ribophorin II (RPN2) family protein 0 ribophorin II (RPN2) family protein;(source:Araport11) Ipc01G0014280 AT4G21150.3 ribophorin II (RPN2) family protein 0 ribophorin II (RPN2) family protein;(source:Araport11) Ipc01G0014290 AT1G03905.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0014300 AT3G23310.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc01G0014310 AT3G54220.1 GRAS family transcription factor Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR. SCR and SCR-LIKE 23 act redundantly in bundle sheath cell fate specification. GRAS family transcription factor;(source:Araport11) Ipc01G0014320 AT4G14340.1 casein kinase I Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins. Member of CKL gene family (CKL-C group). casein kinase I;(source:Araport11) Ipc01G0014330 AT4G27090.1 Ribosomal protein L14 0 Ribosomal protein L14;(source:Araport11) Ipc01G0014340 AT2G20440.2 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc01G0014350 AT4G28556.1 PAK-box/P21-Rho-binding family protein Encodes RIC7, the downstream effector of active Rop2 GTPase. PAK-box/P21-Rho-binding family protein;(source:Araport11) Ipc01G0014360 AT4G28560.1 ROP-interactive CRIB motif-containing protein 7 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC6 and RIC8 (subfamily group II). Gene is expressed in all tissues examined. ROP-interactive CRIB motif-containing protein 7;(source:Araport11) Ipc01G0014370 AT4G28570.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc01G0014380 AT2G20420.1 ATP citrate lyase (ACL) family protein 0 ATP citrate lyase (ACL) family protein;(source:Araport11) Ipc01G0014390 AT4G28600.2 0 encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. no pollen germination related 2;(source:Araport11) Ipc01G0014400 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc01G0014410 AT1G32580.1 plastid developmental protein DAG, putative Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. plastid developmental protein DAG;(source:Araport11) Ipc01G0014420 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc01G0014430 AT1G04020.2 breast cancer associated RING 1 Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein-protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. breast cancer associated RING 1;(source:Araport11) Ipc01G0014440 AT1G04030.2 0 0 eisosome protein;(source:Araport11) Ipc01G0014450 AT5G29000.2 Homeodomain-like superfamily protein MYB-CC family member. PHL1 acts redundantly with PHR1 to regulate responses to Pi starvation. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0014460 AT3G04400.1 Ribosomal protein L14p/L23e family protein 0 Ribosomal protein L14p/L23e family protein;(source:Araport11) Ipc01G0014470 AT5G44000.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc01G0014480 AT5G43990.4 SET-domain containing protein lysine methyltransferase family protein Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc01G0014490 AT1G04520.1 plasmodesmata-located protein 2 Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. plasmodesmata-located protein 2;(source:Araport11) Ipc01G0014500 AT1G04080.4 0 Encodes a U1 small nuclear ribonucleoprotein (snRNP) factor involved in alternative splicing. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0014510 AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0014520 AT4G28650.1 Leucine-rich repeat transmembrane protein kinase family protein Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc01G0014530 AT1G04110.1 Subtilase family protein Initially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases. Subtilase family protein;(source:Araport11) Ipc01G0014540 AT2G20370.1 Exostosin family protein Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials. The mRNA is cell-to-cell mobile. Exostosin family protein;(source:Araport11) Ipc01G0014550 AT2G20360.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0014560 AT2G20310.1 RPM1 interacting protein 13 Encodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1. RPM1 interacting protein 13;(source:Araport11) Ipc01G0014570 AT1G04130.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0014580 AT4G13510.1 ammonium transporter 1;1 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. The mRNA is cell-to-cell mobile. ammonium transporter 1;(source:Araport11) Ipc01G0014590 AT3G04300.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc01G0014600 AT5G43920.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0014610 AT4G28706.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc01G0014620 AT1G04150.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc01G0014630 AT5G43900.3 myosin 2 Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2;(source:Araport11) Ipc01G0014640 AT4G28720.1 Flavin-binding monooxygenase family protein Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc01G0014650 AT2G20270.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc01G0014660 AT2G20260.1 photosystem I subunit E-2 Encodes subunit E of photosystem I. The mRNA is cell-to-cell mobile. photosystem I subunit E-2;(source:Araport11) Ipc01G0014670 AT2G20250.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0014680 AT4G28760.2 Protein of unknown function (DUF3741) 0 methyl-coenzyme M reductase II subunit gamma, putative (DUF3741);(source:Araport11) Ipc01G0014690 AT5G33370.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. Mutants are defective in cuticle formation with reduced sepal cuticle ridge formation. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc01G0014700 AT2G20190.1 CLIP-associated protein Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability. CLIP-associated protein;(source:Araport11) Ipc01G0014710 AT4G28820.1 HIT-type Zinc finger family protein 0 HIT-type Zinc finger family protein;(source:Araport11) Ipc01G0014720 AT4G29040.1 regulatory particle AAA-ATPase 2A RPT2a encodes the 26S proteasome subunit. It is required for root meristem maintenance, and regulates gametogenesis. RPT2a is also shown to regulate gene silencing via DNA methylation. regulatory particle AAA-ATPase 2A;(source:Araport11) Ipc01G0014730 AT4G29020.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc01G0014740 AT3G24650.1 AP2/B3-like transcriptional factor family protein Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230). AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0014750 AT5G48940.1 Leucine-rich repeat transmembrane protein kinase family protein RGFR2 is a leucine-­rich repeat receptor kinase that, together with RGFR1 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development. Leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc01G0014760 AT4G13220.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0014770 AT1G77120.1 alcohol dehydrogenase 1 Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. alcohol dehydrogenase 1;(source:Araport11) Ipc01G0014780 AT3G24660.1 transmembrane kinase-like 1 member of Receptor kinase-like protein family transmembrane kinase-like 1;(source:Araport11) Ipc01G0014790 AT4G13710.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0014800 AT3G07020.2 UDP-Glycosyltransferase superfamily protein encodes a 3beta-hydroxy sterol UDP-glucosyltransferase. ugt80a2 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels and reduced seed size. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0014810 AT2G33150.1 peroxisomal 3-ketoacyl-CoA thiolase 3 Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase. peroxisomal 3-ketoacyl-CoA thiolase 3;(source:Araport11) Ipc01G0014820 AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP 0 mRNA splicing factor, thioredoxin-like U5 snRNP;(source:Araport11) Ipc01G0014830 AT3G24740.6 0 0 cellulose synthase, putative (DUF1644);(source:Araport11) Ipc01G0014840 AT3G24750.2 0 Encodes a member of the LAZY gene family that is expressed in the hypocotyl and the root hypothetical protein;(source:Araport11) Ipc01G0014850 AT5G48850.1 Tetratricopeptide repeat (TPR)-like superfamily protein Homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0014860 AT1G04750.4 0 Encodes vesicle-associated membrane protein 7B (VAMP7B, or VAMP721). Required for cell plate formation.VAMP721 interacts with KAT1 and KC1 K+ channels, affects channel gating and suppresses the K+ current within the physiological voltage range. Post-transcriptionally regulated by CRT1/2 under ER stress. vesicle-associated membrane protein 721;(source:Araport11) Ipc01G0014870 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc01G0014880 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc01G0014890 AT5G48830.1 0 0 phosphoglycolate phosphatase;(source:Araport11) Ipc01G0014900 AT3G07070.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0014910 AT3G07090.2 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc01G0014920 AT1G10340.2 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc01G0014930 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc01G0014940 AT3G24820.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc02G0020910 AT3G06880.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0020900 AT5G27760.1 Hypoxia-responsive family protein 0 Hypoxia-responsive family protein;(source:Araport11) Ipc02G0020890 AT5G49110.4 0 0 fanconi anemia group I-like protein;(source:Araport11) Ipc02G0020880 AT4G15940.1 Fumarylacetoacetate (FAA) hydrolase family 0 Fumarylacetoacetate (FAA) hydrolase family;(source:Araport11) Ipc02G0020870 AT3G06810.1 acyl-CoA dehydrogenase-related Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation. The mRNA is cell-to-cell mobile. acyl-CoA dehydrogenase-like protein;(source:Araport11) Ipc02G0020860 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc02G0020850 AT4G02510.4 0 An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.The mRNA is cell-to-cell mobile. translocon at the outer envelope membrane of chloroplasts 159;(source:Araport11) Ipc02G0020840 AT2G32760.1 0 Homolog of yeast VPS38P. Interacts with PI3K.Mutants have defects in late endosome morphology and retromer function. UV radiation resistance-associated protein;(source:Araport11) Ipc02G0020830 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc02G0020820 AT4G01140.1 Protein of unknown function (DUF1191) 0 transmembrane protein, putative (DUF1191);(source:Araport11) Ipc02G0020810 AT2G04520.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc02G0020800 AT2G46260.1 BTB/POZ/Kelch-associated protein Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. BTB/POZ/Kelch-associated protein;(source:Araport11) Ipc02G0020790 AT3G61590.1 Galactose oxidase/kelch repeat superfamily protein F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0020780 AT4G01200.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0020770 AT2G46240.1 BCL-2-associated athanogene 6 A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. The mRNA is cell-to-cell mobile. BCL-2-associated athanogene 6;(source:Araport11) Ipc02G0020760 AT2G46230.1 PIN domain-like family protein 0 PIN domain-like family protein;(source:Araport11) Ipc02G0020750 AT4G01210.1 glycosyl transferase family 1 protein 0 glycosyl transferase family 1 protein;(source:Araport11) Ipc02G0020740 AT2G46225.1 ABI-1-like 1 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins. ABI-1-like 1;(source:Araport11) Ipc02G0020730 AT2G46220.1 Uncharacterized conserved protein (DUF2358) 0 DUF2358 family protein (DUF2358);(source:Araport11) Ipc02G0020720 AT2G46210.1 Fatty acid/sphingolipid desaturase 0 Fatty acid/sphingolipid desaturase;(source:Araport11) Ipc02G0020710 AT5G24090.1 chitinase A Chitinase A (class III) expressed exclusively under environmental stress conditions. Shown be a plant lysozyme involved in plant immunity. chitinase A;(source:Araport11) Ipc02G0020700 AT4G27230.2 histone H2A 2 Encodes HTA2, a histone H2A protein. histone H2A 2;(source:Araport11) Ipc02G0020690 AT2G46180.1 golgin candidate 4 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC4 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (169 aa) portion of the protein. golgin Putative 4;(source:Araport11) Ipc02G0020680 AT3G61550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0020670 AT2G46150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc02G0020660 AT3G61540.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0020650 AT4G01280.2 Homeodomain-like superfamily protein RVE5 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation. Homeodomain-like superfamily protein;(source:Araport11) Ipc02G0020640 AT2G46090.1 Diacylglycerol kinase family protein Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs. Diacylglycerol kinase family protein;(source:Araport11) Ipc02G0020630 AT2G46100.1 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc02G0020620 AT4G00290.1 Mechanosensitive ion channel protein Encodes a non-selective mechanosensitive ion channel localized to the inner mitochondrial membrane. Mechanosensitive ion channel protein;(source:Araport11) Ipc02G0020610 AT3G61490.4 0 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0020600 AT4G01370.1 MAP kinase 4 Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. The mRNA is cell-to-cell mobile. MAP kinase 4;(source:Araport11) Ipc02G0020590 AT2G46080.1 0 Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal. BPS1-like protein;(source:Araport11) Ipc02G0020580 AT4G00330.2 0 high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2;(source:Araport11) Ipc02G0020570 AT4G00335.3 RING-H2 finger B1A 0 RING-H2 finger B1A;(source:Araport11) Ipc02G0020560 AT4G00340.1 receptor-like protein kinase 4 Encodes a receptor-like protein kinase that is expressed in roots. receptor-like protein kinase 4;(source:Araport11) Ipc02G0020550 AT1G63800.1 ubiquitin-conjugating enzyme 5 0 ubiquitin-conjugating enzyme 5;(source:Araport11) Ipc02G0020540 AT4G00355.3 0 Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network. mesoderm induction early response protein;(source:Araport11) Ipc02G0020530 AT4G29910.1 origin recognition complex protein 5 Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits. origin recognition complex protein 5;(source:Araport11) Ipc02G0020520 AT4G00370.1 Major facilitator superfamily protein Encodes an inorganic phosphate transporter (PHT4;4) that can transport ascorbate and is located in the chloroplast envelope membrane. It has been shown to play a role in the xanthophyll cycle during photosynthesis and may be required for tolerance to strong light stress. Major facilitator superfamily protein;(source:Araport11) Ipc02G0020510 AT4G00430.1 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1;(source:Araport11) Ipc02G0020500 AT4G13263.1 Protein of unknown function (DUF784) 0 ECA1 gametogenesis family protein (DUF784);(source:Araport11) Ipc02G0020490 AT5G44500.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc02G0020480 AT3G61350.2 0 Encodes an SKP1 interacting partner (SKIP4). SKP1 interacting partner 4;(source:Araport11) Ipc02G0020470 AT4G00525.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0020460 AT4G00530.1 0 0 UvrABC system protein A;(source:Araport11) Ipc02G0020450 AT4G15900.1 pleiotropic regulatory locus 1 Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10. pleiotropic regulatory locus 1;(source:Araport11) Ipc02G0020440 AT2G45850.2 AT hook motif DNA-binding family protein 0 AT hook motif DNA-binding family protein;(source:Araport11) Ipc02G0020430 AT1G74280.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0020420 AT4G11610.3 0 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc02G0020410 AT3G61230.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc02G0020400 AT4G00660.2 RNAhelicase-like 8 0 RNAhelicase-like 8;(source:Araport11) Ipc02G0020390 AT1G01750.1 actin depolymerizing factor 11 0 actin depolymerizing factor 11;(source:Araport11) Ipc02G0020380 AT4G00630.1 K+ efflux antiporter 2 Encodes a K(+)/H(+) antiporter that modulates monovalent cation and pH homeostasis in plant chloroplasts or plastids. K+ efflux antiporter 2;(source:Araport11) Ipc02G0020360 AT2G45790.1 phosphomannomutase Encodes a cytoplasmic phosphomannomutase, involved in ascorbate biosynthesis phosphomannomutase;(source:Araport11) Ipc02G0020370 AT1G67620.1 Lojap-related protein 0 Lojap-related protein;(source:Araport11) Ipc02G0020350 AT4G00570.1 NAD-dependent malic enzyme 2 Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day. NAD-dependent malic enzyme 2;(source:Araport11) Ipc02G0020340 AT4G00550.2 0 encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane. digalactosyl diacylglycerol deficient 2;(source:Araport11) Ipc02G0020330 AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein AOR is an alkenal/one oxidoreductase that acts on compounds with unsaturated alpha,beta-carbonyls. The activity of this enzyme with a number of substrates, including acrolein and 3-buten-2-one, was demonstrated in vitro using a truncated form of the protein that lacked approximately 80 of the first amino acids. This protein appears to localize to the chloroplast where it likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc02G0020320 AT3G61050.2 Calcium-dependent lipid-binding (CaLB domain) family protein Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0020310 AT2G45620.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc02G0020300 AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein Hydroxyphenylpyruvate reductase (HPPR) family member with low activity. D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11) Ipc02G0020290 AT2G45640.1 SIN3 associated polypeptide P18 Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo. SIN3 associated polypeptide P18;(source:Araport11) Ipc02G0020280 AT2G45650.1 AGAMOUS-like 6 Sequence suggests this encodes a MADS-box transcription factor. Negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis. AGAMOUS-like 6;(source:Araport11) Ipc02G0020270 AT2G45660.1 AGAMOUS-like 20 Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA. AGAMOUS-like 20;(source:Araport11) Ipc02G0020260 AT2G45670.1 calcineurin B subunit-related Encodes an acyl-CoA: lysophosphatidylethanolamine acyltransferase with 20:0-CoA being the best acyl donor. Mutations adversely affect the growth of plants and result in decreased lipid content in roots and seeds. calcineurin B subunit-like protein;(source:Araport11) Ipc02G0020250 AT4G00230.1 xylem serine peptidase 1 0 xylem serine peptidase 1;(source:Araport11) Ipc02G0020240 AT1G01900.1 subtilase family protein Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide. subtilase family protein;(source:Araport11) Ipc02G0020230 AT2G42010.1 phospholipase D beta 1 phospholipase D (PLDbeta) phospholipase D beta 1;(source:Araport11) Ipc02G0020220 AT2G45690.1 shrunken seed protein (SSE1) Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica. shrunken seed protein (SSE1);(source:Araport11) Ipc02G0020210 AT3G61113.1 Ubiquitin related modifier 1 0 Ubiquitin related modifier 1;(source:Araport11) Ipc02G0020200 AT1G01910.4 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0020190 AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein Encodes a member of the PHOSPHATE TRANSPORTER 5 family (PHT5;3). Overexpression of PHT5:3 leads to Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes. Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein;(source:Araport11) Ipc02G0020180 AT5G62150.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc02G0020170 AT4G14480.1 Protein kinase superfamily protein Encodes a putative Ser/Thr protein kinase, BLUS1 (BLUE LIGHT SIGNALING1). BLUS1 functions as a phototropin substrate and primary regulator of stomatal control to enhance photosynthetic CO2 assimilation under natural light conditions. Protein kinase superfamily protein;(source:Araport11) Ipc02G0020160 AT1G01860.1 Ribosomal RNA adenine dimethylase family protein dimethyladenosine transferase Ribosomal RNA adenine dimethylase family protein;(source:Araport11) Ipc02G0020150 AT3G61080.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0020140 AT1G04360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0020130 AT5G19790.1 related to AP2 11 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. related to AP2 11;(source:Araport11) Ipc02G0020120 AT2G45720.5 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0020110 AT3G61140.1 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development. COP9 signalosome complex subunit 1;(source:Araport11) Ipc02G0020100 AT4G00740.2 0 Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0020090 AT4G00720.1 shaggy-like protein kinase 32 Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway. shaggy-like protein kinase 32;(source:Araport11) Ipc02G0020080 AT3G61180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0020070 AT3G61190.2 BON association protein 1 Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis. BON association protein 1;(source:Araport11) Ipc02G0020060 AT1G63220.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc02G0020050 AT2G45490.1 ataurora3 Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells. ataurora3;(source:Araport11) Ipc02G0020040 AT2G36400.1 growth-regulating factor 3 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower. growth-regulating factor 3;(source:Araport11) Ipc02G0020030 AT3G60900.1 FASCICLIN-like arabinogalactan-protein 10 0 FASCICLIN-like arabinogalactan-protein 10;(source:Araport11) Ipc02G0020020 AT1G01930.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc02G0020010 AT2G45460.2 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc02G0020000 AT4G00220.1 Lateral organ boundaries (LOB) domain family protein Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. A maternally expressed imprinted gene. Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc02G0019990 AT3G60810.1 0 0 DUF1499 family protein;(source:Araport11) Ipc02G0019980 AT4G00090.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc02G0019970 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc02G0019960 AT1G73300.2 0 0 serine carboxypeptidase-like 2;(source:Araport11) Ipc02G0019950 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc02G0019940 AT1G73300.2 0 0 serine carboxypeptidase-like 2;(source:Araport11) Ipc02G0019930 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc02G0019920 AT4G00100.1 ribosomal protein S13A Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development The mRNA is cell-to-cell mobile. ribosomal protein S13A;(source:Araport11) Ipc02G0019910 AT4G00110.1 UDP-D-glucuronate 4-epimerase 3 Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. UDP-D-glucuronate 4-epimerase 3;(source:Araport11) Ipc02G0019900 AT2G45300.4 0 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisThe mRNA is cell-to-cell mobile. RNA 3-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta;(source:Araport11) Ipc02G0019890 AT2G45300.4 0 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisThe mRNA is cell-to-cell mobile. RNA 3-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta;(source:Araport11) Ipc02G0019880 AT2G45300.3 0 encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesisThe mRNA is cell-to-cell mobile. RNA 3-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta;(source:Araport11) Ipc02G0019870 AT3G60730.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc02G0019860 AT2G45200.1 golgi snare 12 Encodes a member of the GOS1 (Golgi SNARE) gene family. golgi snare 12;(source:Araport11) Ipc02G0019850 AT2G45190.1 Plant-specific transcription factor YABBY family protein Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS). Plant-specific transcription factor YABBY family protein;(source:Araport11) Ipc02G0019840 AT3G60670.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc02G0019830 AT4G00165.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc02G0019810 AT4G00060.4 0 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc02G0019820 AT4G00150.1 GRAS family transcription factor Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization. GRAS family transcription factor;(source:Araport11) Ipc02G0019800 AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain 0 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein;(source:Araport11) Ipc02G0019790 AT3G60580.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc02G0019780 AT1G02040.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc02G0019770 AT3G60550.1 cyclin p3;2 0 cyclin p3;(source:Araport11) Ipc02G0019760 AT3G60540.3 0 0 Preprotein translocase Sec, Sec61-beta subunit protein;(source:Araport11) Ipc02G0019750 AT2G45040.1 Matrixin family protein 0 Matrixin family protein;(source:Araport11) Ipc02G0019740 AT1G02065.1 squamosa promoter binding protein-like 8 Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation. squamosa promoter binding protein-like 8;(source:Araport11) Ipc02G0019720 AT1G34770.3 0 Encodes a nuclear localized, structural subunit of the SMC 5/6 complex and a non- SMC element. Loss of function results in abnormal cell division and embryo lethality. Analysis of partially rescued lines indicates a role in double strand break DNA repair. Similar phenotype to NSE1 which it also interacts with. melanoma-associated antigen G1-like protein;(source:Araport11) Ipc02G0019730 #N/A #N/A #N/A #N/A Ipc02G0019710 AT4G25170.1 Uncharacterised conserved protein (UCP012943) 0 Uncharacterized conserved protein (UCP012943);(source:Araport11) Ipc02G0019700 AT2G44990.3 0 More Axillary Branching; carotenoid cleavage dioxygenases. carotenoid cleavage dioxygenase 7;(source:Araport11) Ipc02G0019690 AT2G44940.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc02G0019680 AT3G60450.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc02G0019670 AT3G60410.3 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc02G0019660 AT4G17440.3 0 0 chromogranin (DUF1639);(source:Araport11) Ipc02G0019650 AT1G11930.1 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0 Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11) Ipc02G0019640 AT3G60370.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined. FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc02G0019630 AT2G44900.2 0 ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings. ARABIDILLO-1;(source:Araport11) Ipc02G0019620 AT3G60340.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0019610 AT2G44880.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc02G0019590 AT2G44850.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0019600 AT5G56530.2 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase (DUF239);(source:Araport11) Ipc02G0019580 AT2G44840.1 ethylene-responsive element binding factor 13 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene-responsive element binding factor 13;(source:Araport11) Ipc02G0019570 AT2G44840.1 ethylene-responsive element binding factor 13 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene-responsive element binding factor 13;(source:Araport11) Ipc02G0019560 AT2G44840.1 ethylene-responsive element binding factor 13 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile. ethylene-responsive element binding factor 13;(source:Araport11) Ipc02G0019550 AT2G44810.2 0 Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0019540 AT2G44810.2 0 Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0019530 AT4G17520.1 Hyaluronan / mRNA binding family 0 Hyaluronan / mRNA binding family;(source:Araport11) Ipc02G0019520 AT1G02130.1 RAS 5 Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5;(source:Araport11) Ipc02G0019510 AT2G44760.1 Domain of unknown function (DUF3598) 0 dihydroorotate dehydrogenase (DUF3598);(source:Araport11) Ipc02G0019500 AT3G60260.4 ELMO/CED-12 family protein 0 ELMO/CED-12 family protein;(source:Araport11) Ipc02G0019490 AT1G02145.3 homolog of asparagine-linked glycosylation 12 0 homolog of asparagine-linked glycosylation 12;(source:Araport11) Ipc02G0019480 AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein 0 PRA1 (Prenylated rab acceptor) family protein;(source:Araport11) Ipc02G0019470 AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0019460 AT2G44740.1 cyclin p4;1 0 cyclin p4;(source:Araport11) Ipc02G0019450 AT2G44730.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein 0 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11) Ipc02G0019440 AT2G44710.4 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0019430 AT2G30410.3 0 mutant has embryo defect; enlarged embryo cells and endosperm nuclei; Tubulin Folding Cofactor A tubulin folding cofactor A (KIESEL);(source:Araport11) Ipc02G0019420 AT2G44680.1 casein kinase II beta subunit 4 Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock. casein kinase II beta subunit 4;(source:Araport11) Ipc02G0019410 AT3G10950.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc02G0019400 AT1G66950.1 pleiotropic drug resistance 11 Encodes a plasma membrane-localized ABC transporter. Confers tolerance to herbicide paraquat. pleiotropic drug resistance 11;(source:Araport11) Ipc02G0019390 AT3G60240.2 eukaryotic translation initiation factor 4G protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. eukaryotic translation initiation factor 4G;(source:Araport11) Ipc02G0019380 AT2G44610.1 Ras-related small GTP-binding family protein Golgi-localized small GTPase, participates in the trafficking of CESA6 to the plasma membrane, maintaining Golgi organization and morphology, possible role in exocytosis. Plays and important role in hypocotyl growth by influencing cell elongation/growth and deposition of cellulose microfibrils in the cell wall. Plays an important role in cellulose synthesis. Influences both the distribution and velocity of cellulose synthase complexes in the plasma membrane. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. Ras-related small GTP-binding family protein;(source:Araport11) Ipc02G0019370 AT2G44600.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0019360 AT3G60190.1 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ‘dynamin 2‘ domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E;(source:Araport11) Ipc02G0019350 AT1G80770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0019340 AT5G26667.4 0 encodes a uridine 5 Prime-monophosphate (UMP)/cytidine 5 Prime-monophosphate (CMP) kinase.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0019330 AT3G20230.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc02G0019320 AT1G08840.4 0 Encodes a homolog of human and yeast DNA2. Mutants have increased sensitivity to DNA damage stress. DNA replication helicase;(source:Araport11) Ipc02G0019310 AT2G44530.1 Phosphoribosyltransferase family protein 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc02G0019300 AT1G05160.2 0 Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family. cytochrome P450, family 88, subfamily A, polypeptide 3;(source:Araport11) Ipc02G0019290 AT3G56891.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc02G0019280 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc02G0019270 AT5G36228.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc02G0019260 AT5G58220.1 transthyretin-like protein Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process. transthyretin-like protein;(source:Araport11) Ipc02G0019250 #N/A #N/A #N/A #N/A Ipc02G0019240 AT2G35270.1 Predicted AT-hook DNA-binding family protein Direct target of AGAMOUS. Regulates patterning and differentiation of reproductive organs. Putative AT-hook DNA-binding family protein;(source:Araport11) Ipc02G0019230 AT4G16580.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0019220 AT3G03550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0019210 AT3G03520.1 non-specific phospholipase C3 Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis. non-specific phospholipase C3;(source:Araport11) Ipc02G0019200 AT3G59600.1 RNA polymerase Rpb8 One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250. RNA polymerase Rpb8;(source:Araport11) Ipc02G0019190 AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0019180 AT3G03580.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0019170 AT1G64830.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc02G0019160 AT5G17690.1 like heterochromatin protein (LHP1) Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc02G0019150 AT3G60910.2 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0019140 AT3G03600.1 ribosomal protein S2 Structural component of the mitochondrial ribosome small subunit ribosomal protein S2;(source:Araport11) Ipc02G0019130 AT2G44310.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc02G0019120 AT5G60820.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0019110 AT2G31945.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0019100 AT4G16580.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0019090 AT2G44410.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc02G0019080 AT5G06710.1 homeobox from Arabidopsis thaliana Homeobox-leucine zipper protein. homeobox leucine zipper protein;(source:Araport11) Ipc02G0019070 AT2G44430.1 DNA-binding bromodomain-containing protein 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc02G0019060 AT2G44440.1 Emsy N Terminus (ENT) domain-containing protein 0 Emsy N Terminus (ENT) domain-containing protein;(source:Araport11) Ipc02G0019050 AT3G08505.3 0 0 zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc02G0019040 AT3G57450.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0019030 AT5G13710.2 sterol methyltransferase 1 SMT1 controls the level of cholesterol in plants sterol methyltransferase 1;(source:Araport11) Ipc02G0019020 AT3G08030.1 Protein of unknown function, DUF642 The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination. DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642);(source:Araport11) Ipc02G0019010 AT5G21080.1 Uncharacterized protein 0 Uncharacterized protein;(source:Araport11) Ipc02G0019000 AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative 0 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP;(source:Araport11) Ipc02G0018990 AT4G21240.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0018980 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc02G0018970 AT3G08020.1 PHD finger family protein 0 PHD finger family protein;(source:Araport11) Ipc02G0018960 AT3G63510.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc02G0018950 AT3G07970.1 Pectin lyase-like superfamily protein Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. Pectin lyase-like superfamily protein;(source:Araport11) Ipc02G0018940 AT5G05170.1 Cellulose synthase family protein Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification. Cellulose synthase family protein;(source:Araport11) Ipc02G0018930 AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative 0 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP;(source:Araport11) Ipc02G0018920 AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain 0 CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11) Ipc02G0018910 AT3G60320.1 Protein of unknown function (DUF630 and DUF632) 0 bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11) Ipc02G0018900 AT5G48030.1 gametophytic factor 2 encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development. gametophytic factor 2;(source:Araport11) Ipc02G0018890 AT5G08430.2 0 0 SWIB/MDM2 and Plus-3 and GYF domain-containing protein;(source:Araport11) Ipc02G0018880 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc02G0018870 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc02G0018860 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc02G0018850 AT3G63490.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc02G0018840 AT3G24090.1 glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases Encodes a glutamine-fructose-6-phosphate transaminase that likely plays a role in UDP-N-acetylglucosamine biosynthesis. putative glucosamine-fructose-6-phosphate aminotransferase;(source:Araport11) Ipc02G0018830 AT5G13780.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein Encodes the catalytic subunit of a N-terminal acetyltransferase. Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc02G0018820 AT1G01550.2 Protein of unknown function (DUF793) Encodes a protein with no functionally characterized domains that to prevent the synthesis of a novel substance that moves from the root to the shoot, where it modifies shoot growth by interfering with auxin signaling. Synthesis and delivery of this substance requires neither phloem nor endodermis. BPS1-like protein (DUF793);(source:Araport11) Ipc02G0018810 AT2G28420.1 Lactoylglutathione lyase / glyoxalase I family protein Vicinal oxygen chelate (VOC) superfamily member. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc02G0018800 AT3G63460.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc02G0018790 AT5G13800.3 0 Encodes a pheophytinase that is involved in chlorophyll breakdown. Its transcript levels increase during senescence and pph-1 mutants have a stay-green phenotype. pheophytinase;(source:Araport11) Ipc02G0018780 AT4G18780.1 cellulose synthase family protein Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. cellulose synthase family protein;(source:Araport11) Ipc02G0018770 AT3G21100.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0018760 AT5G63940.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc02G0018750 AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0018740 AT5G16530.1 Auxin efflux carrier family protein Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis. Auxin efflux carrier family protein;(source:Araport11) Ipc02G0018730 AT5G16530.1 Auxin efflux carrier family protein Encodes PIN5, an atypical member of the PIN family. PIN5 is a functional auxin transporter that is required for auxin-mediated development. PIN5 does not have a direct role in cell-to-cell transport but regulates intracellular auxin homeostasis and metabolism. PIN5 localizes, unlike other characterized plasma membrane PIN proteins, to endoplasmic reticulum (ER), presumably mediating auxin flow from the cytosol to the lumen of the ER. It acts together with PIN8 in affecting pollen development and auxin homeostasis. Auxin efflux carrier family protein;(source:Araport11) Ipc02G0018720 AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 38;(source:Araport11) Ipc02G0018710 AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc02G0018700 AT2G38780.1 0 0 cytochrome C oxidase subunit;(source:Araport11) Ipc02G0018690 AT1G52340.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc02G0018680 AT1G20780.3 0 Encodes a protein containing a U-box and an ARM domain. Homozygous mutant seedlings have a seedling lethal phenotype with widespread cell death lesions throughout the cotyledons and roots. senescence-associated E3 ubiquitin ligase 1;(source:Araport11) Ipc02G0018670 AT3G54500.1 0 Member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK2 along with LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex. Functions as a transcriptional coactivator. agglutinin-like protein;(source:Araport11) Ipc02G0018660 AT3G54480.5 0 Encodes an SKP1 interacting partner (SKIP5). SKP1/ASK-interacting protein 5;(source:Araport11) Ipc02G0018650 AT1G77405.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0018640 AT3G07300.2 NagB/RpiA/CoA transferase-like superfamily protein 0 NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11) Ipc02G0018630 AT3G61790.1 Protein with RING/U-box and TRAF-like domains 0 Protein with RING/U-box and TRAF-like domain;(source:Araport11) Ipc02G0018620 AT3G54470.1 uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis uridine 5-monophosphate synthase / UMP synthase (PYRE-F) (UMPS);(source:Araport11) Ipc02G0018610 AT5G13810.1 Glutaredoxin family protein 0 Glutaredoxin family protein;(source:Araport11) Ipc02G0018600 AT3G57040.2 0 response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2 response regulator 9;(source:Araport11) Ipc02G0018590 AT3G07960.1 Phosphatidylinositol-4-phosphate 5-kinase family protein Encodes phosphatidylinositol-4-phosphate 5-kinase 6 (PIP5K6). Regulates clathrin-dependent endocytosis in pollen tubes. Phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc02G0018580 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc02G0018570 AT5G06120.6 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc02G0018560 AT3G09520.1 exocyst subunit exo70 family protein H4 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein H4;(source:Araport11) Ipc02G0018550 AT1G07710.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc02G0018540 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc02G0018530 AT3G13670.1 Protein kinase family protein MUT9-like protein kinase. Contributes to phosphorylation of photoexcited CRY2. Interaction with CRY2 occurs via the non catalytic PPKC domain.MLK4 phosphorylates the conserved H2A serine 95 residue. Synthetic mutants that cannot phosphorylate H2AS95 fail to complement the late flowering phenotype suggesting that MLK4 promotes long day flowering via phosphorylation.MLK4 is required for H2A295 phosphorylation of GI. Protein kinase family protein;(source:Araport11) Ipc02G0018520 AT1G63700.2 0 Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. Protein kinase superfamily protein;(source:Araport11) Ipc02G0018510 AT3G49450.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0018500 AT3G49450.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc02G0018490 AT3G09560.4 0 The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 μM Pi. Lipin family protein;(source:Araport11) Ipc02G0018480 AT5G18520.1 Lung seven transmembrane receptor family protein Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. The mRNA is cell-to-cell mobile. Lung seven transmembrane receptor family protein;(source:Araport11) Ipc02G0018470 AT1G05970.2 RNA-binding (RRM/RBD/RNP motifs) family protein Anti-silencing factor. Forms a complex with ASI1-EDM2 that is required for expression of some nonintronic HC-TRE genes RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc02G0018460 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0018450 AT2G37300.4 0 0 transmembrane protein;(source:Araport11) Ipc02G0018440 AT3G12620.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc02G0018430 AT5G02780.3 0 Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro. glutathione transferase lambda 1;(source:Araport11) Ipc02G0018420 AT5G02790.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc02G0018410 AT3G55020.1 Ypt/Rab-GAP domain of gyp1p superfamily protein 0 Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11) Ipc02G0018400 AT5G02810.1 pseudo-response regulator 7 PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY. pseudo-response regulator 7;(source:Araport11) Ipc02G0018390 AT3G09630.1 Ribosomal protein L4/L1 family 0 Ribosomal protein L4/L1 family;(source:Araport11) Ipc02G0018380 AT3G53470.2 0 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase;(source:Araport11) Ipc02G0018370 AT4G13590.2 Uncharacterized protein family (UPF0016) Chloroplast manganese transporter required for chloroplast manganese homeostasis and photosynthetic function. Uncharacterized protein family (UPF0016);(source:Araport11) Ipc02G0018360 AT2G20280.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc15G0003560 AT4G36930.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0003570 AT1G01540.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0003580 AT1G45688.1 0 CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress. transmembrane protein;(source:Araport11) Ipc15G0003590 AT1G45976.1 S-ribonuclease binding protein 1 0 S-ribonuclease binding protein 1;(source:Araport11) Ipc15G0003600 AT2G34090.3 maternal effect embryo arrest 18 0 maternal effect embryo arrest 18;(source:Araport11) Ipc15G0003610 AT1G46264.1 heat shock transcription factor B4 Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions. heat shock transcription factor B4;(source:Araport11) Ipc15G0003620 AT3G49180.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0003630 AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0003640 AT1G45207.3 0 0 Remorin family protein;(source:Araport11) Ipc15G0003650 AT5G42920.2 THO complex, subunit 5 Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. THO complex, subunit 5;(source:Araport11) Ipc15G0003660 AT1G45249.1 abscisic acid responsive elements-binding factor 2 Leucine zipper transcription factor that binds to the abscisic acid (ABA)–responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment. abscisic acid responsive elements-binding factor 2;(source:Araport11) Ipc15G0003670 AT1G45230.1 Protein of unknown function (DUF3223) 0 DCL protein (DUF3223);(source:Araport11) Ipc15G0003680 AT5G09890.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc15G0003690 AT4G17650.1 Polyketide cyclase / dehydrase and lipid transport protein 0 Polyketide cyclase / dehydrase and lipid transport protein;(source:Araport11) Ipc15G0003700 AT5G08305.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0003710 AT3G19270.2 0 Encodes a protein with ABA 8 Prime-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. cytochrome P450, family 707, subfamily A, polypeptide 4;(source:Araport11) Ipc15G0003720 AT1G45474.2 photosystem I light harvesting complex gene 5 Encodes a component of the light harvesting complex of photosystem I. photosystem I light harvesting complex protein 5;(source:Araport11) Ipc15G0003730 AT2G26570.2 0 Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity. WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827);(source:Araport11) Ipc15G0003740 AT1G66400.1 calmodulin like 23 Encodes a calmodulin-like protein. Regulates nitric oxide levels and transition to flowering. calmodulin like 23;(source:Araport11) Ipc15G0003750 AT5G42380.1 calmodulin like 37 0 calmodulin like 37;(source:Araport11) Ipc15G0003760 AT5G42750.1 BRI1 kinase inhibitor 1 Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1 through the evolutionarily conserved C-terminal BIM motif binding to the C-lobe of the BRI1 kinase domain. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1 by inhibiting the transphosphorylation to keep BRI1 at a basal level of activity. It is phosphorylated by BRI1 at Ser270 & Ser274 and at tyrosine site Tyr211 and dissociates from plasma membrane to end up in the cytosol after phosphorylation. Its loss-of-function mutant shows higher sensitivity to BR treatment. BRI1 kinase inhibitor 1;(source:Araport11) Ipc15G0003770 AT1G47380.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc15G0003780 AT4G33360.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc15G0003790 AT5G44250.1 Protein of unknown function DUF829, transmembrane 53 0 peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53);(source:Araport11) Ipc15G0003800 AT2G37560.1 origin recognition complex second largest subunit 2 Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits. origin recognition complex second largest subunit 2;(source:Araport11) Ipc15G0003810 AT4G33380.1 0 0 dimethylallyl, adenosine tRNA methylthiotransferase;(source:Araport11) Ipc15G0003820 AT1G47410.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0003830 AT2G26550.2 heme oxygenase 2 Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways. heme oxygenase 2;(source:Araport11) Ipc15G0003840 AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0003850 AT4G11800.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc15G0003860 AT1G47490.1 RNA-binding protein 47C 0 RNA-binding protein 47C;(source:Araport11) Ipc15G0003870 AT2G26540.1 uroporphyrinogen-III synthase family protein Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype uroporphyrinogen-III synthase family protein;(source:Araport11) Ipc15G0003880 AT5G42690.5 0 0 transcription factor, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc15G0003890 AT5G67300.1 myb domain protein r1 Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli. The mRNA is cell-to-cell mobile. myb domain protein r1;(source:Araport11) Ipc15G0003900 AT5G06430.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc15G0003910 AT2G34520.1 mitochondrial ribosomal protein S14 nuclear-encoded mitochondrial ribosomal protein S14 mitochondrial ribosomal protein S14;(source:Araport11) Ipc15G0003920 AT2G26510.1 Xanthine/uracil permease family protein Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter. Xanthine/uracil permease family protein;(source:Araport11) Ipc15G0003930 AT1G69850.1 nitrate transporter 1:2 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems. nitrate transporter 1:2;(source:Araport11) Ipc15G0003940 AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc15G0003950 AT1G47670.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc15G0003960 AT5G25900.1 GA requiring 3 Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway. GA requiring 3;(source:Araport11) Ipc15G0003970 AT4G37100.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc15G0003980 AT4G33280.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc15G0003990 AT4G33280.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc15G0004000 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc15G0004010 AT1G47550.1 exocyst complex component sec3A Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. It binds phosphoinositide lipids. exocyst complex component sec3A;(source:Araport11) Ipc15G0004020 AT1G74970.1 ribosomal protein S9 ribosomal protein S9, nuclear encoded component of the chloroplast ribosome ribosomal protein S9;(source:Araport11) Ipc15G0004030 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc15G0004040 AT4G36870.2 BEL1-like homeodomain 2 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves. BEL1-like homeodomain 2;(source:Araport11) Ipc15G0004050 AT1G19270.2 0 Encodes a ubiquitin-activated peptidase that is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. DA1;(source:Araport11) Ipc15G0004060 AT1G19300.1 Nucleotide-diphospho-sugar transferases superfamily protein The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc15G0004070 AT1G19310.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0004080 AT1G75000.1 GNS1/SUR4 membrane protein family ELO family protein. GNS1/SUR4 membrane protein family;(source:Araport11) Ipc15G0004090 AT1G75020.2 lysophosphatidyl acyltransferase 4 0 lysophosphatidyl acyltransferase 4;(source:Araport11) Ipc15G0004100 AT5G42610.1 Protein of unknown function (DUF607) 0 calcium uniporter (DUF607);(source:Araport11) Ipc15G0004110 AT1G19330.2 0 Evening-expressed key component of Sin3-HDAC complex, which bind directly to the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) and PSEUDO-RESPONSE REGULATOR 9 (PRR9) promoters and catalyze histone 3 (H3) deacetylation at the cognate regions to repress expression, allowing the declining phase of their expression at dusk. histone deacetylase complex subunit;(source:Araport11) Ipc15G0004120 AT3G18400.1 NAC domain containing protein 58 0 NAC domain containing protein 58;(source:Araport11) Ipc15G0004130 AT1G75080.2 Brassinosteroid signalling positive regulator (BZR1) family protein Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities. Brassinosteroid signaling positive regulator (BZR1) family protein;(source:Araport11) Ipc15G0004140 AT1G80950.2 0 Encodes an acyl-CoA: lysophosphatidylethanolamine acyltransferase with 16:0-CoA being the best acyl donor. Mutations adversely affect the growth of plants and result in decreased lipid content in roots and seeds. Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc15G0004150 AT1G47740.3 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc15G0004160 AT2G32360.1 Ubiquitin-like superfamily protein 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc15G0004170 AT3G50700.1 indeterminate(ID)-domain 2 zinc finger protein, similar to maize Indeterminate1 (ID1) indeterminate(ID)-domain 2;(source:Araport11) Ipc15G0004180 AT1G45150.1 0 0 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase;(source:Araport11) Ipc15G0004190 AT1G45160.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0004200 AT1G75150.2 0 0 DNA ligase-like protein;(source:Araport11) Ipc15G0004210 AT1G45170.1 0 0 outer envelope pore 24B-like protein;(source:Araport11) Ipc15G0004220 AT4G27650.3 0 Encodes Arabidopsis homolog of Drosophila pelota protein. Functions in RNA the non-stop decay (NSD) and no-go decay (NGD) quality control systems that act during translation. Eukaryotic release factor 1 (eRF1) family protein;(source:Araport11) Ipc15G0004230 AT3G56870.2 0 0 hypothetical protein;(source:Araport11) Ipc15G0004240 AT2G18500.1 ovate family protein 7 0 ovate family protein 7;(source:Araport11) Ipc15G0004250 AT4G36660.1 Protein of unknown function (DUF1195) 0 polyol transporter, putative (DUF1195);(source:Araport11) Ipc15G0004260 AT5G42950.1 GYF domain-containing protein EXA1 is a GYF domain-containing gene of the SMY2 subgroup. Mutants exhibit resistance to potexviruses. GYF domain-containing protein;(source:Araport11) Ipc15G0004270 AT4G38990.2 0 0 glycosyl hydrolase 9B16;(source:Araport11) Ipc15G0004280 AT2G16230.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc15G0004290 AT5G42710.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0004300 AT1G27620.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc15G0004310 AT1G75170.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc15G0004320 AT5G42760.1 Leucine carboxyl methyltransferase 0 Leucine carboxyl methyltransferase;(source:Araport11) Ipc15G0004330 AT5G42765.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc15G0004340 AT1G75210.3 0 0 HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11) Ipc15G0004350 AT2G16250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0004360 AT5G42770.3 0 0 Maf-like protein;(source:Araport11) Ipc15G0004370 AT1G19440.1 3-ketoacyl-CoA synthase 4 Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 4;(source:Araport11) Ipc15G0004380 AT1G75220.1 Major facilitator superfamily protein Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply. Major facilitator superfamily protein;(source:Araport11) Ipc15G0004390 AT1G75230.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc15G0004400 AT1G19520.1 pentatricopeptide (PPR) repeat-containing protein Ribosomal pentatricopeptide repeat protein pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc15G0004410 AT1G47271.1 Cystathionine beta-synthase (CBS) family protein 0 Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc15G0004420 AT2G18280.2 tubby like protein 2 Member of TLP family The mRNA is cell-to-cell mobile. tubby like protein 2;(source:Araport11) Ipc15G0004430 AT1G19530.2 0 0 DNA polymerase epsilon catalytic subunit A;(source:Araport11) Ipc15G0004440 AT5G42785.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0004450 AT2G21600.1 endoplasmatic reticulum retrieval protein 1B Key player of retrieval of ER membrane proteins The mRNA is cell-to-cell mobile. endoplasmatic reticulum retrieval protein 1B;(source:Araport11) Ipc15G0004460 AT1G47260.1 gamma carbonic anhydrase 2 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase 2;(source:Araport11) Ipc15G0004470 AT1G19600.1 pfkB-like carbohydrate kinase family protein 0 pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc15G0004480 AT1G75330.1 ornithine carbamoyltransferase 0 ornithine carbamoyltransferase;(source:Araport11) Ipc15G0004490 AT5G66460.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc15G0004500 AT1G27680.1 ADPGLC-PPase large subunit ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. The mRNA is cell-to-cell mobile. ADPGLC-PPase large subunit;(source:Araport11) Ipc15G0004510 AT1G75350.1 Ribosomal protein L31 0 Ribosomal protein L31;(source:Araport11) Ipc15G0004520 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc15G0004530 AT1G22100.1 Inositol-pentakisphosphate 2-kinase family protein 0 Inositol-pentakisphosphate 2-kinase family protein;(source:Araport11) Ipc15G0004540 AT3G50930.1 cytochrome BC1 synthesis Encodes a protein that is present in a homo-multimeric protein complex on the outer mitochondrial membrane and plays a role in cell death and amplifying salicylic acid signalling. The mRNA is cell-to-cell mobile. cytochrome BC1 synthesi;(source:Araport11) Ipc15G0004550 AT1G19660.2 Wound-responsive family protein 0 Wound-responsive family protein;(source:Araport11) Ipc15G0004560 AT1G10210.3 0 Encodes ATMPK1. mitogen-activated protein kinase 1;(source:Araport11) Ipc15G0004570 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc15G0004580 AT1G45000.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc15G0004590 AT1G44970.1 Peroxidase superfamily protein Encodes a class III peroxidase that is genetically redundant with PRX40, expressed in the tapetum, and essential for proper anther and pollen development. Peroxidase superfamily protein;(source:Araport11) Ipc15G0004600 AT5G57960.1 GTP-binding protein, HflX 0 GTP-binding protein, HflX;(source:Araport11) Ipc15G0004610 AT1G75430.1 BEL1-like homeodomain 11 0 BEL1-like homeodomain 11;(source:Araport11) Ipc15G0004620 AT1G75410.2 BEL1-like homeodomain 3 BEL1-like homeodomain 3 (BLH3) BEL1-like homeodomain 3;(source:Araport11) Ipc15G0004630 AT2G47990.1 transducin family protein / WD-40 repeat family protein Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc15G0004640 AT4G36360.1 beta-galactosidase 3 putative beta-galactosidase (BGAL3 gene) beta-galactosidase 3;(source:Araport11) Ipc15G0004650 AT5G18570.1 GTP1/OBG family protein Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis and functions primarily in plastid ribosome biogenesis during chloroplast development. GTP1/OBG family protein;(source:Araport11) Ipc15G0004660 AT1G75490.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0004670 AT5G45790.2 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc15G0004680 AT1G75500.2 Walls Are Thin 1 An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3) and the nodulin MtN21-like transporter family. Walls Are Thin 1;(source:Araport11) Ipc15G0004690 AT5G42830.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc15G0004700 AT4G39090.1 Papain family cysteine protease Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R–mediated resistance response. Papain family cysteine protease;(source:Araport11) Ipc15G0004710 AT4G39080.1 vacuolar proton ATPase A3 Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast. The mRNA is cell-to-cell mobile. vacuolar proton ATPase A3;(source:Araport11) Ipc15G0004720 AT1G62020.1 Coatomer, alpha subunit 0 Coatomer, alpha subunit;(source:Araport11) Ipc15G0004730 AT1G75540.1 salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile. salt tolerance homolog2;(source:Araport11) Ipc15G0004740 AT3G49990.1 0 0 Low temperature viability protein;(source:Araport11) Ipc15G0004750 AT2G21300.5 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc15G0004760 AT4G24160.1 alpha/beta-Hydrolases superfamily protein Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0004770 AT4G24160.1 alpha/beta-Hydrolases superfamily protein Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc15G0004780 AT1G19910.1 ATPase, F0/V0 complex, subunit C protein vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc15G0004790 AT1G75620.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc15G0004800 AT4G38900.3 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc15G0004810 AT1G19870.1 IQ-domain 32 Encodes a microtubule-associated protein. IQ-domain 32;(source:Araport11) Ipc15G0004820 AT5G39590.1 TLD-domain containing nucleolar protein 0 TLD-domain containing nucleolar protein;(source:Araport11) Ipc15G0004830 AT1G75590.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0004840 AT1G19835.6 0 TCS1 encodes a coiled-coil domain protein that binds to microtubules and co-localizes with the cortical microtubules. Mutants have defects in trichome branching and hypocotyl elongation. TCS1 interacts with ZWI and appears to be involved in microtubule assembly. filament-like protein (DUF869);(source:Araport11) Ipc15G0004850 AT4G34760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0004860 AT2G37210.1 lysine decarboxylase family protein Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. lysine decarboxylase family protein;(source:Araport11) Ipc15G0004870 AT1G19940.2 0 0 glycosyl hydrolase 9B5;(source:Araport11) Ipc15G0004880 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc15G0004890 AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc15G0004900 AT5G42560.1 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0 Abscisic acid-responsive (TB2/DP1, HVA22) family protein;(source:Araport11) Ipc15G0004910 AT2G45730.1 eukaryotic initiation factor 3 gamma subunit family protein 0 eukaryotic initiation factor 3 gamma subunit family protein;(source:Araport11) Ipc15G0004920 AT2G44040.1 Dihydrodipicolinate reductase, bacterial/plant 0 Dihydrodipicolinate reductase, bacterial/plant;(source:Araport11) Ipc15G0004930 AT1G75710.1 C2H2-like zinc finger protein 0 C2H2-like zinc finger protein;(source:Araport11) Ipc15G0004940 AT1G75717.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0004950 AT1G47830.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc15G0004960 AT1G75760.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc15G0004970 AT1G53025.2 0 0 Ubiquitin-conjugating enzyme family protein;(source:Araport11) Ipc15G0004980 AT1G75780.1 tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain;(source:Araport11) Ipc15G0004990 AT5G42470.1 0 0 BRCA1-A complex subunit BRE-like protein;(source:Araport11) Ipc15G0005000 AT3G06880.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0005010 AT1G30755.6 0 0 elongation factor G, putative (DUF668);(source:Araport11) Ipc15G0005020 AT1G75790.1 SKU5 similar 18 0 SKU5 similar 18;(source:Araport11) Ipc15G0005030 AT2G17880.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc15G0005040 AT1G75800.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc15G0005050 AT4G24180.6 0 Root-specific expression activated in response to rhizobacteria and ACC. Role in induced systemic resistance. THAUMATIN-LIKE PROTEIN 1;(source:Araport11) Ipc15G0005060 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0005070 AT1G75810.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0005080 AT4G16630.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc15G0005090 AT4G24200.2 0 0 Transcription elongation factor (TFIIS) family protein;(source:Araport11) Ipc15G0005100 AT1G20080.5 0 Encodes a synaptotagmin localized on the Golgi apparatus and that regulates protein secretion via the unconventional protein transport from the cytosol to the extracellular matrix in plant cells. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc15G0005110 AT3G21570.1 0 0 proline-rich nuclear receptor coactivator;(source:Araport11) Ipc15G0005120 AT1G20100.1 0 0 DNA ligase-like protein;(source:Araport11) Ipc15G0005130 AT1G75900.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0005140 AT1G75950.1 S phase kinase-associated protein 1 SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile. S phase kinase-associated protein 1;(source:Araport11) Ipc15G0005150 AT1G20160.1 Subtilisin-like serine endopeptidase family protein Encodes two isoforms. One (SBT5.2(a) ) is a secreted, cell wall localized subtilisin-like serine protease that is involved in regulation of stomatal development. The second isoform (SBT5.2(b) is localized to endosomes. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc15G0005160 AT1G20160.1 Subtilisin-like serine endopeptidase family protein Encodes two isoforms. One (SBT5.2(a) ) is a secreted, cell wall localized subtilisin-like serine protease that is involved in regulation of stomatal development. The second isoform (SBT5.2(b) is localized to endosomes. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc15G0005170 AT5G66100.1 winged-helix DNA-binding transcription factor family protein Encodes a LAM domain containing protein that is involved in leaf senescence. winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc15G0005180 AT5G42180.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc15G0005190 AT1G20190.1 expansin 11 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin 11;(source:Araport11) Ipc15G0005200 AT1G20225.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc15G0005210 AT5G42200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0005220 AT1G60420.1 DC1 domain-containing protein Reduce transmission through pollen. The mRNA is cell-to-cell mobile. DC1 domain-containing protein;(source:Araport11) Ipc15G0005230 AT1G76040.2 calcium-dependent protein kinase 29 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29;(source:Araport11) Ipc15G0005240 AT1G31420.2 Leucine-rich repeat protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0005250 AT2G35615.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005260 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005270 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005280 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005290 AT1G20160.1 Subtilisin-like serine endopeptidase family protein Encodes two isoforms. One (SBT5.2(a) ) is a secreted, cell wall localized subtilisin-like serine protease that is involved in regulation of stomatal development. The second isoform (SBT5.2(b) is localized to endosomes. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc15G0005300 AT4G13990.2 0 0 Exostosin family protein;(source:Araport11) Ipc15G0005310 AT4G19460.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc15G0005320 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005330 AT5G33340.1 Eukaryotic aspartyl protease family protein Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0005340 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc15G0005350 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc15G0005360 AT1G30670.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0005370 AT1G31650.1 RHO guanyl-nucleotide exchange factor 14 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. RHO guanyl-nucleotide exchange factor 14;(source:Araport11) Ipc15G0005380 AT5G38530.1 tryptophan synthase beta type 2 TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels. tryptophan synthase beta type 2;(source:Araport11) Ipc15G0005390 AT5G45310.2 0 0 coiled-coil protein;(source:Araport11) Ipc15G0005400 AT5G45320.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc15G0005410 AT4G19380.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc15G0005420 AT1G31720.2 0 0 chitin synthase, putative (DUF1218);(source:Araport11) Ipc15G0005430 AT4G19350.1 embryo defective 3006 0 embryo defective 3006;(source:Araport11) Ipc15G0005440 AT4G19230.1 cytochrome P450, family 707, subfamily A, polypeptide 1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. cytochrome P450, family 707, subfamily A, polypeptide 1;(source:Araport11) Ipc15G0005450 AT1G79620.1 Leucine-rich repeat protein kinase family protein VRLK1 is a LRR kinase involved in switching between cell elongation and secondary cell wall thickening.VRLK1 is a member of a gene family that includes a small number of recently duplicated paralogs. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0005460 AT2G35610.1 xyloglucanase 113 Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells. xyloglucanase 113;(source:Araport11) Ipc15G0005470 AT4G19210.1 RNAse l inhibitor protein 2 member of RLI subfamily The mRNA is cell-to-cell mobile. RNAse l inhibitor protein 2;(source:Araport11) Ipc15G0005480 AT2G41420.1 proline-rich family protein 0 proline-rich family protein;(source:Araport11) Ipc15G0005490 AT5G45360.1 F-box family protein Encodes a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins. F-box family protein;(source:Araport11) Ipc15G0005500 AT1G31770.1 ATP-binding cassette 14 0 ATP-binding cassette 14;(source:Araport11) Ipc15G0005510 AT5G08460.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc15G0005520 AT1G31780.1 0 0 oligomeric golgi complex subunit;(source:Araport11) Ipc15G0005530 AT1G31790.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0005540 AT3G56150.2 eukaryotic translation initiation factor 3C member of eIF3c - eukaryotic initiation factor 3c eukaryotic translation initiation factor 3C;(source:Araport11) Ipc15G0005550 AT4G19160.2 0 0 transglutaminase family protein;(source:Araport11) Ipc15G0005560 AT3G45890.1 Protein of unknown function, DUF647 Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB. root UVB sensitive-like protein (Protein of unknown function, DUF647);(source:Araport11) Ipc15G0005570 AT3G45880.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc15G0005580 AT3G22370.1 alternative oxidase 1A Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response. The mRNA is cell-to-cell mobile. alternative oxidase 1A;(source:Araport11) Ipc15G0005590 AT5G45380.1 solute:sodium symporters;urea transmembrane transporters 0 urea-proton symporter DEGRADATION OF UREA 3 (DUR3);(source:Araport11) Ipc01G0027990 #N/A #N/A #N/A #N/A Ipc01G0028000 AT3G22380.3 0 Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. Also shown to be invoved in the maintenance of Arabidopsis thaliana metabolic homeostasis. time for coffee;(source:Araport11) Ipc01G0028020 AT5G26340.1 Major facilitator superfamily protein Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD. Major facilitator superfamily protein;(source:Araport11) Ipc01G0028030 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc02G0006410 AT5G14860.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc02G0006400 AT2G35550.4 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc02G0006390 AT3G19990.1 0 0 E3 ubiquitin-protein ligase;(source:Araport11) Ipc02G0006380 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc02G0006370 AT2G28290.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0006360 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc02G0006350 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0006340 #N/A #N/A #N/A #N/A Ipc05G0019900 AT4G11400.2 0 0 ARID/BRIGHT DNA-binding , ELM2 domain and myb-like DNA-binding domain-containing protein;(source:Araport11) Ipc05G0019890 AT1G63800.1 ubiquitin-conjugating enzyme 5 0 ubiquitin-conjugating enzyme 5;(source:Araport11) Ipc05G0019870 AT1G63770.7 0 0 Peptidase M1 family protein;(source:Araport11) Ipc05G0019880 AT1G63770.6 0 0 Peptidase M1 family protein;(source:Araport11) Ipc05G0019860 AT5G52430.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc05G0019850 AT4G00360.1 cytochrome P450, family 86, subfamily A, polypeptide 2 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems. cytochrome P450, family 86, subfamily A, polypeptide 2;(source:Araport11) Ipc05G0019830 AT2G05320.1 beta-1,2-N-acetylglucosaminyltransferase II 0 beta-1,2-N-acetylglucosaminyltransferase II;(source:Araport11) Ipc05G0019840 AT4G00430.1 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1;(source:Araport11) Ipc05G0019820 AT1G63690.1 SIGNAL PEPTIDE PEPTIDASE-LIKE 2 0 SIGNAL PEPTIDE PEPTIDASE-LIKE 2;(source:Araport11) Ipc05G0019810 AT1G58230.1 binding 0 binding protein;(source:Araport11) Ipc05G0019800 AT3G24503.1 aldehyde dehydrogenase 2C4 Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively aldehyde dehydrogenase 2C4;(source:Araport11) Ipc05G0019790 AT3G24503.1 aldehyde dehydrogenase 2C4 Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively aldehyde dehydrogenase 2C4;(source:Araport11) Ipc05G0019780 AT5G19610.1 GNOM-like 2 0 GNOM-like 2;(source:Araport11) Ipc05G0019770 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc05G0019760 AT3G24460.2 0 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc05G0019750 AT4G13350.2 NSP (nuclear shuttle protein)-interacting GTPase Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection. NSP (nuclear shuttle protein)-interacting GTPase;(source:Araport11) Ipc05G0019740 ATCG00540.1 photosynthetic electron transfer A Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. photosynthetic electron transfer A;(source:Araport11) Ipc05G0019730 ATCG00560.1 photosystem II reaction center protein L PSII L protein photosystem II reaction center protein L;(source:Araport11) Ipc05G0019720 AT3G24450.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc05G0019710 AT3G24440.1 Fibronectin type III domain-containing protein Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM. Fibronectin type III domain-containing protein;(source:Araport11) Ipc05G0019700 AT3G24430.1 ATP binding Encodes chloroplast protein HCF101 (high chlorophyll fluorescence 101). Serves as a chloroplast scaffold protein that specifically assembles [4Fe-4S] clusters and transfers them to the chloroplast membrane and soluble target proteins. ATP binding protein;(source:Araport11) Ipc05G0019690 AT4G13360.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc05G0019680 AT4G13400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0019670 AT4G13395.1 ROTUNDIFOLIA like 12 0 ROTUNDIFOLIA like 12;(source:Araport11) Ipc05G0019660 AT3G56120.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0019650 AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein 0 Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc05G0019640 AT1G08510.1 fatty acyl-ACP thioesterases B Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer. fatty acyl-ACP thioesterases B;(source:Araport11) Ipc05G0019630 AT4G32600.2 0 0 C3H4 type zinc finger protein;(source:Araport11) Ipc05G0019620 AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc05G0019610 AT4G13370.1 Plant protein of unknown function (DUF936) Member of a novel, plant specific family of microtubule associated proteins. serine/arginine repetitive matrix protein, putative (DUF936);(source:Araport11) Ipc05G0019600 AT3G24350.1 syntaxin of plants 32 member of Glycoside Hydrolase Family 17 syntaxin of plants 32;(source:Araport11) Ipc05G0019590 AT4G02990.2 0 Encodes BELAYA SMERT (BSM), a plastid-localized protein homologous to mitochondrial transcription termination factors (mTERF) found in animal. Mutant bsm cells are albino, are compromised in growth, and suffer defects in global plastidic gene expression.The mRNA is cell-to-cell mobile. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc05G0019580 AT3G24550.1 proline extensin-like receptor kinase 1 Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). The mRNA is cell-to-cell mobile. proline extensin-like receptor kinase 1;(source:Araport11) Ipc05G0019570 AT5G23060.1 calcium sensing receptor Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium. calcium sensing receptor;(source:Araport11) Ipc05G0019560 AT5G21222.4 0 0 protein kinase family protein;(source:Araport11) Ipc05G0019550 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0019540 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0019530 AT2G18290.1 anaphase promoting complex 10 Encodes APC10 (anaphase promoting complex 10). Overexpression of APC10 likely mimics auxin and ethylene sensitive phenotypes. Plays an essential role in cell proliferation during leaf development. anaphase promoting complex 10;(source:Araport11) Ipc05G0019520 AT2G01650.3 0 encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo. plant UBX domain-containing protein 2;(source:Araport11) Ipc05G0019510 AT2G20120.2 0 Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles. CONTINUOUS VASCULAR RING protein (DUF502);(source:Araport11) Ipc05G0019500 AT3G22170.2 far-red elongated hypocotyls 3 A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. far-red elongated hypocotyls 3;(source:Araport11) Ipc05G0019490 AT4G27090.1 Ribosomal protein L14 0 Ribosomal protein L14;(source:Araport11) Ipc05G0019480 AT4G29010.1 Enoyl-CoA hydratase/isomerase family Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. Enoyl-CoA hydratase/isomerase family;(source:Araport11) Ipc05G0019470 AT4G29000.1 Tesmin/TSO1-like CXC domain-containing protein 0 Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11) Ipc05G0019460 AT4G28990.1 RNA-binding protein-related 0 RNA-binding protein-like protein;(source:Araport11) Ipc05G0019450 AT3G06880.2 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc05G0019440 AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0007610 AT4G32280.1 indole-3-acetic acid inducible 29 0 indole-3-acetic acid inducible 29;(source:Araport11) Ipc08G0007620 AT3G15880.4 0 0 WUS-interacting protein 2;(source:Araport11) Ipc08G0007630 AT2G21500.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0007640 AT1G30860.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0007650 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc08G0007660 AT1G15690.1 Inorganic H pyrophosphatase family protein Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1. The mRNA is cell-to-cell mobile. Inorganic H pyrophosphatase family protein;(source:Araport11) Ipc08G0007670 AT3G26115.3 0 0 Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc08G0007680 AT1G24650.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0007690 AT1G15710.1 prephenate dehydrogenase family protein 0 prephenate dehydrogenase family protein;(source:Araport11) Ipc08G0007700 AT5G34940.2 glucuronidase 3 The protein is predicted (WoLF PSORT program) to be membrane-associated. glucuronidase 3;(source:Araport11) Ipc08G0007710 AT5G23890.2 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc08G0007720 AT3G46616.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0007730 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc08G0007740 AT4G31570.6 0 0 nucleoporin;(source:Araport11) Ipc08G0007750 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0007760 AT2G11910.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0007770 AT1G10340.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0007780 AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. The mRNA is cell-to-cell mobile. Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11) Ipc08G0007790 AT2G28000.1 chaperonin-60alpha Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. The mRNA is cell-to-cell mobile. chaperonin-60alpha;(source:Araport11) Ipc07G0007260 AT1G24220.2 0 0 paired amphipathic helix repeat-containing protein;(source:Araport11) Ipc07G0007250 #N/A #N/A #N/A #N/A Ipc07G0007240 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007230 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007220 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007210 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007200 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007190 AT3G26330.1 cytochrome P450, family 71, subfamily B, polypeptide 37 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 37;(source:Araport11) Ipc07G0007180 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007170 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007160 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007150 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007140 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007130 AT4G04700.1 calcium-dependent protein kinase 27 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 27;(source:Araport11) Ipc07G0007120 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007110 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0007100 AT3G26300.1 cytochrome P450, family 71, subfamily B, polypeptide 34 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 34;(source:Araport11) Ipc07G0007090 AT4G31810.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0 ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11) Ipc07G0007080 AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity. Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein;(source:Araport11) Ipc07G0007070 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0007060 AT4G19275.1 0 0 galactose oxidase/kelch repeat protein;(source:Araport11) Ipc07G0007050 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0007040 AT3G21352.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0007030 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0007020 AT4G32440.3 Plant Tudor-like RNA-binding protein 0 Plant Tudor-like RNA-binding protein;(source:Araport11) Ipc07G0007010 AT5G11420.1 Protein of unknown function, DUF642 0 transmembrane protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc07G0007000 AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc07G0006990 AT5G11380.1 1-deoxy-D-xylulose 5-phosphate synthase 3 Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. 1-deoxy-D-xylulose 5-phosphate synthase 3;(source:Araport11) Ipc07G0006980 AT5G17530.5 0 0 phosphoglucosamine mutase family protein;(source:Araport11) Ipc07G0006970 AT4G30380.2 0 Encodes a Plant Natriuretic Peptide (PNP). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. Barwin-related endoglucanase;(source:Araport11) Ipc07G0006960 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc07G0006950 AT5G11330.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc07G0006940 AT5G11330.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc07G0006930 AT3G08770.1 lipid transfer protein 6 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 6;(source:Araport11) Ipc07G0006920 AT2G38530.1 lipid transfer protein 2 Involved in lipid transfer between membranes and plays a role in maintaining the integrity of the cuticle-cell wall interface. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. lipid transfer protein 2;(source:Araport11) Ipc07G0006910 AT4G29250.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0006900 AT1G15520.1 pleiotropic drug resistance 12 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc07G0006890 AT1G72040.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0006880 AT1G72020.1 0 0 TonB-dependent heme receptor A;(source:Araport11) Ipc07G0006870 AT4G09510.1 cytosolic invertase 2 CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues. cytosolic invertase 2;(source:Araport11) Ipc07G0006860 AT2G03870.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc07G0006850 AT2G33800.1 Ribosomal protein S5 family protein Encodes SCABRA1 (SCA1), a nuclear gene encoding a plastid-type ribosomal protein that functions 
as a structural component of the 70S plastid ribosome. The sca1-rps5 allele exhibits defects in plastid 16SrRNA processing and a resulting decrease in accumulation of photosynthetic proteins. Loss-of-function mutations enhance the polarity defects of the as2 mutants. Ribosomal protein S5 family protein;(source:Araport11) Ipc07G0006840 AT2G25620.2 0 Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses. DNA-binding protein phosphatase 1;(source:Araport11) Ipc07G0006830 AT2G25625.1 0 0 histone deacetylase-like protein;(source:Araport11) Ipc07G0006820 #N/A #N/A #N/A #N/A Ipc07G0006810 AT2G30440.1 thylakoid processing peptide Encodes a thylakoidal processing peptidase that removes signal sequences from proteins synthesized in the cytoplasm and transported into the thylakoid lumen. The mRNA is cell-to-cell mobile. thylakoid processing peptide;(source:Araport11) Ipc07G0006800 AT5G11320.1 Flavin-binding monooxygenase family protein Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase. YUC4 is part of a pathway linking auxin biosynthesis and gynoecium development. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc07G0006790 AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. transcriptional corepressor LEUNIG;(source:Araport11) Ipc07G0006780 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006770 AT1G50180.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0006760 AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. transcriptional corepressor LEUNIG;(source:Araport11) Ipc07G0006750 AT1G15550.1 gibberellin 3-oxidase 1 Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback). gibberellin 3-oxidase 1;(source:Araport11) Ipc07G0006740 AT4G32570.1 TIFY domain protein 8 0 TIFY domain protein 8;(source:Araport11) Ipc07G0006730 AT2G26910.1 pleiotropic drug resistance 4 Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle. pleiotropic drug resistance 4;(source:Araport11) Ipc07G0006720 AT5G11300.1 mitotic-like cyclin 3B from Arabidopsis mitotic-like cyclin, core cell cycle gene that is expressed only in roots (RT_PCR), portions with mitotic activity only (whole mount in situ). mitotic-like cyclin 3B from Arabidopsi;(source:Araport11) Ipc07G0006710 AT3G52320.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0006700 AT3G04660.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc07G0006690 AT1G72840.1 Disease resistance protein (TIR-NBS-LRR class) 0 Disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc07G0006680 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0006670 AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein encodes a major leaf ferredoxin 2Fe-2S ferredoxin-like superfamily protein;(source:Araport11) Ipc07G0006660 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006650 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006640 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006630 AT2G18660.1 plant natriuretic peptide A Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. It is stress responsive and can enhance its own expression. plant natriuretic peptide A;(source:Araport11) Ipc07G0006620 AT3G24350.1 syntaxin of plants 32 member of Glycoside Hydrolase Family 17 syntaxin of plants 32;(source:Araport11) Ipc07G0006610 AT4G32620.1 Enhancer of polycomb-like transcription factor protein Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing. Enhancer of polycomb-like transcription factor protein;(source:Araport11) Ipc07G0006600 AT4G13350.2 NSP (nuclear shuttle protein)-interacting GTPase Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection. NSP (nuclear shuttle protein)-interacting GTPase;(source:Araport11) Ipc07G0006590 AT1G12663.1 0 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. thionin-like protein;(source:Araport11) Ipc07G0006580 AT1G12660.1 0 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. thionin-like protein;(source:Araport11) Ipc07G0006570 AT2G25680.1 molybdate transporter 1 Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium. molybdate transporter 1;(source:Araport11) Ipc07G0006560 AT2G25690.2 Protein of unknown function (DUF581) 0 DUF581 family protein, putative (DUF581);(source:Araport11) Ipc07G0006550 AT4G32650.3 potassium channel in Arabidopsis thaliana 3 Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium channel protein;(source:Araport11) Ipc07G0006540 AT4G32650.3 potassium channel in Arabidopsis thaliana 3 Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium channel protein;(source:Araport11) Ipc07G0006530 AT4G32650.2 potassium channel in Arabidopsis thaliana 3 Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium channel protein;(source:Araport11) Ipc07G0006520 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006480 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006510 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006500 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006490 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006470 AT5G43470.4 0 Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006460 AT5G48620.6 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc07G0006450 AT3G46730.1 NB-ARC domain-containing disease resistance protein 0 NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0006440 AT5G48310.1 0 Protein of unknown function that may be involved in stress response. Strongly expressed in vascular tissues.Mutants are ABA- insensitive. portal protein;(source:Araport11) Ipc07G0006430 AT4G32680.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0006420 AT5G18390.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0006410 AT3G22440.1 FRIGIDA-like protein 0 FRIGIDA-like protein;(source:Araport11) Ipc07G0006400 AT4G31460.1 Ribosomal L28 family 0 Ribosomal L28 family;(source:Araport11) Ipc07G0006390 AT4G32660.3 Protein kinase superfamily protein Encodes protein kinase AME3. Protein kinase superfamily protein;(source:Araport11) Ipc07G0006380 AT2G40270.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc07G0006370 AT4G32690.1 hemoglobin 3 Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast. hemoglobin 3;(source:Araport11) Ipc07G0006360 AT5G25590.1 Protein of unknown function (DUF630 and DUF632) 0 DNA ligase (DUF630 and DUF632);(source:Araport11) Ipc07G0006350 AT5G25610.1 BURP domain-containing protein responsive to dehydration 22 (RD22) mediated by ABA BURP domain-containing protein;(source:Araport11) Ipc07G0006340 AT5G25620.1 Flavin-binding monooxygenase family protein Encodes a member of a family of flavin monooxygenases with an important role in auxin biosynthesis. YUC6 possesses an additional thiol-reductase activity that confers drought resistance independently of auxin biosynthesis. Flavin-binding monooxygenase family protein;(source:Araport11) Ipc07G0006330 AT1G03670.1 ankyrin repeat family protein Ankyrin repeat containing protein ankyrin repeat family protein;(source:Araport11) Ipc07G0006320 AT1G30890.2 Integral membrane HRF1 family protein 0 Integral membrane HRF1 family protein;(source:Araport11) Ipc07G0006310 AT5G19650.1 ovate family protein 8 0 ovate family protein 8;(source:Araport11) Ipc07G0006300 AT4G03490.4 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0006290 AT1G03670.1 ankyrin repeat family protein Ankyrin repeat containing protein ankyrin repeat family protein;(source:Araport11) Ipc07G0006280 AT2G15690.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes an atypical PPR-DYW protein containing five predicted PPR domains and a C-terminal DYW domain separated by an amino acid sequence that do not clearly correspond to an E domain. It is expressed in both the mitochondrion and chloroplast and is also involved in RNA editing in the mitochondrion and chloroplast as a core member of E+-type PPR editosomes. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0006270 AT4G03460.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0006260 AT4G03490.3 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0006250 AT2G43810.3 0 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc07G0006240 AT5G11490.1 adaptin family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. adaptin family protein;(source:Araport11) Ipc07G0006230 AT3G24570.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc07G0006220 AT1G01150.3 0 0 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc07G0006210 AT5G25630.3 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0006200 AT2G25737.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc07G0006190 AT5G11500.1 0 0 coiled-coil protein;(source:Araport11) Ipc07G0006180 AT4G32720.2 La protein 1 Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis. La protein 1;(source:Araport11) Ipc07G0006170 AT5G11520.1 aspartate aminotransferase 3 Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3;(source:Araport11) Ipc07G0006160 AT1G22440.1 Zinc-binding alcohol dehydrogenase family protein 0 Zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc07G0006150 AT4G29010.1 Enoyl-CoA hydratase/isomerase family Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. Enoyl-CoA hydratase/isomerase family;(source:Araport11) Ipc07G0006140 AT4G29010.1 Enoyl-CoA hydratase/isomerase family Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. Enoyl-CoA hydratase/isomerase family;(source:Araport11) Ipc07G0006130 AT4G29010.1 Enoyl-CoA hydratase/isomerase family Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities. Enoyl-CoA hydratase/isomerase family;(source:Araport11) Ipc07G0006120 AT5G11530.3 0 Involved in regulating reproductive development embryonic flower 1 (EMF1);(source:Araport11) Ipc07G0006110 AT5G11530.3 0 Involved in regulating reproductive development embryonic flower 1 (EMF1);(source:Araport11) Ipc06G0018010 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0018420 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc14G0018430 AT1G17500.2 0 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc14G0018440 AT2G07675.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) Ipc14G0019590 AT3G47890.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc04G0001790 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001800 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc04G0001810 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0024830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0019080 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc04G0001820 AT1G14910.2 0 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc04G0001830 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc04G0001840 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc04G0001850 AT1G28350.3 0 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc04G0001860 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc04G0001870 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0001880 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001890 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0011810 AT2G23810.1 tetraspanin8 Member of TETRASPANIN family tetraspanin8;(source:Araport11) Ipc10G0011800 AT1G67170.2 0 0 sarcolemmal membrane-associated protein;(source:Araport11) Ipc10G0011790 #N/A #N/A #N/A #N/A Ipc10G0011780 AT2G23820.2 Metal-dependent phosphohydrolase 0 Metal-dependent phosphohydrolase;(source:Araport11) Ipc10G0011770 AT2G23890.1 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase 0 HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11) Ipc10G0011760 AT2G23910.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0011750 AT4G28070.2 AFG1-like ATPase family protein 0 AFG1-like ATPase family protein;(source:Araport11) Ipc10G0011740 AT3G26618.1 eukaryotic release factor 1-3 0 eukaryotic release factor 1-3;(source:Araport11) Ipc10G0011730 AT2G23950.1 Leucine-rich repeat protein kinase family protein Encodes an LLR receptor kinase that is expressed in protophloem and is required for CLE peptide sensing in roots. One of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that acts as a co-regulator and has essential roles in regulating CLV3-mediated stem cell homeostasis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0011720 AT3G02470.4 S-adenosylmethionine decarboxylase Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis. S-adenosylmethionine decarboxylase;(source:Araport11) Ipc10G0011710 AT3G02470.4 S-adenosylmethionine decarboxylase Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis. S-adenosylmethionine decarboxylase;(source:Araport11) Ipc10G0011700 AT3G49010.7 0 Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1). breast basic conserved 1;(source:Araport11) Ipc10G0011690 AT1G17890.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0011680 AT2G23970.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc10G0011670 AT4G30860.1 SET domain group 4 Encodes a member of the trxG protein family. Contains a SET domain which is known to be involved in modification of histone tails by methylation. Interacts physically with AMS, but the implications of this interaction are unknown.Overexpression results in plieotrophic developmental defects. SET domain group 4;(source:Araport11) Ipc10G0011660 AT1G16060.1 ARIA-interacting double AP2 domain protein Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth. ARIA-interacting double AP2 domain protein;(source:Araport11) Ipc10G0011650 AT4G30850.2 heptahelical transmembrane protein2 heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors heptahelical transmembrane protein2;(source:Araport11) Ipc10G0011640 AT4G30845.1 0 0 DNA-directed RNA polymerase subunit beta;(source:Araport11) Ipc10G0011630 AT1G67070.2 0 Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene Primes expression pattern is responding to the level of sugar in the cell. Mannose-6-phosphate isomerase, type I;(source:Araport11) Ipc10G0011620 AT2G24090.1 Ribosomal protein L35 0 Ribosomal protein L35;(source:Araport11) Ipc10G0011610 AT1G10330.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0011600 AT5G57820.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc10G0011590 AT4G30790.1 0 Encodes autophagy-related 2 (ATG11) autophagy-like protein;(source:Araport11) Ipc10G0011580 AT3G60130.1 beta glucosidase 16 0 beta glucosidase 16;(source:Araport11) Ipc10G0011570 AT4G30720.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc10G0011560 AT3G50170.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc10G0011550 AT5G17420.1 Cellulose synthase family protein Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181). IRX3 is required for secondary cell wall biosynthesis. Cellulose synthase family protein;(source:Araport11) Ipc10G0011540 AT3G25280.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0011530 AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein Encodes a putative eukaryotic translation initiation factor The mRNA is cell-to-cell mobile. MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc10G0011520 AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase;(source:Araport11) Ipc10G0011510 AT2G24030.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0011500 AT4G30630.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0011490 AT2G24020.1 Uncharacterised BCR, YbaB family COG0718 STIC2 was identifided in a screen for suppressors of chloroplast protein import defect in tic40. Putative BCR, YbaB family COG0718;(source:Araport11) Ipc10G0011480 AT4G30610.1 alpha/beta-Hydrolases superfamily protein Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0011470 AT5G10840.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc10G0011460 AT4G30900.3 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0011450 AT4G30920.1 Cytosol aminopeptidase family protein Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover. Cytosol aminopeptidase family protein;(source:Araport11) Ipc10G0011440 AT4G30920.1 Cytosol aminopeptidase family protein Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover. Cytosol aminopeptidase family protein;(source:Araport11) Ipc10G0011430 AT4G30920.1 Cytosol aminopeptidase family protein Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover. Cytosol aminopeptidase family protein;(source:Araport11) Ipc10G0011420 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc10G0011410 AT2G24230.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0011400 AT1G33390.2 0 Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain). RNA helicase family protein;(source:Araport11) Ipc10G0011390 AT2G24240.1 BTB/POZ domain with WD40/YVTN repeat-like protein 0 BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11) Ipc10G0011380 AT4G30950.1 fatty acid desaturase 6 Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition. fatty acid desaturase 6;(source:Araport11) Ipc10G0011370 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc10G0011360 AT5G58160.1 actin binding 0 actin binding protein;(source:Araport11) Ipc10G0011350 AT5G58000.2 0 0 Reticulon family protein;(source:Araport11) Ipc10G0011340 AT4G30960.1 SOS3-interacting protein 3 Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile. SOS3-interacting protein 3;(source:Araport11) Ipc10G0011330 AT2G24260.2 0 Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair and sperm cell development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3). LJRHL1-like 1;(source:Araport11) Ipc10G0011320 AT2G24270.3 aldehyde dehydrogenase 11A3 Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity. aldehyde dehydrogenase 11A3;(source:Araport11) Ipc10G0011310 AT5G58020.1 0 Encodes a replication termination factor 2 domain containing protein involved in the regulation of pre-mRNA splicing. RTF2 RING-finger protein;(source:Araport11) Ipc10G0011300 AT5G58030.1 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc10G0011290 AT5G58040.2 0 Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA.The mRNA is cell-to-cell mobile. FIP1[V]-like protein;(source:Araport11) Ipc10G0011280 AT5G45140.2 0 Encodes a subunit of RNA polymerase III (aka RNA polymerase C). nuclear RNA polymerase C2;(source:Araport11) Ipc10G0011270 AT2G33550.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc10G0011260 AT5G58060.1 SNARE-like superfamily protein member of YKT6 Gene Family SNARE-like superfamily protein;(source:Araport11) Ipc10G0011250 AT4G31020.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0011240 AT1G67520.5 0 0 lectin protein kinase family protein;(source:Araport11) Ipc10G0011230 AT3G50350.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc10G0011220 AT5G20320.1 dicer-like 4 Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein. dicer-like 4;(source:Araport11) Ipc10G0011210 AT2G07690.1 Minichromosome maintenance (MCM2/3/5) family protein Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc10G0011200 AT5G12370.2 exocyst complex component sec10 0 exocyst complex component sec10;(source:Araport11) Ipc10G0011190 AT5G35160.4 0 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc10G0011180 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0011170 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0011160 AT2G46490.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0011150 AT5G35100.3 0 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc10G0011140 AT5G25220.1 KNOTTED1-like homeobox gene 3 A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia homeobox protein knotted-1-like 3;(source:Araport11) Ipc10G0011130 AT3G46920.1 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc10G0011120 AT1G19250.1 flavin-dependent monooxygenase 1 FMO1 is required for full expression of TIR-NB-LRR conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. FMO1 functions as a pipecolate N-hydroxylase and catalyzes the biochemical conversion of pipecolic acid to N-hydroxypipecolic acid (NHP). NHP systemically accumulates in the plant foliage and induces systemic acquired resistance to pathogen infection. flavin-dependent monooxygenase 1;(source:Araport11) Ipc10G0011110 AT4G21105.3 0 0 cytochrome-c oxidase/ electron carrier;(source:Araport11) Ipc10G0011100 AT2G33630.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0011090 AT1G76450.1 Photosystem II reaction center PsbP family protein 0 Photosystem II reaction center PsbP family protein;(source:Araport11) Ipc10G0011080 AT2G33610.1 switch subunit 3 Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously. switch subunit 3;(source:Araport11) Ipc10G0011070 AT2G33590.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0011060 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc10G0011050 AT1G20930.1 cyclin-dependent kinase B2;2 Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. cyclin-dependent kinase B2;(source:Araport11) Ipc10G0011040 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc10G0011030 AT1G76620.1 Protein of unknown function, DUF547 0 Serine/Threonine-kinase, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc10G0011020 AT1G21065.1 0 0 secondary thiamine-phosphate synthase enzyme;(source:Araport11) Ipc10G0011000 AT5G25070.1 0 0 neurofilament light protein;(source:Araport11) Ipc10G0011010 AT1G67280.1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein Encodes a Ni+ dependent glyoxylase. Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein;(source:Araport11) Ipc10G0010980 AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc10G0010990 AT3G49380.1 IQ-domain 15 0 IQ-domain 15;(source:Araport11) Ipc10G0010970 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc10G0010960 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0010950 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc11G0007080 AT5G62420.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc11G0007090 AT4G26060.1 Ribosomal protein L18ae family 0 Ribosomal protein L18ae family;(source:Araport11) Ipc11G0007100 AT2G19385.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc11G0007110 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc11G0007120 AT3G03880.1 Protein of unknown function (DUF1639) 0 sterol O-acyltransferase, putative (DUF1639);(source:Araport11) Ipc11G0007130 AT5G20490.2 Myosin family protein with Dil domain Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. Required for fast root hair growth. This gene appears to be expressed at low levels throughout the plant. myosin family protein with Dil;(source:Araport11) Ipc11G0007140 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc11G0007150 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0007160 AT4G32840.1 phosphofructokinase 6 0 phosphofructokinase 6;(source:Araport11) Ipc11G0007170 AT1G54160.1 nuclear factor Y, subunit A5 Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought. nuclear factor Y, subunit A5;(source:Araport11) Ipc07G0007530 AT1G76700.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc07G0007520 AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0007510 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0007500 AT4G26000.1 RNA-binding KH domain-containing protein Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway. RNA-binding KH domain-containing protein;(source:Araport11) Ipc07G0007490 AT2G24420.2 DNA repair ATPase-related 0 DNA repair ATPase-like protein;(source:Araport11) Ipc07G0007480 AT5G24800.1 basic leucine zipper 9 Encodes bZIP protein BZO2H2. basic leucine zipper 9;(source:Araport11) Ipc07G0007470 AT5G23880.1 cleavage and polyadenylation specificity factor 100 Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus. cleavage and polyadenylation specificity factor 100;(source:Araport11) Ipc07G0007460 AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein 0 MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc07G0007450 AT4G31160.1 DDB1-CUL4 associated factor 1 Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development. DDB1-CUL4 associated factor 1;(source:Araport11) Ipc07G0007440 AT4G31150.4 0 0 endonuclease V family protein;(source:Araport11) Ipc07G0007430 AT4G31140.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc07G0007420 AT4G31120.1 SHK1 binding protein 1 Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification. SHK1 binding protein 1;(source:Araport11) Ipc07G0007410 AT4G31115.1 Protein of unknown function (DUF1997) 0 DUF1997 family protein, putative (DUF1997);(source:Araport11) Ipc07G0007400 AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc07G0007390 AT1G14590.1 Nucleotide-diphospho-sugar transferase family protein 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc07G0007380 AT4G31390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc07G0007370 AT1G31350.1 KAR-UP F-box 1 0 KAR-UP F-box 1;(source:Araport11) Ipc07G0007360 AT1G20300.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0007350 AT1G76065.1 LYR family of Fe/S cluster biogenesis protein 0 LYR family of Fe/S cluster biogenesis protein;(source:Araport11) Ipc07G0007340 AT5G10770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0007330 AT3G09360.3 0 0 Cyclin/Brf1-like TBP-binding protein;(source:Araport11) Ipc07G0007320 AT5G23960.2 terpene synthase 21 Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21;(source:Araport11) Ipc07G0007310 AT4G16740.2 terpene synthase 03 Encodes an (E,E)-alpha-farnesene synthase in the Col ecotype of Arabidopsis. This enzyme can also catalyze the formation of (E)-beta-ocimene as well as trace amounts of myrcene and other related compounds in vitro. The cytosolic localization of the protein may make it favor (E,E)-alpha-farnesene biosynthesis because the precursor of this product, FPP, is primarily cytosolic. Transcript levels for this gene increase in response to treatment with the jasmonic acid mimic coronalon or in response to the insect Plutella xylostella. TPS03 transcripts can also be detected in flowers. A similar protein from the C24 ecotype with one amino acid change (S267F) has a different substrate specificity. terpene synthase 03;(source:Araport11) Ipc07G0007300 AT3G18990.1 AP2/B3-like transcriptional factor family protein Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc07G0007290 AT3G15680.2 0 0 Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11) Ipc07G0007280 AT4G31780.2 monogalactosyl diacylglycerol synthase 1 Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. monogalactosyl diacylglycerol synthase 1;(source:Araport11) Ipc07G0007270 AT2G26250.1 3-ketoacyl-CoA synthase 10 epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle. 3-ketoacyl-CoA synthase 10;(source:Araport11) Ipc10G0009400 AT1G80245.7 0 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc10G0009390 AT5G12410.1 THUMP domain-containing protein 0 THUMP domain-containing protein;(source:Araport11) Ipc10G0009380 AT3G20060.1 ubiquitin-conjugating enzyme19 Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus. ubiquitin-conjugating enzyme19;(source:Araport11) Ipc10G0009370 AT1G50460.1 hexokinase-like 1 Involved in glucose-ethylene crosstalk. hexokinase-like 1;(source:Araport11) Ipc10G0009360 AT5G41440.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0009350 AT1G40390.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0009340 AT5G12840.5 0 Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. nuclear factor Y, subunit A1;(source:Araport11) Ipc10G0009330 AT3G20920.1 translocation protein-related 0 translocation protein-like protein;(source:Araport11) Ipc10G0009320 AT5G19450.2 calcium-dependent protein kinase 19 calcium-dependent protein kinase (CDPK19) mRNA, complete calcium-dependent protein kinase 19;(source:Araport11) Ipc10G0009310 AT4G21090.3 MITOCHONDRIAL FERREDOXIN 2 0 MITOCHONDRIAL FERREDOXIN 2;(source:Araport11) Ipc10G0009300 AT5G37860.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc10G0009290 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc10G0009280 AT5G04590.1 sulfite reductase A.thaliana gene encoding sulfite reductase. sulfite reductase;(source:Araport11) Ipc10G0009270 AT1G51400.1 Photosystem II 5 kD protein 0 Photosystem II 5 kD protein;(source:Araport11) Ipc10G0009260 AT5G12470.1 Protein of unknown function (DUF3411) 0 UvrABC system C protein, putative (DUF3411);(source:Araport11) Ipc10G0009250 AT1G51450.1 TRAUCO Nuclear protein required for early embryogenesis. Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex that is also involved in the timing of the floral transition and in leaf morphogenesis. Mutants are decreased in H3K4 histone trimethylation. TRAUCO;(source:Araport11) Ipc10G0009240 AT3G21090.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc10G0009230 AT3G21090.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc10G0009220 AT3G60500.3 3'-5'-exoribonuclease family protein Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis. 3-5-exoribonuclease family protein;(source:Araport11) Ipc10G0009210 AT1G54400.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc10G0009200 AT5G66070.5 0 E3 ubiquitin ligase that functions in negative regulation of ABA signaling. RING/U-box superfamily protein;(source:Araport11) Ipc10G0009190 AT3G20898.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0009180 AT3G20890.2 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0009170 AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0009160 AT1G51350.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0009150 AT5G12860.1 dicarboxylate transporter 1 AtpOMT1 encodes dicarboxylate transporter functions both as as an oxaloacetate/malate transporter and as a 2-oxoglutarate/malate transporter. dicarboxylate transporter 1;(source:Araport11) Ipc10G0009140 AT1G51310.1 transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases 0 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;(source:Araport11) Ipc10G0009130 AT4G14700.1 origin recognition complex 1 Encodes origin of replication complex 1a subunit.The protein contains a PHD domain,binds methylated DNA and appears to function as a transcriptional activator. origin recognition complex 1;(source:Araport11) Ipc10G0009120 AT3G18030.1 HAL3-like protein A flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B). HAL3-like protein A;(source:Araport11) Ipc10G0009110 AT3G57650.1 lysophosphatidyl acyltransferase 2 Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity. lysophosphatidyl acyltransferase 2;(source:Araport11) Ipc10G0009100 #N/A #N/A #N/A #N/A Ipc10G0009090 AT3G63530.2 RING/U-box superfamily protein Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation. RING/U-box superfamily protein;(source:Araport11) Ipc10G0009080 AT1G67680.1 SRP72 RNA-binding domain 0 SRP72 RNA-binding domain-containing protein;(source:Araport11) Ipc10G0009070 AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain. PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc10G0009060 AT2G23140.5 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc10G0009050 AT2G23140.5 0 PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc10G0009040 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0009030 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0009020 AT3G12630.1 A20/AN1-like zinc finger family protein Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis. A20/AN1-like zinc finger family protein;(source:Araport11) Ipc10G0009010 AT1G51200.4 A20/AN1-like zinc finger family protein 0 A20/AN1-like zinc finger family protein;(source:Araport11) Ipc10G0009000 AT1G51220.1 WIP domain protein 5 Encodes a WIP domain containing protein. Putative target of WRKY53.WIP5 is a paralog of NTT and along with WIP4,acts redundantly in cell fate determination during primary root development. MP binds to AuxRE motifs within the WIP5 gene and likely regulates its expression. WIP domain protein 5;(source:Araport11) Ipc10G0008990 AT1G63440.1 heavy metal atpase 5 The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed. heavy metal atpase 5;(source:Araport11) Ipc10G0008980 AT5G13490.2 ADP/ATP carrier 2 Encodes mitochondrial ADP/ATP carrier ADP/ATP carrier 2;(source:Araport11) Ipc10G0008970 AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain. PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation. RING/U-box superfamily protein with ARM repeat domain-containing protein;(source:Araport11) Ipc10G0008960 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008950 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008940 AT5G20480.2 0 Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. EF-TU receptor;(source:Araport11) Ipc10G0008930 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008920 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008910 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008900 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008890 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0008880 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0008870 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0008860 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0008850 AT1G31320.1 LOB domain-containing protein 4 0 LOB domain-containing protein 4;(source:Araport11) Ipc10G0008840 AT3G20810.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. jmjd5 mutant plants have a short-period circadian phenotype. JMJD5 has histone demethylase activity and interacts with EFM to repress FT. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0008830 AT4G09920.4 0 0 FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11) Ipc10G0008810 AT5G02700.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0008820 AT5G22610.2 0 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc10G0008800 AT2G32900.1 centromere/kinetochore protein, putative (ZW10) Homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation. Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus, contain a Zeste?White 10 (ZW10) domain and a Sec39 domain. Required for proper maturation of seed storage proteins. centromere/kinetochore protein, putative (ZW10);(source:Araport11) Ipc10G0008790 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0008780 AT1G73730.1 ETHYLENE-INSENSITIVE3-like 3 Encodes a putative transcription factor involved in ethylene signalling. Isolated DNA binding domain has been shown to bind DNA in vitro. ETHYLENE-INSENSITIVE3-like 3;(source:Araport11) Ipc10G0008770 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc10G0008760 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0008750 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc10G0008610 AT3G20790.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0008740 AT1G04640.2 lipoyltransferase 2 Lipoyltransferase, located in mitochondria but not found in chloroplasts lipoyltransferase 2;(source:Araport11) Ipc10G0008580 AT3G12120.2 fatty acid desaturase 2 Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. fatty acid desaturase 2;(source:Araport11) Ipc10G0008730 AT1G23030.1 ARM repeat superfamily protein Encodes a plant U-Box protein that is capable of binding and ubiquitinating MYC2 in vitro, acting as an E3 ligase. Unlike PUB10, its closest homolog in Arabidopsis, it does not appear to play a major role in the MeJA-mediated response. ARM repeat superfamily protein;(source:Araport11) Ipc10G0008720 AT5G06720.1 peroxidase 2 Encodes a peroxidase with diverse roles in the wound response, flower development, and syncytium formation. peroxidase 2;(source:Araport11) Ipc10G0008710 AT1G50480.1 10-formyltetrahydrofolate synthetase 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete The mRNA is cell-to-cell mobile. 10-formyltetrahydrofolate synthetase;(source:Araport11) Ipc10G0008700 AT1G05770.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc10G0008690 AT1G19715.3 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc10G0008680 AT1G05770.1 Mannose-binding lectin superfamily protein 0 Mannose-binding lectin superfamily protein;(source:Araport11) Ipc10G0008670 AT5G21140.1 embryo defective 1379 Encodes a nuclear localized, structural subunit of the SMC 5/6 complex and a non- SMC element. Loss of function results in abnormal cell division and embryo lethality. Analysis of partially rescued lines indicates a role in double strand break DNA repair. Similar phenotype to NSE3 which it also interacts with. embryo defective 1379;(source:Araport11) Ipc10G0008650 AT5G40160.1 Ankyrin repeat family protein Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality. Ankyrin repeat family protein;(source:Araport11) Ipc10G0008510 AT3G59540.1 Ribosomal L38e protein family 0 Ribosomal L38e protein family;(source:Araport11) Ipc10G0008490 AT5G19875.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0008470 AT1G58170.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc10G0008450 AT1G11880.1 transferases, transferring hexosyl groups 0 transferases, transferring hexosyl groups;(source:Araport11) Ipc10G0008630 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc07G0001390 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001400 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0001410 AT4G15640.2 0 0 adenylyl cyclase;(source:Araport11) Ipc07G0001420 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001430 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001440 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0001450 AT5G49810.1 methionine S-methyltransferase Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation. The mRNA is cell-to-cell mobile. methionine S-methyltransferase;(source:Araport11) Ipc07G0001460 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc01G0023960 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) Ipc01G0023970 AT1G35670.1 calcium-dependent protein kinase 2 Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 2;(source:Araport11) Ipc01G0023980 AT5G41670.4 0 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc01G0023990 AT4G09580.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc01G0024000 AT5G11900.1 Translation initiation factor SUI1 family protein 0 Translation initiation factor SUI1 family protein;(source:Araport11) Ipc01G0024010 AT1G71930.2 0 Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. vascular related NAC-domain protein 7;(source:Araport11) Ipc01G0024020 AT3G30370.1 0 0 MuDR family transposase;(source:Araport11) Ipc01G0024030 AT5G22100.1 RNA cyclase family protein 0 RNA cyclase family protein;(source:Araport11) Ipc01G0024040 AT3G06060.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0024050 AT1G22690.3 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc01G0024060 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc01G0024070 AT4G09620.3 0 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc01G0024080 AT1G26190.5 0 TTM2 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity.It contains both a uridine kinase (UK) domain and CYTH domain. TTM2 is involved in negative regulation defense response to pathogens (PMID:28733390). Phosphoribulokinase / Uridine kinase family;(source:Araport11) Ipc01G0024090 AT1G71910.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0024100 AT5G45050.4 0 Encodes a member of the WRKY Transcription Factor (Group II-e) family. Disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc01G0024110 AT5G36110.1 cytochrome P450, family 716, subfamily A, polypeptide 1 Encodes a member of the CYP716A subfamily of cytochrome P450 monooxygenases with triterpene oxidizing activity catalyzing C-28 hydroxylation of alpha-amyrin, beta-amyrin, and lupeol, producing uvaol, erythrodiol, and betulin, respectively. Additionally, it shows carboxylation activity for the C-28 position of alpha- and beta-amyrin. cytochrome P450, family 716, subfamily A, polypeptide 1;(source:Araport11) Ipc01G0024120 AT1G34420.1 leucine-rich repeat transmembrane protein kinase family protein 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc01G0024130 #N/A #N/A #N/A #N/A Ipc01G0024140 AT3G26660.1 LOB domain-containing protein 24 0 LOB domain-containing protein 24;(source:Araport11) Ipc01G0024150 AT1G34420.1 leucine-rich repeat transmembrane protein kinase family protein 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc01G0024160 AT5G44240.2 aminophospholipid ATPase 2 Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile. aminophospholipid ATPase 2;(source:Araport11) Ipc01G0024170 AT2G25350.1 Phox (PX) domain-containing protein 0 Phox (PX) domain-containing protein;(source:Araport11) Ipc13G0015710 AT1G80410.2 tetratricopeptide repeat (TPR)-containing protein Encodes the catalytic subunit of a N-terminal acetyltransferase. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0024180 AT4G13920.1 receptor like protein 50 0 receptor like protein 50;(source:Araport11) Ipc01G0024190 AT2G15042.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0024200 AT3G06740.1 GATA transcription factor 15 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 15;(source:Araport11) Ipc01G0024210 AT5G60790.1 ABC transporter family protein member of GCN subfamily ABC transporter family protein;(source:Araport11) Ipc01G0024220 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc01G0024230 AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc01G0024240 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc01G0024250 AT4G16120.1 COBRA-like protein-7 precursor putative membrane-anchored cell wall protein COBRA-like protein-7 precursor;(source:Araport11) Ipc01G0024260 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc01G0024270 AT3G14180.1 sequence-specific DNA binding transcription factors 0 sequence-specific DNA binding transcription factor;(source:Araport11) Ipc01G0024280 AT4G29970.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0024290 AT5G49230.1 Drought-responsive family protein Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction. Drought-responsive family protein;(source:Araport11) Ipc01G0024300 AT4G16100.1 Protein of unknown function (DUF789) 0 heat shock protein, putative (DUF789);(source:Araport11) Ipc01G0026790 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0026800 AT1G08830.2 copper/zinc superoxide dismutase 1 Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress. Activation of CSD1 in the cytoplasm involves both a CCS-dependent and -independent pathway. copper/zinc superoxide dismutase 1;(source:Araport11) Ipc01G0026810 AT1G59970.1 Matrixin family protein 0 Matrixin family protein;(source:Araport11) Ipc01G0026820 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc01G0026830 AT2G36980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0026840 AT5G09890.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc01G0026850 AT1G59550.1 UBX domain-containing protein This locus is annotated as a protein-coding gene in TAIR10. Based on communication with Jean-Luc GALLOIS (April 2013), this gene is re-annotated as a UBX domain-containing pseudogene. Note that the Map Detail Image on the locus detial page and in GBrowse will not be updated until after the next genome release. UBX domain-containing protein;(source:Araport11) Ipc01G0026860 AT5G18840.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc01G0026870 #N/A #N/A #N/A #N/A Ipc01G0026880 AT4G03020.3 0 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0026890 AT1G08270.2 0 0 vacuolar protein sorting-associated protein;(source:Araport11) Ipc01G0026900 AT5G33330.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0026910 AT3G49080.1 Ribosomal protein S5 domain 2-like superfamily protein Mitochondrial ribosomal protein, similar to RPS9 from E.coli. Loss of function results in gametophyte lethality, particularly the megagametophyte. Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc01G0026920 AT5G59570.2 0 Encodes BOA (BROTHER OF LUX ARRHYTHMO), a component of the circadian clock.The mRNA is cell-to-cell mobile. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0026930 AT3G16857.1 response regulator 1 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 1;(source:Araport11) Ipc01G0026940 AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein Leucine rich repeat protein that also contains an adenylate cyclase catalytic core motif. Capable of converting ATP to cAMP in vitro. Mutants show increased susceptibility to fungal pathogens. LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11) Ipc01G0026950 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc01G0026600 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc01G0026610 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc01G0026620 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc01G0026540 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000250 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0017070 AT2G41590.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc13G0017080 AT5G64820.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0017090 AT5G42360.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc13G0017100 AT1G12220.3 0 Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB. Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc13G0017110 AT1G33390.2 0 Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain). RNA helicase family protein;(source:Araport11) Ipc02G0007500 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc02G0007510 AT3G47600.1 myb domain protein 94 Encodes a putative transcription factor (MYB94). myb domain protein 94;(source:Araport11) Ipc02G0007520 AT5G17847.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007530 AT5G62480.1 glutathione S-transferase tau 9 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase tau 9;(source:Araport11) Ipc02G0007540 AT1G04635.1 ribonuclease P family protein / Rpp14 family protein 0 ribonuclease P family protein / Rpp14 family protein;(source:Araport11) Ipc02G0007550 AT1G26850.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc02G0007560 AT4G03090.5 0 0 sequence-specific DNA binding transcription factor ATNDX;(source:Araport11) Ipc02G0007580 AT3G15351.5 0 0 P53/DNA damage-regulated protein;(source:Araport11) Ipc02G0007570 AT2G39490.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc02G0007590 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0007600 AT5G39890.1 Protein of unknown function (DUF1637) 0 2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11) Ipc15G0014440 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0014450 AT4G36470.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0014460 AT5G04380.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0014470 AT1G19640.1 jasmonic acid carboxyl methyltransferase Encodes a S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase that catalyzes the formation of methyljasmonate from jasmonic acid. Its expression is induced in response to wounding or methyljasmonate treatment. jasmonic acid carboxyl methyltransferase;(source:Araport11) Ipc15G0014480 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0014490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc15G0014500 AT3G07740.1 homolog of yeast ADA2 2A encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1 ADA2 2A;(source:Araport11) Ipc15G0014510 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0008170 AT3G30280.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc02G0008160 AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc02G0008150 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc02G0008140 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0008130 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) IpcGene37753 AT1G27970.1 nuclear transport factor 2B Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport. The mRNA is cell-to-cell mobile. nuclear transport factor 2B;(source:Araport11) Ipc04G0002480 AT4G15630.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc04G0002490 AT4G13670.1 plastid transcriptionally active 5 0 plastid transcriptionally active 5;(source:Araport11) Ipc04G0002500 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0002510 AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc04G0002520 AT1G68630.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc04G0002530 AT4G15560.1 Deoxyxylulose-5-phosphate synthase Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis Deoxyxylulose-5-phosphate synthase;(source:Araport11) Ipc04G0002540 #N/A #N/A #N/A #N/A Ipc04G0002550 AT5G18830.1 squamosa promoter binding protein-like 7 Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. squamosa promoter binding protein-like 7;(source:Araport11) Ipc04G0002560 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0002570 AT5G49150.7 0 Encodes a transmembrane domain containing protein expressed in sperm cells. Target promoter of the male germline-specific transcription factor DUO1. gamete expressed 2;(source:Araport11) Ipc04G0002580 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0002590 AT1G01580.2 0 Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1. ferric reduction oxidase 2;(source:Araport11) Ipc04G0002600 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc04G0002610 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0007370 AT3G13960.1 growth-regulating factor 5 Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5;(source:Araport11) Ipc11G0007360 AT3G51930.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc11G0007350 AT2G06210.1 binding Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. Member of PAF-C complex. binding protein;(source:Araport11) Ipc11G0007340 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007330 AT5G34870.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0007320 AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex Encodes one of the subunits of the head domain of the MEDIATOR complex. The complex conveys transcriptional signals by acting as an intermediary between transcription factors and RNA polymerase II. Together with MED18, MED20 is proposed to control the balance of salicylic acid and jasmonate associated defense pathways. It is involved in miRNA biogenesis by recruiting Pol II to promoters of miRNA genes. TATA-binding related factor (TRF) of subunit 20 of Mediator complex;(source:Araport11) Ipc11G0007310 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007300 AT2G06255.1 ELF4-like 3 DUF1313 domain containing protein. ELF4-like 3;(source:Araport11) Ipc01G0026380 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0026370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026360 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026350 AT5G66675.4 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc01G0026340 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc05G0000550 AT4G35110.6 0 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc05G0000560 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc05G0000570 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc05G0000580 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc05G0000590 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0001820 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc07G0001810 AT5G54670.3 0 Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. kinesin 3;(source:Araport11) Ipc07G0001800 AT5G56510.5 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc07G0001790 AT5G23070.1 Thymidine kinase Encodes a thymidine kinase that salvages DNA precursors. The pyrimidine salvage pathway is crucial for chloroplast development and genome replication, as well as for the maintenance of its integrity. Thymidine kinase;(source:Araport11) Ipc07G0001780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0001770 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc07G0001760 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0001750 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc07G0001740 AT5G59740.1 UDP-N-acetylglucosamine (UAA) transporter family 0 UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc09G0011450 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0019010 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc10G0019060 AT5G66840.2 0 0 SAP domain-containing protein;(source:Araport11) Ipc10G0019050 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc10G0019070 ATCG00730.1 photosynthetic electron transfer D A chloroplast gene encoding subunit IV of the cytochrome b6/f complex photosynthetic electron transfer D;(source:Araport11) Ipc10G0019090 AT2G29650.1 phosphate transporter 4;1 Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane. phosphate transporter 4;(source:Araport11) Ipc10G0019100 AT3G14690.1 cytochrome P450, family 72, subfamily A, polypeptide 15 putative cytochrome P450 The mRNA is cell-to-cell mobile. cytochrome P450, family 72, subfamily A, polypeptide 15;(source:Araport11) Ipc10G0019110 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc10G0019120 AT3G07360.1 plant U-box 9 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 9;(source:Araport11) Ipc10G0019130 AT5G48545.1 histidine triad nucleotide-binding 3 Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro. histidine triad nucleotide-binding 3;(source:Araport11) Ipc10G0019140 AT3G47770.2 0 0 ABC2 homolog 5;(source:Araport11) Ipc10G0019150 AT3G25250.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Arabidopsis protein kinase The mRNA is cell-to-cell mobile. AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc02G0011020 AT3G52380.1 chloroplast RNA-binding protein 33 Encodes a chloroplast RNA-binding protein that stabilizes chloroplast RNAs as evidenced by analyses of transcript accumulation in null mutants. Essential for seedling development (albino, strongly retarded growth even on sucrose-containing medium). chloroplast RNA-binding protein 33;(source:Araport11) Ipc02G0011030 AT1G59660.1 Nucleoporin autopeptidase Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoporin autopeptidase;(source:Araport11) Ipc02G0011040 AT1G49390.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0011050 AT4G01700.1 Chitinase family protein 0 Chitinase family protein;(source:Araport11) Ipc02G0011060 AT4G36170.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0011070 AT1G79640.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc02G0011080 AT5G57800.1 Fatty acid hydroxylase superfamily encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. The mRNA is cell-to-cell mobile. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc02G0011090 AT3G12660.1 FASCICLIN-like arabinogalactan protein 14 precursor fasciclin-like arabinogalactan-protein, family (FLA14) FASCICLIN-like arabinogalactan protein 14 precursor;(source:Araport11) Ipc02G0011100 AT2G24530.2 0 0 transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11) Ipc02G0011110 AT1G73110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc02G0011120 AT3G21240.1 4-coumarate:CoA ligase 2 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. 4-coumarate:CoA ligase 2;(source:Araport11) Ipc02G0011130 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc02G0011140 AT1G16880.1 uridylyltransferase-related Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. The mRNA is cell-to-cell mobile. uridylyltransferase-like protein;(source:Araport11) Ipc02G0011150 AT1G09760.1 U2 small nuclear ribonucleoprotein A 0 U2 small nuclear ribonucleoprotein A;(source:Araport11) Ipc02G0011160 AT5G51070.1 Clp ATPase ATP-dependent Clp protease regulatory subunit The mRNA is cell-to-cell mobile. Clp ATPase;(source:Araport11) Ipc02G0011170 #N/A #N/A #N/A #N/A Ipc02G0011180 AT5G47910.1 respiratory burst oxidase homologue D NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. The mRNA is cell-to-cell mobile. respiratory burst oxidase homologue D;(source:Araport11) Ipc02G0011190 AT5G07350.1 TUDOR-SN protein 1 RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2. TUDOR-SN protein 1;(source:Araport11) Ipc02G0011200 AT4G09670.1 Oxidoreductase family protein 0 Oxidoreductase family protein;(source:Araport11) Ipc02G0011210 AT5G44440.2 0 0 FAD-binding Berberine family protein;(source:Araport11) Ipc02G0011220 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0011230 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc02G0011240 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc02G0011250 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc02G0011260 AT2G12400.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc02G0011270 AT5G25280.3 0 0 serine-rich protein-like protein;(source:Araport11) Ipc02G0011280 AT1G80530.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc02G0011290 AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc02G0011300 AT1G69880.1 thioredoxin H-type 8 0 thioredoxin H-type 8;(source:Araport11) Ipc02G0011310 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0011320 #N/A #N/A #N/A #N/A Ipc02G0011330 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc02G0011340 AT2G11890.1 adenylate cyclases Encodes a tripolyphosphatase that is involved in root development. adenylate cyclase;(source:Araport11) Ipc02G0011350 AT1G67480.3 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc02G0011360 AT3G01840.1 Protein kinase superfamily protein Encodes a putative LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it was determined to be a pseudo kinase since lack of the ATP-binding P-loop in the kinase domain. Protein kinase superfamily protein;(source:Araport11) Ipc02G0011370 AT1G15740.1 Leucine-rich repeat family protein 0 Leucine-rich repeat family protein;(source:Araport11) Ipc02G0011380 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc02G0011390 AT1G49390.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc02G0011400 AT1G80460.1 Actin-like ATPase superfamily protein Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1. Actin-like ATPase superfamily protein;(source:Araport11) Ipc02G0011410 AT1G52510.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0011420 AT1G52520.1 FAR1-related sequence 6 0 FAR1-related sequence 6;(source:Araport11) Ipc02G0011430 AT1G52530.2 0 0 Hus1-like protein;(source:Araport11) Ipc02G0011440 AT1G48900.1 Signal recognition particle, SRP54 subunit protein 0 Signal recognition particle, SRP54 subunit protein;(source:Araport11) Ipc02G0011450 AT3G15900.1 0 0 homoserine O-acetyltransferase;(source:Araport11) Ipc02G0011460 AT5G32440.1 Ubiquitin system component Cue protein 0 Ubiquitin system component Cue protein;(source:Araport11) Ipc02G0011470 AT2G32600.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0011480 AT3G16830.1 TOPLESS-related 2 0 TOPLESS-related 2;(source:Araport11) Ipc02G0011490 AT3G15850.1 fatty acid desaturase 5 Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. The mRNA is cell-to-cell mobile. fatty acid desaturase 5;(source:Araport11) Ipc02G0011500 AT3G15800.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc02G0011510 AT1G15340.1 methyl-CPG-binding domain 10 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 10;(source:Araport11) Ipc02G0011520 AT5G25360.3 0 0 hypothetical protein;(source:Araport11) Ipc02G0011530 AT4G33300.2 ADR1-like 1 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. ADR1-like 1;(source:Araport11) Ipc02G0011540 AT3G15730.1 phospholipase D alpha 1 Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. The mRNA is cell-to-cell mobile. phospholipase D alpha 1;(source:Araport11) Ipc02G0011550 AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc02G0011560 AT1G80500.2 0 Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. SNARE-like superfamily protein;(source:Araport11) Ipc02G0011570 AT1G47710.1 Serine protease inhibitor (SERPIN) family protein 0 Serine protease inhibitor (SERPIN) family protein;(source:Araport11) Ipc02G0011580 AT3G15690.2 Single hybrid motif superfamily protein 0 Single hybrid motif superfamily protein;(source:Araport11) Ipc02G0011590 AT1G80210.1 Mov34/MPN/PAD-1 family protein 0 Mov34/MPN/PAD-1 family protein;(source:Araport11) Ipc02G0011600 AT3G24740.6 0 0 cellulose synthase, putative (DUF1644);(source:Araport11) Ipc02G0011610 AT3G15660.2 glutaredoxin 4 0 glutaredoxin 4;(source:Araport11) Ipc02G0011620 AT1G15440.1 periodic tryptophan protein 2 Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development. periodic tryptophan protein 2;(source:Araport11) Ipc02G0011630 AT1G80230.1 Rubredoxin-like superfamily protein 0 Rubredoxin-like superfamily protein;(source:Araport11) Ipc02G0011640 AT5G40810.1 Cytochrome C1 family 0 Cytochrome C1 family;(source:Araport11) Ipc02G0011650 AT1G15460.2 0 Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions. HCO3- transporter family;(source:Araport11) Ipc02G0011670 AT1G52760.1 lysophospholipase 2 Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2). lysophospholipase 2;(source:Araport11) Ipc02G0011660 AT1G52760.1 lysophospholipase 2 Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2). lysophospholipase 2;(source:Araport11) Ipc02G0011680 AT4G32530.1 ATPase, F0/V0 complex, subunit C protein 0 ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc02G0011690 AT1G80300.1 nucleotide transporter 1 Encodes an ATP/ADP transporter. The mRNA is cell-to-cell mobile. nucleotide transporter 1;(source:Araport11) Ipc02G0011700 AT3G15550.1 0 0 trichohyalin;(source:Araport11) Ipc02G0000650 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000640 AT3G58660.1 Ribosomal protein L1p/L10e family 0 Ribosomal protein L1p/L10e family;(source:Araport11) Ipc02G0000630 AT1G62340.1 PA-domain containing subtilase family protein Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants PA-domain containing subtilase family protein;(source:Araport11) Ipc02G0000620 AT2G18290.1 anaphase promoting complex 10 Encodes APC10 (anaphase promoting complex 10). Overexpression of APC10 likely mimics auxin and ethylene sensitive phenotypes. Plays an essential role in cell proliferation during leaf development. anaphase promoting complex 10;(source:Araport11) Ipc02G0000610 AT3G62860.2 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0000600 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc02G0000590 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc02G0000580 AT5G05680.1 nuclear pore complex protein-related Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs. nuclear pore complex protein-like protein;(source:Araport11) Ipc06G0016770 AT5G26280.3 0 0 TRAF-like family protein;(source:Araport11) Ipc06G0016780 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc06G0016790 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc06G0016800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016820 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0016830 AT4G29070.2 Phospholipase A2 family protein 0 Phospholipase A2 family protein;(source:Araport11) Ipc06G0016840 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016850 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc11G0002980 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0002990 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc11G0003000 AT5G25930.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc11G0003010 AT3G24550.1 proline extensin-like receptor kinase 1 Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). The mRNA is cell-to-cell mobile. proline extensin-like receptor kinase 1;(source:Araport11) Ipc11G0003020 AT5G04120.1 Phosphoglycerate mutase family protein Encodes a cofactor-dependent phosphoglycerate mutase (dPGM) - like protein with phosphoserine phosphatase activity that may be responsible for serine anabolism. Phosphoglycerate mutase family protein;(source:Araport11) Ipc11G0003030 AT1G68180.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0003040 AT3G47680.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc11G0003050 AT1G03365.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc11G0003060 AT1G43690.1 ubiquitin interaction motif-containing protein 0 ubiquitin interaction motif-containing protein;(source:Araport11) Ipc11G0003070 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0003080 AT1G43710.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc11G0003090 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc11G0003100 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc11G0003110 AT1G21320.2 nucleotide binding;nucleic acid binding 0 nucleic acid/nucleotide binding protein;(source:Araport11) Ipc11G0003120 AT5G26210.1 alfin-like 4 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 4;(source:Araport11) Ipc11G0003130 AT3G21790.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc11G0003140 AT5G42140.2 0 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc11G0003150 AT5G42130.1 Mitochondrial substrate carrier family protein Encodes a protein belonging to the mitochondrial carrier family and similar to animal mitoferrin but likely NOT to be located in the mitochondria, but rather in chloroplasts. It is likely to be involved in transporting iron into the chloroplast. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc11G0003160 AT1G19630.1 cytochrome P450, family 722, subfamily A, polypeptide 1 0 cytochrome P450, family 722, subfamily A, polypeptide 1;(source:Araport11) Ipc11G0003170 AT1G43770.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc11G0003180 AT3G18690.1 MAP kinase substrate 1 Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators. MAP kinase substrate 1;(source:Araport11) Ipc11G0003190 AT1G32870.3 0 Expression in rosette leaves is activated by high concentration of boron. NAC domain protein 13;(source:Araport11) Ipc11G0003200 AT3G21260.3 Glycolipid transfer protein (GLTP) family protein 0 Glycolipid transfer protein (GLTP) family protein;(source:Araport11) Ipc11G0003210 AT1G78780.5 0 0 pathogenesis-related family protein;(source:Araport11) Ipc11G0003220 AT1G35540.1 auxin response factor 14 0 auxin response factor 14;(source:Araport11) Ipc15G0014430 AT5G11790.1 N-MYC downregulated-like 2 0 N-MYC downregulated-like 2;(source:Araport11) Ipc15G0014420 AT4G32980.2 0 Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. Nuclear localization is dependent upon interaction with STM. homeobox protein ATH1;(source:Araport11) Ipc15G0014410 AT5G51670.2 0 0 hypothetical protein (DUF668);(source:Araport11) Ipc15G0014400 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc15G0014390 #N/A #N/A #N/A #N/A Ipc15G0014370 AT2G26040.1 PYR1-like 2 Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYR1-like 2;(source:Araport11) Ipc15G0014380 #N/A #N/A #N/A #N/A Ipc15G0014360 AT5G56840.1 myb-like transcription factor family protein 0 myb-like transcription factor family protein;(source:Araport11) Ipc15G0014350 AT5G11800.1 K+ efflux antiporter 6 member of Putative potassium proton antiporter family K+ efflux antiporter 6;(source:Araport11) Ipc15G0014340 AT5G26040.2 histone deacetylase 2 Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins. histone deacetylase 2;(source:Araport11) Ipc15G0014330 AT2G26070.1 Protein of unknown function (DUF778) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1. protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778);(source:Araport11) Ipc15G0014320 AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0014310 AT5G11840.1 Protein of unknown function (DUF1230) 0 YCF36, putative (DUF1230);(source:Araport11) Ipc15G0014300 #N/A #N/A #N/A #N/A Ipc15G0014290 AT4G33010.1 glycine decarboxylase P-protein 1 0 glycine decarboxylase P-protein 1;(source:Araport11) Ipc15G0014280 AT5G11850.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0014270 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0014260 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc15G0014250 AT1G10970.2 0 A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency. zinc transporter;(source:Araport11) Ipc15G0014240 AT2G26110.1 Protein of unknown function (DUF761) 0 bromodomain protein (DUF761);(source:Araport11) Ipc15G0014230 AT3G18140.2 Transducin/WD40 repeat-like superfamily protein Encodes LST8-1, involved in regulating amino acid accumulation and the synthesis of myo-inositol and raffinose during plant adaptation to long days. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0014220 AT5G11890.1 0 0 harpin-induced protein;(source:Araport11) Ipc15G0014210 AT1G21560.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0014200 AT4G32300.1 S-domain-2 5 0 S-domain-2 5;(source:Araport11) Ipc15G0014190 AT5G49920.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc15G0014180 AT2G26170.1 cytochrome P450, family 711, subfamily A, polypeptide 1 Encodes a protein with similarity to thromboxane-A synthase, member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3,4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus, no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS, CHI, F3H, F3'H, FLS, DFR, ANS, UFGT, RT, AAC and GST). cytochrome P450, family 711, subfamily A, polypeptide 1;(source:Araport11) Ipc15G0014170 AT3G13850.1 LOB domain-containing protein 22 0 LOB domain-containing protein 22;(source:Araport11) Ipc15G0014160 AT4G33030.1 sulfoquinovosyldiacylglycerol 1 involved in sulfolipid biosynthesis The mRNA is cell-to-cell mobile. sulfoquinovosyldiacylglycerol 1;(source:Araport11) Ipc15G0014150 AT5G13240.2 0 Global repressor of RNA polymerase III (Pol III). Maf1 repressor activity is critical for plant survival during environmental stresses, and is regulated by its phosphorylation/dephosphorylation through the activity of TOR and PP4/PP2A phosphatases. transcription regulator;(source:Araport11) Ipc15G0014140 AT1G55110.3 0 0 indeterminate(ID)-domain 7;(source:Araport11) Ipc15G0014130 AT2G19480.3 nucleosome assembly protein 1;2 This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination. nucleosome assembly protein 1;(source:Araport11) Ipc15G0014120 AT2G26170.1 cytochrome P450, family 711, subfamily A, polypeptide 1 Encodes a protein with similarity to thromboxane-A synthase, member of the CYP711A cytochrome P450 family. MAX1 is a specific repressor of vegetative axillary buds generated by the axillary meristem. Expressed in vascular traces in the rosette stem and axillary buds throughout plant development. Mutants have increased axillary branches. Along with MAX3,4 thought to mediate control of shoot branching via synthesis of a signal molecule which is transported over long distance mediated by MAX2. cDNA supports the existence of the longer transcript predicted for this locus, no cDNA isolated for shorter transcript. MAX1 downregulates 11 genes involved in flavonoid pathway (CHS, CHI, F3H, F3'H, FLS, DFR, ANS, UFGT, RT, AAC and GST). cytochrome P450, family 711, subfamily A, polypeptide 1;(source:Araport11) Ipc15G0014110 AT2G26180.1 IQ-domain 6 Transient Expression of Pro35S:YFP-IQD5 in leaves of N. benthamiana alters microtubule organization. IQ-domain 6;(source:Araport11) Ipc15G0014100 AT4G33050.3 calmodulin-binding family protein Encodes a calmodulin-binding protein involved in stomatal movement. calmodulin-binding family protein;(source:Araport11) Ipc15G0014090 AT3G01380.1 transferases;sulfuric ester hydrolases;catalytics;transferases 0 sulfatase and phosphatidylinositolglycan class N domain-containing protein;(source:Araport11) Ipc15G0014080 AT3G57940.2 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) 0 GNAT acetyltransferase (DUF699);(source:Araport11) Ipc15G0014070 AT2G18210.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000510 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0000520 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc02G0000530 AT4G39500.1 cytochrome P450, family 96, subfamily A, polypeptide 11 0 cytochrome P450, family 96, subfamily A, polypeptide 11;(source:Araport11) Ipc02G0000540 AT5G08415.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc02G0000550 AT5G08570.3 0 0 Pyruvate kinase family protein;(source:Araport11) Ipc02G0000560 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0000570 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0001830 AT5G23070.1 Thymidine kinase Encodes a thymidine kinase that salvages DNA precursors. The pyrimidine salvage pathway is crucial for chloroplast development and genome replication, as well as for the maintenance of its integrity. Thymidine kinase;(source:Araport11) Ipc07G0001840 AT5G56510.5 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc07G0001850 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0001860 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc07G0006090 AT4G03500.3 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc07G0006100 AT4G03490.4 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc14G0001610 AT1G12420.1 ACT domain repeat 8 0 ACT domain repeat 8;(source:Araport11) Ipc14G0001600 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc14G0001590 AT1G48095.1 0 0 nucleic acid-binding/zinc ion-binding protein;(source:Araport11) Ipc14G0001580 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc14G0001570 AT4G12080.1 AT-hook motif nuclear-localized protein 1 0 AT-hook motif nuclear-localized protein 1;(source:Araport11) Ipc14G0001560 AT1G12390.1 Cornichon family protein 0 Cornichon family protein;(source:Araport11) Ipc14G0001550 AT2G27830.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0001540 AT4G22758.1 0 0 PPR containing protein;(source:Araport11) Ipc14G0001530 AT1G12380.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0001520 AT1G12360.1 Sec1/munc18-like (SM) proteins superfamily encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis. Sec1/munc18-like (SM) proteins superfamily;(source:Araport11) Ipc14G0001510 AT1G12330.1 0 0 cyclin-dependent kinase-like protein;(source:Araport11) Ipc14G0001500 AT4G22740.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc14G0001490 AT4G12130.1 Glycine cleavage T-protein family Encodes a mitochondrial COG0354 protein that requires folate for its function in Fe/S cluster biogenesis. Glycine cleavage T-protein family;(source:Araport11) Ipc14G0001480 AT4G22730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0001470 AT1G62810.1 Copper amine oxidase family protein Encodes COPPER AMINE OXIDASE1 (CuAO1). Contributes to abscisic acid- and polyamine-induced nitric oxide biosynthesis and abscisic acid signal transduction. Copper amine oxidase family protein;(source:Araport11) Ipc14G0001460 AT4G12300.1 cytochrome P450, family 706, subfamily A, polypeptide 4 member of CYP706A cytochrome P450, family 706, subfamily A, polypeptide 4;(source:Araport11) Ipc14G0001450 AT1G79740.4 0 0 hAT transposon superfamily;(source:Araport11) Ipc14G0001440 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc14G0001430 AT4G22680.1 myb domain protein 85 Encodes a putative transcription factor (MYB85). myb domain protein 85;(source:Araport11) Ipc11G0007930 AT1G22670.1 Protease-associated (PA) RING/U-box zinc finger family protein 0 Protease-associated (PA) RING/U-box zinc finger family protein;(source:Araport11) Ipc14G0005120 AT5G57800.1 Fatty acid hydroxylase superfamily encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. The mRNA is cell-to-cell mobile. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc14G0005110 AT5G57790.4 0 0 hypothetical protein;(source:Araport11) Ipc14G0005100 AT2G19160.2 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc14G0005090 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0005080 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0005070 AT4G31970.1 cytochrome P450, family 82, subfamily C, polypeptide 2 Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. CYP82C2 acts as a hydroxylase on indole-3-carbonyl nitrile to generate 4-OH-ICN. cytochrome P450, family 82, subfamily C, polypeptide 2;(source:Araport11) Ipc14G0005060 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0005050 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0005040 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc14G0005030 AT4G31950.1 cytochrome P450, family 82, subfamily C, polypeptide 3 member of CYP82C cytochrome P450, family 82, subfamily C, polypeptide 3;(source:Araport11) Ipc14G0005020 AT4G31970.1 cytochrome P450, family 82, subfamily C, polypeptide 2 Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. CYP82C2 acts as a hydroxylase on indole-3-carbonyl nitrile to generate 4-OH-ICN. cytochrome P450, family 82, subfamily C, polypeptide 2;(source:Araport11) Ipc14G0005010 AT4G30110.2 0 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc heavy metal atpase 2;(source:Araport11) Ipc14G0005000 AT4G31970.1 cytochrome P450, family 82, subfamily C, polypeptide 2 Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. CYP82C2 acts as a hydroxylase on indole-3-carbonyl nitrile to generate 4-OH-ICN. cytochrome P450, family 82, subfamily C, polypeptide 2;(source:Araport11) Ipc14G0004990 AT2G19090.1 Protein of unknown function (DUF630 and DUF632) 0 DUF630 family protein (DUF630 and DUF632);(source:Araport11) Ipc14G0004980 AT2G39050.1 hydroxyproline-rich glycoprotein family protein Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc14G0004970 AT4G25810.1 xyloglucan endotransglycosylase 6 xyloglucan endotransglycosylase-related protein (XTR6) xyloglucan endotransglycosylase 6;(source:Araport11) Ipc14G0004960 AT1G67235.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0004950 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0004940 AT1G21970.1 Histone superfamily protein Transcriptional activator of genes required for both embryo maturation and cellular differentiation. Sequence is similar to HAP3 subunit of the CCAAT-box binding factor. HAP3 subunit is divided into three domains: an amino-terminal A domain, a central B domain, and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central, B domain. LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation. It was sufficient to induce embryogenic programs in vegetative cells, suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development. Mutants are desiccation intolerant, have trichomes on cotyledons and exhibit precocious meristem activation. Levels of the ABI3 and FUS3 transcripts were significantly reduced in developing siliques of the lec1-1 mutants, indicating that LEC1 down-regulates FUS3 and ABI3.When LEC1 is overexpressed from an inducible promoter, the expression of numerous genes involved in fatty acid biosynthesis is increased suggesting a role in positive regulation of FA biosynthesis. Histone superfamily protein;(source:Araport11) Ipc14G0004930 AT5G35390.1 Leucine-rich repeat protein kinase family protein Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0004920 AT4G03292.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc14G0004910 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc14G0004900 AT4G15880.1 Cysteine proteinases superfamily protein EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile. Cysteine proteinases superfamily protein;(source:Araport11) Ipc14G0004890 AT2G24070.3 0 0 QWRF motif protein (DUF566);(source:Araport11) Ipc14G0004880 AT5G57870.2 MIF4G domain-containing protein / MA3 domain-containing protein Encodes a putative eukaryotic translation initiation factor The mRNA is cell-to-cell mobile. MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11) Ipc14G0004870 AT5G57900.1 SKP1 interacting partner 1 F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner SKP1 interacting partner 1;(source:Araport11) Ipc14G0004860 AT5G57920.2 0 0 early nodulin-like protein 10;(source:Araport11) Ipc14G0004850 AT2G23980.9 0 Encodes a cyclic GMP-activated non-selective cation channel in the plasma membrane of guard cells. cyclic nucleotide-gated channel 6;(source:Araport11) Ipc14G0004840 AT5G25100.1 Endomembrane protein 70 protein family 0 Endomembrane protein 70 protein family;(source:Araport11) Ipc14G0004830 AT5G57950.1 26S proteasome regulatory subunit, putative 0 26S proteasome regulatory subunit;(source:Araport11) Ipc14G0004820 AT1G17690.1 0 0 U3 small nucleolar RNA-associated protein;(source:Araport11) Ipc14G0004810 AT5G57970.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc14G0004800 AT4G30935.1 WRKY DNA-binding protein 32 member of WRKY Transcription Factor; Group I WRKY DNA-binding protein 32;(source:Araport11) Ipc14G0004790 AT3G49400.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc14G0004780 AT2G25740.2 0 0 ATP-dependent protease La (LON) domain protein;(source:Araport11) Ipc14G0004770 AT5G57700.1 BNR/Asp-box repeat family protein 0 BNR/Asp-box repeat family protein;(source:Araport11) Ipc14G0004760 AT2G24220.2 purine permease 5 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. purine permease 5;(source:Araport11) Ipc14G0004750 AT1G13950.1 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. eukaryotic elongation factor 5A-1;(source:Araport11) Ipc14G0004740 AT2G24230.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0004730 AT5G58000.1 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc14G0004720 AT2G24290.1 Protein of unknown function (DUF1068) 0 ubiquitin-associated protein (DUF1068);(source:Araport11) Ipc14G0004710 AT2G25180.1 response regulator 12 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 12;(source:Araport11) Ipc14G0004700 AT4G31020.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc14G0004690 AT4G19810.2 0 ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.The mRNA is cell-to-cell mobile. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc14G0004680 AT4G19810.2 0 ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.The mRNA is cell-to-cell mobile. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein;(source:Araport11) Ipc14G0004670 #N/A #N/A #N/A #N/A Ipc14G0004660 #N/A #N/A #N/A #N/A Ipc14G0004650 AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc14G0004640 AT3G46920.1 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc14G0004630 AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0004620 AT5G35110.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0004610 AT3G09850.1 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc14G0004600 AT4G02050.2 0 STP7 is a monosaccharide/H+ symporter that transports arabinose and xylose. sugar transporter protein 7;(source:Araport11) Ipc14G0004590 AT5G35180.2 Protein of unknown function (DUF1336) 0 ENHANCED DISEASE RESISTANCE protein (DUF1336);(source:Araport11) Ipc14G0004580 AT1G80660.1 H(+)-ATPase 9 0 H[+]-ATPase 9;(source:Araport11) Ipc02G0007490 AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc02G0007480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0007470 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0007460 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc02G0007450 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc02G0007440 #N/A #N/A #N/A #N/A Ipc02G0007430 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc08G0009790 AT2G01270.3 0 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain. quiescin-sulfhydryl oxidase 2;(source:Araport11) Ipc08G0009780 AT5G03250.2 0 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0009800 AT1G56300.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc08G0009810 AT5G09530.1 hydroxyproline-rich glycoprotein family protein The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0009820 AT2G47470.1 thioredoxin family protein Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. The mRNA is cell-to-cell mobile. thioredoxin family protein;(source:Araport11) Ipc08G0009830 AT5G20490.3 0 Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. Required for fast root hair growth. This gene appears to be expressed at low levels throughout the plant. myosin family protein with Dil;(source:Araport11) Ipc08G0009840 AT2G22426.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009850 AT1G35670.1 calcium-dependent protein kinase 2 Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 2;(source:Araport11) Ipc08G0009860 #N/A #N/A #N/A #N/A Ipc08G0009870 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc08G0009880 AT1G33360.1 ATP-dependent Clp protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease;(source:Araport11) Ipc08G0009890 AT5G40010.1 AAA-ATPase 1 Encodes a mitochondrial ATPase involved in seed and silique development. AAA-ATPase 1;(source:Araport11) Ipc08G0009900 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc08G0009910 AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc08G0009920 AT1G09190.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0009930 AT3G62560.1 Ras-related small GTP-binding family protein 0 Ras-related small GTP-binding family protein;(source:Araport11) Ipc08G0009940 AT3G16950.1 lipoamide dehydrogenase 1 encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds. lipoamide dehydrogenase 1;(source:Araport11) Ipc08G0009950 AT1G56340.2 calreticulin 1a Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Post-transcriptionally regulates together with CRT2 VAMP721/722 levels under ER stress. calreticulin 1a;(source:Araport11) Ipc08G0009960 AT1G22100.1 Inositol-pentakisphosphate 2-kinase family protein 0 Inositol-pentakisphosphate 2-kinase family protein;(source:Araport11) Ipc08G0009970 #N/A #N/A #N/A #N/A Ipc08G0009980 AT2G04160.1 Subtilisin-like serine endopeptidase family protein isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc08G0009990 AT2G04160.1 Subtilisin-like serine endopeptidase family protein isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. Subtilisin-like serine endopeptidase family protein;(source:Araport11) Ipc08G0010000 AT5G03905.1 Iron-sulphur cluster biosynthesis family protein 0 Iron-sulfur cluster biosynthesis family protein;(source:Araport11) Ipc08G0010010 AT5G59810.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc08G0010020 AT1G56350.1 Peptide chain release factor 2 0 Peptide chain release factor 2;(source:Araport11) Ipc08G0010030 AT1G56420.1 0 0 antigenic heat-stable protein;(source:Araport11) Ipc08G0010040 AT2G24100.1 0 0 ATP-dependent DNA helicase;(source:Araport11) Ipc08G0010050 AT5G26860.1 lon protease 1 Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. The mRNA is cell-to-cell mobile. lon protease 1;(source:Araport11) Ipc08G0010060 AT3G23880.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0010070 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc08G0010080 AT3G62420.1 basic region/leucine zipper motif 53 Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene. basic region/leucine zipper motif 53;(source:Araport11) Ipc08G0010090 AT1G56423.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0010100 AT1G02560.1 nuclear encoded CLP protease 5 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). The mRNA is cell-to-cell mobile. nuclear encoded CLP protease 5;(source:Araport11) Ipc08G0010110 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc02G0006070 AT1G11112.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0002170 AT1G03260.1 SNARE associated Golgi protein family 0 SNARE associated Golgi protein family;(source:Araport11) Ipc04G0002180 AT5G18970.1 AWPM-19-like family protein 0 AWPM-19-like family protein;(source:Araport11) Ipc04G0002190 AT5G35630.3 glutamine synthetase 2 chloroplastic glutamine synthetase The mRNA is cell-to-cell mobile. glutamine synthetase 2;(source:Araport11) Ipc04G0002200 #N/A #N/A #N/A #N/A Ipc10G0010940 AT1G20270.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0010930 AT1G76070.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0010920 AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain 0 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11) Ipc10G0010910 AT4G38430.1 rho guanyl-nucleotide exchange factor 1 Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. ropgef1 mutants have defects in auxin transport that result in abnormal development of embryos and growth defects. rho guanyl-nucleotide exchange factor 1;(source:Araport11) Ipc10G0010900 AT2G15290.1 translocon at inner membrane of chloroplasts 21 Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma. translocon at inner membrane of chloroplasts 21;(source:Araport11) Ipc10G0010890 AT1G76140.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc10G0010880 AT1G41830.1 SKU5-similar 6 0 SKU5-similar 6;(source:Araport11) Ipc10G0010870 AT5G42220.2 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc10G0010860 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0010850 AT1G20510.1 OPC-8:0 CoA ligase1 0 OPC-8:0 CoA ligase1;(source:Araport11) Ipc10G0010840 AT5G42290.1 transcription activator-related 0 transcription activator-like protein;(source:Araport11) Ipc10G0010830 AT1G76250.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0010820 AT4G09750.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0010810 AT5G03650.1 starch branching enzyme 2.2 Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves. starch branching enzyme 2.2;(source:Araport11) Ipc10G0010800 AT4G23580.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc10G0010790 AT4G38280.1 0 0 integral membrane hemolysin-III-like protein;(source:Araport11) Ipc10G0010780 AT4G35090.1 catalase 2 Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2). catalase 2;(source:Araport11) Ipc10G0010770 AT1G42470.1 Patched family protein 0 Patched family protein;(source:Araport11) Ipc10G0010760 AT1G76360.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0010750 AT1G20650.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0010740 AT4G37420.1 Domain of unknown function (DUF23) 0 glycosyltransferase family protein (DUF23);(source:Araport11) Ipc10G0010730 AT1G42480.1 0 0 TLR4 regulator/MIR-interacting MSAP protein;(source:Araport11) Ipc10G0010720 AT2G17480.1 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc10G0010710 AT3G50310.1 mitogen-activated protein kinase kinase kinase 20 Encodes a member of MEKK subfamily. Target promoter of the male germline-specific transcription factor DUO1. Involved in osmotic stress response via regulation of MPK6 activity. It also plays an important role in regulating cell division and cell elongation in the primary root meristematic and elongation areas. Mutants show defects in root microtubule organization.It phosphorylates MPK18 and MKK3.It is a positive regulator of ABA-induced stomatal closure that acts by phosphorylating MKK5. mitogen-activated protein kinase kinase kinase 20;(source:Araport11) Ipc10G0010700 AT1G20823.1 RING/U-box superfamily protein Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile. RING/U-box superfamily protein;(source:Araport11) Ipc10G0010690 AT4G35350.1 xylem cysteine peptidase 1 tracheary element vacuolar protein xylem cysteine peptidase 1;(source:Araport11) Ipc10G0010680 AT3G44590.2 60S acidic ribosomal protein family 0 60S acidic ribosomal protein family;(source:Araport11) Ipc10G0010670 AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. Jojoba acyl CoA reductase-related male sterility protein;(source:Araport11) Ipc10G0010660 AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0010650 AT1G30515.1 0 0 GATA zinc finger protein;(source:Araport11) Ipc10G0010640 AT2G27550.1 centroradialis encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations. It acts non-cell autonomously to inhibit floral initiation. centroradiali;(source:Araport11) Ipc10G0010630 AT3G44510.2 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0010620 AT2G27310.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0010610 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0010600 AT5G22450.3 0 0 spectrin beta chain, brain;(source:Araport11) Ipc10G0010590 AT1G08320.4 0 0 bZIP transcription factor family protein;(source:Araport11) Ipc10G0010580 AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein 0 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein;(source:Araport11) Ipc10G0010570 AT2G27510.1 ferredoxin 3 0 ferredoxin 3;(source:Araport11) Ipc10G0010560 AT5G45540.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc10G0010550 AT5G45540.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc10G0010540 AT5G45540.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc10G0010530 AT5G45480.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc10G0010520 AT5G45480.1 Protein of unknown function (DUF594) 0 transmembrane protein, putative (DUF594);(source:Araport11) Ipc10G0010510 AT2G27470.1 nuclear factor Y, subunit B11 0 nuclear factor Y, subunit B11;(source:Araport11) Ipc10G0010500 AT2G40650.1 PRP38 family protein 0 PRP38 family protein;(source:Araport11) Ipc10G0010490 AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein Encodes a protein, expressed in leaves, with similarity to pollen allergens. The mRNA is cell-to-cell mobile. Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc10G0010480 AT5G22400.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc10G0010470 AT5G22390.1 Protein of unknown function (DUF3049) 0 FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc10G0010460 #N/A #N/A #N/A #N/A Ipc10G0010450 AT5G22430.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc10G0010440 AT5G22380.1 NAC domain containing protein 90 0 NAC domain containing protein 90;(source:Araport11) Ipc10G0010430 AT5G22360.1 vesicle-associated membrane protein 714 Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. vesicle-associated membrane protein 714;(source:Araport11) Ipc10G0010420 AT5G22350.1 Protein of unknown function (DUF1022) 0 fission ELM1-like protein (DUF1022);(source:Araport11) Ipc10G0010410 AT2G27370.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc10G0010400 AT3G11590.1 0 0 golgin family A protein;(source:Araport11) Ipc10G0010390 AT2G27300.1 NTM1-like 8 NTL8 is a membrane-associated NAC transcription factor that binds both TRY and TCL1. Overexpression results in fewer trichomes. NTM1-like 8;(source:Araport11) Ipc10G0010380 AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0010370 AT2G36060.1 MMS ZWEI homologue 3 MMZ3/UEV1C encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1C can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ3/UEV1C transcripts are found at moderate levels in most plant organs, but cannot be detected in the pollen or 2 days after germination. Transcript levels do not appear to be stress-inducible. MMS ZWEI homologue 3;(source:Araport11) Ipc10G0010360 AT3G52525.1 ovate family protein 6 0 ovate family protein 6;(source:Araport11) Ipc10G0010350 AT1G11950.2 0 0 Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc10G0010340 AT5G22220.2 E2F transcription factor 1 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. E2F transcription factor 1;(source:Araport11) Ipc10G0010330 AT5G22210.2 0 0 aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B;(source:Araport11) Ipc10G0010320 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc10G0010310 AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc10G0010300 AT3G44200.2 0 Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. serine/threonine-protein kinase NEK5;(source:Araport11) Ipc10G0010290 AT1G66150.1 transmembrane kinase 1 receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1;(source:Araport11) Ipc10G0010280 AT1G08460.1 histone deacetylase 8 0 histone deacetylase 8;(source:Araport11) Ipc10G0010270 AT1G08440.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc10G0010250 AT5G19750.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc10G0010260 AT2G35390.4 0 0 Phosphoribosyltransferase family protein;(source:Araport11) Ipc10G0010240 AT5G57280.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Gene encodes a methyltransferase-like protein involved in pre-rRNA processing. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc10G0010230 AT5G12060.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc10G0010220 AT5G22090.2 Protein of unknown function (DUF3049) EAR1 is a negative regulator of ABA signaling that enhances the activity of all six clade A PP2Cs (ABI1, ABI2, HAB1, HAB2, AHG1, AHG3) by interacting with and releasing the N-terminal autoinhibition of these proteins. EAR1 indirectly affects OST1 activity through enhancing ABI1 activity. The EAR1 141-287 fragment is sufficient for the functioning of EAR1 in ABA responses; the 131-248 region harbors an intrinsically disordered region and only 249-278 can form a predicted regular structure. EAR1 is located in the ER, nuclei, and cytoplasm; ABA signaling promotes the translocation of EAR1 from the ER and/or cytoplasm to the nucleus. Mutations showed that it functions in seed germination, primary root growth, and drought tolerance. FAF-like protein (DUF3049);(source:Araport11) Ipc10G0010210 AT3G49601.1 0 0 pre-mRNA-splicing factor;(source:Araport11) Ipc10G0010200 AT1G08470.1 strictosidine synthase-like 3 Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. strictosidine synthase-like 3;(source:Araport11) Ipc10G0010190 AT5G22010.1 replication factor C1 Encodes RFC1, the largest subunit of replication factor C. Mediates genomic stability and transcriptional gene silencing. replication factor C1;(source:Araport11) Ipc10G0010180 AT1G08480.1 Encode subunit 6 of mitochondrial complex II and participates in the respiratory chain. It contributes to anchoring succinate dehydrogenase to the inner mitochondrial membrane. The mRNA is cell-to-cell mobile. Encodes subunit 6 of mitochondrial complex II (succinate dehydrogenase complex) and participates in the respiratory chain. It contributes to anchoring succinate dehydrogenase to the inner mitochondrial membrane. The mRNA is cell-to-cell mobile. succinate dehydrogenase subunit;(source:Araport11) Ipc10G0010170 AT5G22000.2 RING-H2 group F2A encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. RING-H2 group F2A;(source:Araport11) Ipc10G0010160 AT1G06840.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0010150 AT1G76650.3 calmodulin-like 38 0 calmodulin-like 38;(source:Araport11) Ipc10G0010140 AT5G19430.6 0 Encodes a C3HC4-type RING finger E3 ubiquitin ligase of the RING/U-box superfamily whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. RING/U-box superfamily protein;(source:Araport11) Ipc10G0010130 AT5G20970.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc10G0010120 AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) Ipc10G0010110 AT2G27170.2 Structural maintenance of chromosomes (SMC) family protein Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. Structural maintenance of chromosomes (SMC) family protein;(source:Araport11) Ipc10G0010100 AT5G04885.2 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010090 AT5G20950.2 Glycosyl hydrolase family protein Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010080 AT5G20950.2 Glycosyl hydrolase family protein Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010070 AT5G04885.2 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010060 AT5G04885.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010050 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010040 AT5G20950.3 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc10G0010030 AT2G15240.1 UNC-50 family protein 0 UNC-50 family protein;(source:Araport11) Ipc10G0010020 AT2G23790.1 Protein of unknown function (DUF607) 0 calcium uniporter (DUF607);(source:Araport11) Ipc10G0010010 AT3G19460.5 0 0 Reticulon family protein;(source:Araport11) Ipc10G0010000 AT2G27150.2 abscisic aldehyde oxidase 3 Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis. abscisic aldehyde oxidase 3;(source:Araport11) Ipc10G0009990 AT2G27150.6 0 Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis. abscisic aldehyde oxidase 3;(source:Araport11) Ipc10G0009980 AT5G20960.2 aldehyde oxidase 1 Encodes aldehyde oxidase AA01. aldehyde oxidase 1;(source:Araport11) Ipc10G0009970 AT5G20970.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc10G0009960 AT5G17920.2 Cobalamin-independent synthase family protein Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile. Cobalamin-independent synthase family protein;(source:Araport11) Ipc10G0009950 AT3G20770.1 Ethylene insensitive 3 family protein Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores. Ethylene insensitive 3 family protein;(source:Araport11) Ipc10G0009940 AT2G27090.2 0 0 bZIP transcription factor (DUF630 and DUF632);(source:Araport11) Ipc10G0009930 AT5G21070.1 0 0 Fe(3+) dicitrate transport system permease;(source:Araport11) Ipc10G0009920 AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc10G0009910 AT2G27110.2 FAR1-related sequence 3 0 FAR1-related sequence 3;(source:Araport11) Ipc10G0009900 AT2G24190.1 NAD(P)-binding Rossmann-fold superfamily protein Encodes an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. In addition, this enzyme can reduce methylglyoxal in vitro. It is believed that this enzyme localizes to the cytosol like the closely related protein encoded by AT3G61220. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0009890 AT5G21040.3 0 Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. F-box protein 2;(source:Araport11) Ipc10G0009880 AT2G21530.1 SMAD/FHA domain-containing protein 0 SMAD/FHA domain-containing protein;(source:Araport11) Ipc10G0009870 AT5G06100.1 myb domain protein 33 Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity. myb domain protein 33;(source:Araport11) Ipc10G0009850 AT1G18010.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc10G0009860 AT2G26760.1 Cyclin B1;4 0 Cyclin B1;(source:Araport11) Ipc10G0009840 AT5G12290.4 0 Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background. dgd1 suppressor 1;(source:Araport11) Ipc10G0009830 AT3G25820.2 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009820 AT3G25820.4 0 Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009810 AT3G25820.4 0 Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009800 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009780 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009770 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009790 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc10G0009760 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0009750 AT2G24210.1 terpene synthase 10 0 terpene synthase 10;(source:Araport11) Ipc10G0009740 AT3G12490.1 cystatin B Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress). cystatin B;(source:Araport11) Ipc10G0009730 AT5G19490.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc10G0009720 AT2G26920.1 Ubiquitin-associated/translation elongation factor EF1B protein 0 Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11) Ipc10G0009710 AT5G12110.1 Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6 0 elongation factor 1-beta 1;(source:Araport11) Ipc10G0009700 AT3G48480.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc10G0009690 AT2G27040.2 Argonaute family protein AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens including Tobacco rattle virus. Argonaute family protein;(source:Araport11) Ipc10G0009680 AT2G27030.3 calmodulin 5 encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile. calmodulin 5;(source:Araport11) Ipc10G0009670 AT2G26980.3 CBL-interacting protein kinase 3 encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. CBL-interacting protein kinase 3;(source:Araport11) Ipc10G0009660 AT3G04840.1 Ribosomal protein S3Ae 0 Ribosomal protein S3Ae;(source:Araport11) Ipc10G0009650 AT2G26770.3 0 Encodes a plant-specific actin binding protein SCAB1 (STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN1). SCAB1 stabilizes actin filaments and regulates stomatal movement. plectin-like protein;(source:Araport11) Ipc10G0009640 #N/A #N/A #N/A #N/A Ipc10G0009630 AT1G09780.1 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent;(source:Araport11) Ipc10G0009620 AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0009610 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0009600 AT5G55390.3 0 Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression. ENHANCED DOWNY MILDEW 2;(source:Araport11) Ipc10G0009590 AT5G12180.1 calcium-dependent protein kinase 17 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17;(source:Araport11) Ipc10G0009580 AT3G12250.7 0 basic leucine zipper transcription factor involved in the activation of SA-responsive genes. TGACG motif-binding factor 6;(source:Araport11) Ipc10G0009570 AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein 0 RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc10G0009560 AT5G12200.1 pyrimidine 2 Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism. pyrimidine 2;(source:Araport11) Ipc10G0009550 AT2G32560.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc10G0009540 AT2G26530.1 Protein of unknown function (DUF1645) Pheromone receptor-like protein involved in the early elicitor signaling events which occur within minutes and include ion fluxes across the plasma membrane, activation of MPKs and the formation of ROS related to PGPS1 and WRKY33. AR781, pheromone receptor-like protein (DUF1645);(source:Araport11) Ipc10G0009530 AT2G26840.1 0 Encodes a Holliday junction resolvase that binds and cleaves the core of Holliday junctions symmetrically. It appears to mediate chloroplast nucleoid segregation during chloroplast division. MutS2;(source:Araport11) Ipc10G0009520 AT1G63500.1 Protein kinase protein with tetratricopeptide repeat domain 0 kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11) Ipc10G0009500 AT5G19390.2 Rho GTPase activation protein (RhoGAP) with PH domain Encodes a protein with similarity to REN1, a Rho GTPase activating protein.It is cytoplasmic and plasma membrane associated in interphase, but during mitosis localizes to the CDZ/CDS in a POK-dependent manner. Rho GTPase activation protein (RhoGAP) with PH domain-containing protein;(source:Araport11) Ipc10G0009510 AT4G24610.4 0 0 pesticidal crystal cry8Ba protein;(source:Araport11) Ipc10G0009490 AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc10G0009480 AT5G48120.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc10G0009470 AT3G57090.2 0 Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0009460 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc10G0009450 AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0009440 AT2G13360.3 0 Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration. alanine:glyoxylate aminotransferase;(source:Araport11) Ipc10G0009430 AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 2 APO RNA-binding protein (DUF794);(source:Araport11) Ipc10G0009420 AT1G50420.1 scarecrow-like 3 Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). scarecrow-like 3;(source:Araport11) Ipc10G0009410 AT5G12400.1 DNA binding;zinc ion binding;DNA binding 0 PHD-finger and DNA binding domain-containing protein;(source:Araport11) Ipc13G0018020 AT1G49245.1 Prefoldin chaperone subunit family protein 0 Prefoldin chaperone subunit family protein;(source:Araport11) Ipc13G0018040 AT2G35620.4 0 Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.Mucilage is easily detached from fei2 mutants seeds, and forms a capsule that is >50% smaller relative to wild-type. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0018070 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc13G0018080 ATMG00580.1 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4 NADH dehydrogenase subunit 4;(source:Araport11) Ipc13G0018090 AT2G07707.1 Plant mitochondrial ATPase, F0 complex, subunit 8 protein 0 Plant mitochondrial ATPase, F0 complex, subunit 8 protein;(source:Araport11) Ipc13G0018100 AT2G07687.1 Cytochrome c oxidase, subunit III 0 Cytochrome c oxidase, subunit III;(source:Araport11) Ipc13G0018110 AT4G08450.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc13G0018120 AT5G17610.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0018130 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0018140 AT5G58280.2 0 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0018150 AT5G17640.1 Protein of unknown function (DUF1005) Expression of this gene is induced by abscisic acid and salt stress. nuclear factor 1 A-type protein (DUF1005);(source:Araport11) Ipc13G0018160 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc13G0018170 AT5G17640.1 Protein of unknown function (DUF1005) Expression of this gene is induced by abscisic acid and salt stress. nuclear factor 1 A-type protein (DUF1005);(source:Araport11) Ipc13G0018180 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc13G0018190 AT4G23470.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc13G0018200 #N/A #N/A #N/A #N/A Ipc13G0018210 AT1G01350.1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 0 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11) Ipc13G0018220 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0018230 AT3G24160.1 putative type 1 membrane protein Encodes a putative Type 1 membrane protein (PMP). putative type 1 membrane protein;(source:Araport11) Ipc13G0018240 ATCG00170.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-2 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc13G0018250 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0018260 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0018270 AT5G17670.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0018280 AT5G26667.4 0 encodes a uridine 5 Prime-monophosphate (UMP)/cytidine 5 Prime-monophosphate (CMP) kinase.The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0018290 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0018300 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0018310 AT3G19720.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFP-ARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0018320 AT1G15320.2 0 0 seed dormancy control protein;(source:Araport11) Ipc13G0018330 AT2G44600.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0018340 AT2G20290.2 0 member of Myosin-like proteins myosin-like protein XIG;(source:Araport11) Ipc13G0018350 #N/A #N/A #N/A #N/A Ipc13G0018360 AT5G01430.2 Got1/Sft2-like vescicle transport protein family 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc13G0018370 AT2G44620.1 mitochondrial acyl carrier protein 1 Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble. The mRNA is cell-to-cell mobile. mitochondrial acyl carrier protein 1;(source:Araport11) Ipc13G0018380 AT5G46930.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc13G0018390 AT2G44670.1 Protein of unknown function (DUF581) 0 senescence-associated family protein (DUF581);(source:Araport11) Ipc13G0018400 AT1G65610.1 Six-hairpin glycosidases superfamily protein 0 Six-hairpin glycosidases superfamily protein;(source:Araport11) Ipc13G0018410 AT3G06250.3 0 0 FAR1-related sequence 7;(source:Araport11) Ipc13G0018420 AT5G47070.1 Protein kinase superfamily protein Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens. Protein kinase superfamily protein;(source:Araport11) Ipc13G0018430 AT3G60240.2 eukaryotic translation initiation factor 4G protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication. eukaryotic translation initiation factor 4G;(source:Araport11) Ipc13G0018440 AT1G02170.1 metacaspase 1 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 1;(source:Araport11) Ipc05G0019430 AT2G31620.1 Receptor-like protein kinase-related family protein 0 Receptor-like protein kinase-related family protein;(source:Araport11) Ipc05G0019410 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc05G0019420 AT3G16360.2 HPT phosphotransmitter 4 Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). HPT phosphotransmitter 4;(source:Araport11) Ipc05G0019400 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc05G0019390 AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein 0 tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11) Ipc05G0018970 AT2G37410.2 translocase inner membrane subunit 17-2 Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway. translocase inner membrane subunit 17-2;(source:Araport11) Ipc05G0019380 AT3G16490.1 IQ-domain 26 0 IQ-domain 26;(source:Araport11) Ipc05G0018950 AT5G19730.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0018930 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc05G0018910 AT5G56580.1 MAP kinase kinase 6 Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6;(source:Araport11) Ipc05G0018890 AT2G19760.1 profilin 1 first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues. profilin 1;(source:Araport11) Ipc05G0018870 AT3G50350.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc05G0019350 AT1G31870.2 0 0 pre-mRNA-splicing factor of RES complex protein;(source:Araport11) Ipc05G0019340 AT4G29310.1 Protein of unknown function (DUF1005) 0 DUF1005 family protein (DUF1005);(source:Araport11) Ipc05G0019320 AT4G29270.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc05G0019300 AT4G29270.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc05G0018830 AT2G35680.1 Phosphotyrosine protein phosphatases superfamily protein Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc05G0018810 AT2G19790.1 SNARE-like superfamily protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. SNARE-like superfamily protein;(source:Araport11) Ipc05G0018790 AT4G29210.1 gamma-glutamyl transpeptidase 4 The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32. gamma-glutamyl transpeptidase 4;(source:Araport11) Ipc05G0019290 AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc05G0019280 AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc05G0019270 AT2G19830.2 0 0 SNF7 family protein;(source:Araport11) Ipc05G0019250 AT2G19740.1 Ribosomal protein L31e family protein 0 Ribosomal protein L31e family protein;(source:Araport11) Ipc05G0018710 AT2G19680.2 Mitochondrial ATP synthase subunit G protein 0 Mitochondrial ATP synthase subunit G protein;(source:Araport11) Ipc05G0018730 AT1G04260.1 CAMV movement protein interacting protein 7 Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors. CAMV movement protein interacting protein 7;(source:Araport11) Ipc05G0018690 AT3G14430.1 0 0 GRIP/coiled-coil protein;(source:Araport11) Ipc05G0019230 AT4G26200.1 1-amino-cyclopropane-1-carboxylate synthase 7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7;(source:Araport11) Ipc05G0018650 AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65b. U2 snRNP auxilliary factor, large subunit, splicing factor;(source:Araport11) Ipc05G0019220 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc05G0019210 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc05G0019200 AT1G35710.1 Protein kinase family protein with leucine-rich repeat domain 0 kinase family with leucine-rich repeat domain-containing protein;(source:Araport11) Ipc05G0019190 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc08G0003070 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003060 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0019880 AT1G65650.1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 0 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1;(source:Araport11) Ipc10G0019890 AT4G10360.3 0 0 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11) Ipc10G0019900 AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0019910 AT1G51520.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc01G0026750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0026760 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0026770 AT3G60030.1 squamosa promoter-binding protein-like 12 0 squamosa promoter-binding protein-like 12;(source:Araport11) Ipc01G0026780 AT3G24740.6 0 0 cellulose synthase, putative (DUF1644);(source:Araport11) Ipc10G0018830 AT5G05470.1 eukaryotic translation initiation factor 2 alpha subunit Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. eukaryotic translation initiation factor 2 alpha subunit;(source:Araport11) Ipc10G0018820 AT4G06479.1 zinc ion binding;nucleic acid binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc10G0018810 AT1G03010.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc10G0018800 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018790 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018770 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc10G0018760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018750 AT5G35790.1 glucose-6-phosphate dehydrogenase 1 Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1;(source:Araport11) Ipc14G0000760 AT2G25880.3 0 Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. ataurora2;(source:Araport11) Ipc14G0000790 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000800 AT4G26485.1 Domain of unknown function (DUF2431) 0 methyltransferase small domain protein;(source:Araport11) Ipc14G0000810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000820 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000830 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000840 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000850 AT4G12520.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc14G0000860 AT5G22794.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0004320 AT2G04480.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0000870 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc07G0000690 AT5G02070.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc07G0000700 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc07G0000710 AT1G77420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0000720 AT4G38500.1 Protein of unknown function (DUF616) 0 Sept9 (DUF616);(source:Araport11) Ipc07G0000730 AT2G37340.5 0 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc07G0000820 AT2G36630.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc07G0000740 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0000750 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0000760 AT1G04990.6 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0018360 AT1G77280.2 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc04G0018370 AT5G52560.1 UDP-sugar pyrophosphorylase Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility. UDP-sugar pyrophosphorylase;(source:Araport11) Ipc04G0018380 AT5G62370.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0018390 AT1G21560.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0018400 AT1G21580.1 Zinc finger C-x8-C-x5-C-x3-H type family protein Encodes a zinc-finger protein that co-localizes with the exosome-associated RNA helicase HEN2 and functions as a co-factor of nuclear RNA quality control by the nucleoplasmic exosome. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc04G0018410 AT5G18460.1 Protein of Unknown Function (DUF239) 0 carboxyl-terminal peptidase (DUF239);(source:Araport11) Ipc04G0018420 #N/A #N/A #N/A #N/A Ipc04G0018430 AT1G76990.5 ACT domain repeat 3 0 ACT domain repeat 3;(source:Araport11) Ipc01G0028990 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0028970 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc01G0028960 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028950 AT1G01990.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0028940 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0014700 AT2G43290.1 Calcium-binding EF-hand family protein Calmodulin-like MSS3.Encodes an endomembrane localized member of the CML subfamily VII. Contains a canonical CaM domain and unique N-terminal extension that distinguishes it from other members of the subfamily. Calcium-binding EF-hand family protein;(source:Araport11) Ipc04G0014690 AT1G73630.1 EF hand calcium-binding protein family 0 EF hand calcium-binding protein family;(source:Araport11) Ipc04G0014680 AT5G42870.1 phosphatidic acid phosphohydrolase 2 The PAH2 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 μM Pi. phosphatidic acid phosphohydrolase 2;(source:Araport11) Ipc04G0014670 AT5G63670.1 SPT4 homolog 2 0 SPT4 homolog 2;(source:Araport11) Ipc04G0014660 AT1G47380.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0014650 AT5G42700.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0014640 AT4G33380.1 0 0 dimethylallyl, adenosine tRNA methylthiotransferase;(source:Araport11) Ipc04G0014630 AT1G47410.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0014620 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0014610 AT2G26560.1 phospholipase A 2A Encodes a lipid acyl hydrolase with wide substrate specificity that accumulates upon infection by fungal and bacterial pathogens. Protein is localized in the cytoplasm in healthy leaves, and in membranes in infected cells. Plays a role in cell death and differentially affects the accumulation of oxylipins. Contributes to resistance to virus. phospholipase A 2A;(source:Araport11) Ipc04G0014600 AT4G34310.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0014590 AT4G11800.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc04G0014580 AT5G66815.1 0 0 transmembrane protein;(source:Araport11) Ipc04G0014570 AT1G47490.1 RNA-binding protein 47C 0 RNA-binding protein 47C;(source:Araport11) Ipc04G0014560 AT2G26540.1 uroporphyrinogen-III synthase family protein Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype uroporphyrinogen-III synthase family protein;(source:Araport11) Ipc04G0014550 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0014540 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0014530 AT3G63470.1 serine carboxypeptidase-like 40 0 serine carboxypeptidase-like 40;(source:Araport11) Ipc04G0014520 AT4G37080.3 Protein of unknown function, DUF547 0 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547);(source:Araport11) Ipc04G0014510 AT2G26530.2 Protein of unknown function (DUF1645) Pheromone receptor-like protein involved in the early elicitor signaling events which occur within minutes and include ion fluxes across the plasma membrane, activation of MPKs and the formation of ROS related to PGPS1 and WRKY33. AR781, pheromone receptor-like protein (DUF1645);(source:Araport11) Ipc04G0014500 AT5G36210.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0014490 AT5G42680.2 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc04G0014480 AT5G42680.2 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc04G0014470 AT3G50060.1 myb domain protein 77 Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes. myb domain protein 77;(source:Araport11) Ipc04G0014460 AT4G09680.4 0 Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance. conserved telomere maintenance component 1;(source:Araport11) Ipc04G0014450 AT5G66850.1 mitogen-activated protein kinase kinase kinase 5 Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens. mitogen-activated protein kinase kinase kinase 5;(source:Araport11) Ipc04G0014440 AT1G47720.1 Primosome PriB/single-strand DNA-binding Encodes an organellar single-strand DNA binding protein, located in mitochondria, controls the stoichiometry of alternative mitochondrial DNA forms generated by homologous recombination. Primosome PriB/single-strand DNA-binding protein;(source:Araport11) Ipc04G0014430 AT4G33300.2 ADR1-like 1 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. ADR1-like 1;(source:Araport11) Ipc04G0014420 AT3G14075.3 0 0 Mono-/di-acylglycerol lipase, N-terminal;(source:Araport11) Ipc04G0014410 AT4G00910.1 Aluminium activated malate transporter family protein 0 aluminum activated malate transporter family protein;(source:Araport11) Ipc04G0014400 AT1G47710.1 Serine protease inhibitor (SERPIN) family protein 0 Serine protease inhibitor (SERPIN) family protein;(source:Araport11) Ipc04G0014390 AT1G47310.1 0 0 signal peptidase I;(source:Araport11) Ipc04G0014380 AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein 0 Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11) Ipc04G0014370 AT1G47670.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc04G0014360 AT3G50410.1 OBF binding protein 1 Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development. OBF binding protein 1;(source:Araport11) Ipc04G0014350 AT1G62430.1 CDP-diacylglycerol synthase 1 Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis. CDP-diacylglycerol synthase 1;(source:Araport11) Ipc04G0014340 AT2G15880.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc04G0014330 AT3G18990.2 0 Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0014320 AT2G24700.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc04G0014310 AT3G18990.1 AP2/B3-like transcriptional factor family protein Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc04G0014300 AT1G47640.1 0 0 seven transmembrane domain protein;(source:Araport11) Ipc04G0014290 AT5G42630.1 Homeodomain-like superfamily protein Encodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis. Homeodomain-like superfamily protein;(source:Araport11) Ipc04G0014280 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc04G0014270 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc04G0014260 AT4G31970.1 cytochrome P450, family 82, subfamily C, polypeptide 2 Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. CYP82C2 acts as a hydroxylase on indole-3-carbonyl nitrile to generate 4-OH-ICN. cytochrome P450, family 82, subfamily C, polypeptide 2;(source:Araport11) Ipc04G0014250 AT4G31970.1 cytochrome P450, family 82, subfamily C, polypeptide 2 Functions in the biosynthesis of 4-hydroxy indole-3-carbonyl nitrile (4-OH-ICN), a cyanogenic phytoalexin in Arabidopsis. CYP82C2 acts as a hydroxylase on indole-3-carbonyl nitrile to generate 4-OH-ICN. cytochrome P450, family 82, subfamily C, polypeptide 2;(source:Araport11) Ipc04G0014240 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc04G0014230 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc04G0014220 AT2G26490.1 Transducin/WD40 repeat-like superfamily protein JGB contains seven WD40 repeats and is highly conserved in flowering plants. Overexpression inhibits pollen germination. suggesting JGB is a negative regulator of pollen germination Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0014210 AT2G23450.2 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0014200 AT1G48460.1 0 0 tRNA-processing ribonuclease BN;(source:Araport11) Ipc04G0014190 AT4G31050.1 Biotin/lipoate A/B protein ligase family 0 Biotin/lipoate A/B protein ligase family;(source:Araport11) Ipc04G0014180 AT4G19390.2 0 0 Uncharacterized protein family (UPF0114);(source:Araport11) Ipc04G0014170 AT1G47550.1 exocyst complex component sec3A Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. It binds phosphoinositide lipids. exocyst complex component sec3A;(source:Araport11) Ipc04G0014160 AT4G34370.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0014150 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc04G0014140 AT4G36870.2 BEL1-like homeodomain 2 Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves. BEL1-like homeodomain 2;(source:Araport11) Ipc04G0014130 AT1G19270.2 0 Encodes a ubiquitin-activated peptidase that is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. DA1;(source:Araport11) Ipc04G0014120 AT2G23770.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a putative LysM-containing receptor-like kinase LYK4. Shares overlapping function with LYK5 in mediating chitin-triggered immune responses. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc04G0014110 AT4G36850.1 PQ-loop repeat family protein / transmembrane family protein 0 PQ-loop repeat family protein / transmembrane family protein;(source:Araport11) Ipc04G0014100 AT1G19310.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0014090 AT5G42620.2 metalloendopeptidases;zinc ion binding 0 metalloendopeptidase / zinc ion binding protein;(source:Araport11) Ipc04G0014080 AT1G19330.2 0 Evening-expressed key component of Sin3-HDAC complex, which bind directly to the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) and PSEUDO-RESPONSE REGULATOR 9 (PRR9) promoters and catalyze histone 3 (H3) deacetylation at the cognate regions to repress expression, allowing the declining phase of their expression at dusk. histone deacetylase complex subunit;(source:Araport11) Ipc04G0014070 AT1G65910.1 NAC domain containing protein 28 0 NAC domain containing protein 28;(source:Araport11) Ipc04G0014060 AT4G36800.2 RUB1 conjugating enzyme 1 RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1. RUB1 conjugating enzyme 1;(source:Araport11) Ipc04G0014050 AT1G75080.2 Brassinosteroid signalling positive regulator (BZR1) family protein Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities. Brassinosteroid signaling positive regulator (BZR1) family protein;(source:Araport11) Ipc04G0014040 AT3G50740.1 UDP-glucosyl transferase 72E1 UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism. UDP-glucosyl transferase 72E1;(source:Araport11) Ipc04G0014030 AT1G80950.1 Phospholipid/glycerol acyltransferase family protein Encodes an acyl-CoA: lysophosphatidylethanolamine acyltransferase with 16:0-CoA being the best acyl donor. Mutations adversely affect the growth of plants and result in decreased lipid content in roots and seeds. Phospholipid/glycerol acyltransferase family protein;(source:Araport11) Ipc04G0014020 AT1G47740.3 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc04G0014010 AT1G75100.1 J-domain protein required for chloroplast accumulation response 1 Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known. J-domain protein required for chloroplast accumulation response 1;(source:Araport11) Ipc04G0014000 AT5G35730.1 EXS (ERD1/XPR1/SYG1) family protein 0 EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11) Ipc04G0013990 AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 4 APO RNA-binding protein (DUF794);(source:Araport11) Ipc04G0013980 AT1G19360.2 0 Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells. Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc04G0013970 AT4G16580.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0013960 AT1G75130.1 cytochrome P450, family 721, subfamily A, polypeptide 1 member of CYP721A cytochrome P450, family 721, subfamily A, polypeptide 1;(source:Araport11) Ipc04G0013950 AT4G02670.2 0 0 indeterminate(ID)-domain 12;(source:Araport11) Ipc04G0013940 AT5G42970.1 Proteasome component (PCI) domain protein encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis. Proteasome component (PCI) domain protein;(source:Araport11) Ipc04G0013930 AT1G75140.1 0 0 membrane protein;(source:Araport11) Ipc04G0013920 AT3G01328.1 ECA1-like gametogenesis related family protein Encodes a ECA1 gametogenesis related family protein ECA1-like gametogenesis related family protein;(source:Araport11) Ipc04G0013910 AT3G56870.2 0 0 hypothetical protein;(source:Araport11) Ipc04G0013900 AT1G75160.1 Protein of unknown function (DUF620) 0 DUF620 family protein (DUF620);(source:Araport11) Ipc04G0013890 AT3G46940.1 DUTP-PYROPHOSPHATASE-LIKE 1 0 DUTP-PYROPHOSPHATASE-LIKE 1;(source:Araport11) Ipc04G0013880 AT3G20395.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0013870 AT4G34480.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc04G0013860 AT5G42710.3 0 0 hypothetical protein;(source:Araport11) Ipc04G0013850 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc04G0013840 #N/A #N/A #N/A #N/A Ipc04G0013830 AT1G47330.1 CBS domain-containing protein with a domain of unknown function (DUF21) 0 methyltransferase, putative (DUF21);(source:Araport11) Ipc04G0013820 AT4G39250.1 RAD-like 1 0 RAD-like 1;(source:Araport11) Ipc04G0013810 AT5G42770.3 0 0 Maf-like protein;(source:Araport11) Ipc04G0013800 AT5G63380.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc04G0013790 AT1G75240.1 homeobox protein 33 Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660). homeobox protein 33;(source:Araport11) Ipc04G0013780 AT2G39060.1 Nodulin MtN3 family protein Encodes a sucrose transporter that is expressed in nectaries and is involved in nectar secretion. Nodulin MtN3 family protein;(source:Araport11) Ipc04G0013770 AT1G75250.2 RAD-like 6 0 RAD-like 6;(source:Araport11) Ipc04G0013760 AT4G35985.3 0 0 Senescence/dehydration-associated protein-like protein;(source:Araport11) Ipc04G0013750 AT1G47270.3 0 Member of TLP family of tubby like proteins that also contain an F-Box. Localized to the plasma membrane. tubby like protein 6;(source:Araport11) Ipc04G0013740 AT4G39230.1 NmrA-like negative transcriptional regulator family protein encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol. NmrA-like negative transcriptional regulator family protein;(source:Araport11) Ipc04G0013730 AT1G47260.1 gamma carbonic anhydrase 2 Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex. gamma carbonic anhydrase 2;(source:Araport11) Ipc04G0013720 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc04G0013710 AT1G19630.1 cytochrome P450, family 722, subfamily A, polypeptide 1 0 cytochrome P450, family 722, subfamily A, polypeptide 1;(source:Araport11) Ipc04G0013700 AT5G42810.1 inositol-pentakisphosphate 2-kinase 1 Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. Is also required for growth and modulates phosphate homeostasis at the transcriptional level. inositol-pentakisphosphate 2-kinase 1;(source:Araport11) Ipc04G0013690 AT4G39170.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc04G0013680 AT1G19660.2 Wound-responsive family protein 0 Wound-responsive family protein;(source:Araport11) Ipc04G0013670 AT1G27660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0013660 AT5G45190.1 Cyclin family protein Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV). Cyclin family protein;(source:Araport11) Ipc04G0013650 AT1G10210.3 0 Encodes ATMPK1. mitogen-activated protein kinase 1;(source:Araport11) Ipc04G0013640 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc04G0013630 AT1G75430.1 BEL1-like homeodomain 11 0 BEL1-like homeodomain 11;(source:Araport11) Ipc04G0013620 AT2G16400.1 BEL1-like homeodomain 7 0 BEL1-like homeodomain 7;(source:Araport11) Ipc04G0013610 AT1G45110.1 Tetrapyrrole (Corrin/Porphyrin) Methylases 0 Tetrapyrrole (Corrin/Porphyrin) Methylase;(source:Araport11) Ipc04G0013600 AT5G42990.1 ubiquitin-conjugating enzyme 18 0 ubiquitin-conjugating enzyme 18;(source:Araport11) Ipc04G0013590 AT3G51030.1 thioredoxin H-type 1 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. thioredoxin H-type 1;(source:Araport11) Ipc04G0013580 AT1G75460.1 ATP-dependent protease La (LON) domain protein 0 ATP-dependent protease La (LON) domain protein;(source:Araport11) Ipc04G0013570 AT5G01180.3 0 Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane. peptide transporter 5;(source:Araport11) Ipc04G0013560 AT1G75500.2 Walls Are Thin 1 An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3) and the nodulin MtN21-like transporter family. Walls Are Thin 1;(source:Araport11) Ipc04G0013550 AT1G75510.1 Transcription initiation factor IIF, beta subunit 0 Transcription initiation factor IIF, beta subunit;(source:Araport11) Ipc04G0013540 AT4G39090.1 Papain family cysteine protease Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R–mediated resistance response. Papain family cysteine protease;(source:Araport11) Ipc04G0013530 AT1G75520.1 SHI-related sequence 5 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.SRS5 is a positive regulator of photomorphogenesis. SHI-related sequence 5;(source:Araport11) Ipc04G0013520 AT1G62020.1 Coatomer, alpha subunit 0 Coatomer, alpha subunit;(source:Araport11) Ipc04G0013510 AT1G75540.1 salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile. salt tolerance homolog2;(source:Araport11) Ipc04G0013500 AT4G34660.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc04G0013490 AT1G05150.1 Calcium-binding tetratricopeptide family protein 0 Calcium-binding tetratricopeptide family protein;(source:Araport11) Ipc04G0013480 AT5G42480.1 Chaperone DnaJ-domain superfamily protein Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0013470 AT1G19910.1 ATPase, F0/V0 complex, subunit C protein vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc04G0013460 AT4G16310.5 0 0 LSD1-like 3;(source:Araport11) Ipc04G0013450 AT4G29860.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc04G0013440 AT5G42520.1 basic pentacysteine 6 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 6;(source:Araport11) Ipc04G0013430 AT5G39600.1 0 0 39S ribosomal protein;(source:Araport11) Ipc04G0013420 AT3G27230.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0013410 AT1G19850.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein;(source:Araport11) Ipc04G0013400 AT1G75670.2 DNA-directed RNA polymerases 0 DNA-directed RNA polymerase;(source:Araport11) Ipc04G0013390 AT1G75590.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc15G0014910 AT5G03180.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0014900 AT4G20520.1 RNA binding;RNA-directed DNA polymerases 0 RNA binding / RNA-directed DNA polymerase;(source:Araport11) Ipc15G0014890 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc15G0014880 AT2G25800.1 Protein of unknown function (DUF810) 0 elongation factor Ts (DUF810);(source:Araport11) Ipc15G0014870 AT3G19430.2 0 0 late embryogenesis abundant protein-related / LEA protein-like protein;(source:Araport11) Ipc15G0014860 AT5G11580.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc15G0014850 AT5G11630.2 0 The mutant is insensitive to oxylipin 9-HOT treatment. Involved in plant defense. hypothetical protein;(source:Araport11) Ipc15G0014840 AT4G32890.1 GATA transcription factor 9 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 9;(source:Araport11) Ipc15G0014830 AT5G11640.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc15G0014820 AT4G09930.1 Avirulence induced gene (AIG1) family protein 0 Avirulence induced gene (AIG1) family protein;(source:Araport11) Ipc15G0014810 AT1G10790.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0014800 #N/A #N/A #N/A #N/A Ipc15G0014790 AT1G52150.1 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc15G0014780 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc15G0014770 AT2G25790.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc15G0014760 AT5G25880.1 NADP-malic enzyme 3 The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. NADP-malic enzyme 3;(source:Araport11) Ipc15G0014750 AT3G18380.1 sequence-specific DNA binding transcription factors;sequence-specific DNA binding 0 DNA-BINDING TRANSCRIPTION FACTOR 2;(source:Araport11) Ipc15G0014740 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0014730 AT2G25760.1 Protein kinase family protein Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Protein kinase family protein;(source:Araport11) Ipc15G0014720 AT3G04770.2 40s ribosomal protein SA B 0 40s ribosomal protein SA B;(source:Araport11) Ipc15G0014710 AT2G25850.4 poly(A) polymerase 2 Encodes a poly(A) polymerase. Located in the nucleus. poly(A) polymerase 2;(source:Araport11) Ipc15G0014700 AT1G45180.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0014690 #N/A #N/A #N/A #N/A Ipc15G0014680 AT4G32830.1 ataurora1 Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. It specifically phosphorylates Ser10 of histone H3 and colocalizes with phosphorylated histone H3 during mitosis. ataurora1;(source:Araport11) Ipc15G0014670 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc15G0014660 AT4G32915.1 0 0 glutamyl-tRNA(Gln) amidotransferase subunit C;(source:Araport11) Ipc15G0014650 AT3G53920.1 RNApolymerase sigma-subunit C Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids. RNApolymerase sigma-subunit C;(source:Araport11) Ipc15G0014640 AT2G44040.1 Dihydrodipicolinate reductase, bacterial/plant 0 Dihydrodipicolinate reductase, bacterial/plant;(source:Araport11) Ipc05G0007200 AT3G57870.1 sumo conjugation enzyme 1 Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name. sumo conjugation enzyme 1;(source:Araport11) Ipc05G0007210 AT5G67200.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc05G0007220 AT5G67210.1 Protein of unknown function (DUF579) Encode a DUF579 (domain of unknown function 579) containing protein essential for normal xylan synthesis and deposition in the secondary cell wall. IRREGULAR XYLEM protein (DUF579);(source:Araport11) Ipc05G0007230 AT3G50210.4 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc05G0007240 AT3G19320.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc05G0007250 AT5G67220.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) Ipc05G0007260 AT1G15810.1 S15/NS1, RNA-binding protein 0 S15/NS1, RNA-binding protein;(source:Araport11) Ipc05G0007270 AT3G24255.3 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc05G0007280 AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc05G0007290 AT5G67230.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc05G0007300 AT1G55630.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc05G0007310 AT5G52290.1 shortage in chiasmata 1 Encodes a protein with similarity to XPF endonucleases. Loss of function mutations have defects in meiosis- specifically a reduction in the number of chiasmata. As a result both pollen and embryo sacs are abnormal and plants have severely reduced fertility. shortage in chiasmata 1;(source:Araport11) Ipc05G0007320 AT3G50120.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc05G0007330 AT5G67240.2 small RNA degrading nuclease 3 0 small RNA degrading nuclease 3;(source:Araport11) Ipc05G0007340 AT4G31615.1 Transcriptional factor B3 family protein 0 Transcriptional factor B3 family protein;(source:Araport11) Ipc05G0007350 AT1G47056.1 VIER F-box proteine 1 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. VIER F-box protein 1;(source:Araport11) Ipc05G0007360 AT1G32010.1 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc05G0007370 AT2G22530.1 Alkaline-phosphatase-like family protein 0 Alkaline-phosphatase-like family protein;(source:Araport11) Ipc05G0007380 AT5G67260.1 CYCLIN D3;2 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs and mediating cytokinin effects in apical growth and development. With PPD and NINJA, it plays a crucial role in leaf morphogenesis. CYCLIN D3;(source:Araport11) Ipc05G0007390 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc05G0007400 AT5G67265.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0007410 AT5G67270.1 end binding protein 1C encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. end binding protein 1C;(source:Araport11) Ipc05G0007420 AT4G37270.1 heavy metal atpase 1 Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions. heavy metal atpase 1;(source:Araport11) Ipc05G0007430 AT5G67330.1 natural resistance associated macrophage protein 4 Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. The mRNA is cell-to-cell mobile. natural resistance associated macrophage protein 4;(source:Araport11) Ipc05G0007440 AT5G43120.1 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein 0 ARM-repeat/Tetratricopeptide repeat (TPR)-like protein;(source:Araport11) Ipc05G0007450 AT4G37460.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms. Involved in mediating effector-triggered immunity. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0007460 AT4G24230.6 acyl-CoA-binding domain 3 acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. Microarray data shows up-regulation of many biotic- and abiotic-stress-related genes in an ACBP3 OE-1 in comparison to wild type. acyl-CoA-binding domain 3;(source:Araport11) Ipc09G0013340 AT1G23460.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc09G0013330 AT1G23440.3 0 0 Peptidase C15, pyroglutamyl peptidase I-like protein;(source:Araport11) Ipc09G0013320 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0013310 AT4G04890.2 0 Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 2;(source:Araport11) Ipc09G0013300 AT1G10670.4 ATP-citrate lyase A-1 One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress. ATP-citrate lyase A-1;(source:Araport11) Ipc09G0013290 AT1G23390.1 Kelch repeat-containing F-box family protein A kelch domain-containing F-box protein. Its N terminus contains a typical F-box motif but its C-terminal domain only consists of one predicted kelch motif. Predicted to be stu Interacts with chalcone synthase CHS to mediate CHS ubiquitination and degradation. Kelch repeat-containing F-box family protein;(source:Araport11) Ipc09G0013280 AT1G60800.1 NSP-interacting kinase 3 Encodes one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis. NSP-interacting kinase 3;(source:Araport11) Ipc09G0013270 AT1G74470.1 Pyridine nucleotide-disulphide oxidoreductase family protein Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. The mRNA is cell-to-cell mobile. Pyridine nucleotide-disulfide oxidoreductase family protein;(source:Araport11) Ipc09G0013260 AT1G60790.1 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). trichome birefringence-like protein (DUF828);(source:Araport11) Ipc09G0013250 AT1G23380.1 KNOTTED1-like homeobox gene 6 homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. homeobox protein knotted-1-like 6;(source:Araport11) Ipc09G0013240 AT5G50200.3 nitrate transmembrane transporters Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction. nitrate transmembrane transporter;(source:Araport11) Ipc09G0013230 AT3G26400.1 eukaryotic translation initiation factor 4B1 member of eIF4B - eukaryotic initiation factor 4B The mRNA is cell-to-cell mobile. eukaryotic translation initiation factor 4B1;(source:Araport11) Ipc09G0013220 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc09G0013210 AT1G67850.4 0 0 lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11) Ipc09G0013200 AT2G05645.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0013190 AT1G57750.2 cytochrome P450, family 96, subfamily A, polypeptide 15 Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis. cytochrome P450, family 96, subfamily A, polypeptide 15;(source:Araport11) Ipc09G0013180 AT5G04320.1 Shugoshin C terminus Encodes a protein that protects meiotic centromere cohesion. Shugoshin C terminus;(source:Araport11) Ipc09G0013170 AT1G12990.1 beta-1,4-N-acetylglucosaminyltransferase family protein 0 beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc09G0013160 AT1G24590.1 DORNROSCHEN-like Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1. DORNROSCHEN-like protein;(source:Araport11) Ipc09G0013150 AT1G24590.1 DORNROSCHEN-like Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1. DORNROSCHEN-like protein;(source:Araport11) Ipc09G0013140 AT3G26510.6 0 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc09G0013130 AT3G26570.2 phosphate transporter 2;1 low affinity phosphate transporter phosphate transporter 2;(source:Araport11) Ipc09G0013120 AT1G70630.7 0 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc09G0013110 AT1G70620.3 cyclin-related 0 cyclin-like protein;(source:Araport11) Ipc09G0013100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0013090 AT1G70610.1 transporter associated with antigen processing protein 1 member of TAP subfamily transporter associated with antigen processing protein 1;(source:Araport11) Ipc09G0013080 AT2G42490.1 Copper amine oxidase family protein Peroxisome-localized copper amine oxidase involved in lateral root formation. Copper amine oxidase family protein;(source:Araport11) Ipc09G0013070 AT1G70590.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc09G0013060 AT1G70570.1 anthranilate phosphoribosyltransferase, putative 0 anthranilate phosphoribosyltransferase;(source:Araport11) Ipc09G0013050 AT1G10710.2 poor homologous synapsis 1 Computational predictions suggested the presence of a small cysteine-rich protein downstream of this gene model (Silverstein 2007), but subsequent analysis revealed that this region contains a tenth exon for the At1g10710 gene which is depicted in the At1g10710.1 gene model. poor homologous synapsis 1;(source:Araport11) Ipc09G0013040 AT1G51940.1 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity.It is required for the suppression of defense responses in absence of pathogen infection or upon abscisic acid treatment. Loss-of-function mutants display enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum. Its expression is repressed by pathogen infection and biological elicitors and is induced abscisic acid.Expression is strongly repressed by elicitors and fungal infection, and is induced by the hormone abscisic acid (ABA). Insertional mutants show increased expression of PHYTOALEXIN-DEFICIENT 3 (PAD3), enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum infection and reduced physiological responses to ABA, suggesting that LYK3 is important for the cross-talk between signaling pathways activated by ABA and pathogens (PMID:24639336). protein kinase family protein / peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc09G0013030 AT1G12940.1 nitrate transporter2.5 member of High affinity nitrate transporter family nitrate transporter2.5;(source:Araport11) Ipc09G0013020 AT1G14470.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc09G0013010 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0013000 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc09G0012990 AT1G10760.3 0 Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein;(source:Araport11) Ipc01G0013770 AT4G02670.1 indeterminate(ID)-domain 12 0 indeterminate(ID)-domain 12;(source:Araport11) Ipc01G0013760 AT3G22830.1 heat shock transcription factor A6B member of Heat Stress Transcription Factor (Hsf) family heat shock transcription factor A6B;(source:Araport11) Ipc01G0013750 AT3G63340.5 0 0 kinase superfamily protein;(source:Araport11) Ipc01G0013740 AT3G63340.12 0 0 kinase superfamily protein;(source:Araport11) Ipc01G0013730 AT4G14720.1 TIFY domain/Divergent CCT motif family protein PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. TIFY domain/Divergent CCT motif family protein;(source:Araport11) Ipc01G0013720 AT1G03070.3 0 0 Bax inhibitor-1 family protein;(source:Araport11) Ipc01G0013710 AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc01G0013700 AT3G04810.3 0 Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. NIMA-related kinase 2;(source:Araport11) Ipc01G0013690 AT1G03080.3 0 0 kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc01G0013680 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) Ipc01G0013670 AT4G35490.2 0 0 mitochondrial ribosomal protein L11;(source:Araport11) Ipc01G0013660 AT5G65040.1 Protein of unknown function (DUF581) 0 senescence-associated family protein (DUF581);(source:Araport11) Ipc01G0013650 AT2G31580.5 0 ICA1 is a nuclear localized member of the tRNA(His) guanylyl transferase superfamily. Loss of function alleles show increased sensitivity to growth at high temperatures defects in cell cycle progression and DNA repair. tRNAHis guanylyltransferase;(source:Araport11) Ipc01G0013640 AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc01G0013630 AT3G06480.1 DEAD box RNA helicase family protein 0 DEAD box RNA helicase family protein;(source:Araport11) Ipc01G0013620 AT3G63220.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0013610 AT1G03110.1 Transducin/WD40 repeat-like superfamily protein Encodes a gene involved in the modification of nucleosides in tRNA. Mutants have no 7-methylguanosine. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0013600 AT4G14830.1 0 0 17.6 kDa class II heat shock protein;(source:Araport11) Ipc01G0013590 AT3G22500.1 Seed maturation protein late embryogenesis abundant (LEA) protein Seed maturation protein;(source:Araport11) Ipc01G0013580 AT2G32100.1 ovate family protein 16 0 ovate family protein 16;(source:Araport11) Ipc01G0013570 AT5G28060.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc01G0013560 AT5G40940.1 putative fasciclin-like arabinogalactan protein 20 0 putative fasciclin-like arabinogalactan protein 20;(source:Araport11) Ipc01G0013550 AT1G03150.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc01G0013540 AT4G02780.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein Catalyzes the conversion of geranylgeranyl pyrophosphate (GGPP) to copalyl pyrophosphate (CPP) of gibberellin biosynthesis Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc01G0013530 AT3G63120.2 0 0 cyclin p1;(source:Araport11) Ipc01G0013520 AT4G02800.1 0 0 GRIP/coiled-coil protein;(source:Araport11) Ipc01G0013510 AT3G23600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0013500 AT4G02900.4 0 0 ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc01G0013490 AT3G03080.1 Zinc-binding dehydrogenase family protein 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc01G0013480 AT3G63070.1 Tudor/PWWP/MBT domain-containing protein HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions. The mRNA is cell-to-cell mobile. Tudor/PWWP/MBT domain-containing protein;(source:Araport11) Ipc01G0013470 AT2G48150.1 glutathione peroxidase 4 Encodes glutathione peroxidase. glutathione peroxidase 4;(source:Araport11) Ipc01G0013460 AT3G63110.1 isopentenyltransferase 3 Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast. isopentenyltransferase 3;(source:Araport11) Ipc01G0013450 AT1G03220.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0013440 AT4G02840.1 Small nuclear ribonucleoprotein family protein SmD1b is one of two Yeast SmD1 orthologs, the other being SmD1a.SmD1b accumulates to higher levels than SmD1a.It is localized to the nucleolus and nuclear speckles and appears to have a role in RNA splicing and indirectly facilitating PTGS. Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc01G0013430 AT1G09570.6 0 Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation. phytochrome A;(source:Araport11) Ipc01G0013420 AT3G23600.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0013410 AT3G06190.1 BTB-POZ and MATH domain 2 Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6). BTB-POZ and MATH domain 2;(source:Araport11) Ipc01G0013400 AT4G02920.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0013390 AT4G02930.1 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) Ipc01G0013380 AT1G63900.1 E3 Ubiquitin ligase family protein Encodes a RING-type ubiquitin E3 ligase of the chloroplast outer membrane that associates with TOC complexes and mediates ubiquitination of TOC components, promoting their degradation. It not only regulates chloroplast protein import but also targets components of the peroxisome protein import apparatus, PEX13 in particular. Several studies have been done to examine the peroxisomal localization of this protein, with varying interpretations. E3 Ubiquitin ligase family protein;(source:Araport11) Ipc01G0013370 AT2G15980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0013360 AT4G02940.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein ALKBH10B is a functional RNA N6-methyladenosine demethylase. Reduction in ALKBH10B decreases m6A levels, and affects the stability of flowering time genes including FT, SPL3 and SPL9. Mutant plants are early flowering. oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) Ipc01G0013350 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc01G0013340 AT3G06260.1 galacturonosyltransferase-like 4 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 4;(source:Araport11) Ipc01G0013330 AT1G03360.1 ribosomal RNA processing 4 Encodes a core subunit of the RNA exosome required for the processing of rRNA, several snoRNA and the degradation of aberrant transcripts. ribosomal RNA processing 4;(source:Araport11) Ipc01G0013320 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0013310 AT4G26450.2 0 0 hypothetical protein;(source:Araport11) Ipc01G0013300 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0013290 AT5G35960.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc01G0013280 AT1G03430.1 histidine-containing phosphotransfer factor 5 Encodes AHP5, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). histidine-containing phosphotransfer factor 5;(source:Araport11) Ipc01G0013270 AT1G03440.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc01G0013260 AT3G63010.1 alpha/beta-Hydrolases superfamily protein Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0013250 AT1G54690.1 gamma histone variant H2AX Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. gamma histone variant H2AX;(source:Araport11) Ipc01G0013240 AT4G03110.1 RNA-binding protein-defense related 1 Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity. RNA-binding protein-defense related 1;(source:Araport11) Ipc01G0013230 AT4G03130.2 0 0 BRCT domain-containing DNA repair protein;(source:Araport11) Ipc01G0013220 AT1G57790.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0013210 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc01G0013200 AT4G03150.1 0 0 plant/protein;(source:Araport11) Ipc01G0013190 AT3G62980.1 F-box/RNI-like superfamily protein Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis. F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0013180 AT2G47890.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc01G0013170 AT3G62970.1 zinc finger (C3HC4-type RING finger) family protein 0 zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc01G0013160 AT2G21040.1 Calcium-dependent lipid-binding (CaLB domain) family protein C2 domain-containing protein. Possible pseudogene of AT2G20990. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc01G0013150 AT3G62950.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc01G0013140 AT3G62930.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc01G0013130 AT4G09350.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0013120 AT1G03010.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc01G0013110 AT1G58242.1 Plant thionin family protein 0 Plant thionin family protein;(source:Araport11) Ipc01G0013100 AT2G47850.3 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc01G0013090 AT3G62910.1 Peptide chain release factor 1 Encodes a plastid-localized ribosome release factor 1 that is essential in chloroplast development. Pale green, albino mutant seedlings arrest early in seedling development. Peptide chain release factor 1;(source:Araport11) Ipc01G0013080 AT3G62900.3 0 0 CW-type Zinc Finger;(source:Araport11) Ipc01G0013070 AT4G02560.2 Homeodomain-like superfamily protein Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants. LD has been reported to exhibit prion like behavior in yeast but it remains to be determined if such activity exists during normal plant development. Homeodomain-like superfamily protein;(source:Araport11) Ipc01G0013060 AT2G47830.1 Cation efflux family protein 0 Cation efflux family protein;(source:Araport11) Ipc01G0013050 AT2G47820.2 0 0 arginine-glutamic acid dipeptide repeat protein;(source:Araport11) Ipc01G0013040 AT1G14850.1 nucleoporin 155 Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport nucleoporin 155;(source:Araport11) Ipc01G0013030 AT2G47730.2 0 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase phi 8;(source:Araport11) Ipc01G0013020 AT1G02920.1 glutathione S-transferase 7 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase 7;(source:Araport11) Ipc01G0013010 AT3G12290.1 Amino acid dehydrogenase family protein MTHFD1 encodes a cytoplasmic bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase that is involved in one carbon metabolism and control of DNA methylation. Amino acid dehydrogenase family protein;(source:Araport11) Ipc01G0013000 AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein Mutants defective in this gene were shown to have a reduced PSII content (overall reduction in the levels of several PSII subunits) and a disrupted grana stack structure. The N-terminal half of the protein contains two tetratricopeptide repeat (TPR) motifs that are arranged tandemly, each consisting of a 34-residue degenerate consensus sequence. The N-terminal sequence is rich in positive and hydroxylated amino acid residues. tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc01G0012990 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc01G0012980 AT2G47760.5 0 Encodes an α-1,3-mannosyltransferase. Plants with mutations in the ALG3 protein have abnormal gylcoslation profiles. They also exhibit abnormal responses to MAMPs possibly because the glycan properties of FL22 are affected. asparagine-linked glycosylation 3;(source:Araport11) Ipc01G0012970 AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway. TSPO(outer membrane tryptophan-rich sensory protein)-like protein;(source:Araport11) Ipc01G0012960 AT4G02485.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc01G0012950 AT1G02880.3 thiamin pyrophosphokinase1 Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1;(source:Araport11) Ipc01G0012940 AT4G02460.1 DNA mismatch repair protein, putative Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. DNA mismatch repair protein;(source:Araport11) Ipc01G0012930 AT2G47790.1 Transducin/WD40 repeat-like superfamily protein Encodes GIGANTUS1 (GTS1), a member of Transducin/WD40 protein superfamily. Controls seed germination, growth and biomass accumulation. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0012920 AT4G02450.2 HSP20-like chaperones superfamily protein Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0012910 AT2G47800.1 multidrug resistance-associated protein 4 Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. The mRNA is cell-to-cell mobile. multidrug resistance-associated protein 4;(source:Araport11) Ipc01G0012900 AT1G02870.1 0 0 nucleolar-like protein;(source:Araport11) Ipc01G0012890 AT3G62840.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc01G0012880 AT2G47650.1 UDP-xylose synthase 4 encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-xylose synthase 4;(source:Araport11) Ipc01G0012870 AT3G62830.2 NAD(P)-binding Rossmann-fold superfamily protein encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0012860 AT5G61770.3 PETER PAN-like protein A single-copy gene encoding a 346 aa protein with a single Brix domain. Similar to yeast ribosome biogenesis proteins Ssf1/2. PETER PAN-like protein;(source:Araport11) Ipc01G0012850 AT3G62790.1 NADH-ubiquinone oxidoreductase-related 0 NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc01G0012840 AT3G62860.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0012830 AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0012820 AT2G47600.1 magnesium/proton exchanger Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family magnesium/proton exchanger;(source:Araport11) Ipc01G0012810 AT2G47590.1 photolyase/blue-light receptor 2 photolyase/blue light photoreceptor PHR2 (PHR2) mRNA, photolyase/blue-light receptor 2;(source:Araport11) Ipc01G0012800 AT4G02405.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc01G0012790 AT1G02816.1 Protein of unknown function, DUF538 0 pectinesterase (Protein of unknown function, DUF538);(source:Araport11) Ipc01G0012780 AT1G13200.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc01G0012770 AT5G41630.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0012760 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0012750 AT5G46930.1 Plant invertase/pectin methylesterase inhibitor superfamily protein 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc01G0012740 AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0012730 AT4G02290.1 glycosyl hydrolase 9B13 0 glycosyl hydrolase 9B13;(source:Araport11) Ipc01G0012720 AT4G02280.1 sucrose synthase 3 Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering. sucrose synthase 3;(source:Araport11) Ipc01G0012710 AT1G02790.1 polygalacturonase 4 encodes a exopolygalacturonase. polygalacturonase 4;(source:Araport11) Ipc01G0012700 AT4G02260.2 RELA/SPOT homolog 1 Displays guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity but not guanosine-3',5'-bis(diphosphate) 3'-diphosphate synthase activity. RELA/SPOT homolog 1;(source:Araport11) Ipc01G0012690 AT3G16770.1 ethylene-responsive element binding protein Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3. The mRNA is cell-to-cell mobile. ethylene-responsive element binding protein;(source:Araport11) Ipc01G0012680 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc01G0012670 AT2G40940.1 ethylene response sensor 1 Ethylene receptor, subfamily 1. Has histidine kinase activity. ethylene response sensor 1;(source:Araport11) Ipc01G0012660 AT3G16850.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0012650 AT1G56300.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0012640 AT2G47500.1 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc01G0012630 AT2G47490.1 NAD+ transporter 1 Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro. NAD+ transporter 1;(source:Araport11) Ipc01G0012620 AT5G49220.1 Protein of unknown function (DUF789) 0 hypothetical protein (DUF789);(source:Araport11) Ipc01G0012610 AT5G49230.2 0 Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction. Drought-responsive family protein;(source:Araport11) Ipc01G0012600 AT5G26980.3 0 member of SYP4 Gene Family syntaxin of plants 41;(source:Araport11) Ipc01G0012590 AT4G16120.1 COBRA-like protein-7 precursor putative membrane-anchored cell wall protein COBRA-like protein-7 precursor;(source:Araport11) Ipc01G0012580 AT4G36560.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0012570 AT3G62660.1 galacturonosyltransferase-like 7 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 7;(source:Araport11) Ipc01G0012560 AT2G47485.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0012550 AT1G02700.1 0 0 GATA transcription factor-like protein;(source:Araport11) Ipc01G0012540 AT5G49300.1 GATA transcription factor 16 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 16;(source:Araport11) Ipc01G0012530 AT3G06720.2 importin alpha isoform 1 Encodes importin alpha involved in nuclear import. importin alpha isoform 1;(source:Araport11) Ipc01G0012520 AT5G47900.9 0 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc01G0012510 AT2G47480.1 Protein of unknown function (DUF3511) 0 DUF3511 domain protein, putative (DUF3511);(source:Araport11) Ipc01G0012500 AT4G02160.1 0 0 cotton fiber protein;(source:Araport11) Ipc01G0012490 AT2G25920.1 0 0 pollen-specific LRR extensin-like protein;(source:Araport11) Ipc01G0012480 AT3G62620.9 0 Encodes a protein of unknown function. Previously this protein has been annotated computationally as a sucrose-phosphatase-related protein. However, the source of this annotation can not be verified. This annotation (sucrose-phosphatase-related) has been removed. sucrose-phosphatase-like protein;(source:Araport11) Ipc01G0012470 AT1G02660.1 alpha/beta-Hydrolases superfamily protein PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0012460 AT4G02110.2 0 0 transcription coactivator;(source:Araport11) Ipc01G0012450 AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat 0 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein;(source:Araport11) Ipc01G0012440 AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc01G0012430 AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc01G0012420 AT3G62390.1 TRICHOME BIREFRINGENCE-LIKE 6 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 6;(source:Araport11) Ipc01G0012410 AT2G01570.1 GRAS family transcription factor family protein Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development. GRAS family transcription factor family protein;(source:Araport11) Ipc01G0012400 AT1G02570.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0012390 AT3G58710.2 WRKY DNA-binding protein 69 member of WRKY Transcription Factor; Group II-e WRKY DNA-binding protein 69;(source:Araport11) Ipc01G0012380 AT4G02010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0012370 AT5G11560.1 catalytics 0 catalytics;(source:Araport11) Ipc01G0012360 AT3G62360.2 0 0 Carbohydrate-binding-like fold;(source:Araport11) Ipc01G0012350 AT3G62310.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc01G0012340 AT2G47240.3 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc01G0012330 AT1G09320.1 agenet domain-containing protein Heterochromatin-binding protein which can bind to three H3K9me2 tails. Preferentially binds to long TEs. Required for transcriptional silencing, non-CG DNA methylation, and H3K9 dimethylation at some loci. agenet domain-containing protein;(source:Araport11) Ipc01G0012320 AT2G47220.1 DOMAIN OF UNKNOWN FUNCTION 724 5 Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype polyribonucleotide phosphorylase, putative (DOMAIN OF UNKNOWN FUNCTION 724 5);(source:Araport11) Ipc01G0012310 AT4G01940.1 NFU domain protein 1 Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast. NFU domain protein 1;(source:Araport11) Ipc01G0012300 AT4G01935.1 0 0 insulin-induced protein;(source:Araport11) Ipc01G0012290 AT1G02460.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc01G0012280 AT2G47160.1 HCO3- transporter family Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation. HCO3- transporter family;(source:Araport11) Ipc01G0012270 AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein 0 Ribosomal protein S27a / Ubiquitin family protein;(source:Araport11) Ipc01G0012260 AT2G47140.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0012250 AT3G06530.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc01G0012240 AT1G02475.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc01G0012230 AT3G62260.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc01G0012220 AT3G62240.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0012210 AT3G15580.1 Ubiquitin-like superfamily protein Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Ubiquitin-like superfamily protein;(source:Araport11) Ipc01G0012200 AT1G68540.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0012190 AT3G60030.1 squamosa promoter-binding protein-like 12 0 squamosa promoter-binding protein-like 12;(source:Araport11) Ipc01G0012180 AT3G62220.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0012170 AT3G17430.2 0 Nucleotide/sugar transporter family proteinThe mRNA is cell-to-cell mobile. Nucleotide-sugar transporter family protein;(source:Araport11) Ipc01G0012160 AT3G62190.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0012150 AT2G47030.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc01G0012140 AT2G47020.1 Peptide chain release factor 1 0 Peptide chain release factor 1;(source:Araport11) Ipc01G0012130 AT2G47010.2 0 0 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase;(source:Araport11) Ipc01G0012120 AT2G47000.6 0 Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation. ATP binding cassette subfamily B4;(source:Araport11) Ipc01G0012110 AT3G62140.1 0 0 NEFA-interacting nuclear protein;(source:Araport11) Ipc01G0012100 AT4G01810.3 0 Sec23 homolog , forms a distinct clade with SEC23D.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation. Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc01G0012090 AT4G01800.1 Albino or Glassy Yellow 1 Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1;(source:Araport11) Ipc01G0012080 AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc01G0012070 AT4G01690.1 Flavin containing amine oxidoreductase family Encodes protoporphyrinogen oxidase (PPOX). Flavin containing amine oxidoreductase family;(source:Araport11) Ipc01G0012060 AT2G46980.2 0 Encodes ASY3, a coiled-coil domain protein that is required for normal meiosis. asynaptic protein;(source:Araport11) Ipc01G0012050 AT3G62080.1 SNF7 family protein Encodes a charged multi-vesicular body protein (CHMP7) homolog, that is an ESCRT-III-related protein and functions in the endosomal sorting pathway in humans. The Brassica homolog has been shown to be involved in plant growth and leaf senescence. SNF7 family protein;(source:Araport11) Ipc01G0012040 AT4G01650.1 Polyketide cyclase / dehydrase and lipid transport protein 0 Polyketide cyclase / dehydrase and lipid transport protein;(source:Araport11) Ipc01G0012030 AT1G02330.1 0 Encodes a nuclear coiled-coil domain-containing protein that interacts with and negatively regulates COP1's E3 ubiquitin ligase activity, and represses COP1 mediated HY5 degradation in cell-free extracts. integrator complex subunit-like protein;(source:Araport11) Ipc01G0012020 AT3G62010.1 0 0 metal ion-binding protein;(source:Araport11) Ipc01G0012010 AT5G08415.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc01G0012000 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc05G0000520 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc05G0000530 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0000540 AT1G64370.1 0 0 filaggrin-like protein;(source:Araport11) Ipc11G0007200 #N/A #N/A #N/A #N/A Ipc11G0007190 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0007180 AT5G02740.2 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc12G0007170 AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5;(source:Araport11) Ipc12G0007160 AT1G74160.1 0 Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation. LONGIFOLIA protein;(source:Araport11) Ipc12G0007150 AT3G26850.2 histone-lysine N-methyltransferases 0 histone-lysine N-methyltransferase;(source:Araport11) Ipc12G0007140 AT1G18610.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0007130 AT4G23620.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain 0 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein;(source:Araport11) Ipc12G0007120 AT3G52300.1 ATP synthase D chain, mitochondrial 0 ATP synthase D chain;(source:Araport11) Ipc12G0007110 AT5G63850.1 amino acid permease 4 Amino acid transporter whose expression is downregulated by dehydration. amino acid permease 4;(source:Araport11) Ipc12G0007100 AT3G55330.1 PsbP-like protein 1 0 PsbP-like protein 1;(source:Araport11) Ipc12G0007090 AT5G60960.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes PNM1 (for PPR protein localized to the nucleus and mitochondria 1), a PPR protein that is dual localized to mitochondria and nuclei. Loss of PNM1 function in mitochondria, but not in nuclei, is lethal for the embryo. In mitochondria, it is associated with polysomes and may play a role in translation. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0007080 AT5G60920.1 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family;(source:Araport11) Ipc12G0007070 AT3G08900.1 reversibly glycosylated polypeptide 3 RGP3 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It is a reversibly autoglycosylated protein. Fluorescently-tagged RGP3 is found in the cytosol and associated with Golgi-like particles when expressed in tobacco leaves. An RGP3-YFP fusion protein under the control a native promoter can be found in the endosperm of Arabidopsis embryos during the linear and bent cotyledon stages of development. reversibly glycosylated polypeptide 3;(source:Araport11) Ipc12G0007060 AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11) Ipc12G0007050 AT2G31400.2 0 Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression. s uncoupled 1;(source:Araport11) Ipc12G0007040 AT5G15800.1 K-box region and MADS-box transcription factor family protein Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc12G0007020 #N/A #N/A #N/A #N/A Ipc12G0007030 AT5G51280.1 DEAD-box protein abstrakt, putative 0 DEAD-box protein abstrakt;(source:Araport11) Ipc12G0007010 AT5G60910.1 AGAMOUS-like 8 MADS box gene negatively regulated by APETALA1 AGAMOUS-like 8;(source:Araport11) Ipc12G0007000 AT5G17400.1 endoplasmic reticulum-adenine nucleotide transporter 1 This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels. endoplasmic reticulum-adenine nucleotide transporter 1;(source:Araport11) Ipc12G0006990 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc12G0006980 AT1G18580.1 galacturonosyltransferase 11 Encodes a protein with putative galacturonosyltransferase activity.GAUT11 is required for pectin synthesis in seed coat epidermal cells and normal mucilage release. galacturonosyltransferase 11;(source:Araport11) Ipc12G0006970 AT5G03180.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0006960 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc12G0006950 AT1G74100.1 sulfotransferase 16 encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates. sulfotransferase 16;(source:Araport11) Ipc13G0017750 AT2G29590.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc13G0017760 AT5G58270.1 ABC transporter of the mitochondrion 3 Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis. ABC transporter of the mitochondrion 3;(source:Araport11) Ipc13G0017770 AT1G71720.2 0 Encodes a chloroplast localized protein that regulates the translation of Ycf1 by binding to its mRNA. It is involved in the biogenesis of photosynthetic complexes. Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc13G0017780 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc13G0017790 ATMG00110.1 cytochrome C biogenesis 206 Encodes a mitochondria-encoded cytochrome c biogenesis protein. cytochrome C biogenesis 206;(source:Araport11) Ipc13G0017800 AT3G03560.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017810 AT3G03550.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0017820 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0025640 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0025630 AT1G13540.1 Protein of unknown function (DUF1262) 0 hypothetical protein (DUF1262);(source:Araport11) Ipc04G0006110 AT1G30100.1 nine-cis-epoxycarotenoid dioxygenase 5 Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 5;(source:Araport11) Ipc04G0006100 AT5G46180.1 ornithine-delta-aminotransferase Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. ornithine-delta-aminotransferase;(source:Araport11) Ipc04G0006090 AT5G46190.4 0 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc04G0006080 AT3G05060.1 NOP56-like pre RNA processing ribonucleoprotein SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein NOP56-like pre RNA processing ribonucleoprotein;(source:Araport11) Ipc01G0028130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001690 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0001700 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001710 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0001720 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc04G0001730 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc04G0001740 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0006720 AT3G55340.1 phragmoplastin interacting protein 1 Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation. phragmoplastin interacting protein 1;(source:Araport11) Ipc07G0000960 AT1G48175.4 0 0 Cytidine/deoxycytidylate deaminase family protein;(source:Araport11) Ipc07G0000950 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0000940 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0000930 AT3G42860.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0000920 AT5G05470.1 eukaryotic translation initiation factor 2 alpha subunit Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro. eukaryotic translation initiation factor 2 alpha subunit;(source:Araport11) Ipc07G0000910 AT4G24270.2 EMBRYO DEFECTIVE 140 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 140;(source:Araport11) Ipc08G0003100 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003110 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003080 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0003090 AT3G07820.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc04G0002210 AT4G14290.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0002220 AT5G19010.1 mitogen-activated protein kinase 16 member of MAP Kinase mitogen-activated protein kinase 16;(source:Araport11) Ipc05G0024780 AT2G30290.2 VACUOLAR SORTING RECEPTOR 2 0 VACUOLAR SORTING RECEPTOR 2;(source:Araport11) Ipc05G0024790 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0024800 AT2G38550.1 Transmembrane proteins 14C 0 Transmembrane proteins 14C;(source:Araport11) Ipc05G0024810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0024820 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc05G0024830 AT1G64340.2 0 0 Serine/Threonine-kinase;(source:Araport11) Ipc05G0024840 AT5G41170.3 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc05G0024850 AT4G32010.2 0 0 HSI2-like 1;(source:Araport11) Ipc05G0024860 AT2G25730.4 0 0 zinc finger FYVE domain protein;(source:Araport11) Ipc05G0024870 AT1G14540.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc05G0024880 AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc05G0024890 AT4G03250.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc05G0024900 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc05G0024910 AT2G07020.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc05G0024920 AT2G38540.1 lipid transfer protein 1 Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile. lipid transfer protein 1;(source:Araport11) Ipc05G0024930 #N/A #N/A #N/A #N/A Ipc05G0024770 AT5G10550.1 global transcription factor group E2 This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation. global transcription factor group E2;(source:Araport11) Ipc05G0024760 AT3G56400.1 WRKY DNA-binding protein 70 Member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. WRKY DNA-binding protein 70;(source:Araport11) Ipc05G0024750 AT2G38570.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0000780 AT3G47490.1 HNH endonuclease 0 HNH endonuclease;(source:Araport11) Ipc15G0000770 AT3G47510.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0000760 AT3G47520.1 malate dehydrogenase Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts. The mRNA is cell-to-cell mobile. malate dehydrogenase;(source:Araport11) Ipc15G0000750 AT5G62440.1 Protein of unknown function (DUF3223) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. EMB514 (DUF3223);(source:Araport11) Ipc15G0000740 AT3G47550.6 RING/FYVE/PHD zinc finger superfamily protein 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc15G0000730 AT1G69588.1 CLAVATA3/ESR-RELATED 45 Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini CLAVATA3/ESR-RELATED 45;(source:Araport11) Ipc15G0000720 AT1G74670.1 Gibberellin-regulated family protein 0 Gibberellin-regulated family protein;(source:Araport11) Ipc15G0000710 AT1G74660.2 0 Encodes MINI ZINC FINGER 1 (MIF1) which has a zinc finger domain but lacks other protein motifs normally present in transcription factors. MIF1 physically interact with a group of zinc finger-homeodomain (ZHD) transcription factors, such as ZHD5 (AT1G75240), that regulate floral architecture and leaf development. Gel mobility shift assays revealed that MIF1 blocks the DNA binding activity of ZHD5 homodimers by competitively forming MIF1-ZHD5 heterodimers. Constitutive overexpression of MIF1 caused dramatic developmental defects, seedlings were non-responsive to gibberellin (GA) for cell elongation, hypersensitive to the GA synthesis inhibitor paclobutrazol (PAC) and abscisic acid (ABA), and hyposensitive to auxin, brassinosteroid and cytokinin, but normally responsive to ethylene. mini zinc finger 1;(source:Araport11) Ipc15G0000700 AT1G26880.1 Ribosomal protein L34e superfamily protein 0 Ribosomal protein L34e superfamily protein;(source:Araport11) Ipc15G0000690 AT5G62480.1 glutathione S-transferase tau 9 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase tau 9;(source:Araport11) Ipc15G0000680 AT1G74590.1 glutathione S-transferase TAU 10 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase TAU 10;(source:Araport11) Ipc15G0000670 AT5G62480.1 glutathione S-transferase tau 9 Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase tau 9;(source:Araport11) Ipc15G0000660 AT1G18810.1 phytochrome kinase substrate-related 0 phytochrome kinase substrate-like protein;(source:Araport11) Ipc15G0000650 AT3G47640.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0000640 AT1G74520.2 0 Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible. HVA22 homologue A;(source:Araport11) Ipc15G0000630 AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain 0 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11) Ipc15G0000620 AT3G14300.1 pectinesterase family protein 0 pectinesterase family protein;(source:Araport11) Ipc15G0000610 AT3G47710.1 BANQUO 3 BNQ3 belongs to a family of atypical non-DNA binding basic helix-loop-helix (bHLH) proteins that heterodimerize with and negatively regulate bHLH transcription factors. Directly and negatively regulated by AP3 and PI in petals. Required for appropriate regulation of flowering time.May also have a role in regulating light responses. BANQUO 3;(source:Araport11) Ipc15G0000600 AT2G02800.2 protein kinase 2B Encodes protein kinase APK2b. protein kinase 2B;(source:Araport11) Ipc15G0000590 AT3G47810.3 Calcineurin-like metallo-phosphoesterase superfamily protein Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc15G0000580 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc15G0000570 AT5G56340.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0000560 AT5G62760.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0000550 AT1G74720.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development. C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) Ipc15G0000540 AT5G62740.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family 0 SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11) Ipc15G0000530 AT5G62680.1 Major facilitator superfamily protein Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds. Major facilitator superfamily protein;(source:Araport11) Ipc15G0000520 AT5G62680.1 Major facilitator superfamily protein Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds. Major facilitator superfamily protein;(source:Araport11) Ipc15G0000510 AT3G47950.2 0 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase H[+]-ATPase 4;(source:Araport11) Ipc15G0000500 AT1G74750.4 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc15G0000490 AT3G47890.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc15G0000480 AT5G62640.1 proline-rich family protein nuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC proline-rich family protein;(source:Araport11) Ipc15G0000470 AT1G74790.1 catalytics 0 catalytics;(source:Araport11) Ipc15G0000460 AT1G18950.3 0 0 DDT domain superfamily;(source:Araport11) Ipc15G0000450 AT1G16770.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0000440 AT5G62620.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced seed coat mucilage and accelerated leaf senescence. Galactosyltransferase family protein;(source:Araport11) Ipc15G0000430 AT3G28470.1 Duplicated homeodomain-like superfamily protein Member of the R2R3 factor gene family. Duplicated homeodomain-like superfamily protein;(source:Araport11) Ipc15G0000420 AT5G20110.1 Dynein light chain type 1 family protein 0 Dynein light chain type 1 family protein;(source:Araport11) Ipc15G0000410 AT5G13050.1 5-formyltetrahydrofolate cycloligase 5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate 5-formyltetrahydrofolate cycloligase;(source:Araport11) Ipc15G0000400 AT1G74830.1 Protein of unknown function, DUF593 0 myosin-binding protein, putative (Protein of unknown function, DUF593);(source:Araport11) Ipc15G0000380 AT1G74840.2 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc15G0000390 AT2G20100.3 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0000370 AT1G74850.1 plastid transcriptionally active 2 Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. plastid transcriptionally active 2;(source:Araport11) Ipc15G0000360 AT1G58350.4 0 0 Putative serine esterase family protein;(source:Araport11) Ipc15G0000350 AT1G74860.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0000340 AT5G62580.2 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0000330 AT3G48070.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc15G0000320 AT3G48150.1 anaphase-promoting complex subunit 8 anaphase-promoting complex or cyclosome subunit anaphase-promoting complex subunit 8;(source:Araport11) Ipc15G0000310 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc15G0000300 AT3G48160.2 DP-E2F-like 1 E2F-like protein, an inhibitor of the endocycle, preserves the mitotic state of proliferating cells by suppressing transcription of genes that are required for cells to enter the DNA endoreduplication cycle. DP-E2F-like 1;(source:Araport11) Ipc15G0000290 AT5G49970.1 pyridoxin (pyrodoxamine) 5'-phosphate oxidase encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX. pyridoxin (pyrodoxamine) 5-phosphate oxidase;(source:Araport11) Ipc15G0000280 AT1G74920.1 aldehyde dehydrogenase 10A8 ALDH10A8 encodes a protein that has not been functionally characterized, but it is similar to an Arabidopsis protein that has betaine aldehyde dehydrogenase and aminoaldehyde dehydrogenase activity. ALDH10A8 localizes to leucoplasts. aldh10a8 mutant plants are more susceptible to NaCl and dehydration stress. aldehyde dehydrogenase 10A8;(source:Araport11) Ipc15G0000260 AT5G50110.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc15G0000270 AT3G48180.1 0 0 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase;(source:Araport11) Ipc15G0000250 AT5G59845.1 Gibberellin-regulated family protein Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall. Gibberellin-regulated family protein;(source:Araport11) Ipc15G0000240 AT5G65200.1 plant U-box 38 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 38;(source:Araport11) Ipc15G0000230 AT5G62570.1 Calmodulin binding protein-like 0 Calmodulin binding protein-like protein;(source:Araport11) Ipc15G0000220 AT1G60010.1 0 0 D-ribose-binding periplasmic protein;(source:Araport11) Ipc15G0000210 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc15G0000200 AT3G01430.1 0 0 NHL domain protein;(source:Araport11) Ipc15G0000190 AT1G24450.1 Ribonuclease III family protein 0 Ribonuclease III family protein;(source:Araport11) Ipc15G0000180 AT1G10586.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0000170 AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc15G0000160 AT5G62520.1 similar to RCD one 5 Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. similar to RCD one 5;(source:Araport11) Ipc15G0000150 AT4G32180.1 pantothenate kinase 2 Encodes a protein with pantothenate kinase activity. pantothenate kinase 2;(source:Araport11) Ipc15G0000140 AT1G60610.5 0 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc15G0000130 AT5G62960.1 0 0 UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein;(source:Araport11) Ipc15G0000120 AT5G63000.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 0 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc15G0000110 AT5G50290.1 0 0 wall-associated receptor kinase galacturonan-binding protein;(source:Araport11) Ipc15G0000100 AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 2 A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems. homeobox knotted-like protein;(source:Araport11) Ipc15G0000090 AT4G24680.5 0 Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 associates with the promoter of SNC1 and regulates its expression. modifier of snc1;(source:Araport11) Ipc15G0000080 AT1G17100.1 SOUL heme-binding family protein 0 SOUL heme-binding family protein;(source:Araport11) Ipc15G0000070 AT1G79380.1 Ca(2)-dependent phospholipid-binding protein (Copine) family Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli. Ca(2)-dependent phospholipid-binding protein (Copine) family;(source:Araport11) Ipc15G0000060 AT5G50150.1 Protein of Unknown Function (DUF239) LOTR1 protein has an unknown function. It contains both DUF4409 and DUF239 domains. Loss of function mutations show defects in formation of the Casparian band- which is correlated with mis localization of CASP1. NEP-interacting protein, putative (DUF239);(source:Araport11) Ipc15G0000050 AT5G63080.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc15G0000040 AT4G34140.1 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc15G0000030 #N/A #N/A #N/A #N/A Ipc15G0000020 AT3G11330.1 plant intracellular ras group-related LRR 9 Encodes PIRL9, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen. plant intracellular ras group-related LRR 9;(source:Araport11) Ipc15G0000010 AT1G21080.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc05G0023790 AT1G68120.1 basic pentacysteine 3 0 BASIC PENTACYSTEINE protein;(source:Araport11) Ipc13G0016230 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016220 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0016210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016190 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc13G0016180 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc13G0016160 AT1G53940.2 0 Encodes a lipase, has in vitro lipase activity with p-nitrophenyl acetate and p-nitrophenyl butyrate, gene expression induced by hormones, negatively regulates auxin signaling, involved in disease resistance GDSL-motif lipase 2;(source:Araport11) Ipc13G0016150 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0016140 AT3G09770.2 RING/U-box superfamily protein Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion. RING/U-box superfamily protein;(source:Araport11) Ipc13G0016130 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc13G0016120 AT1G77740.2 0 Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2 that is involved in regulating lateral root formation and root gravity response.The mRNA is cell-to-cell mobile. phosphatidylinositol-4-phosphate 5-kinase 2;(source:Araport11) Ipc12G0006130 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc12G0006120 AT1G18400.1 BR enhanced expression 1 Encodes the brassinosteroid signaling component BEE1 (BR-ENHANCED EXPRESSION 1). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BR enhanced expression 1;(source:Araport11) Ipc12G0006110 AT4G33970.1 Leucine-rich repeat (LRR) family protein Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc12G0006100 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc12G0006090 AT3G24540.1 Protein kinase superfamily protein Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). Protein kinase superfamily protein;(source:Araport11) Ipc12G0006080 AT4G00450.3 0 Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype. RNA polymerase II transcription mediator;(source:Araport11) Ipc12G0006070 AT3G23860.1 GTP-binding protein-related Encodes a GTP-binding related protein that acts as a negative regulator of pollen germination, pollen tube growth, and gametophyte senescence. GTP-binding protein-like protein;(source:Araport11) Ipc12G0006060 AT3G18360.1 VQ motif-containing protein Member of VQ gene family. VQ proteins are named for the VQ motif (FxxxVQxxTG), a conserved amino acid region. Interacts with members of WRKY gene family, involved in pollen development. VQ motif-containing protein;(source:Araport11) Ipc12G0006050 AT3G18360.1 VQ motif-containing protein Member of VQ gene family. VQ proteins are named for the VQ motif (FxxxVQxxTG), a conserved amino acid region. Interacts with members of WRKY gene family, involved in pollen development. VQ motif-containing protein;(source:Araport11) Ipc12G0006040 AT1G48840.1 Plant protein of unknown function (DUF639) 0 Plant protein of unknown function (DUF639);(source:TAIR10) Ipc12G0006030 AT3G18370.1 C2 domain-containing protein 0 C2 domain-containing protein;(source:Araport11) Ipc12G0006020 AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein 0 CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc12G0006010 AT1G73840.1 hydroxyproline-rich glycoprotein family protein Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals, CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0006000 AT3G18400.1 NAC domain containing protein 58 0 NAC domain containing protein 58;(source:Araport11) Ipc12G0005990 AT1G73850.2 0 0 DNA ligase (DUF1666);(source:Araport11) Ipc12G0005980 AT1G68490.1 0 0 translocase subunit seca;(source:Araport11) Ipc12G0005970 AT1G73860.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc12G0005960 AT1G70000.2 myb-like transcription factor family protein Encodes a MYB-like Domain transcription factor that plays a positive role in anthocyanin accumulation in response to light and cytokinin via repression of MYBL2.MYBD expression increased in response to light or cytokinin, and MYBD enhanced anthocyanin biosynthesis via the repression of MYBL2 encoding for a transcription factor that had a negative effect on this process. In addition, MYBD can bind in vivo to the MYBL2 promoter and a lower level of histone H3K9 acetylation (H3K9ac) at upstream region of MYBL2 in MYBD-OX in comparison to wild-type plants, implies that MYBD represses MYBL2 expression via an epigenetic mechanism. myb-like transcription factor family protein;(source:Araport11) Ipc12G0005950 AT3G02550.1 LOB domain-containing protein 41 0 LOB domain-containing protein 41;(source:Araport11) Ipc05G0024970 AT5G17160.1 0 0 aspartic/glutamic acid-rich protein;(source:Araport11) Ipc05G0024980 AT1G65295.1 0 0 ubiquitin carboxyl-terminal hydrolase;(source:Araport11) Ipc05G0024990 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0025000 AT5G53670.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0025010 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0019010 AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0019020 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0019030 AT3G05620.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc07G0019040 AT5G27920.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0019050 AT1G56230.1 Protein of unknown function (DUF1399) 0 enolase (DUF1399);(source:Araport11) Ipc07G0019060 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc07G0019070 AT1G09155.1 phloem protein 2-B15 0 phloem protein 2-B15;(source:Araport11) Ipc07G0019080 AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0019090 AT3G16785.1 phospholipase D P1 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation. phospholipase D P1;(source:Araport11) Ipc07G0019100 AT3G56210.4 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc07G0019110 AT4G24380.6 0 0 dihydrofolate reductase;(source:Araport11) Ipc07G0019120 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc07G0019130 AT4G09630.2 0 0 transmembrane protein (DUF616);(source:Araport11) Ipc07G0019140 AT5G27030.1 TOPLESS-related 3 0 TOPLESS-related 3;(source:Araport11) Ipc07G0019150 AT5G27020.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0019160 AT5G20650.1 copper transporter 5 Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis. copper transporter 5;(source:Araport11) Ipc07G0019170 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc07G0019180 AT3G05670.3 0 0 RING/U-box protein;(source:Araport11) Ipc07G0019190 AT3G05700.1 Drought-responsive family protein Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress. Drought-responsive family protein;(source:Araport11) Ipc07G0019200 AT3G05710.2 syntaxin of plants 43 Encodes a member of SYP4 Gene Family that is a plant ortholog of the Tlg2/syntaxin16 Qa-SNARE. Together with SYP42, it regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN and is required for extracellular resistance responses to a fungal pathogen. syntaxin of plants 43;(source:Araport11) Ipc07G0019210 AT4G37190.1 0 0 plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein;(source:Araport11) Ipc07G0019220 AT4G16143.2 importin alpha isoform 2 Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 2;(source:Araport11) Ipc07G0019230 AT4G25800.2 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc07G0019240 AT1G56310.2 0 DEDDy-type 3′ -> 5′ exoribonuclease involved in miRNA degradation. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc07G0019250 AT3G05725.1 Protein of unknown function (DUF3511) 0 hypothetical protein (DUF3511);(source:Araport11) Ipc07G0019260 AT5G26910.4 0 Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division. GPI-anchored adhesin-like protein;(source:Araport11) Ipc07G0019270 AT3G62630.1 Protein of unknown function (DUF1645) 0 stress response NST1-like protein (DUF1645);(source:Araport11) Ipc07G0019280 AT2G47470.1 thioredoxin family protein Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. The mRNA is cell-to-cell mobile. thioredoxin family protein;(source:Araport11) Ipc07G0019290 AT5G15450.1 casein lytic proteinase B3 Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3;(source:Araport11) Ipc07G0019300 AT4G29530.1 Pyridoxal phosphate phosphatase-related protein Encodes a thiamin monophosphate phosphatase. Knockouts show no visible defects either in morphology or thiamin, ThMP and ThDP levels suggesting that Arabidopsis at least one other source of ThMPase activity. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc07G0019310 AT2G20340.2 0 Encodes an aromatic aldehyde synthase (AtAAS), which catalyzes the in vitro conversion of phenylalanine and 3,4-dihydroxy-L-phenylalanine to phenylacetaldehyde and dopaldehyde, respectively.The mRNA is cell-to-cell mobile. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc07G0019320 AT4G02080.1 secretion-associated RAS super family 2 A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. secretion-associated RAS super family 2;(source:Araport11) Ipc07G0019330 AT4G16155.1 dihydrolipoyl dehydrogenases 0 dihydrolipoamide dehydrogenase;(source:Araport11) Ipc07G0019340 AT1G56340.2 calreticulin 1a Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Post-transcriptionally regulates together with CRT2 VAMP721/722 levels under ER stress. calreticulin 1a;(source:Araport11) Ipc07G0019350 AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III Integral chloroplast outer membrane protein. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-III;(source:Araport11) Ipc07G0000790 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0000800 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0000810 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc07G0000830 AT2G36630.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc07G0000840 AT4G38500.1 Protein of unknown function (DUF616) 0 Sept9 (DUF616);(source:Araport11) Ipc07G0000850 AT1G77420.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0000860 AT3G12590.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0009710 AT5G02070.1 Protein kinase family protein 0 Protein kinase family protein;(source:Araport11) Ipc08G0009720 AT1G09160.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc08G0009730 AT1G09170.5 0 0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11) Ipc08G0009740 AT3G05670.3 0 0 RING/U-box protein;(source:Araport11) Ipc08G0009750 AT3G05700.1 Drought-responsive family protein Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress. Drought-responsive family protein;(source:Araport11) Ipc08G0009760 AT5G57580.1 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc08G0009770 AT5G03250.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc12G0001640 AT3G45245.1 ECA1 gametogenesis related family protein Encodes a ECA1 gametogenesis related family protein ECA1 gametogenesis related family protein;(source:Araport11) Ipc12G0001630 AT1G80490.1 TOPLESS-related 1 0 TOPLESS-related 1;(source:Araport11) Ipc12G0001650 AT4G36700.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc12G0001660 AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc12G0001670 AT5G11090.1 serine-rich protein-related 0 serine-rich protein-like protein;(source:Araport11) Ipc12G0001680 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc12G0001690 AT3G02645.1 Plant protein of unknown function (DUF247) 0 transmembrane protein, putative (DUF247);(source:Araport11) Ipc12G0001700 AT2G27060.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0001710 AT5G02270.1 non-intrinsic ABC protein 9 member of NAP subfamily non-intrinsic ABC protein 9;(source:Araport11) Ipc12G0001720 AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0001730 AT1G80570.3 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc12G0001740 AT1G80580.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc12G0001750 AT1G80610.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0001760 AT4G16340.2 0 Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects. guanyl-nucleotide exchange factors;(source:Araport11) Ipc12G0001770 AT1G80660.1 H(+)-ATPase 9 0 H[+]-ATPase 9;(source:Araport11) Ipc12G0001780 AT1G06980.1 0 0 6,7-dimethyl-8-ribityllumazine synthase;(source:Araport11) Ipc12G0001790 AT1G80650.1 RNAse THREE-like protein 1 0 RNAse THREE-like protein 1;(source:Araport11) Ipc12G0001800 AT3G61590.1 Galactose oxidase/kelch repeat superfamily protein F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc13G0017830 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0017840 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc13G0017850 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc13G0017860 #N/A #N/A #N/A #N/A Ipc13G0017870 AT4G13510.1 ammonium transporter 1;1 Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. The mRNA is cell-to-cell mobile. ammonium transporter 1;(source:Araport11) Ipc13G0017880 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0017890 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0017900 AT5G17600.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0017910 AT1G69060.1 Chaperone DnaJ-domain superfamily protein 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc13G0017920 AT2G33255.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc13G0017930 AT2G32235.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017940 AT1G64850.1 Calcium-binding EF hand family protein 0 Calcium-binding EF hand family protein;(source:Araport11) Ipc13G0017950 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc13G0017960 AT5G63770.2 diacylglycerol kinase 2 a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold. diacylglycerol kinase 2;(source:Araport11) Ipc13G0017970 AT1G73320.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0017980 AT3G46460.3 0 0 ubiquitin-conjugating enzyme 13;(source:Araport11) Ipc13G0017990 AT1G17750.1 PEP1 receptor 2 Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. PEP1 receptor 2;(source:Araport11) Ipc13G0018000 AT1G73320.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0018010 AT3G03530.1 non-specific phospholipase C4 PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. non-specific phospholipase C4;(source:Araport11) Ipc06G0015290 AT5G22860.1 Serine carboxypeptidase S28 family protein 0 Serine carboxypeptidase S28 family protein;(source:Araport11) Ipc14G0016480 AT4G17870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc14G0016490 AT5G18170.1 glutamate dehydrogenase 1 Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. glutamate dehydrogenase 1;(source:Araport11) Ipc14G0016470 AT2G19590.1 ACC oxidase 1 encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase ACC oxidase 1;(source:Araport11) Ipc14G0016460 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0016450 AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. MYC2 interacts with EIN3 and EIL1 to repress hook curvature and resistance to Botrytis cinera.Its transcription is induced by dehydration stress, ABA treatment and blue light via CRY1. Negative regulator of blue light-mediated photomorphogenic growth and blue and far-red-light-regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. For example it binds to and regulates the expression of NST1. Its stability is modulated by PUB10 through polyubiquitination. Basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11) Ipc14G0016440 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc14G0016430 AT1G54140.1 TATA binding protein associated factor 21kDa subunit putative TATA binding protein associated factor 21kDa TATA binding protein associated factor 21kDa subunit;(source:Araport11) Ipc14G0016420 AT5G46750.1 ARF-GAP domain 9 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. The mRNA is cell-to-cell mobile. ARF-GAP domain 9;(source:Araport11) Ipc14G0016410 AT4G17895.1 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20;(source:Araport11) Ipc14G0016400 AT2G03580.1 F-box family protein-related 0 F-box family protein-like protein;(source:Araport11) Ipc14G0016390 AT1G32690.1 0 0 DUF740 family protein;(source:Araport11) Ipc14G0016380 AT4G17900.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc14G0016370 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0016360 #N/A #N/A #N/A #N/A Ipc14G0016350 AT2G29540.2 RNApolymerase 14 kDa subunit RNA polymerase I(A) and III(C) 14 kDa subunit RNApolymerase 14 kDa subunit;(source:Araport11) Ipc14G0016340 AT5G46700.1 Tetraspanin family protein Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Tetraspanin family protein;(source:Araport11) Ipc14G0016330 AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0019180 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0019170 AT5G48520.2 0 Encodes AUGMIN subunit3 (AUG3), a homolog of animal dim gamma-tubulin 3/human augmin-like complex, subunit 3. Plays a critical role in microtubule organization during plant cell division. HAUS augmin-like complex subunit;(source:Araport11) Ipc10G0019160 AT3G07420.1 asparaginyl-tRNA synthetase 2 Encodes an asparaginyl-tRNA synthetase. asparaginyl-tRNA synthetase 2;(source:Araport11) Ipc07G0020570 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc07G0004030 AT1G34510.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc07G0004020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0020560 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0024080 AT1G13940.2 0 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc05G0024070 AT5G04190.1 phytochrome kinase substrate 4 Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism. It is phosphorylated in a phot1-dependent manner in vitro. Phosphorylation is transient and regulated by a type 2- protein phosphatase. phytochrome kinase substrate 4;(source:Araport11) Ipc05G0024060 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc14G0001420 AT4G12350.1 myb domain protein 42 Encodes a putative transcription factor (MYB42). myb domain protein 42;(source:Araport11) Ipc08G0007930 AT5G50400.1 purple acid phosphatase 27 0 purple acid phosphatase 27;(source:Araport11) Ipc08G0007920 AT2G12400.1 0 0 plasma membrane fusion protein;(source:Araport11) Ipc08G0007910 AT1G13350.3 0 Paralog of PRP4KA. Protein kinase superfamily protein;(source:Araport11) Ipc08G0007900 AT2G30590.1 WRKY DNA-binding protein 21 Encodes WRKY DNA-binding protein 21 (WRKY21). WRKY DNA-binding protein 21;(source:Araport11) Ipc08G0007890 AT5G45150.1 RNAse THREE-like protein 3 0 RNAse THREE-like protein 3;(source:Araport11) Ipc08G0007880 AT5G11090.1 serine-rich protein-related 0 serine-rich protein-like protein;(source:Araport11) Ipc08G0007870 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc08G0007860 AT1G49160.1 Protein kinase superfamily protein Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its Protein kinase superfamily protein;(source:Araport11) Ipc08G0007850 AT1G80530.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0007840 AT1G80530.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0007830 AT1G49360.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0007820 AT3G52490.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0007810 AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc08G0007800 AT5G35080.1 0 Encodes a protein involved in the endoplasmic reticulum-associated degradation of glycoproteins. ER lectin-like protein;(source:Araport11) Ipc10G0019600 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc10G0019610 AT1G48900.2 Signal recognition particle, SRP54 subunit protein 0 Signal recognition particle, SRP54 subunit protein;(source:Araport11) Ipc14G0019700 ATCG01100.1 NADH dehydrogenase family protein NADH dehydrogenase ND1 NADH dehydrogenase family protein;(source:Araport11) Ipc14G0019710 ATMG00830.1 cytochrome C biogenesis 382 cytochrome c biogenesis orf382 cytochrome C biogenesis 382;(source:Araport11) Ipc14G0019720 ATMG00270.1 NADH dehydrogenase 6 NADH dehydrogenase subunit 6 NADH dehydrogenase 6;(source:Araport11) Ipc14G0019730 AT4G13610.1 DNA (cytosine-5-)-methyltransferase family protein 0 DNA (cytosine-5-)-methyltransferase family protein;(source:Araport11) Ipc14G0019740 ATCG00780.1 ribosomal protein L14 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex ribosomal protein L14;(source:Araport11) Ipc14G0019750 ATMG00090.1 structural constituent of ribosome;protein binding ribosomal protein S3 structural constituent of ribosome;(source:Araport11) Ipc14G0019780 AT5G47320.1 ribosomal protein S19 Nuclear encoded mitochondrial ribosome subunit. The mRNA is cell-to-cell mobile. ribosomal protein S19;(source:Araport11) Ipc14G0019790 ATMG00570.1 Sec-independent periplasmic protein translocase encodes a protein of unknown function. The transcript has extensive RNA editing at the 3' end. Protein has orthologous in other plants and sequence is similar to E. coli ORFs orf154 and orf131, both of unknown function. So far, similar proteins are found only in plants and prokaryotes. Sec-independent periplasmic protein translocase;(source:Araport11) Ipc14G0019800 AT3G52990.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc14G0019810 AT5G27410.4 0 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). Note that the At5g27410.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11) Ipc14G0019820 AT5G03720.2 0 Member of Heat Stress Transcription Factor (Hsf) family. Expression is regulated by DREB2A and in turn HSFA3 regulates the expression of hsps Hsp18.1-CI and Hsp26.5-MII35S. Involved in establishing thermotolerence. heat shock transcription factor A3;(source:Araport11) Ipc14G0019830 AT5G03730.2 Protein kinase superfamily protein Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. Protein kinase superfamily protein;(source:Araport11) Ipc07G0000480 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0000500 AT3G23760.1 0 0 transferring glycosyl group transferase;(source:Araport11) Ipc07G0000520 AT5G51030.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc07G0000530 AT4G35800.2 0 Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit. RNA polymerase II large subunit;(source:Araport11) Ipc10G0018890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0018880 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0018870 AT2G31530.1 SecY protein transport family protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. SecY protein transport family protein;(source:Araport11) Ipc10G0018860 AT1G67320.2 DNA primase, large subunit family 0 DNA primase, large subunit family;(source:Araport11) Ipc10G0018850 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0018840 AT2G41770.1 Protein of unknown function (DUF288) Regulates the assembly and trafficking of cellulose synthase complexes. transmembrane protein, putative (DUF288);(source:Araport11) Ipc03G0020770 AT4G35700.1 zinc finger (C2H2 type) family protein Target promoter of the male germline-specific transcription factor DUO1. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc07G0000600 AT1G45170.2 0 0 outer envelope pore 24B-like protein;(source:Araport11) Ipc07G0000590 AT4G13890.2 0 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc07G0000580 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc01G0024850 AT2G25625.2 0 0 histone deacetylase-like protein;(source:Araport11) Ipc01G0024840 AT5G40710.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc01G0024820 AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development. RNA recognition motif and CCHC-type zinc finger domains containing protein;(source:Araport11) Ipc01G0024810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0024800 AT1G01990.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0024790 AT3G12810.1 SNF2 domain-containing protein / helicase domain-containing protein Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). The mRNA is cell-to-cell mobile. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc01G0028200 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc01G0028190 AT5G02740.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc01G0028180 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc01G0028170 #N/A #N/A #N/A #N/A Ipc01G0028160 AT1G60450.1 galactinol synthase 7 Predicted to encode a galactinol synthase. galactinol synthase 7;(source:Araport11) Ipc01G0028150 AT5G19260.1 Protein of unknown function (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc01G0028140 #N/A #N/A #N/A #N/A Ipc12G0000400 AT1G15660.1 centromere protein C Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions. centromere protein C;(source:Araport11) Ipc12G0000390 AT1G80440.1 Galactose oxidase/kelch repeat superfamily protein Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB20, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. The mRNA is cell-to-cell mobile. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0000380 AT3G15940.2 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc12G0000370 AT1G80000.3 0 0 CASC3/Barentsz eIF4AIII binding protein;(source:Araport11) Ipc12G0000360 AT1G12663.1 0 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. thionin-like protein;(source:Araport11) Ipc12G0000350 AT3G15970.2 0 0 NUP50 (Nucleoporin 50 kDa) protein;(source:Araport11) Ipc12G0000340 AT1G52360.4 0 0 Coatomer, beta subunit;(source:Araport11) Ipc12G0000330 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc12G0000320 AT3G27670.1 ARM repeat superfamily protein A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development. The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc12G0000310 AT1G28060.3 0 0 Pre-mRNA-splicing factor 3;(source:Araport11) Ipc12G0000300 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0000290 AT2G27730.4 0 0 copper ion binding protein;(source:Araport11) Ipc12G0000280 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc12G0000270 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0000260 AT3G15990.1 sulfate transporter 3;4 Encodes sulfate transporter Sultr3;4. sulfate transporter 3;(source:Araport11) Ipc12G0000250 AT1G79985.3 0 0 structural molecules protein;(source:Araport11) Ipc12G0000240 AT3G05680.2 embryo defective 2016 Encodes a splicing/methylation factor that is a homologue to the mammalian VIRILIZER, is member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. Analysis of transcriptional profiles of the vir-1 mutant suggests that VIR is likely involved in regulation of gene expression, but the function of VIR is rather general than specific and knock-down of VIR does not affect overall splicing rates. embryo defective 2016;(source:Araport11) Ipc12G0000230 AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. CDT1-like protein B;(source:Araport11) Ipc12G0000220 AT1G73390.7 0 0 Endosomal targeting BRO1-like domain-containing protein;(source:Araport11) Ipc12G0000210 AT5G24760.1 GroES-like zinc-binding dehydrogenase family protein 0 GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) Ipc12G0000200 AT5G36970.1 NDR1/HIN1-like 25 NDR1/HIN1-like protein, expression induced during incompatible response to a pathogen, expression is at least partly dependent on the salicylic acid signaling pathway NDR1/HIN1-like 25;(source:Araport11) Ipc12G0000190 AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc12G0000180 AT2G16676.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc12G0000170 AT5G28910.2 0 0 alpha-(1,6)-fucosyltransferase;(source:Araport11) Ipc12G0000160 #N/A #N/A #N/A #N/A Ipc12G0000150 AT3G19980.1 flower-specific, phytochrome-associated protein phosphatase 3 Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.Acts antagonistically to SnRK2 to regulate ABI5 phosphorylation. It inteacts with NRP which results in tethering to endosomes leading to its degradation. flower-specific, phytochrome-associated protein phosphatase 3;(source:Araport11) Ipc12G0000140 AT1G28150.2 0 0 hypothetical protein;(source:Araport11) Ipc12G0000130 AT5G40440.4 0 Encodes a mitogen-activated protein kinase kinase. Activates MPK8 and is a target of MPKKK20. Mutant root growth is sensitive oryzalin and suggestive of a role in signaling during microtubule organization. mitogen-activated protein kinase kinase 3;(source:Araport11) Ipc12G0000120 AT1G17710.2 Pyridoxal phosphate phosphatase-related protein Encodes a phosphoethanolamine/phosphocholine phosphatase. It is likely to be involved in the liberation of inorganic phosphate from intracellular sources. Expression is upregulated in the shoot of cax1/cax3 mutant. Pyridoxal phosphate phosphatase-related protein;(source:Araport11) Ipc12G0000110 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0000100 AT3G18090.2 0 Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated. nuclear RNA polymerase D2B;(source:Araport11) Ipc12G0000090 AT1G73190.1 Aquaporin-like superfamily protein Moves to the Protein Storage Vacuole in a Golgi independent manner Aquaporin-like superfamily protein;(source:Araport11) Ipc12G0000080 AT5G58210.4 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0000070 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc12G0000060 AT5G08370.1 alpha-galactosidase 2 Member of Glycoside Hydrolase Family 27 (GH27)that functions as an α-galactosidase. alpha-galactosidase 2;(source:Araport11) Ipc12G0000050 AT1G17820.1 Putative integral membrane protein conserved region (DUF2404) 0 testis-expressed sequence 2-like protein (DUF2404);(source:Araport11) Ipc12G0000040 AT1G62440.1 leucine-rich repeat/extensin 2 encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis. leucine-rich repeat/extensin 2;(source:Araport11) Ipc12G0000030 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc12G0000020 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc14G0000880 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0000890 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0007530 AT5G55860.1 Plant protein of unknown function (DUF827) WEB1/PMI2 related protein involved in mecahnotransduction.TREPH1 is phosphorylated at position S625 in response to touch, and this is required for mechanosensitive growth response. weak chloroplast movement under blue light protein (DUF827);(source:Araport11) Ipc12G0007520 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0007510 AT3G20980.1 Gag-Pol-related retrotransposon family protein 0 Gag-Pol-related retrotransposon family protein;(source:Araport11) Ipc12G0007500 AT1G74360.1 Leucine-rich repeat protein kinase family protein NILR1 encodes a serine/threonine kinase involved in defense response to nematodes. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0007490 AT1G26620.1 Plant protein of unknown function (DUF863) 0 T-box transcription factor, putative (DUF863);(source:Araport11) Ipc12G0007480 AT4G12240.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc12G0007470 AT1G72740.1 Homeodomain-like/winged-helix DNA-binding family protein Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain. Homeodomain-like/winged-helix DNA-binding family protein;(source:Araport11) Ipc12G0007460 AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc12G0007450 AT5G07800.1 Flavin-binding monooxygenase family protein 0 Flavin-binding monooxygenase family protein;(source:Araport11) Ipc12G0007440 AT3G53840.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0007430 AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein 0 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein;(source:Araport11) Ipc12G0007420 AT3G50370.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0007410 AT1G58230.2 0 0 binding protein;(source:Araport11) Ipc12G0007400 AT5G07830.1 glucuronidase 2 Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation. The mRNA is cell-to-cell mobile. glucuronidase 2;(source:Araport11) Ipc12G0007390 AT5G61210.2 0 membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationThe mRNA is cell-to-cell mobile. soluble N-ethylmaleimide-sensitive factor adaptor protein 33;(source:Araport11) Ipc12G0007380 AT5G15530.1 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA, biotin carboxyl carrier protein 2;(source:Araport11) Ipc12G0007370 AT2G21235.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc12G0007360 AT5G07960.1 0 0 asterix-like protein;(source:Araport11) Ipc12G0007350 AT5G07980.2 0 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc12G0007340 AT5G61150.2 leo1-like family protein Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. Member of PAF-C complex. leo1-like family protein;(source:Araport11) Ipc12G0007330 AT3G05010.1 Protein of unknown function, transmembrane-40 Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. Protein of unknown function, transmembrane-40;(source:Araport11) Ipc12G0007320 AT1G18650.1 plasmodesmata callose-binding protein 3 Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose. plasmodesmata callose-binding protein 3;(source:Araport11) Ipc12G0007310 AT5G37350.1 Serine/threonine-protein kinase Rio1 0 Serine/threonine-protein kinase Rio1;(source:Araport11) Ipc12G0007300 AT2G06040.1 0 Contributes to UV tolerance through nucleotide excision repair. F-box/LRR protein;(source:Araport11) Ipc12G0007290 AT1G74250.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc12G0007280 AT1G18640.2 3-phosphoserine phosphatase Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast. Essential for embryo, pollen and root development. 3-phosphoserine phosphatase;(source:Araport11) Ipc12G0007270 #N/A #N/A #N/A #N/A Ipc12G0007260 AT5G61030.2 0 Encodes a glycine-rich RNA binding protein that is involved in C-> U RNA editing in mitochondria. Gene expression is induced by cold.The mRNA is cell-to-cell mobile. glycine-rich RNA-binding protein 3;(source:Araport11) Ipc12G0007250 AT2G29900.1 Presenilin-2 Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments. Presenilin-2;(source:Araport11) Ipc12G0007240 AT3G29400.1 exocyst subunit exo70 family protein E1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein E1;(source:Araport11) Ipc12G0007230 AT3G51550.1 Malectin/receptor-like protein kinase family protein Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc12G0007220 AT2G03630.2 0 0 suppressor SRP40-like protein;(source:Araport11) Ipc12G0007210 AT1G66350.1 RGA-like 1 Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. RGA-like 1;(source:Araport11) Ipc12G0007200 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc12G0007190 AT5G08050.1 Protein of unknown function (DUF1118) Encodes a grana core localized protein. Mutant plants have reduced NPQ, affected organization of light-havesting complex II and an enhanced grana stacking. wiskott-aldrich syndrome family protein, putative (DUF1118);(source:Araport11) Ipc12G0007180 AT5G60980.4 0 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc10G0013500 AT5G36930.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0013510 AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc06G0016010 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc02G0000500 AT5G63890.1 histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase;(source:Araport11) Ipc02G0000490 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc02G0000480 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000470 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc02G0000460 AT4G35110.4 Arabidopsis phospholipase-like protein (PEARLI 4) family 0 phospholipase-like protein (PEARLI 4) family protein;(source:Araport11) Ipc02G0000450 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0007540 AT3G19960.5 0 member of Myosin-like proteins myosin 1;(source:Araport11) Ipc07G0007550 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc07G0007560 AT3G19970.5 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0007570 AT5G23340.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc07G0007580 AT1G05460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0007590 AT4G08960.1 phosphotyrosyl phosphatase activator (PTPA) family protein 0 phosphotyrosyl phosphatase activator (PTPA) family protein;(source:Araport11) Ipc07G0007600 AT5G08320.1 0 0 E2F-associated phosphoprotein;(source:Araport11) Ipc07G0007620 AT1G50320.1 thioredoxin X encodes a prokaryotic thioredoxin thioredoxin X;(source:Araport11) Ipc07G0007610 AT3G19950.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0007630 AT5G23280.1 TCP family transcription factor Transcription factor which plays an important role during leaf and hypocotyl development, redundantly, with at least six class I TCPs, and regulates the expression of CYCD1;1 to affect endoreplication. TCP family transcription factor;(source:Araport11) Ipc07G0007640 AT3G19910.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0007650 AT4G14320.1 Zinc-binding ribosomal protein family protein 0 Zinc-binding ribosomal protein family protein;(source:Araport11) Ipc07G0007660 AT5G23150.2 0 Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function. HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions.The mRNA is cell-to-cell mobile. Tudor/PWWP/MBT domain-containing protein;(source:Araport11) Ipc07G0007670 AT5G08200.1 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc07G0007680 AT3G46530.1 NB-ARC domain-containing disease resistance protein Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. The mRNA is cell-to-cell mobile. NB-ARC domain-containing disease resistance protein;(source:Araport11) Ipc07G0007690 AT2G37410.2 translocase inner membrane subunit 17-2 Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway. translocase inner membrane subunit 17-2;(source:Araport11) Ipc07G0007700 AT1G48930.1 glycosyl hydrolase 9C1 0 glycosyl hydrolase 9C1;(source:Araport11) Ipc07G0007710 AT2G37040.1 PHE ammonia lyase 1 Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4). PHE ammonia lyase 1;(source:Araport11) Ipc07G0007720 AT1G08060.3 0 Encodes a transcriptional silencer that is required for proper expression of PRR/NLR immune receptor genes. ATP-dependent helicase family protein;(source:Araport11) Ipc07G0007730 AT2G37030.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc07G0007740 AT3G09830.3 0 Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae. Protein kinase superfamily protein;(source:Araport11) Ipc07G0007750 AT5G03330.2 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc07G0007760 AT2G36990.1 RNApolymerase sigma-subunit F Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation. RNApolymerase sigma-subunit F;(source:Araport11) Ipc07G0007770 AT5G41220.2 0 Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002). glutathione S-transferase THETA 3;(source:Araport11) Ipc07G0007780 AT5G60770.1 nitrate transporter 2.4 member of High affinity nitrate transporter family nitrate transporter 2.4;(source:Araport11) Ipc07G0007790 AT2G36970.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0007800 AT3G12780.1 phosphoglycerate kinase 1 PGK1 was localized exclusively in the chloroplasts of photosynthetic tissues and is the photosynthetic isoform. The pgk1.1 knock-down mutant displayed reduced growth, lower photosynthetic capacity and starch content. Expression studies in PGK mutants showed that PGK1 and PGK3 were down-regulated in pgk3.2 and pgk1.1, respectively. These results indicate that the down-regulation of photosynthetic activity could be a plant strategy when glycolysis is impaired to achieve metabolic adjustment and optimize growth (DOI:10.1104/pp.17.01227).Functions redundantly with AT1G56190 in the chloroplast in the biosynthesis of thylakoid membrane galactolipids. Double mutants are photosynthetically incompetent, plants are albino and seedling lethal phosphoglycerate kinase 1;(source:Araport11) Ipc07G0007810 AT1G74830.1 Protein of unknown function, DUF593 0 myosin-binding protein, putative (Protein of unknown function, DUF593);(source:Araport11) Ipc07G0007820 AT2G02720.1 Pectate lyase family protein 0 Pectate lyase family protein;(source:Araport11) Ipc07G0007830 AT5G03380.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc07G0007840 #N/A #N/A #N/A #N/A Ipc07G0007850 AT2G36930.1 zinc finger (C2H2 type) family protein 0 zinc finger (C2H2 type) family protein;(source:Araport11) Ipc07G0007860 AT2G36910.1 ATP binding cassette subfamily B1 Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues. The mRNA is cell-to-cell mobile. ATP binding cassette subfamily B1;(source:Araport11) Ipc07G0007870 AT2G36895.1 0 0 D-tagatose-1,6-bisphosphate aldolase subunit;(source:Araport11) Ipc07G0007880 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc07G0007890 AT5G03420.1 5'-AMP-activated protein kinase-related Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. Mutants lacking PTST3 have fewer starch granules in leaf chloroplasts than the wild type. PTST3 interacts with PTST2, which is also involved in granule initiation. 5-AMP-activated protein kinase-like protein;(source:Araport11) Ipc07G0007900 AT2G36880.2 methionine adenosyltransferase 3 0 methionine adenosyltransferase 3;(source:Araport11) Ipc07G0007910 AT3G05240.1 mitochondrial editing factor 19 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 19;(source:Araport11) Ipc07G0007920 AT2G36870.1 xyloglucan endotransglucosylase/hydrolase 32 Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1). By sequence similarity to XTH31 (At3g44990) and in vivo analysis, likely to exhibit predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). xyloglucan endotransglucosylase/hydrolase 32;(source:Araport11) Ipc07G0007930 AT2G36840.1 ACT-like superfamily protein Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. ACT-like superfamily protein;(source:Araport11) Ipc07G0007940 AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.Functions redundantly with the beta subunit do maintain sister chromatid cohesion during meiosis. Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc07G0007950 AT2G36835.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0007960 AT3G53190.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc07G0007970 AT1G08080.1 alpha carbonic anhydrase 7 0 alpha carbonic anhydrase 7;(source:Araport11) Ipc07G0007980 AT5G22920.1 CHY-type/CTCHY-type/RING-type Zinc finger protein Encodes a protein with sequence similarity to RING, zinc finger proteins. Loss of function mutations show reduced (15%) stomatal aperture under non stress conditions. CHY-type/CTCHY-type/RING-type Zinc finger protein;(source:Araport11) Ipc07G0007990 AT5G03510.1 C2H2-type zinc finger family protein 0 C2H2-type zinc finger family protein;(source:Araport11) Ipc07G0008000 AT5G03530.2 0 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes. RAB GTPase homolog C2A;(source:Araport11) Ipc07G0008010 AT3G53180.1 glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases Encodes a protein that is the product of a fusion gene with a C-terminal GSI like sequence and an N-terminal part sharing homology with nodulins. It self-assembles into oligomers and its expression is increased in response to flagellin treatment. The protein co-localizes with microtubules and binds gamma-tubulin. RNAi lines are affected in root morphogenesis. nodulin/glutamine synthase-like protein;(source:Araport11) Ipc07G0008020 AT2G36800.1 don-glucosyltransferase 1 Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype. don-glucosyltransferase 1;(source:Araport11) Ipc07G0008030 AT2G36780.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc07G0008040 AT3G53150.1 UDP-glucosyl transferase 73D1 0 UDP-glucosyl transferase 73D1;(source:Araport11) Ipc07G0008050 AT5G52280.1 Myosin heavy chain-related protein 0 Myosin heavy chain-related protein;(source:Araport11) Ipc07G0008060 AT3G53130.1 Cytochrome P450 superfamily protein Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3. Cytochrome P450 superfamily protein;(source:Araport11) Ipc07G0008070 AT2G36690.2 0 Protein belonging to the Fe-dependent 2-oxoglutarate dioxygenase superfamily, catalyzes the stereospecific hydration of GA12 to produce DHGA12, negatively regulates ABA sensitivity during germination, phototrophic establishment and seedling development. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc07G0008080 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc07G0008090 AT5G17600.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0008100 AT2G27930.4 0 0 PLATZ transcription factor family protein;(source:Araport11) Ipc07G0008110 AT5G03560.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc07G0008120 AT3G53110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0008130 AT2G36670.2 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0008140 AT4G29870.1 Oligosaccharyltransferase complex/magnesium transporter family protein 0 Oligosaccharyltransferase complex/magnesium transporter family protein;(source:Araport11) Ipc07G0008150 AT2G36660.1 poly(A) binding protein 7 polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins. poly(A) binding protein 7;(source:Araport11) Ipc07G0008160 AT1G80190.6 0 Similar to the PSF1 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication. partner of SLD five 1;(source:Araport11) Ipc07G0008170 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc07G0008180 AT5G03800.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc07G0008190 AT1G31740.1 beta-galactosidase 15 Encodes a putative β-galactosidase. beta-galactosidase 15;(source:Araport11) Ipc07G0008200 AT1G16850.1 0 0 transmembrane protein;(source:Araport11) Ipc07G0008210 AT1G31740.1 beta-galactosidase 15 Encodes a putative β-galactosidase. beta-galactosidase 15;(source:Araport11) Ipc07G0008220 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0008230 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0008240 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0008250 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0008260 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0008270 AT2G36620.1 ribosomal protein L24 RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020). ribosomal protein L24;(source:Araport11) Ipc07G0008280 AT5G03790.1 homeobox 51 Encodes a homeodomain leucine zipper class I (HD-Zip I) meristem identity regulator that acts together with LFY to induce CAL expression. It binds to the CAL promoter proximal CAATNATTG element. LMI1 acts primarily downstream of LFY in meristem identity regulation. The interaction between LFY, LMI1 and CAL resembles a feed-forward loop transcriptional network motif. The gene also had additional LFY-independent roles in leaf morphogenesis and bract formation. homeobox 51;(source:Araport11) Ipc07G0008290 AT3G10040.1 sequence-specific DNA binding transcription factors Encodes HRA1 (HYPOXIA RESPONSE ATTENUATOR1), a low oxygen-inducible transcription factor. sequence-specific DNA binding transcription factor;(source:Araport11) Ipc07G0008300 AT3G52990.1 Pyruvate kinase family protein 0 Pyruvate kinase family protein;(source:Araport11) Ipc07G0008310 AT3G10030.1 aspartate/glutamate/uridylate kinase family protein 0 aspartate/glutamate/uridylate kinase family protein;(source:Araport11) Ipc07G0008320 AT2G36570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc07G0008330 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc07G0008340 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc07G0008350 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc07G0008370 AT5G04550.2 0 0 type-1 restriction enzyme mjaxp r protein (DUF668);(source:Araport11) Ipc07G0008360 AT3G52970.1 cytochrome P450, family 76, subfamily G, polypeptide 1 member of CYP76G cytochrome P450, family 76, subfamily G, polypeptide 1;(source:Araport11) Ipc07G0008380 AT3G10020.1 0 0 plant/protein;(source:Araport11) Ipc07G0008390 AT3G52960.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc07G0008400 AT2G36530.1 Enolase Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. Enolase;(source:Araport11) Ipc07G0008410 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc07G0008420 AT2G36490.1 demeter-like 1 A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts. The ros1 mutant is more susceptible to biotrophic pathogens and is repressed in its responsiveness of salyclic acid-dependent defence genes. demeter-like 1;(source:Araport11) Ipc07G0008430 AT5G03730.2 Protein kinase superfamily protein Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. Protein kinase superfamily protein;(source:Araport11) Ipc07G0008440 AT2G36480.2 ENTH/VHS family protein 0 pre-mRNA cleavage complex 2 Pcf11-like protein;(source:Araport11) Ipc07G0008450 AT3G44735.2 PHYTOSULFOKINE 3 PRECURSOR Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. PHYTOSULFOKINE 3 PRECURSOR;(source:Araport11) Ipc04G0013380 AT1G75580.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc04G0013370 AT4G34760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc04G0013360 AT1G19920.1 Pseudouridine synthase/archaeosine transglycosylase-like family protein encodes a chloroplast form of ATP sulfurylase. Pseudouridine synthase/archaeosine transglycosylase-like family protein;(source:Araport11) Ipc04G0013350 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc04G0013340 AT1G20560.1 acyl activating enzyme 1 0 acyl activating enzyme 1;(source:Araport11) Ipc04G0013330 AT1G20560.1 acyl activating enzyme 1 0 acyl activating enzyme 1;(source:Araport11) Ipc04G0013320 AT5G42560.1 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0 Abscisic acid-responsive (TB2/DP1, HVA22) family protein;(source:Araport11) Ipc04G0013310 AT1G75720.2 Plant protein of unknown function (DUF827) 0 WEB family protein (DUF827);(source:Araport11) Ipc04G0013300 AT1G47840.1 hexokinase 3 Encodes a putative hexokinase. hexokinase 3;(source:Araport11) Ipc04G0013290 AT1G47830.1 SNARE-like superfamily protein 0 SNARE-like superfamily protein;(source:Araport11) Ipc04G0013280 AT1G75750.1 GAST1 protein homolog 1 GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data The mRNA is cell-to-cell mobile. GAST1 protein homolog 1;(source:Araport11) Ipc04G0013260 AT1G75760.3 0 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc04G0013270 AT4G38790.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc04G0013250 AT4G34860.3 0 0 Plant neutral invertase family protein;(source:Araport11) Ipc04G0013240 AT1G19980.1 cytomatrix protein-related 0 cytomatrix protein-like protein;(source:Araport11) Ipc04G0013230 AT1G75780.1 tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain;(source:Araport11) Ipc04G0013220 AT1G30755.6 0 0 elongation factor G, putative (DUF668);(source:Araport11) Ipc04G0013210 AT4G24175.1 0 0 kinesin-like protein;(source:Araport11) Ipc04G0013200 AT4G24180.1 THAUMATIN-LIKE PROTEIN 1 Root-specific expression activated in response to rhizobacteria and ACC. Role in induced systemic resistance. THAUMATIN-LIKE PROTEIN 1;(source:Araport11) Ipc04G0013190 AT4G24190.1 Chaperone protein htpG family protein encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. Chaperone protein htpG family protein;(source:Araport11) Ipc04G0013180 AT5G64920.1 COP1-interacting protein 8 Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5. COP1-interacting protein 8;(source:Araport11) Ipc04G0013170 AT1G75820.1 Leucine-rich receptor-like protein kinase family protein Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc04G0013160 AT1G20080.5 0 Encodes a synaptotagmin localized on the Golgi apparatus and that regulates protein secretion via the unconventional protein transport from the cytosol to the extracellular matrix in plant cells. Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc04G0013150 AT3G21570.1 0 0 proline-rich nuclear receptor coactivator;(source:Araport11) Ipc04G0013140 AT1G27940.1 P-glycoprotein 13 0 P-glycoprotein 13;(source:Araport11) Ipc04G0013130 AT1G75850.1 VPS35 homolog B 0 VPS35 homolog B;(source:Araport11) Ipc04G0013120 AT5G42150.1 Glutathione S-transferase family protein 0 Glutathione S-transferase family protein;(source:Araport11) Ipc04G0013110 AT4G35070.1 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc04G0013100 AT1G20110.1 RING/FYVE/PHD zinc finger superfamily protein Encodes a protein that is localized to the peripheral membrane of late endosomal compartments. Involved in the regulation of mulitivesicular/prevacuolar compartment protein sorting. Loss of function mutations are embryo lethal. Regulates IRT1-dependent metal transport and metal homeostasis. The mRNA is cell-to-cell mobile. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc04G0013090 AT1G75900.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0013050 AT1G02890.2 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0013080 AT1G76550.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc04G0013070 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0013060 AT2G29300.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0013040 #N/A #N/A #N/A #N/A Ipc04G0013030 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc04G0013020 AT4G38540.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc04G0013010 AT1G76010.2 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc04G0013000 AT1G76020.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc04G0012990 AT5G42200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0012980 AT1G60420.1 DC1 domain-containing protein Reduce transmission through pollen. The mRNA is cell-to-cell mobile. DC1 domain-containing protein;(source:Araport11) Ipc04G0012960 AT4G02390.1 poly(ADP-ribose) polymerase Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification . poly(ADP-ribose) polymerase;(source:Araport11) Ipc04G0012970 AT5G42200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0012950 AT2G23090.1 Uncharacterised protein family SERF 0 Uncharacterized protein family SERF;(source:Araport11) Ipc04G0012940 AT1G31420.2 Leucine-rich repeat protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc04G0012930 AT4G34660.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc04G0012920 AT1G31460.1 0 0 vitellogenin-2 protein;(source:Araport11) Ipc04G0012910 AT1G61590.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc04G0012900 AT5G45275.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc04G0012890 AT4G19420.2 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0012880 AT1G31600.4 0 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc04G0012870 AT3G13580.9 0 0 Ribosomal protein L30/L7 family protein;(source:Araport11) Ipc04G0012860 AT1G09730.2 Cysteine proteinases superfamily protein Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Cysteine proteinases superfamily protein;(source:Araport11) Ipc04G0012850 AT1G34340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc04G0012840 AT3G06720.2 importin alpha isoform 1 Encodes importin alpha involved in nuclear import. importin alpha isoform 1;(source:Araport11) Ipc04G0012830 AT5G49320.1 Protein of unknown function (DUF1218) 0 transmembrane protein, putative (DUF1218);(source:Araport11) Ipc04G0012820 AT1G48790.1 associated molecule with the SH3 domain of STAM 1 0 associated molecule with the SH3 domain of STAM 1;(source:Araport11) Ipc04G0012810 AT5G49340.1 TRICHOME BIREFRINGENCE-LIKE 4 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 4;(source:Araport11) Ipc04G0012800 AT5G49350.2 Glycine-rich protein family 0 Glycine-rich protein family;(source:Araport11) Ipc04G0012790 AT4G24220.2 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0012780 AT4G24220.2 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc04G0012770 AT4G30100.2 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0012760 AT4G16146.1 cAMP-regulated phosphoprotein 19-related protein 0 cAMP-regulated phosphoprotein 19-related protein;(source:Araport11) Ipc04G0012750 AT4G16150.1 calmodulin binding;transcription regulators CATMA5 is a transcriptional activator. It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes. calmodulin-binding transcription activator 5;(source:Araport11) Ipc04G0012740 AT4G02080.1 secretion-associated RAS super family 2 A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. secretion-associated RAS super family 2;(source:Araport11) Ipc04G0012730 AT3G06680.1 Ribosomal L29e protein family 0 Ribosomal L29e protein family;(source:Araport11) Ipc04G0012720 AT4G16160.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco. Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11) Ipc04G0012710 AT5G49400.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc04G0012700 AT4G16265.1 RNA polymerases M/15 Kd subunit One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At3g16980 RNA polymerases M/15 Kd subunit;(source:Araport11) Ipc04G0012690 AT3G03450.1 RGA-like 2 Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. RGA-like 2;(source:Araport11) Ipc04G0012680 AT3G03450.1 RGA-like 2 Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. RGA-like 2;(source:Araport11) Ipc04G0012670 AT3G17030.1 Nucleic acid-binding proteins superfamily 0 Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc04G0012660 AT4G24972.1 tapetum determinant 1 Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1. tapetum determinant 1;(source:Araport11) Ipc04G0012650 AT3G04690.1 Malectin/receptor-like protein kinase family protein Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc04G0012640 AT5G49460.2 0 One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL) ATP citrate lyase subunit B 2;(source:Araport11) Ipc04G0012630 AT2G18790.1 phytochrome B Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. Promotes seedling etiolation in both the presence and absence of phytochrome A. Overexpression results in etiolation under far-red light. Accumulates in the nucleus after exposure to far red light. The phosphorylation state of the Ser-86 residue of the phytochrome B molecule alters dark reversion of the molecule. The mRNA is cell-to-cell mobile. phytochrome B;(source:Araport11) Ipc04G0012620 AT5G49470.3 PAS domain-containing protein tyrosine kinase family protein Encodes a protein with similarity to RAF MAP Kinase that is expressed in most plant tissues. Based on loss of function and gain of function phenotypes, RAF10 appears to be involved in ABA response. PAS domain-containing protein tyrosine kinase family protein;(source:Araport11) Ipc04G0012610 AT4G16230.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc04G0012600 AT4G16210.1 enoyl-CoA hydratase/isomerase A 0 enoyl-CoA hydratase/isomerase A;(source:Araport11) Ipc04G0012590 AT4G16180.2 0 0 transmembrane protein;(source:Araport11) Ipc04G0012580 AT5G49480.1 Ca2+-binding protein 1 AtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl. The mRNA is cell-to-cell mobile. Ca2+-binding protein 1;(source:Araport11) Ipc04G0012570 AT5G49010.2 DNA replication protein-related Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication. DNA replication protein-like protein;(source:Araport11) Ipc04G0012560 AT3G12500.1 basic chitinase encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. basic chitinase;(source:Araport11) Ipc04G0012550 AT3G06600.3 0 At3G06600 encodes the plant KASH protein SINE3; SINE3 interacts with SUN1 and SUN2 and is localized at the nuclear envelope. transmembrane protein;(source:Araport11) Ipc04G0012540 AT3G06590.4 0 Encodes RITF1, a bHLH transcription factor that regulates the transcription of several genes involved in the detoxification of reactive oxygen species generated by salt stress. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc04G0012530 AT2G47260.1 WRKY DNA-binding protein 23 Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment and auxin mediated PIN polar localization in roots. Expression is induced by auxin. WRKY DNA-binding protein 23;(source:Araport11) Ipc04G0012520 AT5G23300.1 pyrimidine d dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis pyrimidine d;(source:Araport11) Ipc04G0012510 AT1G47960.2 0 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity. cell wall / vacuolar inhibitor of fructosidase 1;(source:Araport11) Ipc04G0012500 AT5G64270.1 splicing factor, putative 0 splicing factor;(source:Araport11) Ipc04G0012490 AT1G47960.2 0 Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity. cell wall / vacuolar inhibitor of fructosidase 1;(source:Araport11) Ipc04G0012480 AT3G06560.1 poly(A) polymerase 3 Encodes a poly(A) polymerase. Located in the cytoplasm. poly(A) polymerase 3;(source:Araport11) Ipc04G0012470 AT3G06550.3 O-acetyltransferase family protein Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Mutants show reduced cell wall polysaccharide acetylation and increased resistance to Botrytis cinerea. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis. O-acetyltransferase family protein;(source:Araport11) Ipc04G0012460 AT3G48810.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0012450 AT3G17170.1 Translation elongation factor EF1B/ribosomal protein S6 family protein 0 Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11) Ipc04G0012440 AT5G49580.3 0 0 Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc04G0012430 AT5G62650.1 Tic22-like family protein 0 Tic22-like family protein;(source:Araport11) Ipc04G0012420 AT3G06520.2 0 0 agenet domain-containing protein;(source:Araport11) Ipc04G0012410 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc04G0012400 AT1G56560.1 Plant neutral invertase family protein A/N-InvA is a neutral invertase that breaks sucrose down into fructose and glucose. It is member of the larger family of alkaline/neutral invertases (GH100). GFP-tagged A/N-InvA localizes to the mitochondria. atinva mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of A/N-InvA transcripts rise in response to a hydrogen peroxide treatment. Plant neutral invertase family protein;(source:Araport11) Ipc04G0012390 AT5G30510.1 ribosomal protein S1 0 ribosomal protein S1;(source:Araport11) Ipc04G0012380 AT5G46830.1 NACL-inducible gene 1 Calcium-binding transcription factor involved in salt stress signaling. calcium-binding transcription factor NIG1;(source:Araport11) Ipc04G0012370 AT3G17310.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Encodes DRM3 (Domains Rearranged Methyltransferase3), a catalytically mutated paralog of the cytosine methyltransferase DRM2. Despite being catalytically mutated, DRM3 is required for normal maintenance of non-CG DNA methylation, establishment of RNA-directed DNA methylation triggered by repeat sequences and accumulation of repeat-associated small RNAs. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc04G0012360 AT2G47160.1 HCO3- transporter family Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation. HCO3- transporter family;(source:Araport11) Ipc04G0012350 AT1G48090.6 0 0 calcium-dependent lipid-binding family protein;(source:Araport11) Ipc04G0012340 AT5G15640.1 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc04G0012330 AT3G62290.3 ADP-ribosylation factor A1E A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. The mRNA is cell-to-cell mobile. ADP-ribosylation factor A1E;(source:Araport11) Ipc04G0012310 AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein 0 Ribosomal protein S27a / Ubiquitin family protein;(source:Araport11) Ipc04G0012320 AT1G65349.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0012300 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc04G0012290 AT3G17340.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc04G0012280 AT3G17350.1 0 0 wall-associated receptor kinase carboxy-terminal protein;(source:Araport11) Ipc04G0012270 AT3G17470.2 0 0 Ca2+-activated RelA/spot-like protein;(source:Araport11) Ipc09G0012980 AT1G70550.1 Protein of Unknown Function (DUF239) 0 NEP-interacting protein, putative (DUF239);(source:Araport11) Ipc09G0012970 AT1G10740.4 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc09G0012960 AT3G48670.3 0 Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway. XH/XS domain-containing protein;(source:Araport11) Ipc09G0012950 AT5G44750.1 DNA-directed DNA polymerases Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). DNA-directed DNA polymerase;(source:Araport11) Ipc09G0012940 #N/A #N/A #N/A #N/A Ipc09G0012930 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc09G0012920 AT1G04860.1 ubiquitin-specific protease 2 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 2;(source:Araport11) Ipc09G0012910 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc09G0012900 AT5G14760.1 L-aspartate oxidase At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 L-aspartate oxidase;(source:Araport11) Ipc09G0012890 AT1G80260.1 Spc97 / Spc98 family of spindle pole body (SBP) component 0 Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11) Ipc09G0012880 AT5G14760.1 L-aspartate oxidase At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 L-aspartate oxidase;(source:Araport11) Ipc09G0012870 AT1G70520.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11) Ipc09G0012860 AT3G26370.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc09G0012850 AT1G13030.1 sphere organelles protein-related Encodes a plant coilin, a protein that in other organisms is a major structural scaffolding protein necessary for Cajal body formation, composition and activity. It has been shown to bind both U1 and U1 snRNAs in vitro. sphere organelles protein-like protein;(source:Araport11) Ipc09G0012840 AT3G26350.1 0 0 proline-rich receptor-like kinase;(source:Araport11) Ipc09G0012830 AT4G24740.1 FUS3-complementing gene 2 a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. LAMMER-type protein kinase AFC2;(source:Araport11) Ipc09G0012820 AT5G40580.2 20S proteasome beta subunit PBB2 Encodes 20S proteasome beta subunit PBB2 (PBB2). 20S proteasome beta subunit PBB2;(source:Araport11) Ipc09G0012810 AT3G28345.1 ABC transporter family protein Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem. ABC transporter family protein;(source:Araport11) Ipc09G0012800 AT1G67790.1 0 0 sieve element occlusion protein;(source:Araport11) Ipc09G0012790 AT1G13190.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc09G0012780 #N/A #N/A #N/A #N/A Ipc09G0012770 AT1G13180.1 Actin-like ATPase superfamily protein Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype. Actin-like ATPase superfamily protein;(source:Araport11) Ipc09G0012760 AT1G13160.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc09G0012750 AT3G26120.1 terminal EAR1-like 1 Similar to terminal ear1 in Zea mays. A member of mei2-like gene family; phylogenetic analysis revealed that TEL1 belongs to the third clade of mei2-like proteins (TEL clade), with conserved two N-terminal RNA recognition motifs (RRM), in addition to the C-terminal RRM, shared among all mei2-like proteins. terminal EAR1-like 1;(source:Araport11) Ipc09G0012740 AT4G39280.1 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative 0 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase;(source:Araport11) Ipc09G0012730 AT5G50260.1 Cysteine proteinases superfamily protein Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.CEP1 is expressed specifically in the tapetum from stages 5 to 11 of anther development. The CEP1 protein first appears as a proenzyme in precursor protease vesicles, and is then transported to the vacuole and transformed into the mature enzyme before rupture of the vacuole. CEP1 was also released to the tapetal cell wall during late stage 6 and stage 7. After the tapetal cell wall degenerated, the CEP1 enzyme entered the callose wall from the degenerated tapetal cell wall and was probably involved in degeneration of the callose wall. Cysteine proteinases superfamily protein;(source:Araport11) Ipc09G0012720 AT1G67785.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0012710 AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc06G0000440 AT1G42700.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0000430 AT3G03990.1 alpha/beta-Hydrolases superfamily protein Encodes an alpha/beta hydrolase essential for strigolactone signaling. Degradation of the protein is promoted by strigolactone. The mRNA is cell-to-cell mobile. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc06G0000410 AT3G20550.1 SMAD/FHA domain-containing protein Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL. SMAD/FHA domain-containing protein;(source:Araport11) Ipc06G0000420 AT1G65930.1 cytosolic NADP+-dependent isocitrate dehydrogenase Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses. The mRNA is cell-to-cell mobile. cytosolic NADP+-dependent isocitrate dehydrogenase;(source:Araport11) Ipc06G0000400 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc11G0007210 AT1G64290.1 F-box protein-related 0 F-box protein-like protein;(source:Araport11) Ipc11G0007220 AT1G05830.4 0 Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1. trithorax-like protein 2;(source:Araport11) Ipc11G0007230 AT3G09040.3 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc11G0007240 AT1G64295.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc11G0007250 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc11G0007260 AT1G64290.1 F-box protein-related 0 F-box protein-like protein;(source:Araport11) Ipc11G0007270 AT5G27820.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc11G0007280 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc11G0007290 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc05G0024520 AT5G01015.1 0 0 transmembrane protein;(source:Araport11) Ipc05G0024530 AT5G01980.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0024540 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc05G0024550 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc05G0024560 #N/A #N/A #N/A #N/A Ipc05G0024570 AT5G01980.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc07G0000450 AT1G51520.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc07G0000460 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc07G0000470 AT5G52230.3 0 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain protein 13;(source:Araport11) Ipc04G0002320 AT3G21580.1 cobalt ion transmembrane transporters 0 cobalt ion transmembrane transporter;(source:Araport11) Ipc04G0002330 AT5G18950.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc04G0002340 AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc04G0002350 AT5G18940.1 Mo25 family protein 0 Mo25 family protein;(source:Araport11) Ipc04G0002360 AT3G30842.1 pleiotropic drug resistance 10 0 pleiotropic drug resistance 10;(source:Araport11) Ipc04G0002370 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc04G0002380 AT2G20790.1 clathrin adaptor complexes medium subunit family protein 0 clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc04G0002390 AT3G59990.4 methionine aminopeptidase 2B Encodes a MAP2 like methionine aminopeptidase methionine aminopeptidase 2B;(source:Araport11) Ipc04G0002400 AT3G06270.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc04G0002410 AT3G06290.2 0 Encodes a component of the conserved TREX-2 complex that couples mRNA transcription with nucleo-cytoplasmic export, that is required for prevention of epigenetic gene silencing and has additional roles in regulating siRNAs and DNA methylation. SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11) Ipc04G0002420 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc04G0002430 AT4G11320.2 0 0 Papain family cysteine protease;(source:Araport11) Ipc04G0002440 AT4G21860.4 0 0 methionine sulfoxide reductase B 2;(source:Araport11) Ipc04G0002450 AT4G03000.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc04G0002460 AT5G18900.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc04G0002470 AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b), AT5G04280 (AtRZ-1c). It also, along with AtRZ-1c, plays important roles in plant development, pre- mRNA splicing, and general gene expression. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc11G0006350 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc11G0006360 AT5G56760.1 serine acetyltransferase 1;1 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. serine acetyltransferase 1;(source:Araport11) Ipc14G0000910 #N/A #N/A #N/A #N/A Ipc14G0000900 AT1G40087.1 Plant transposase (Ptta/En/Spm family) 0 Plant transposase (Ptta/En/Spm family);(source:Araport11) Ipc08G0000010 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0000020 AT3G22490.1 Seed maturation protein Atrab28 plays a role in the ion cell balance during late embryogenesis and germination. Seed maturation protein;(source:Araport11) Ipc08G0000030 AT1G21790.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11) Ipc08G0000040 AT1G54490.1 exoribonuclease 4 Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing. The mRNA is cell-to-cell mobile. exoribonuclease 4;(source:Araport11) Ipc08G0000050 AT1G54520.1 0 FLAP1 is a chloroplast membrane protein of unknown function. When grown in variable light mutants have reduced chloroplast number and size. NPQ is increased relative to wild type under low light. myelin-associated oligodendrocyte basic protein;(source:Araport11) Ipc08G0000070 AT2G24830.1 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein 0 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein;(source:Araport11) Ipc08G0000060 AT5G40970.1 Protein of unknown function (DUF 3339) 0 hypothetical protein (DUF 3339);(source:Araport11) Ipc08G0000080 AT1G08940.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc08G0000090 AT3G05170.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc08G0000100 AT4G31180.2 Class II aminoacyl-tRNA and biotin synthetases superfamily protein The IBI1 gene encodes an aspartyl tRNA synthetase (AspRS). In addition, the IBI1 protein acts as a receptor protein of the chemical plant defence activator beta-aminobutyric acid (BABA). Binding of IBI1 to the active R-enantiomer of BABA primes non-canonical defence activity of the AspRS protein against pathogen attack. Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11) Ipc08G0000110 AT1G54730.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0000120 AT1G54710.1 homolog of yeast autophagy 18 (ATG18) H 0 autophagy 18h-like protein;(source:Araport11) Ipc08G0000130 AT5G27330.1 Prefoldin chaperone subunit family protein 0 Prefoldin chaperone subunit family protein;(source:Araport11) Ipc08G0000140 AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein threonine synthase Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc08G0000150 AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein threonine synthase Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc08G0000160 AT1G79500.4 Aldolase-type TIM barrel family protein Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II. Aldolase-type TIM barrel family protein;(source:Araport11) Ipc08G0000170 AT2G02040.1 peptide transporter 2 Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. peptide transporter 2;(source:Araport11) Ipc08G0000180 AT4G08630.2 0 0 fas-binding factor-like protein;(source:Araport11) Ipc08G0000190 AT3G05000.1 Transport protein particle (TRAPP) component Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. Transport protein particle (TRAPP) component;(source:Araport11) Ipc08G0000200 AT3G58130.2 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein 0 N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein;(source:Araport11) Ipc08G0000210 AT3G05010.1 Protein of unknown function, transmembrane-40 Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. Protein of unknown function, transmembrane-40;(source:Araport11) Ipc08G0000220 AT1G54630.1 acyl carrier protein 3 encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light. acyl carrier protein 3;(source:Araport11) Ipc08G0000230 AT1G08820.5 0 Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. vamp/synaptobrevin-associated protein 27-2;(source:Araport11) Ipc08G0000240 AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein Encodes a nuclear CRM protein required for the processing of many mitochondrial introns. It is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis. RNA-binding CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11) Ipc08G0000250 AT3G05040.1 ARM repeat superfamily protein Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species. ARM repeat superfamily protein;(source:Araport11) Ipc08G0000260 AT5G56940.1 Ribosomal protein S16 family protein 0 Ribosomal protein S16 family protein;(source:Araport11) Ipc08G0000270 AT3G62140.1 0 0 NEFA-interacting nuclear protein;(source:Araport11) Ipc08G0000280 AT1G54570.1 Esterase/lipase/thioesterase family protein Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence. Esterase/lipase/thioesterase family protein;(source:Araport11) Ipc08G0000290 AT3G05090.3 0 Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1?Cul4?mediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0000300 AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0000310 AT1G08720.1 Protein kinase superfamily protein enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum The mRNA is cell-to-cell mobile. Protein kinase superfamily protein;(source:Araport11) Ipc08G0000320 AT5G45680.1 FK506-binding protein 13 Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen The mRNA is cell-to-cell mobile. FK506-binding protein 13;(source:Araport11) Ipc08G0000330 AT3G05340.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0000340 AT5G48600.1 structural maintenance of chromosome 3 member of SMC subfamily structural maintenance of chromosome 3;(source:Araport11) Ipc08G0000350 AT1G54940.1 plant glycogenin-like starch initiation protein 4 Encodes a xylan glucuronosyltransferase. plant glycogenin-like starch initiation protein 4;(source:Araport11) Ipc08G0000360 AT4G31540.1 exocyst subunit exo70 family protein G1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. exocyst subunit exo70 family protein G1;(source:Araport11) Ipc08G0000370 AT1G78570.1 rhamnose biosynthesis 1 Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in E. coli. rhamnose biosynthesis 1;(source:Araport11) Ipc08G0000380 AT4G31580.2 serine/arginine-rich 22 Encodes a Serine/arginine-rich (SR) protein RSZp22. SR proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. RSZp22 is located in the nucleolus. It is a nucleocytoplasmic shuttling protein and an interacting partner to the Arabidopsis U1-70K. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. serine/arginine-rich 22;(source:Araport11) Ipc08G0000390 AT5G19940.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc08G0000400 AT5G26220.1 ChaC-like family protein 0 ChaC-like family protein;(source:Araport11) Ipc08G0000410 AT5G10620.2 0 0 methyltransferase;(source:Araport11) Ipc08G0000420 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc08G0000430 AT2G24370.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc08G0000440 AT4G16130.1 arabinose kinase Similar to galactokinase. arabinose kinase;(source:Araport11) Ipc08G0000450 AT3G16890.1 pentatricopeptide (PPR) domain protein 40 Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase). pentatricopeptide (PPR) domain protein 40;(source:Araport11) Ipc08G0000460 AT2G24390.1 AIG2-like (avirulence induced gene) family protein 0 AIG2-like (avirulence induced gene) family protein;(source:Araport11) Ipc08G0000470 AT3G23070.1 CRM family member 3A Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts. CRM family member 3A;(source:Araport11) Ipc08G0000480 AT5G24850.1 cryptochrome 3 Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome. cryptochrome 3;(source:Araport11) Ipc08G0000490 AT5G24810.1 ABC1 family protein 0 ABC1 family protein;(source:Araport11) Ipc08G0000500 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc08G0000510 AT2G24430.2 NAC domain containing protein 38 0 NAC domain containing protein 38;(source:Araport11) Ipc08G0000520 AT4G31130.1 Protein of unknown function (DUF1218) 0 keratin-associated protein (DUF1218);(source:Araport11) Ipc08G0000530 AT3G63420.2 Ggamma-subunit 1 heterotrimeric G protein gamma-subunit (AGG1) mRNA, Ggamma-subunit 1;(source:Araport11) Ipc08G0000540 AT1G14590.1 Nucleotide-diphospho-sugar transferase family protein 0 Nucleotide-diphospho-sugar transferase family protein;(source:Araport11) Ipc08G0000550 AT3G54280.1 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases 0 ROOT GROWTH DEFECTIVE 3;(source:Araport11) Ipc08G0000560 AT3G18960.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc08G0000570 AT5G07840.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc08G0000580 AT2G38250.1 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc08G0000600 AT3G12220.3 0 0 serine carboxypeptidase-like 16;(source:Araport11) Ipc08G0000590 AT5G36180.5 0 0 serine carboxypeptidase-like 1;(source:Araport11) Ipc08G0000610 AT5G09640.1 serine carboxypeptidase-like 19 encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase. serine carboxypeptidase-like 19;(source:Araport11) Ipc08G0000620 AT5G42210.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0000630 AT4G35790.1 phospholipase D delta Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death. phospholipase D delta;(source:Araport11) Ipc08G0000640 AT1G76100.1 plastocyanin 1 One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis. plastocyanin 1;(source:Araport11) Ipc08G0000650 AT5G27280.1 Zim17-type zinc finger protein 0 Zim17-type zinc finger protein;(source:Araport11) Ipc08G0000660 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc08G0000670 AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc08G0000680 AT4G13970.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc08G0000690 AT4G16195.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc08G0000700 AT3G17080.1 Plant self-incompatibility protein S1 family 0 Plant self-incompatibility protein S1 family;(source:Araport11) Ipc08G0000710 AT1G20430.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0000720 AT1G76150.1 enoyl-CoA hydratase 2 Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves. enoyl-CoA hydratase 2;(source:Araport11) Ipc08G0000740 AT1G20370.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc08G0000730 AT1G76120.2 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc08G0000750 AT1G76120.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc08G0000760 AT2G17030.1 F-box family protein with a domain of unknown function (DUF295) Encodes a SKP1/ASK-interacting protein. F-box SKIP23-like protein (DUF295);(source:Araport11) Ipc08G0000770 AT1G76200.1 0 0 NADH dehydrogenase ubiquinone 1 beta subcomplex subunit;(source:Araport11) Ipc08G0000780 AT5G42310.1 Pentatricopeptide repeat (PPR-like) superfamily protein Encodes a member of the Arabidopsis PPR family, expressed in the chloroplast, that acts as a regulator of chloroplast protein synthesis, interacts with the petB-petD intergenic region, and is required for the generation of petB and petD monocistronic RNAs. Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc08G0000790 AT1G42440.1 0 0 pre-rRNA-processing TSR1-like protein;(source:Araport11) Ipc08G0000800 AT1G63610.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0000810 AT1G76270.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc03G0000680 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc03G0000670 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0000660 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc03G0000650 AT5G07290.1 MEI2-like 4 AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like 4;(source:Araport11) Ipc03G0000640 AT5G08710.1 Regulator of chromosome condensation (RCC1) family protein 0 Regulator of chromosome condensation (RCC1) family protein;(source:Araport11) Ipc03G0000630 AT5G08750.7 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc03G0000620 AT3G20070.4 0 Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information. titan9;(source:Araport11) Ipc15G0014630 AT4G32930.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0014620 AT1G55803.1 0 0 ferredoxin-fold anticodon-binding domain protein;(source:Araport11) Ipc15G0014610 AT5G61060.1 histone deacetylase 5 Encodes a member of the histone deacetylase family. histone deacetylase 5;(source:Araport11) Ipc15G0014600 AT1G21720.1 proteasome beta subunit C1 20S proteasome beta subunit PBC1 truncated protein (PBC1) proteasome beta subunit C1;(source:Araport11) Ipc15G0014590 AT5G11730.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc15G0014580 AT1G55340.1 Protein of unknown function (DUF1639) 0 hypothetical protein (DUF1639);(source:Araport11) Ipc15G0014570 AT5G26010.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc15G0014560 #N/A #N/A #N/A #N/A Ipc15G0014550 AT5G51700.1 protein binding;zinc ion binding Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation. cysteine and histidine-rich domain-containing protein RAR1;(source:Araport11) Ipc15G0014540 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0014530 AT2G43700.5 0 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc15G0014520 AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial 0 NADH-ubiquinone oxidoreductase 20 kDa subunit;(source:Araport11) Ipc06G0000390 AT1G04990.6 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc03G0026320 AT1G22460.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc06G0016890 AT2G26870.1 non-specific phospholipase C2 0 non-specific phospholipase C2;(source:Araport11) Ipc06G0016880 #N/A #N/A #N/A #N/A Ipc06G0016870 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0016860 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0007190 AT4G36920.2 Integrase-type DNA-binding superfamily protein Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc05G0007180 AT5G23590.2 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc05G0007170 AT4G34090.1 0 0 cyclin delta-3;(source:Araport11) Ipc05G0007160 AT2G23380.1 SET domain-containing protein Similar to the product of the Polycomb-group gene Enhancer of zeste. Catalytic component of the PRC2 complex.Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant. SET domain-containing protein;(source:Araport11) Ipc05G0007140 AT4G34050.3 0 Methyltransferase in the lignin biosynthetic pathway. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0007150 AT4G34050.3 0 Methyltransferase in the lignin biosynthetic pathway. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc05G0007130 AT4G34040.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0007120 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc05G0007110 AT5G42940.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc05G0007100 AT4G36930.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0007090 AT1G45688.1 0 CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress. transmembrane protein;(source:Araport11) Ipc05G0007080 AT4G36950.1 mitogen-activated protein kinase kinase kinase 21 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21;(source:Araport11) Ipc05G0007070 AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc05G0007060 AT5G42930.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc05G0007050 AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc05G0007040 AT1G45207.3 0 0 Remorin family protein;(source:Araport11) Ipc05G0007030 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0007020 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0007010 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc05G0007000 AT5G67020.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0006990 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc05G0006980 AT1G54350.1 ABC transporter family protein 0 ABC transporter family protein;(source:Araport11) Ipc05G0006970 AT5G14510.1 ARM repeat superfamily protein Armadillo (ARM) repeat containing protein involved in vascular development. ARM repeat superfamily protein;(source:Araport11) Ipc05G0006960 AT4G37000.1 accelerated cell death 2 (ACD2) Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae. accelerated cell death 2 (ACD2);(source:Araport11) Ipc05G0006950 AT5G66800.1 0 0 membrane-associated kinase regulator-like protein;(source:Araport11) Ipc05G0006940 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc05G0006930 AT5G66810.1 0 0 Ran-binding protein in the microtubule-organising centre protein;(source:Araport11) Ipc05G0006920 AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc05G0006910 AT4G37080.3 Protein of unknown function, DUF547 0 ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547);(source:Araport11) Ipc05G0006900 AT3G50560.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc05G0006890 AT3G50530.1 CDPK-related kinase CDPK-related kinase CDPK-related kinase;(source:Araport11) Ipc05G0006880 AT5G66850.2 0 Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens. mitogen-activated protein kinase kinase kinase 5;(source:Araport11) Ipc05G0006870 AT5G66870.1 ASYMMETRIC LEAVES 2-like 1 Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination. ASYMMETRIC LEAVES 2-like 1;(source:Araport11) Ipc05G0006860 AT4G37180.1 Homeodomain-like superfamily protein UIF1 is a nuclear and cytoplasmically localized myb-domain containing member of the GARP G2-like subfamily of transcription factors. Interacts with ULT1 and binds to the WUS promoter. UIF1 binding domains are also found in CUC and AG promoters suggesting they are also direct targets. This locus was also identified as a putative cytoskeletal protein in a yeast screen. Homeodomain-like superfamily protein;(source:Araport11) IpcGene40314 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc07G0001470 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc02G0006330 AT2G35550.1 basic pentacysteine 7 0 basic pentacysteine 7;(source:Araport11) Ipc02G0006320 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc02G0006310 AT1G67230.1 little nuclei1 Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5. little nuclei1;(source:Araport11) Ipc06G0017930 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0006280 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0009930 AT3G58620.1 tetratricopetide-repeat thioredoxin-like 4 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. tetratricopetide-repeat thioredoxin-like 4;(source:Araport11) Ipc14G0009940 #N/A #N/A #N/A #N/A Ipc14G0009950 AT4G38960.4 0 BBX19 is a B-box containing transcriptional regulator involved in photomporphogenesis and flowering. B-box type zinc finger family protein;(source:Araport11) Ipc14G0009960 AT4G11911.1 0 0 STAY-GREEN-like protein;(source:Araport11) Ipc14G0009970 AT5G49620.1 myb domain protein 78 Member of the R2R3 factor gene family. myb domain protein 78;(source:Araport11) Ipc14G0009980 AT3G17205.3 ubiquitin protein ligase 6 0 ubiquitin protein ligase 6;(source:Araport11) Ipc14G0009990 AT5G49930.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc14G0010000 AT3G17210.2 0 Encodes a heat stable protein with antimicrobial and antifungal activity. heat stable protein 1;(source:Araport11) Ipc14G0010010 AT3G17210.2 0 Encodes a heat stable protein with antimicrobial and antifungal activity. heat stable protein 1;(source:Araport11) Ipc14G0010020 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc14G0010030 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc14G0010040 AT3G17220.1 pectin methylesterase inhibitor 2 Pectin methylesterase inhibitor AtPMEI2. Inactivates AtPPME1 in vitro. Localized to Brefeldin A-induced compartments, and was found in FYVE-induced endosomal aggregates. pectin methylesterase inhibitor 2;(source:Araport11) Ipc14G0010050 AT1G48030.5 0 Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light. mitochondrial lipoamide dehydrogenase 1;(source:Araport11) Ipc14G0010060 AT4G23240.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 16 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 16;(source:Araport11) Ipc14G0010070 AT3G62260.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc14G0010080 AT3G06440.1 Galactosyltransferase family protein Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced root hair growth and reduced seed coat mucilage. Galactosyltransferase family protein;(source:Araport11) Ipc14G0010090 AT1G48110.2 evolutionarily conserved C-terminal region 7 0 evolutionarily conserved C-terminal region 7;(source:Araport11) Ipc14G0010100 AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein 0 Ribosomal protein S27a / Ubiquitin family protein;(source:Araport11) Ipc14G0010110 AT3G17365.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc14G0010120 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc14G0010130 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc14G0010140 AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc14G0010150 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc14G0010160 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc14G0010170 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc14G0010180 AT1G02500.2 S-adenosylmethionine synthetase 1 encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity. S-adenosylmethionine synthetase 1;(source:Araport11) Ipc14G0010190 AT3G06430.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes PPR2, a pentatricopeptide repeat protein. Binds to plastid 23S rRNA and plays an important role in the first mitotic division during gametogenesis and in cell proliferation during embryogenesis. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0010200 AT3G60030.1 squamosa promoter-binding protein-like 12 0 squamosa promoter-binding protein-like 12;(source:Araport11) Ipc14G0010210 AT3G45880.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0010220 AT3G17410.2 0 Positively regulates ABA-mediated physiological responses via phosphorylation on RCAR3/ RCAR11. Protein kinase superfamily protein;(source:Araport11) Ipc14G0010230 AT3G17440.1 novel plant snare 13 member of NPSN Gene Family Putative plant snare 13;(source:Araport11) Ipc14G0010240 AT3G06483.1 pyruvate dehydrogenase kinase Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1α subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily. pyruvate dehydrogenase kinase;(source:Araport11) Ipc14G0010250 AT5G30495.2 Fcf2 pre-rRNA processing protein 0 Fcf2 pre-rRNA processing protein;(source:Araport11) Ipc14G0010260 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc14G0010270 AT3G17465.1 ribosomal protein L3 plastid encodes a putative L3 ribosomal protein targeted to the plastid. ribosomal protein L3 plastid;(source:Araport11) Ipc14G0010280 AT3G17510.1 CBL-interacting protein kinase 1 Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2. CBL-interacting protein kinase 1;(source:Araport11) Ipc14G0010290 AT4G36600.2 0 0 Late embryogenesis abundant (LEA) protein;(source:Araport11) Ipc14G0010300 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc14G0010310 AT3G06950.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc14G0010320 AT3G06960.1 pigment defective 320 TGD4 is an integral dimeric beta-barrel lipid transfer protein that binds PtdOH with its N-terminus and contains dimerization domains at its C-terminus. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. pigment defective 320;(source:Araport11) Ipc14G0010330 AT5G11680.1 0 0 classical AGP protein;(source:Araport11) Ipc14G0010340 AT4G38040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc14G0010350 AT5G47870.1 0 0 cobalt ion-binding protein;(source:Araport11) Ipc14G0010360 AT2G19640.2 ASH1-related protein 2 0 ASH1-related protein 2;(source:Araport11) Ipc14G0010370 AT5G43260.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc14G0010380 AT3G61470.1 photosystem I light harvesting complex gene 2 Encodes a component of the light harvesting antenna complex of photosystem I. The mRNA is cell-to-cell mobile. photosystem I light harvesting complex protein;(source:Araport11) Ipc14G0010390 AT1G07590.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc14G0010400 AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger 0 HCP-like superfamily protein with MYND-type zinc finger;(source:Araport11) Ipc14G0010410 AT1G67350.2 0 0 NADH-ubiquinone oxidoreductase;(source:Araport11) Ipc14G0010420 AT5G43270.3 squamosa promoter binding protein-like 2 member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. squamosa promoter binding protein-like 2;(source:Araport11) Ipc14G0010430 AT1G27340.1 Galactose oxidase/kelch repeat superfamily protein Encodes a putative F-box protein that is involved in the regulation of leaf morphology. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc14G0010440 AT1G27350.1 Ribosome associated membrane protein RAMP4 0 Ribosome associated membrane protein RAMP4;(source:Araport11) Ipc02G0000660 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc02G0000670 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0000030 AT2G34030.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc10G0000020 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0000010 AT1G61000.1 0 0 kinetochore protein;(source:Araport11) Ipc04G0006360 AT5G45550.1 Mob1/phocein family protein Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling. Mob1/phocein family protein;(source:Araport11) Ipc04G0006350 AT5G11000.1 Plant protein of unknown function (DUF868) 0 hypothetical protein (DUF868);(source:Araport11) Ipc04G0006340 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006330 #N/A #N/A #N/A #N/A Ipc04G0006320 AT3G14610.1 cytochrome P450, family 72, subfamily A, polypeptide 7 putative cytochrome P450 cytochrome P450, family 72, subfamily A, polypeptide 7;(source:Araport11) Ipc04G0006310 AT3G25270.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc04G0006300 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006290 AT4G19410.1 Pectinacetylesterase family protein 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006280 AT5G24900.2 0 Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs. cytochrome P450, family 714, subfamily A, polypeptide 2;(source:Araport11) Ipc04G0006270 AT3G09405.2 0 0 Pectinacetylesterase family protein;(source:Araport11) Ipc04G0006260 AT3G29770.1 methyl esterase 11 Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. methyl esterase 11;(source:Araport11) Ipc04G0006250 AT2G34500.1 cytochrome P450, family 710, subfamily A, polypeptide 1 Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2). cytochrome P450, family 710, subfamily A, polypeptide 1;(source:Araport11) Ipc04G0006240 AT1G29990.1 prefoldin 6 Encodes a cytoplastic protein with similarity to yeast prefoldin6, a subunit of the prefoldin complex. The PFD complex is thought to function along with the TCP ring complex to properly fold microtubule proteins. prefoldin 6;(source:Araport11) Ipc04G0006230 AT1G30000.1 alpha-mannosidase 3 0 alpha-mannosidase 3;(source:Araport11) Ipc04G0006220 AT4G03740.1 0 0 hypothetical protein;(source:Araport11) Ipc04G0006210 AT3G12680.1 floral homeotic protein (HUA1) Member of the floral homeotic AGAMOUS pathway. floral homeotic protein (HUA1);(source:Araport11) Ipc04G0006200 AT5G46230.1 Protein of unknown function, DUF538 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc04G0006190 AT5G46220.1 Protein of unknown function (DUF616) Encodes a protein with alkaline ceramidase activity that is involved in regulation of turgor during pollen tube growth and silique stomatal movement. Tod1 is expressed specifically in pollen and silique guard cells. Loss of function mutations have reduced fertility due to defects in pollen transmission. transmembrane protein (DUF616);(source:Araport11) Ipc04G0006180 AT1G30040.1 gibberellin 2-oxidase Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. gibberellin 2-oxidase;(source:Araport11) Ipc04G0006170 AT2G36010.3 E2F transcription factor 3 Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. E2F transcription factor 3;(source:Araport11) Ipc04G0006160 AT2G34560.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc04G0006150 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc04G0006140 AT1G30070.1 SGS domain-containing protein 0 SGS domain-containing protein;(source:Araport11) Ipc04G0006130 AT5G46210.1 cullin4 Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. cullin4;(source:Araport11) Ipc04G0006120 AT1G30090.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc10G0000150 AT5G27220.4 0 0 Frigida-like protein;(source:Araport11) Ipc10G0000160 AT3G07270.1 GTP cyclohydrolase I 0 GTP cyclohydrolase I;(source:Araport11) Ipc10G0000170 AT4G13020.1 Protein kinase superfamily protein Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis. Protein kinase superfamily protein;(source:Araport11) Ipc10G0000180 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0000190 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0000200 AT4G13010.1 Oxidoreductase, zinc-binding dehydrogenase family protein 0 Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11) Ipc10G0000210 AT3G25230.1 rotamase FKBP 1 Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. rotamase FKBP 1;(source:Araport11) Ipc10G0000220 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc10G0000230 AT3G25230.2 rotamase FKBP 1 Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. rotamase FKBP 1;(source:Araport11) Ipc10G0000240 AT5G59240.1 Ribosomal protein S8e family protein 0 Ribosomal protein S8e family protein;(source:Araport11) Ipc10G0000250 AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0000260 AT3G22690.2 0 YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation. LOW protein: PPR containing-like protein;(source:Araport11) Ipc10G0000270 AT1G63980.2 D111/G-patch domain-containing protein 0 D111/G-patch domain-containing protein;(source:Araport11) Ipc10G0000280 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0000290 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0023120 AT4G37790.1 Homeobox-leucine zipper protein family Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile. Homeobox-leucine zipper protein family;(source:Araport11) Ipc03G0023110 AT5G65740.2 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc03G0023100 AT5G65730.1 xyloglucan endotransglucosylase/hydrolase 6 0 xyloglucan endotransglucosylase/hydrolase 6;(source:Araport11) Ipc03G0023090 AT4G37810.1 0 0 EPIDERMAL PATTERNING FACTOR-like protein;(source:Araport11) Ipc03G0023080 AT5G65720.3 0 Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin). nitrogen fixation S (NIFS)-like 1;(source:Araport11) Ipc03G0023070 AT4G37830.1 cytochrome c oxidase-related 0 cytochrome c oxidase-like protein;(source:Araport11) Ipc03G0023060 AT1G50010.1 tubulin alpha-2 chain Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. The mRNA is cell-to-cell mobile. tubulin alpha-2 chain;(source:Araport11) Ipc03G0023050 AT5G65700.2 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc03G0023040 AT4G37840.1 hexokinase-like 3 Encodes a putative hexokinase. hexokinase-like 3;(source:Araport11) Ipc03G0023030 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc03G0023020 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc03G0023010 AT3G04840.1 Ribosomal protein S3Ae 0 Ribosomal protein S3Ae;(source:Araport11) Ipc03G0023000 AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc03G0022990 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc03G0022980 AT5G65685.2 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc03G0022970 AT1G67630.1 DNA polymerase alpha 2 0 DNA polymerase alpha 2;(source:Araport11) Ipc03G0022960 AT4G37880.1 LisH/CRA/RING-U-box domains-containing protein 0 LisH/CRA/RING-U-box domains-containing protein;(source:Araport11) Ipc03G0022950 AT5G49665.1 Zinc finger (C3HC4-type RING finger) family protein 0 Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc03G0022940 AT5G65670.2 indole-3-acetic acid inducible 9 auxin (indole-3-acetic acid) induced gene The mRNA is cell-to-cell mobile. indole-3-acetic acid inducible 9;(source:Araport11) Ipc03G0022930 AT4G31600.1 UDP-N-acetylglucosamine (UAA) transporter family Encodes a Golgi-localized UDP–glucose/UDP–galactose transporter that affects lateral root emergence. UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11) Ipc03G0022920 AT3G51910.1 heat shock transcription factor A7A member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile. heat shock transcription factor A7A;(source:Araport11) Ipc03G0022910 AT5G65660.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc03G0022900 AT3G53440.2 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc03G0022890 AT5G65640.1 beta HLH protein 93 bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages. beta HLH protein 93;(source:Araport11) Ipc03G0022880 AT5G09620.2 0 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc03G0022870 AT2G22660.2 Protein of unknown function (duplicated DUF1399) Encodes a member of a family of DUF1399 domain containing proteins. GRDP1 is involved in germination and response to ABA. Loss of function mutants have reduced germination in the presence of osmotic stressors. DNA-binding protein, putative (duplicated DUF1399);(source:Araport11) Ipc03G0022860 AT4G37920.1 0 0 endoribonuclease E-like protein;(source:Araport11) Ipc03G0022850 AT2G22640.1 BRICK1, putative Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Required for accumulation of SCAR1 protein in vivo. Selectively stabilizes SCAR2. BRICK1;(source:Araport11) Ipc03G0022840 AT4G37930.1 serine transhydroxymethyltransferase 1 Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants. serine transhydroxymethyltransferase 1;(source:Araport11) Ipc04G0001750 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0000310 AT2G32840.1 proline-rich family protein 0 proline-rich family protein;(source:Araport11) Ipc14G0018500 ATMG00180.1 cytochrome C biogenesis 452 cytochrome c biogenesis orf452 cytochrome C biogenesis 452;(source:Araport11) Ipc14G0018480 #N/A #N/A #N/A #N/A Ipc14G0019560 AT1G70500.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0018460 ATMG00180.1 cytochrome C biogenesis 452 cytochrome c biogenesis orf452 cytochrome C biogenesis 452;(source:Araport11) Ipc14G0019550 ATMG00510.1 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7;(source:Araport11) Ipc14G0019520 #N/A #N/A #N/A #N/A Ipc14G0019500 AT2G07771.2 Cytochrome C assembly protein 0 Cytochrome C assembly protein;(source:Araport11) Ipc14G0019450 AT1G14380.4 0 Encodes a microtubule-associated protein. IQ-domain 28;(source:Araport11) Ipc14G0019470 AT3G47820.1 PLANT U-BOX 39 0 PLANT U-BOX 39;(source:Araport11) Ipc14G0019690 ATMG00570.1 Sec-independent periplasmic protein translocase encodes a protein of unknown function. The transcript has extensive RNA editing at the 3' end. Protein has orthologous in other plants and sequence is similar to E. coli ORFs orf154 and orf131, both of unknown function. So far, similar proteins are found only in plants and prokaryotes. Sec-independent periplasmic protein translocase;(source:Araport11) Ipc14G0019660 AT1G06950.1 translocon at the inner envelope membrane of chloroplasts 110 Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis. C-terminal half of Tic110 functions as scaffolds for protein-protein interactions. translocon at the inner envelope membrane of chloroplasts 110;(source:Araport11) Ipc14G0019680 AT5G64170.3 0 LNK1 is a member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex.Functions as a transcriptional coactivator. dentin sialophosphoprotein-like protein;(source:Araport11) Ipc14G0018570 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) Ipc14G0019630 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0019540 ATMG00510.1 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7;(source:Araport11) Ipc14G0019530 #N/A #N/A #N/A #N/A Ipc14G0019510 AT2G07771.2 Cytochrome C assembly protein 0 Cytochrome C assembly protein;(source:Araport11) Ipc14G0019460 AT1G14380.4 0 Encodes a microtubule-associated protein. IQ-domain 28;(source:Araport11) Ipc14G0019490 AT1G77750.1 Ribosomal protein S13/S18 family 0 Ribosomal protein S13/S18 family;(source:Araport11) Ipc14G0019480 AT3G47820.1 PLANT U-BOX 39 0 PLANT U-BOX 39;(source:Araport11) Ipc14G0019620 AT1G54440.4 0 Rrp6-like protein, controls RNA-directed DNA methylation by helping with the retention of noncoding RNAs in normal cells. Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11) Ipc14G0019610 AT4G02900.1 ERD (early-responsive to dehydration stress) family protein 0 ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc14G0019600 AT3G47890.2 0 0 Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11) Ipc14G0018450 AT1G68990.2 male gametophyte defective 3 MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development. male gametophyte defective 3;(source:Araport11) Ipc14G0019580 AT1G10980.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc09G0004400 AT1G53430.2 Leucine-rich repeat transmembrane protein kinase 0 Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc09G0004410 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0000890 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc05G0025270 AT5G39600.1 0 0 39S ribosomal protein;(source:Araport11) Ipc05G0025260 AT3G28640.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc05G0025250 AT5G22110.2 0 Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions. DNA polymerase epsilon subunit B2;(source:Araport11) Ipc05G0025240 AT3G25220.1 FK506-binding protein 15 kD-1 immunophilin (FKBP15-1) FK506-binding protein 15 kD-1;(source:Araport11) Ipc05G0025230 AT3G02100.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc05G0025220 AT3G12345.1 0 0 FKBP-type peptidyl-prolyl cis-trans isomerase;(source:Araport11) Ipc05G0025210 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0000660 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc07G0000670 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc07G0000680 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc04G0001770 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc04G0001760 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0017130 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0017140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc14G0018860 AT5G59680.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc14G0018850 ATMG00520.1 Intron maturase, type II family protein 0 Intron maturase, type II family protein;(source:Araport11) Ipc14G0018830 AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal 0 cytochrome b;(source:Araport11) Ipc14G0018840 AT2G07725.1 Ribosomal L5P family protein 0 Ribosomal L5P family protein;(source:Araport11) Ipc14G0018820 ATMG00070.1 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9;(source:Araport11) Ipc14G0018790 AT2G07698.1 ATPase, F1 complex, alpha subunit protein 0 ATPase, F1 complex, alpha subunit protein;(source:Araport11) Ipc14G0018760 AT2G41790.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc14G0018810 AT5G44940.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc14G0018800 ATMG01190.1 ATP synthase subunit 1 ATPase subunit 1 ATP synthase subunit 1;(source:Araport11) Ipc14G0018780 AT4G25310.2 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc14G0018770 AT2G41790.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc14G0018750 AT5G44940.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc14G0018740 AT5G02240.1 NAD(P)-binding Rossmann-fold superfamily protein Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc14G0018730 ATMG00160.1 cytochrome oxidase 2 cytochrome c oxidase subunit 2 cytochrome oxidase 2;(source:Araport11) Ipc14G0018720 ATMG00110.1 cytochrome C biogenesis 206 Encodes a mitochondria-encoded cytochrome c biogenesis protein. cytochrome C biogenesis 206;(source:Araport11) Ipc14G0018690 AT1G62830.1 LSD1-like 1 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1;(source:Araport11) Ipc14G0018610 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc14G0018620 ATMG01360.1 cytochrome oxidase cytochrome c oxidase subunit 1 cytochrome oxidase;(source:Araport11) Ipc14G0018600 AT2G07741.1 ATPase, F0 complex, subunit A protein 0 ATPase, F0 complex, subunit A protein;(source:Araport11) Ipc14G0018590 ATCG00480.1 ATP synthase subunit beta chloroplast-encoded gene for beta subunit of ATP synthase ATP synthase subunit beta;(source:Araport11) Ipc12G0005900 AT5G24260.5 0 0 prolyl oligopeptidase family protein;(source:Araport11) Ipc12G0005890 AT5G22470.1 NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases PARP3 is one of three canonical PARPs in Arabidopsis. poly ADP-ribose polymerase 3;(source:Araport11) Ipc14G0005130 AT5G57780.1 0 Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors. transcription factor;(source:Araport11) Ipc14G0005140 AT4G28030.1 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) Ipc14G0005150 AT4G16850.1 0 0 transmembrane protein;(source:Araport11) Ipc14G0005160 AT4G28025.2 0 0 hypothetical protein;(source:Araport11) Ipc14G0005170 AT3G49000.1 RNA polymerase III subunit RPC82 family protein 0 RNA polymerase III subunit RPC82 family protein;(source:Araport11) Ipc14G0005180 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc14G0005190 AT4G30360.1 cyclic nucleotide-gated channel 17 member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 17;(source:Araport11) Ipc14G0005200 AT2G18710.1 SECY homolog 1 Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. SECY homolog 1;(source:Araport11) Ipc14G0005210 AT5G57700.1 BNR/Asp-box repeat family protein 0 BNR/Asp-box repeat family protein;(source:Araport11) Ipc14G0005220 AT3G19810.2 0 0 BTB/POZ domain protein, putative (DUF177);(source:Araport11) Ipc14G0005230 AT4G20770.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc14G0005240 AT2G04865.2 0 Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.The mRNA is cell-to-cell mobile. Aminotransferase-like, plant mobile domain family protein;(source:Araport11) Ipc14G0005250 AT2G33180.1 0 0 hypothetical protein;(source:Araport11) Ipc14G0005260 AT3G12680.1 floral homeotic protein (HUA1) Member of the floral homeotic AGAMOUS pathway. floral homeotic protein (HUA1);(source:Araport11) Ipc14G0018580 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) Ipc14G0019640 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0018530 ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein Chloroplast encoded NADH dehydrogenase unit. NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein;(source:Araport11) Ipc14G0018540 AT5G36890.2 beta glucosidase 42 0 beta glucosidase 42;(source:Araport11) Ipc14G0018520 AT2G07777.1 ATP synthase 9 mitochondrial 0 ATP synthase 9 mitochondrial;(source:Araport11) Ipc14G0018510 ATMG00180.1 cytochrome C biogenesis 452 cytochrome c biogenesis orf452 cytochrome C biogenesis 452;(source:Araport11) Ipc14G0018490 #N/A #N/A #N/A #N/A Ipc14G0019570 AT1G70500.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc14G0018470 ATMG00180.1 cytochrome C biogenesis 452 cytochrome c biogenesis orf452 cytochrome C biogenesis 452;(source:Araport11) Ipc14G0018900 AT2G07749.1 Mitovirus RNA-dependent RNA polymerase 0 Mitovirus RNA-dependent RNA polymerase;(source:Araport11) Ipc14G0018910 AT3G52020.1 serine carboxypeptidase-like 39 0 serine carboxypeptidase-like 39;(source:Araport11) Ipc02G0007390 AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc02G0007400 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc02G0007410 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc02G0007420 AT4G17260.1 Lactate/malate dehydrogenase family protein 0 Lactate/malate dehydrogenase family protein;(source:Araport11) Ipc14G0005270 AT1G48350.1 Ribosomal L18p/L5e family protein 0 Ribosomal L18p/L5e family protein;(source:Araport11) Ipc14G0005280 AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein Encodes a putative zinc finger transcription factor that is necessary for proper lateral organ shape and is sufficient to induce the proliferation of lateral organ tissue. Together with NUB, it is involved in stamen and carpel development. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc14G0005290 AT2G07505.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc14G0005300 AT1G25420.1 Regulator of Vps4 activity in the MVB pathway protein 0 Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11) Ipc14G0005310 AT1G68490.1 0 0 translocase subunit seca;(source:Araport11) Ipc14G0005320 AT1G13380.1 Protein of unknown function (DUF1218) 0 sodium/hydrogen exchanger (DUF1218);(source:Araport11) Ipc14G0005330 AT1G25440.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc14G0005340 AT3G25900.1 Homocysteine S-methyltransferase family protein 0 Homocysteine S-methyltransferase family protein;(source:Araport11) Ipc14G0005350 AT1G68530.1 3-ketoacyl-CoA synthase 6 Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 6;(source:Araport11) Ipc14G0005360 AT1G68530.1 3-ketoacyl-CoA synthase 6 Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). 3-ketoacyl-CoA synthase 6;(source:Araport11) Ipc14G0005370 AT1G68550.2 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc14G0005380 AT5G34882.1 Protein of unknown function (DUF784) Encodes a ECA1 gametogenesis related family protein inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (DUF784);(source:Araport11) Ipc14G0005390 AT1G68560.1 alpha-xylosidase 1 Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. alpha-xylosidase 1;(source:Araport11) Ipc06G0009300 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc06G0009290 AT2G31880.1 Leucine-rich repeat protein kinase family protein Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc06G0009280 AT5G50260.1 Cysteine proteinases superfamily protein Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.CEP1 is expressed specifically in the tapetum from stages 5 to 11 of anther development. The CEP1 protein first appears as a proenzyme in precursor protease vesicles, and is then transported to the vacuole and transformed into the mature enzyme before rupture of the vacuole. CEP1 was also released to the tapetal cell wall during late stage 6 and stage 7. After the tapetal cell wall degenerated, the CEP1 enzyme entered the callose wall from the degenerated tapetal cell wall and was probably involved in degeneration of the callose wall. Cysteine proteinases superfamily protein;(source:Araport11) Ipc06G0009270 AT1G56720.4 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc06G0009260 AT1G79580.5 0 NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) Ipc06G0009250 AT3G17360.3 0 PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1;(source:Araport11) Ipc06G0009240 AT4G16340.2 0 Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects. guanyl-nucleotide exchange factors;(source:Araport11) Ipc06G0009230 AT1G53345.1 0 0 DHHA1 domain protein;(source:Araport11) Ipc06G0009220 AT1G17850.2 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) Ipc06G0009210 AT1G74458.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0009200 AT5G18280.1 apyrase 2 Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination. apyrase 2;(source:Araport11) Ipc06G0009190 AT5G63220.1 0 0 golgi-to-ER traffic-like protein;(source:Araport11) Ipc06G0009180 AT2G44160.1 methylenetetrahydrofolate reductase 2 methylenetetrahydrofolate reductase MTHFR2 mRNA, complete The mRNA is cell-to-cell mobile. methylenetetrahydrofolate reductase 2;(source:Araport11) Ipc06G0009170 AT2G26710.1 Cytochrome P450 superfamily protein Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion. Cytochrome P450 superfamily protein;(source:Araport11) Ipc06G0009160 AT3G59910.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0009150 AT3G59900.1 auxin-regulated gene involved in organ size Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth. auxin-regulated gene involved in organ size;(source:Araport11) Ipc06G0009140 AT1G05610.2 0 Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS2 is a minor small subunit isoform present in all plant tissues tested. ADP-glucose pyrophosphorylase small subunit 2;(source:Araport11) Ipc06G0009130 AT2G43980.1 inositol 1,3,4-trisphosphate 5/6-kinase 4 0 inositol 1,3,4-trisphosphate 5/6-kinase 4;(source:Araport11) Ipc06G0009120 AT1G14990.1 0 0 transmembrane protein;(source:Araport11) Ipc06G0009110 AT3G59630.2 0 0 diphthamide synthesis DPH2 family protein;(source:Araport11) Ipc06G0009100 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc06G0009090 AT2G43900.1 Endonuclease/exonuclease/phosphatase family protein Encodes a 5-inositol-phosphate phosphatase, that, in vitro, shows activity against IP(1,4,5). Endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc06G0009080 AT2G31820.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc06G0009070 AT2G43870.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc07G0000770 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc07G0000780 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0019840 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0019850 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0019860 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0028210 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc01G0028220 AT5G19250.1 Glycoprotein membrane precursor GPI-anchored 0 Glycoprotein membrane precursor GPI-anchored;(source:Araport11) IpcGene40684 AT1G32050.1 SCAMP family protein 0 SCAMP family protein;(source:Araport11) IpcGene40686 AT1G66720.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene40687 AT5G44750.1 DNA-directed DNA polymerases Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). DNA-directed DNA polymerase;(source:Araport11) IpcGene40690 #N/A #N/A #N/A #N/A IpcGene40691 AT5G41570.1 WRKY DNA-binding protein 24 member of WRKY Transcription Factor; Group II-c WRKY DNA-binding protein 24;(source:Araport11) IpcGene40695 AT1G02660.1 alpha/beta-Hydrolases superfamily protein PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA. alpha/beta-Hydrolases superfamily protein;(source:Araport11) IpcGene40697 AT5G47560.1 tonoplast dicarboxylate transporter Encodes a tonoplast malate/fumarate transporter. tonoplast dicarboxylate transporter;(source:Araport11) IpcGene40702 AT1G04430.3 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene40703 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) IpcGene40706 AT4G15236.1 ABC-2 and Plant PDR ABC-type transporter family protein 0 ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11) IpcGene40708 AT3G17360.1 phragmoplast orienting kinesin 1 PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1;(source:Araport11) IpcGene40715 AT4G20260.6 plasma-membrane associated cation-binding protein 1 Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels. The mRNA is cell-to-cell mobile. plasma-membrane associated cation-binding protein 1;(source:Araport11) IpcGene40716 AT1G72160.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) IpcGene40723 AT5G46920.1 Intron maturase, type II family protein 0 Intron maturase, type II family protein;(source:Araport11) IpcGene40727 AT3G14990.1 Class I glutamine amidotransferase-like superfamily protein Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal. The mRNA is cell-to-cell mobile. Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) IpcGene40728 AT4G27970.6 0 Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane. SLAC1 homologue 2;(source:Araport11) IpcGene40733 AT1G55570.1 SKU5 similar 12 0 SKU5 similar 12;(source:Araport11) IpcGene40734 AT3G50080.1 VIER F-box proteine 2 Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes. VIER F-box protein 2;(source:Araport11) IpcGene40738 AT1G32050.1 SCAMP family protein 0 SCAMP family protein;(source:Araport11) IpcGene40740 AT1G66720.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene40741 AT5G44750.1 DNA-directed DNA polymerases Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). DNA-directed DNA polymerase;(source:Araport11) IpcGene40744 #N/A #N/A #N/A #N/A IpcGene40749 AT1G02660.1 alpha/beta-Hydrolases superfamily protein PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc02G0000290 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000280 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc02G0000270 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc02G0000260 AT5G03000.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc06G0018110 AT1G04920.1 sucrose phosphate synthase 3F Encodes a protein with putative sucrose-phosphate synthase activity. sucrose phosphate synthase 3F;(source:Araport11) Ipc02G0000680 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0006710 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0017280 AT1G08540.1 RNApolymerase sigma subunit 2 Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light. RNApolymerase sigma subunit 2;(source:Araport11) Ipc11G0006320 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc11G0006330 AT5G56880.1 0 0 hypothetical protein;(source:Araport11) Ipc11G0006340 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0026300 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) IpcGene40779 #N/A #N/A #N/A #N/A IpcGene40780 AT5G35930.3 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene40781 AT3G11470.1 4'-phosphopantetheinyl transferase superfamily Encodes one of three splice variants. Differs in having YQ in positions 88 and 89. The protein is localized to the mitochondria where it phosphopantetheinylates the mature apo mtACP isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal).P isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal). 4-phosphopantetheinyl transferase superfamily;(source:Araport11) IpcGene40783 AT3G25470.1 bacterial hemolysin-related 0 bacterial hemolysin-like protein;(source:Araport11) IpcGene40784 AT5G35930.4 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene40785 #N/A #N/A #N/A #N/A IpcGene40788 AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 Encodes a protein with UDP-D-glucose 4-epimerase activity. UDP-D-glucose/UDP-D-galactose 4-epimerase 5;(source:Araport11) IpcGene40789 AT2G28760.3 UDP-XYL synthase 6 0 UDP-XYL synthase 6;(source:Araport11) IpcGene40790 AT2G38670.1 phosphorylethanolamine cytidylyltransferase 1 Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis. phosphorylethanolamine cytidylyltransferase 1;(source:Araport11) IpcGene40794 #N/A #N/A #N/A #N/A IpcGene40796 #N/A #N/A #N/A #N/A IpcGene40798 AT4G16730.1 terpene synthase 02 In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides downstream of the start codon leading to a frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present. terpene synthase 02;(source:Araport11) IpcGene40802 AT1G65020.1 0 0 plasma protein;(source:Araport11) IpcGene40803 AT1G31730.1 Adaptin family protein Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins. Adaptin family protein;(source:Araport11) IpcGene40815 AT1G30010.1 Intron maturase, type II family protein Analysis of the RNA profiles of wild-type and mutant plants establishes a role for nMAT1 in the trans-splicing of nad1 intron 1 and in the cis-splicing of nad2 intron 1 and nad4 intron 2. Intron maturase, type II family protein;(source:Araport11) IpcGene40819 AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein Encodes the Arabidopsis thaliana orthologue of metazoan Strawberry notch, a highly conserved co-activator of the developmental regulator Notch. It mediates stress-induced chromatin memory by modulating nucleosome occupancy by interacting with chromatin remodeling proteins of the ISWI and SWI/SNF classes. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) IpcGene40824 AT1G73200.1 Putative integral membrane protein conserved region (DUF2404) 0 testis-expressed sequence 2-like protein (DUF2404);(source:Araport11) IpcGene40825 #N/A #N/A #N/A #N/A IpcGene40826 AT3G59140.1 multidrug resistance-associated protein 14 member of MRP subfamily multidrug resistance-associated protein 14;(source:Araport11) IpcGene40836 AT4G39520.1 GTP-binding protein-related Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity. GTP-binding protein-like protein;(source:Araport11) IpcGene40840 AT4G34320.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) IpcGene40841 AT1G60680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) IpcGene40843 AT2G22250.3 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) IpcGene40849 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) IpcGene40851 AT5G35930.3 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene40853 AT5G35930.4 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc04G0029720 AT4G32551.1 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. transcriptional corepressor LEUNIG;(source:Araport11) Ipc04G0029710 AT2G38650.3 0 0 galacturonosyltransferase 7;(source:Araport11) Ipc04G0029700 AT1G15520.2 0 ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12;(source:Araport11) Ipc02G0000690 AT3G20000.1 translocase of the outer mitochondrial membrane 40 Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore. The mRNA is cell-to-cell mobile. translocase of the outer mitochondrial membrane 40;(source:Araport11) Ipc02G0000700 AT3G03660.4 0 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WUSCHEL related homeobox 11;(source:Araport11) Ipc02G0000710 AT1G61890.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc02G0000720 AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related 0 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc02G0000730 AT4G02600.2 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc02G0000740 AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0 DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11) Ipc09G0015120 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc09G0015110 AT5G20740.2 0 0 Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11) Ipc09G0015100 AT1G06820.4 0 Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene. carotenoid isomerase;(source:Araport11) Ipc09G0015090 AT4G20160.3 0 0 golgin family A protein;(source:Araport11) Ipc09G0015080 AT1G01830.3 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc09G0015070 AT1G13880.2 0 0 ELM2 domain-containing protein;(source:Araport11) Ipc09G0011460 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0011470 AT1G61100.1 disease resistance protein (TIR class), putative 0 disease resistance protein (TIR class);(source:Araport11) Ipc10G0000300 AT1G10570.1 Cysteine proteinases superfamily protein Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc09G0015060 AT1G21240.2 0 encodes a wall-associated kinaseThe mRNA is cell-to-cell mobile. wall associated kinase 3;(source:Araport11) Ipc01G0023940 AT2G34750.1 RNA polymerase I specific transcription initiation factor RRN3 protein 0 RNA polymerase I specific transcription initiation factor RRN3 protein;(source:Araport11) Ipc01G0023950 AT1G71950.1 Proteinase inhibitor, propeptide SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase. Proteinase inhibitor, propeptide;(source:Araport11) IpcGene40890 AT3G21240.3 0 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. 4-coumarate:CoA ligase 2;(source:Araport11) IpcGene40893 AT1G16300.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 2 Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots. glyceraldehyde-3-phosphate dehydrogenase of plastid 2;(source:Araport11) IpcGene40894 AT3G12780.1 phosphoglycerate kinase 1 PGK1 was localized exclusively in the chloroplasts of photosynthetic tissues and is the photosynthetic isoform. The pgk1.1 knock-down mutant displayed reduced growth, lower photosynthetic capacity and starch content. Expression studies in PGK mutants showed that PGK1 and PGK3 were down-regulated in pgk3.2 and pgk1.1, respectively. These results indicate that the down-regulation of photosynthetic activity could be a plant strategy when glycolysis is impaired to achieve metabolic adjustment and optimize growth (DOI:10.1104/pp.17.01227).Functions redundantly with AT1G56190 in the chloroplast in the biosynthesis of thylakoid membrane galactolipids. Double mutants are photosynthetically incompetent, plants are albino and seedling lethal phosphoglycerate kinase 1;(source:Araport11) IpcGene40898 AT1G22940.1 thiamin biosynthesis protein, putative Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media. thiamin biosynthesis protein;(source:Araport11) IpcGene40899 AT3G16290.1 AAA-type ATPase family protein Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). AAA-type ATPase family protein;(source:Araport11) IpcGene40900 AT4G26310.1 elongation factor P (EF-P) family protein 0 elongation factor P (EF-P) family protein;(source:Araport11) IpcGene40901 AT3G02870.1 Inositol monophosphatase family protein Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis. Inositol monophosphatase family protein;(source:Araport11) IpcGene40902 ATMG00070.1 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9 NADH dehydrogenase subunit 9;(source:Araport11) IpcGene40904 AT5G08530.1 51 kDa subunit of complex I 0 51 kDa subunit of complex I;(source:Araport11) IpcGene40905 AT5G37510.1 NADH-ubiquinone dehydrogenase, mitochondrial, putative Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. The mRNA is cell-to-cell mobile. NADH-ubiquinone dehydrogenase;(source:Araport11) IpcGene40907 ATMG00650.1 NADH dehydrogenase subunit 4L Encodes NADH dehydrogenase subunit 4L. NADH dehydrogenase subunit 4L;(source:Araport11) IpcGene40910 AT1G37150.1 holocarboxylase synthetase 2 Although HCS2 is predicted to encode a biotin protein ligase / holocarboxylase synthetase (HCS), hcs2 mutants do not show a decrease in HCS activity. A dual-targeted HCS1 (At2g25710) might account for the HCS activity observed in multiple subcellular compartments in Arabidopsis. holocarboxylase synthetase 2;(source:Araport11) IpcGene40912 AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein Encodes a member of the metallo-beta-lactamase protein family that plays a vital role in embryo morphogenesis and apical-basal pattern formation by regulating chloroplast development. In bacteria, RNase J plays an important role in rRNA maturation and in the 5′ stability of mRNA. RNA-metabolising metallo-beta-lactamase family protein;(source:Araport11) IpcGene40915 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) IpcGene40916 AT2G42790.1 citrate synthase 3 Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development. citrate synthase 3;(source:Araport11) IpcGene40918 AT5G33280.1 Voltage-gated chloride channel family protein 0 Voltage-gated chloride channel family protein;(source:Araport11) IpcGene40919 AT5G43100.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) IpcGene40920 AT5G20990.1 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling. molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1);(source:Araport11) IpcGene40923 AT2G29690.1 anthranilate synthase 2 Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis. anthranilate synthase 2;(source:Araport11) IpcGene40926 AT4G30910.1 Cytosol aminopeptidase family protein 0 Cytosol aminopeptidase family protein;(source:Araport11) IpcGene40928 AT2G27170.4 0 Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. Structural maintenance of chromosomes (SMC) family protein;(source:Araport11) IpcGene40934 AT4G10120.4 0 Encodes a protein with putative sucrose-phosphate synthase activity. Sucrose-phosphate synthase family protein;(source:Araport11) IpcGene40936 AT5G36880.6 0 Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway acetyl-CoA synthetase;(source:Araport11) IpcGene40938 AT1G15440.2 periodic tryptophan protein 2 Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development. periodic tryptophan protein 2;(source:Araport11) IpcGene40941 AT5G35930.3 0 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene40942 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) IpcGene40943 AT5G17080.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) IpcGene40944 AT3G48000.1 aldehyde dehydrogenase 2B4 Encodes a putative (NAD+) aldehyde dehydrogenase. aldehyde dehydrogenase 2B4;(source:Araport11) IpcGene40946 #N/A #N/A #N/A #N/A IpcGene40947 #N/A #N/A #N/A #N/A IpcGene40949 AT1G23800.1 aldehyde dehydrogenase 2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. aldehyde dehydrogenase 2B7;(source:Araport11) IpcGene40950 AT5G51930.2 0 0 Glucose-methanol-choline (GMC) oxidoreductase family protein;(source:Araport11) IpcGene40951 AT4G32520.2 serine hydroxymethyltransferase 3 Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid. serine hydroxymethyltransferase 3;(source:Araport11) IpcGene40954 #N/A #N/A #N/A #N/A IpcGene40955 AT5G35380.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) IpcGene40956 AT2G32730.1 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 0 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit;(source:Araport11) IpcGene40960 AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein Encodes the Arabidopsis thaliana orthologue of metazoan Strawberry notch, a highly conserved co-activator of the developmental regulator Notch. It mediates stress-induced chromatin memory by modulating nucleosome occupancy by interacting with chromatin remodeling proteins of the ISWI and SWI/SNF classes. RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) IpcGene40963 AT1G30010.1 Intron maturase, type II family protein Analysis of the RNA profiles of wild-type and mutant plants establishes a role for nMAT1 in the trans-splicing of nad1 intron 1 and in the cis-splicing of nad2 intron 1 and nad4 intron 2. Intron maturase, type II family protein;(source:Araport11) IpcGene40966 AT5G07610.1 F-box family protein 0 F-box family protein;(source:Araport11) IpcGene40967 AT1G16060.1 ARIA-interacting double AP2 domain protein Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth. ARIA-interacting double AP2 domain protein;(source:Araport11) IpcGene40977 AT2G19120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0000210 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc07G0000200 ATCG01300.1 ribosomal protein L23 One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex ribosomal protein L23;(source:Araport11) Ipc07G0000190 ATCG01310.1 ribosomal protein L2 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex ribosomal protein L2;(source:Araport11) Ipc07G0000180 ATCG00020.1 photosystem II reaction center protein A Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core photosystem II reaction center protein A;(source:Araport11) Ipc07G0000170 ATCG00070.1 photosystem II reaction center protein K precursor PSII K protein photosystem II reaction center protein K precursor;(source:Araport11) Ipc07G0000160 ATCG00120.1 ATP synthase subunit alpha Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. ATP synthase subunit alpha;(source:Araport11) Ipc07G0000150 ATCG00130.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast ATPase F subunit. ATPase, F0 complex, subunit B/B, bacterial/chloroplast;(source:Araport11) Ipc07G0000140 ATCG00140.1 ATP synthase subunit C family protein ATPase III subunit ATP synthase subunit C family protein;(source:Araport11) Ipc07G0000130 ATCG00160.1 ribosomal protein S2 Chloroplast ribosomal protein S2 ribosomal protein S2;(source:Araport11) Ipc07G0000120 ATCG00180.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-1 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc07G0000110 ATCG00190.1 RNA polymerase subunit beta Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta;(source:Araport11) Ipc07G0000100 ATCG00280.1 photosystem II reaction center protein C chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. photosystem II reaction center protein C;(source:Araport11) Ipc07G0000090 ATCG00330.1 chloroplast ribosomal protein S14 30S chloroplast ribosomal protein S14 chloroplast ribosomal protein S14;(source:Araport11) Ipc07G0000080 ATCG00350.1 Photosystem I, PsaA/PsaB protein Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. Photosystem I, PsaA/PsaB protein;(source:Araport11) Ipc07G0000070 ATCG00360.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I. photosystem I assembly protein;(source:Araport11) Ipc07G0000060 ATCG00380.1 chloroplast ribosomal protein S4 Chloroplast encoded ribosomal protein S4 chloroplast ribosomal protein S4;(source:Araport11) Ipc07G0000050 ATCG00420.1 NADH dehydrogenase subunit J Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion. NADH dehydrogenase subunit J;(source:Araport11) Ipc07G0000040 ATCG00430.1 photosystem II reaction center protein G Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. photosystem II reaction center protein G;(source:Araport11) Ipc07G0000030 ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein;(source:Araport11) Ipc07G0000020 ATCG00480.1 ATP synthase subunit beta chloroplast-encoded gene for beta subunit of ATP synthase ATP synthase subunit beta;(source:Araport11) Ipc07G0000010 ATCG00490.1 ribulose-bisphosphate carboxylases large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ribulose-bisphosphate carboxylase;(source:Araport11) Ipc14G0019060 ATCG01110.1 NAD(P)H dehydrogenase subunit H Encodes the 49KDa plastid NAD(P)H dehydrogenase subunit H protein. Its transcription is regulated by an ndhF-specific plastid sigma factor, SIG4. NAD(P)H dehydrogenase subunit H;(source:Araport11) Ipc14G0019070 ATCG01130.1 Ycf1 protein 0 Ycf1 protein;(source:Araport11) Ipc14G0019030 ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding Encodes the PsaC subunit of photosystem I. iron-sulfur cluster binding;(source:Araport11) Ipc14G0019040 ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NADH dehydrogenase ND4L NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;(source:Araport11) Ipc14G0019050 ATCG01090.1 NADPH dehydrogenases Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex NADPH dehydrogenase;(source:Araport11) Ipc14G0019440 AT5G54690.1 galacturonosyltransferase 12 Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). galacturonosyltransferase 12;(source:Araport11) Ipc14G0019410 #N/A #N/A #N/A #N/A Ipc14G0019390 AT1G79050.1 recA DNA recombination family protein 0 recA DNA recombination family protein;(source:Araport11) Ipc14G0019350 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0019370 ATCG01240.1 ribosomal protein S7 30S chloroplast ribosomal protein S7 ribosomal protein S7;(source:Araport11) Ipc14G0019340 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0019300 ATCG00790.1 ribosomal protein L16 chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit ribosomal protein L16;(source:Araport11) Ipc14G0019320 ATCG01310.1 ribosomal protein L2 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex ribosomal protein L2;(source:Araport11) Ipc14G0019310 ATCG00800.1 structural constituent of ribosome encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex structural constituent of ribosome;(source:Araport11) Ipc14G0019290 ATCG00780.1 ribosomal protein L14 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex ribosomal protein L14;(source:Araport11) Ipc14G0019260 ATCG00740.1 RNA polymerase subunit alpha RNA polymerase alpha subunit RNA polymerase subunit alpha;(source:Araport11) Ipc14G0019330 ATCG01300.1 ribosomal protein L23 One of two chloroplast genes that encode chloroplast ribosomal protein L23, a constituent of the large subunit of the ribosomal complex ribosomal protein L23;(source:Araport11) Ipc14G0019280 ATCG00770.1 ribosomal protein S8 chloroplast 30S ribosomal protein S8 ribosomal protein S8;(source:Araport11) Ipc14G0019270 ATCG00750.1 ribosomal protein S11 30S chloroplast ribosomal protein S11 ribosomal protein S11;(source:Araport11) Ipc14G0019250 ATCG00710.1 photosystem II reaction center protein H Encodes a 8 kD phosphoprotein that is a component of the photosystem II oxygen evolving core. Its exact molecular function has not been determined but it may play a role in mediating electron transfer between the secondary quinone acceptors, QA and QB, associated with the acceptor side of PSII. photosystem II reaction center protein H;(source:Araport11) Ipc14G0019240 ATCG00680.1 photosystem II reaction center protein B encodes for CP47, subunit of the photosystem II reaction center. photosystem II reaction center protein B;(source:Araport11) Ipc14G0019230 ATCG00660.1 ribosomal protein L20 encodes a chloroplast ribosomal protein L20, a constituent of the large subunit of the ribosomal complex ribosomal protein L20;(source:Araport11) Ipc14G0019200 ATCG00530.1 CemA-like proton extrusion protein-related 0 CemA-like proton extrusion protein-like protein;(source:Araport11) Ipc14G0019210 ATCG00540.1 photosynthetic electron transfer A Encodes cytochrome f apoprotein; involved in photosynthetic electron transport chain; encoded by the chloroplast genome and is transcriptionally repressed by a nuclear gene HCF2. photosynthetic electron transfer A;(source:Araport11) Ipc14G0019220 ATCG00580.1 photosystem II reaction center protein E PSII cytochrome b559. There have been many speculations about the function of Cyt b559, but the most favored at present is that it plays a protective role by acting as an electron acceptor or electron donor under conditions when electron flow through PSII is not optimized. photosystem II reaction center protein E;(source:Araport11) Ipc14G0019190 ATCG00520.1 unfolded protein binding Encodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth. unfolded protein binding protein;(source:Araport11) Ipc14G0019170 ATCG00490.1 ribulose-bisphosphate carboxylases large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ribulose-bisphosphate carboxylase;(source:Araport11) Ipc14G0019180 ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta Encodes the carboxytransferase beta subunit of the Acetyl-CoA carboxylase (ACCase) complex in plastids. This complex catalyzes the carboxylation of acetyl-CoA to produce malonyl-CoA, the first committed step in fatty acid synthesis. acetyl-CoA carboxylase carboxyl transferase subunit beta;(source:Araport11) IpcGene41044 AT5G53460.3 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase The mRNA is cell-to-cell mobile. NADH-dependent glutamate synthase 1;(source:Araport11) IpcGene41046 AT2G41220.1 glutamate synthase 2 Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root. The mRNA is cell-to-cell mobile. glutamate synthase 2;(source:Araport11) IpcGene41047 AT1G44820.1 Peptidase M20/M25/M40 family protein 0 Peptidase M20/M25/M40 family protein;(source:Araport11) IpcGene41048 AT2G30070.1 potassium transporter 1 Encodes a high affinity potassium transporter. potassium transporter 1;(source:Araport11) IpcGene41049 AT5G44370.1 phosphate transporter 4;6 Encodes an inorganic phosphate transporter (PHT4;6). phosphate transporter 4;(source:Araport11) IpcGene41051 AT5G07460.1 peptidemethionine sulfoxide reductase 2 ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness. peptidemethionine sulfoxide reductase 2;(source:Araport11) IpcGene41052 AT2G22250.1 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) IpcGene41053 AT2G28880.1 para-aminobenzoate (PABA) synthase family protein ADCS encodes a protein that has two functional domains. The N-terminal domain has glutamine amidotransferase activity while the C-terminal domain has aminodeoxychorismate synthase (ADCS) activity. These two domains act together to catalyze the transformation of chorismate to 4-amino-4-deoxychorismate. This reaction is required for 4-aminobenzoate (pABA) production and ultimately for folate biosynthesis. The putative target peptide of ADCS can direct GFP to the chloroplast. para-aminobenzoate (PABA) synthase family protein;(source:Araport11) IpcGene41054 AT1G06130.1 glyoxalase 2-4 0 glyoxalase 2-4;(source:Araport11) IpcGene41055 AT5G63840.1 Glycosyl hydrolases family 31 protein radial swelling mutant shown to be specifically impaired in cellulose production. Encodes the alpha-subunit of a glucosidase II enzyme. Glycosyl hydrolases family 31 protein;(source:Araport11) IpcGene41058 AT3G03560.1 0 0 hypothetical protein;(source:Araport11) IpcGene41060 AT1G62750.1 Translation elongation factor EFG/EF2 protein Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. Translation elongation factor EFG/EF2 protein;(source:Araport11) IpcGene41062 AT1G72550.1 tRNA synthetase beta subunit family protein 0 tRNA synthetase beta subunit family protein;(source:Araport11) IpcGene41063 AT4G39280.2 phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative 0 phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase;(source:Araport11) IpcGene41064 AT1G16740.1 Ribosomal protein L20 0 Ribosomal protein L20;(source:Araport11) IpcGene41066 AT4G39120.1 myo-inositol monophosphatase like 2 Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro. inositol monophosphatase family protein;(source:Araport11) IpcGene41067 AT3G26060.1 Thioredoxin superfamily protein encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus Thioredoxin superfamily protein;(source:Araport11) IpcGene41069 AT5G01300.3 0 0 PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11) IpcGene41071 AT1G27880.1 DEAD/DEAH box RNA helicase family protein 0 DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc14G0019090 ATCG00160.1 ribosomal protein S2 Chloroplast ribosomal protein S2 ribosomal protein S2;(source:Araport11) Ipc10G0006680 ATCG00170.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-2 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc14G0019080 ATCG00170.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-2 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc14G0019120 ATCG00120.1 ATP synthase subunit alpha Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast. ATP synthase subunit alpha;(source:Araport11) Ipc14G0019100 ATCG00140.1 ATP synthase subunit C family protein ATPase III subunit ATP synthase subunit C family protein;(source:Araport11) Ipc14G0019110 ATCG00130.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast ATPase F subunit. ATPase, F0 complex, subunit B/B, bacterial/chloroplast;(source:Araport11) Ipc14G0019130 ATCG00070.1 photosystem II reaction center protein K precursor PSII K protein photosystem II reaction center protein K precursor;(source:Araport11) Ipc14G0019140 ATCG00050.1 ribosomal protein S16 Homologous to the bacterial ribosomal protein S16 ribosomal protein S16;(source:Araport11) Ipc14G0019150 ATCG00040.1 maturase K Encodes a maturase located in the trnK intron in the chloroplast genome. maturase K;(source:Araport11) Ipc14G0019160 ATCG00020.1 photosystem II reaction center protein A Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core photosystem II reaction center protein A;(source:Araport11) IpcGene41083 AT5G63680.3 0 0 Pyruvate kinase family protein;(source:Araport11) IpcGene41089 AT2G25830.1 YebC-related 0 YebC-like protein;(source:Araport11) IpcGene41091 AT1G24290.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) IpcGene41092 AT4G15530.2 pyruvate orthophosphate dikinase Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues. pyruvate orthophosphate dikinase;(source:Araport11) IpcGene41093 AT3G04180.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) IpcGene41094 AT5G42270.1 FtsH extracellular protease family VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Phosphorylation of this protein is dependent on calcium. The mRNA is cell-to-cell mobile. FtsH extracellular protease family;(source:Araport11) IpcGene41102 AT1G55920.1 serine acetyltransferase 2;1 Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. The mRNA is cell-to-cell mobile. serine acetyltransferase 2;(source:Araport11) IpcGene41103 AT1G15040.2 Class I glutamine amidotransferase-like superfamily protein Encodes a nitrogen regulated putative glutamine amidotransferase that represses shoot branching. Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) IpcGene41104 AT1G50940.1 electron transfer flavoprotein alpha Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness. electron transfer flavoprotein alpha;(source:Araport11) IpcGene41105 AT2G20420.1 ATP citrate lyase (ACL) family protein 0 ATP citrate lyase (ACL) family protein;(source:Araport11) IpcGene41106 AT2G35390.4 0 0 Phosphoribosyltransferase family protein;(source:Araport11) IpcGene41109 AT5G58270.1 ABC transporter of the mitochondrion 3 Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis. ABC transporter of the mitochondrion 3;(source:Araport11) IpcGene41110 AT1G10930.1 DNA helicase (RECQl4A) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. DNA helicase (RECQl4A);(source:Araport11) IpcGene41111 AT2G06050.3 oxophytodienoate-reductase 3 Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can restore the fertility of opr3 plants by inducing filament elongation and anther dehiscence. oxophytodienoate-reductase 3;(source:Araport11) IpcGene41122 AT3G26590.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) IpcGene41125 AT5G64680.2 0 0 mediator-associated protein;(source:Araport11) IpcGene41133 AT1G21065.1 0 0 secondary thiamine-phosphate synthase enzyme;(source:Araport11) IpcGene41136 AT5G01330.1 pyruvate decarboxylase-3 pyruvate decarboxylase pyruvate decarboxylase-3;(source:Araport11) IpcGene41137 AT2G40760.1 Rhodanese/Cell cycle control phosphatase superfamily protein 0 Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11) IpcGene41138 AT2G17510.1 ribonuclease II family protein 0 ribonuclease II family protein;(source:Araport11) IpcGene41142 AT1G04710.1 peroxisomal 3-ketoacyl-CoA thiolase 4 EC2.3.1.16 thiolase. Its transcript levels change after inducing MUTE expression in a mute background. peroxisomal 3-ketoacyl-CoA thiolase 4;(source:Araport11) IpcGene41145 AT5G39040.1 transporter associated with antigen processing protein 2 Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2;(source:Araport11) IpcGene41146 AT5G39410.1 Saccharopine dehydrogenase 0 Saccharopine dehydrogenase;(source:Araport11) IpcGene41147 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) IpcGene41148 AT2G38060.1 phosphate transporter 4;2 Encodes an inorganic phosphate transporter (PHT4;2). phosphate transporter 4;(source:Araport11) IpcGene41150 AT3G19380.1 plant U-box 25 PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation. plant U-box 25;(source:Araport11) IpcGene41152 AT1G06820.3 0 Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene. carotenoid isomerase;(source:Araport11) IpcGene41154 AT4G35190.1 Putative lysine decarboxylase family protein 0 Putative lysine decarboxylase family protein;(source:Araport11) IpcGene41155 AT1G03475.1 Coproporphyrinogen III oxidase Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection. Coproporphyrinogen III oxidase;(source:Araport11) IpcGene41156 AT5G26880.1 AGAMOUS-like 26 Root Specific tRNA (cytidine(34)-2-O)-methyltransferase;(source:Araport11) IpcGene41157 AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit 0 Ubiquinol-cytochrome C reductase iron-sulfur subunit;(source:Araport11) IpcGene41158 AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal 0 cytochrome b;(source:Araport11) IpcGene41159 AT3G27240.1 Cytochrome C1 family 0 Cytochrome C1 family;(source:Araport11) IpcGene41162 AT2G01830.2 CHASE domain containing histidine kinase protein Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane CHASE domain containing histidine kinase protein;(source:Araport11) IpcGene41166 AT2G01760.2 0 member of Response Regulator: B- Type response regulator 14;(source:Araport11) IpcGene41168 AT5G10720.1 histidine kinase 5 member of Histidine Kinase histidine kinase 5;(source:Araport11) IpcGene41170 AT5G17530.5 0 0 phosphoglucosamine mutase family protein;(source:Araport11) IpcGene41172 AT4G31210.3 0 0 DNA topoisomerase, type IA, core;(source:Araport11) IpcGene41177 AT5G04620.2 biotin F The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms. biotin F;(source:Araport11) IpcGene41179 AT4G32520.2 serine hydroxymethyltransferase 3 Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid. serine hydroxymethyltransferase 3;(source:Araport11) IpcGene41182 ATCG00380.1 chloroplast ribosomal protein S4 Chloroplast encoded ribosomal protein S4 chloroplast ribosomal protein S4;(source:Araport11) IpcGene41183 AT5G08170.1 porphyromonas-type peptidyl-arginine deiminase family protein 0 porphyromonas-type peptidyl-arginine deiminase family protein;(source:Araport11) IpcGene41184 AT2G27450.1 nitrilase-like protein 1 Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis. nitrilase-like protein 1;(source:Araport11) IpcGene41185 AT4G00240.2 0 member of C2-PLD subfamily phospholipase D beta 2;(source:Araport11) IpcGene41189 AT5G61640.1 peptidemethionine sulfoxide reductase 1 ubiquitous enzyme that repairs oxidatively damaged proteins peptidemethionine sulfoxide reductase 1;(source:Araport11) IpcGene41191 AT4G35970.1 ascorbate peroxidase 5 Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. ascorbate peroxidase 5;(source:Araport11) IpcGene41194 AT5G43940.1 GroES-like zinc-binding dehydrogenase family protein Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility. GroES-like zinc-binding dehydrogenase family protein;(source:Araport11) IpcGene41195 AT2G41530.1 S-formylglutathione hydrolase Encodes a protein with S-formylglutathione hydrolase activity. S-formylglutathione hydrolase;(source:Araport11) IpcGene41196 AT3G23640.2 heteroglycan glucosidase 1 0 heteroglycan glucosidase 1;(source:Araport11) IpcGene41197 AT1G74260.1 purine biosynthesis 4 Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development. purine biosynthesis 4;(source:Araport11) IpcGene41203 AT1G67710.1 response regulator 11 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Affects ABA-JA crosstalk. response regulator 11;(source:Araport11) IpcGene41204 AT1G27320.1 histidine kinase 3 Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2. The mRNA is cell-to-cell mobile. histidine kinase 3;(source:Araport11) IpcGene41207 AT1G57720.2 Translation elongation factor EF1B, gamma chain 0 Translation elongation factor EF1B, gamma chain;(source:Araport11) IpcGene41209 #N/A #N/A #N/A #N/A IpcGene41216 AT1G70290.1 trehalose-6-phosphatase synthase S8 Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants. trehalose-6-phosphatase synthase S8;(source:Araport11) IpcGene41218 AT4G11640.1 serine racemase Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases. serine racemase;(source:Araport11) IpcGene41219 AT3G55850.6 0 Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids. Amidohydrolase family;(source:Araport11) IpcGene41220 AT1G67710.1 response regulator 11 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Affects ABA-JA crosstalk. response regulator 11;(source:Araport11) IpcGene41222 AT1G67710.1 response regulator 11 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Affects ABA-JA crosstalk. response regulator 11;(source:Araport11) IpcGene41223 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) IpcGene41224 AT1G02816.1 Protein of unknown function, DUF538 0 pectinesterase (Protein of unknown function, DUF538);(source:Araport11) IpcGene41225 AT3G03710.1 polyribonucleotide nucleotidyltransferase, putative Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings. polyribonucleotide nucleotidyltransferase;(source:Araport11) IpcGene41230 AT4G11160.2 0 0 Translation initiation factor 2, small GTP-binding protein;(source:Araport11) IpcGene41232 AT5G04430.1 binding to TOMV RNA 1L (long form) Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication. binding to TOMV RNA 1L (long form);(source:Araport11) IpcGene41236 AT5G48880.1 peroxisomal 3-keto-acyl-CoA thiolase 2 Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. EC2.3.1.16 thiolases. AT5G48880.1 is named PKT1 and AT5G48880.2 is named PKT2. peroxisomal 3-keto-acyl-CoA thiolase 2;(source:Araport11) IpcGene41238 AT3G58570.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) IpcGene41239 AT3G45300.1 isovaleryl-CoA-dehydrogenase Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. The mRNA is cell-to-cell mobile. isovaleryl-CoA-dehydrogenase;(source:Araport11) IpcGene41241 AT1G55510.1 branched-chain alpha-keto acid decarboxylase E1 beta subunit branched-chain alpha-keto acid decarboxylase E1 beta branched-chain alpha-keto acid decarboxylase E1 beta subunit;(source:Araport11) IpcGene41242 AT3G06850.2 2-oxoacid dehydrogenases acyltransferase family protein dihydrolipoamide branched chain acyltransferase 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) IpcGene41244 AT3G54660.1 glutathione reductase Encodes glutathione reductase that is most likely localized in the chloroplast. glutathione reductase;(source:Araport11) IpcGene41245 AT5G42740.2 0 0 Sugar isomerase (SIS) family protein;(source:Araport11) IpcGene41247 AT5G41070.1 dsRNA-binding protein 5 Encodes a double-stranded RNA binding protein. dsRNA-binding protein 5;(source:Araport11) IpcGene41248 AT5G66470.2 0 0 GTP-binding protein Era-like protein;(source:Araport11) IpcGene41250 #N/A #N/A #N/A #N/A IpcGene41251 AT3G06620.1 PAS domain-containing protein tyrosine kinase family protein 0 PAS domain-containing protein tyrosine kinase family protein;(source:Araport11) IpcGene41253 AT1G48030.5 0 Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light. mitochondrial lipoamide dehydrogenase 1;(source:Araport11) IpcGene41254 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) IpcGene41255 AT3G16857.1 response regulator 1 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 1;(source:Araport11) IpcGene41256 AT2G30210.1 laccase 3 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). laccase 3;(source:Araport11) IpcGene41260 AT1G63440.1 heavy metal atpase 5 The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed. heavy metal atpase 5;(source:Araport11) IpcGene41261 AT1G65860.1 flavin-monooxygenase glucosinolate S-oxygenase 1 belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates flavin-monooxygenase glucosinolate S-oxygenase 1;(source:Araport11) IpcGene41262 AT5G17990.1 tryptophan biosynthesis 1 Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. The mRNA is cell-to-cell mobile. tryptophan biosynthesis 1;(source:Araport11) IpcGene41263 AT1G61010.5 0 0 cleavage and polyadenylation specificity factor 73-I;(source:Araport11) IpcGene41264 AT5G63620.1 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes an oxidoreductase involved in transducing the perception of E-2-hexenal, which changes the redox status of the mitochondria. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) IpcGene41265 AT1G01710.1 Acyl-CoA thioesterase family protein 0 acyl-CoA thioesterase II;(source:Araport11) IpcGene41266 AT5G59130.3 0 0 Subtilase family protein;(source:Araport11) IpcGene41268 AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) IpcGene41270 AT3G55350.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) IpcGene41271 AT1G67890.3 0 Encodes a protein with similarity to RAF MAP kinases. Based on loss of function phenotype, RAF11 appears to be involved in mediating ABA responses such as dormancy and environmental stress. Expressed in most plant tissues but excluded from root tips and young leaves. PAS domain-containing protein tyrosine kinase family protein;(source:Araport11) IpcGene41278 AT4G29210.1 gamma-glutamyl transpeptidase 4 The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32. gamma-glutamyl transpeptidase 4;(source:Araport11) IpcGene41279 #N/A #N/A #N/A #N/A IpcGene41280 AT5G44320.1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11) IpcGene41284 AT1G52030.2 myrosinase-binding protein 2 Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers. myrosinase-binding protein 2;(source:Araport11) IpcGene41285 AT1G02640.1 beta-xylosidase 2 encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. beta-xylosidase 2;(source:Araport11) IpcGene41287 AT2G30930.1 0 0 hypothetical protein;(source:Araport11) IpcGene41293 AT1G02640.1 beta-xylosidase 2 encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. beta-xylosidase 2;(source:Araport11) IpcGene41294 AT5G04885.2 0 Encodes a beta-glucosidase involved in xyloglucan metabolism. Glycosyl hydrolase family protein;(source:Araport11) Ipc14G0019360 ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core 0 Chloroplast Ycf2;(source:Araport11) Ipc14G0019380 ATCG01240.1 ribosomal protein S7 30S chloroplast ribosomal protein S7 ribosomal protein S7;(source:Araport11) Ipc14G0019400 AT1G79050.1 recA DNA recombination family protein 0 recA DNA recombination family protein;(source:Araport11) Ipc14G0019420 #N/A #N/A #N/A #N/A Ipc14G0019430 AT5G59680.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) IpcGene41305 AT5G54500.2 flavodoxin-like quinone reductase 1 Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. flavodoxin-like quinone reductase 1;(source:Araport11) IpcGene41307 AT2G31350.1 glyoxalase 2-5 Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II). glyoxalase 2-5;(source:Araport11) IpcGene41308 AT2G01760.1 response regulator 14 member of Response Regulator: B- Type response regulator 14;(source:Araport11) IpcGene41312 AT1G63680.3 0 Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. ALBINO OR PALE-GREEN 13;(source:Araport11) IpcGene41314 AT2G04842.2 0 Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. threonyl-tRNA synthetase, putative / threonine-tRNA ligase;(source:Araport11) IpcGene41315 AT2G24060.1 Translation initiation factor 3 protein SUPPRESSOR OF VARIEGATION9 (SVR9),encodes a chloroplast-localized prokaryotic type translation initiation factor 3. Mutant plants shows both chloroplast development defect, and a series of leaf developmental abnormalities including more serrated leaf margin, disorganized mesophyll cells, and altered cotyledon venation patterns. Translation initiation factor 3 protein;(source:Araport11) IpcGene41319 AT2G36880.2 methionine adenosyltransferase 3 0 methionine adenosyltransferase 3;(source:Araport11) IpcGene41323 #N/A #N/A #N/A #N/A IpcGene41326 AT3G19620.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) IpcGene41329 AT4G20760.2 0 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) IpcGene41330 AT5G57123.1 0 0 hypothetical protein;(source:Araport11) IpcGene41333 AT5G55050.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) IpcGene41336 AT1G54280.3 0 Encodes a member of the P4 subfamily of P-type ATPases expressed in the pollen plasma membrane. Double mutants with ALA7 display pollen and pollen tube defects. ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) IpcGene41337 AT5G49680.2 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain Conserved among eukaryotes, similar to Arabidopsis SABRE. The phenotype of the kip/sab double mutant suggests related functions for both genes, however, the KIP protein is mostly required for tip-growth. Predicted to be targeted to the secretory pathway. mRNA was detected in all organs, with most abundance in pollen and roots. SABRE-like protein;(source:Araport11) IpcGene41339 AT1G60750.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) IpcGene41341 AT5G44680.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) IpcGene41346 #N/A #N/A #N/A #N/A IpcGene41351 AT4G30110.2 0 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc heavy metal atpase 2;(source:Araport11) IpcGene41357 AT1G04580.1 aldehyde oxidase 4 Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds. aldehyde oxidase 4;(source:Araport11) IpcGene41358 AT2G27150.2 abscisic aldehyde oxidase 3 Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis. abscisic aldehyde oxidase 3;(source:Araport11) IpcGene41361 AT4G31920.1 response regulator 10 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 10;(source:Araport11) IpcGene41364 #N/A #N/A #N/A #N/A IpcGene41367 AT3G10840.3 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) IpcGene41368 AT5G50700.1 hydroxysteroid dehydrogenase 1 Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. hydroxysteroid dehydrogenase 1;(source:Araport11) IpcGene41369 AT4G32540.1 Flavin-binding monooxygenase family protein Mutant has elevated levels of free IAA in dominant mutant allele; Flavin Monooxygenase-Like Enzyme; Auxin Biosynthesis Flavin-binding monooxygenase family protein;(source:Araport11) IpcGene41370 AT1G27320.1 histidine kinase 3 Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2. The mRNA is cell-to-cell mobile. histidine kinase 3;(source:Araport11) IpcGene41371 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) IpcGene41376 AT1G22800.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) IpcGene41377 AT3G07270.1 GTP cyclohydrolase I 0 GTP cyclohydrolase I;(source:Araport11) IpcGene41380 AT4G22360.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) IpcGene41381 AT3G22425.2 imidazoleglycerol-phosphate dehydratase Encodes imidazoleglycerolphosphate dehydratase. imidazoleglycerol-phosphate dehydratase;(source:Araport11) IpcGene41385 AT3G56490.1 HIS triad family protein 3 Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro. HIS triad family protein 3;(source:Araport11) IpcGene41386 AT1G58030.1 cationic amino acid transporter 2 Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast. cationic amino acid transporter 2;(source:Araport11) IpcGene41387 AT4G39800.1 myo-inositol-1-phosphate synthase 1 ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. myo-inositol-1-phosphate synthase 1;(source:Araport11) IpcGene41388 AT1G55090.1 carbon-nitrogen hydrolase family protein 0 carbon-nitrogen hydrolase family protein;(source:Araport11) IpcGene41390 AT2G39140.1 pseudouridine synthase family protein Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins. pseudouridine synthase family protein;(source:Araport11) IpcGene41394 AT5G50370.1 Adenylate kinase family protein 0 Adenylate kinase family protein;(source:Araport11) IpcGene41396 AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) IpcGene41397 AT5G64670.1 Ribosomal protein L18e/L15 superfamily protein 0 Ribosomal protein L18e/L15 superfamily protein;(source:Araport11) IpcGene41399 #N/A #N/A #N/A #N/A IpcGene41400 AT1G05190.1 Ribosomal protein L6 family Encodes the plastid 50S ribosomal protein L6. Ribosomal protein L6 family;(source:Araport11) IpcGene41401 AT4G01310.1 Ribosomal L5P family protein 0 Ribosomal L5P family protein;(source:Araport11) IpcGene41402 ATCG00780.1 ribosomal protein L14 encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex ribosomal protein L14;(source:Araport11) IpcGene41403 AT1G79850.1 ribosomal protein S17 nuclear-encoded 30S chloroplast ribosomal protein S17 ribosomal protein S17;(source:Araport11) IpcGene41405 ATCG00800.1 structural constituent of ribosome encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex structural constituent of ribosome;(source:Araport11) IpcGene41406 ATCG01310.1 ribosomal protein L2 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex ribosomal protein L2;(source:Araport11) IpcGene41407 AT3G17465.1 ribosomal protein L3 plastid encodes a putative L3 ribosomal protein targeted to the plastid. ribosomal protein L3 plastid;(source:Araport11) IpcGene41408 AT3G13120.3 0 0 Ribosomal protein S10p/S20e family protein;(source:Araport11) IpcGene41409 AT4G02930.1 GTP binding Elongation factor Tu family protein 0 GTP binding Elongation factor Tu family protein;(source:Araport11) IpcGene41410 AT1G62750.1 Translation elongation factor EFG/EF2 protein Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. Translation elongation factor EFG/EF2 protein;(source:Araport11) IpcGene41411 AT2G07675.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) IpcGene41413 AT5G24260.4 0 0 prolyl oligopeptidase family protein;(source:Araport11) IpcGene41414 AT1G22210.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) IpcGene41415 AT1G78580.4 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. trehalose-6-phosphate synthase;(source:Araport11) IpcGene41416 AT3G14130.3 0 0 Aldolase-type TIM barrel family protein;(source:Araport11) IpcGene41419 AT5G01220.2 0 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) IpcGene41424 AT1G42470.1 Patched family protein 0 Patched family protein;(source:Araport11) IpcGene41427 AT3G10130.1 SOUL heme-binding family protein 0 SOUL heme-binding family protein;(source:Araport11) IpcGene41429 AT1G04690.1 potassium channel beta subunit 1 0 potassium channel beta subunit 1;(source:Araport11) IpcGene41432 AT2G06025.6 0 0 Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11) IpcGene41433 AT5G19740.1 Peptidase M28 family protein LAMP is an AMP paralog that overlaps in expression within the vascular system. Along with LAMP it suppresses meristem activity within the peripheral zone of the shoot apical meristem. LAMP is localized to the endoplasmic reticulum. Peptidase M28 family protein;(source:Araport11) IpcGene41434 AT5G64840.1 general control non-repressible 5 member of GCN subfamily general control non-repressible 5;(source:Araport11) IpcGene41435 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) IpcGene41438 AT3G60880.2 dihydrodipicolinate synthase 1 Encodes a dihydropicolinate synthase involved in lysine biosynthesis. The enzyme is allosterically inhibited by lysine. It is predicted to localize to the cholorplast. dihydrodipicolinate synthase 1;(source:Araport11) Ipc07G0000310 AT4G38600.2 HEAT repeat ;HECT-domain (ubiquitin-transferase) encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. HECT ubiquitin protein ligase family protein KAK;(source:Araport11) Ipc07G0000300 AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway. dehydroquinate dehydratase, putative / shikimate dehydrogenase;(source:Araport11) Ipc07G0000290 AT1G65410.1 non-intrinsic ABC protein 11 Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11;(source:Araport11) Ipc07G0000280 AT2G29050.1 RHOMBOID-like 1 0 RHOMBOID-like 1;(source:Araport11) Ipc07G0000270 AT1G23800.1 aldehyde dehydrogenase 2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. aldehyde dehydrogenase 2B7;(source:Araport11) Ipc07G0000260 AT3G02875.1 Peptidase M20/M25/M40 family protein Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors. Peptidase M20/M25/M40 family protein;(source:Araport11) Ipc07G0000250 #N/A #N/A #N/A #N/A Ipc07G0000240 AT1G17160.1 pfkB-like carbohydrate kinase family protein RBSK is a plastid localized ribokinase involved in nucleoside metabolism. It is the only member of this gene family in Arabidopsis. pfkB-like carbohydrate kinase family protein;(source:Araport11) Ipc07G0000230 AT5G45720.2 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc07G0000220 AT3G48330.2 protein-l-isoaspartate methyltransferase 1 Encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination. protein-l-isoaspartate methyltransferase 1;(source:Araport11) IpcGene41459 AT1G55880.1 Pyridoxal-5'-phosphate-dependent enzyme family protein 0 Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) IpcGene41463 AT1G63680.3 0 Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. ALBINO OR PALE-GREEN 13;(source:Araport11) IpcGene41464 AT1G63680.3 0 Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. ALBINO OR PALE-GREEN 13;(source:Araport11) IpcGene41466 AT3G60790.1 F-box family protein 0 F-box family protein;(source:Araport11) IpcGene41467 AT1G73740.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) IpcGene41468 AT1G63680.3 0 Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. ALBINO OR PALE-GREEN 13;(source:Araport11) IpcGene41469 AT4G21850.2 methionine sulfoxide reductase B9 0 methionine sulfoxide reductase B9;(source:Araport11) IpcGene41470 AT3G08840.2 D-alanine--D-alanine ligase family 0 D-alanine-D-alanine ligase family;(source:Araport11) IpcGene41471 AT3G56450.1 alpha-soluble NSF attachment protein 1 member of alpha-SNAP Gene Family alpha-soluble NSF attachment protein 1;(source:Araport11) IpcGene41472 AT5G49910.1 chloroplast heat shock protein 70-2 Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile. chloroplast heat shock protein 70-2;(source:Araport11) IpcGene41473 AT2G36250.4 0 Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division. Tubulin/FtsZ family protein;(source:Araport11) IpcGene41474 #N/A #N/A #N/A #N/A IpcGene41475 AT5G45469.1 0 0 transmembrane protein;(source:Araport11) IpcGene41482 AT4G13430.1 isopropyl malate isomerase large subunit 1 Encodes a methylthioalkylmalate isomerase involved in glucosinolate biosynthesis. isopropyl malate isomerase large subunit 1;(source:Araport11) IpcGene41486 #N/A #N/A #N/A #N/A IpcGene41487 AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein 0 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11) IpcGene41489 AT5G56650.1 IAA-leucine resistant (ILR)-like 1 encodes a protein similar to IAA conjugate hydrolases. Enzyme assays with purified GST-tagged protein shows some activity in vitro but too low to be physiologically significant. IAA-leucine resistant (ILR)-like 1;(source:Araport11) IpcGene41493 AT1G76150.1 enoyl-CoA hydratase 2 Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves. enoyl-CoA hydratase 2;(source:Araport11) IpcGene41495 AT3G45300.1 isovaleryl-CoA-dehydrogenase Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. The mRNA is cell-to-cell mobile. isovaleryl-CoA-dehydrogenase;(source:Araport11) IpcGene41496 AT3G06810.1 acyl-CoA dehydrogenase-related Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation. The mRNA is cell-to-cell mobile. acyl-CoA dehydrogenase-like protein;(source:Araport11) IpcGene41497 AT3G21240.1 4-coumarate:CoA ligase 2 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. 4-coumarate:CoA ligase 2;(source:Araport11) IpcGene41498 AT3G62080.1 SNF7 family protein Encodes a charged multi-vesicular body protein (CHMP7) homolog, that is an ESCRT-III-related protein and functions in the endosomal sorting pathway in humans. The Brassica homolog has been shown to be involved in plant growth and leaf senescence. SNF7 family protein;(source:Araport11) IpcGene41501 AT4G05160.1 AMP-dependent synthetase and ligase family protein Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal β-oxidation steps of jasmonic acid biosynthesis. AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene41503 #N/A #N/A #N/A #N/A IpcGene41504 AT1G66120.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene41505 AT5G47720.3 Thiolase family protein Encodes a functional acetoacetyl-CoA thiolase that is functionally redundant with AACT2. Loss-of-function mutants show no apparent growth phenotypes. Thiolase family protein;(source:Araport11) IpcGene41508 #N/A #N/A #N/A #N/A IpcGene41512 AT2G38440.1 SCAR homolog 2 Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype. The mRNA is cell-to-cell mobile. SCAR homolog 2;(source:Araport11) IpcGene41513 AT3G12520.1 sulfate transporter 4;2 Encodes a sulfate transporter that in induced under sulfate limitation. sulfate transporter 4;(source:Araport11) IpcGene41514 #N/A #N/A #N/A #N/A IpcGene41516 AT3G62080.1 SNF7 family protein Encodes a charged multi-vesicular body protein (CHMP7) homolog, that is an ESCRT-III-related protein and functions in the endosomal sorting pathway in humans. The Brassica homolog has been shown to be involved in plant growth and leaf senescence. SNF7 family protein;(source:Araport11) IpcGene41521 AT1G64460.1 Protein kinase superfamily protein 0 phosphatidylinositol 4-kinase gamma-like protein;(source:Araport11) IpcGene41522 AT3G22200.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) IpcGene41524 AT2G22250.1 aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity. aspartate aminotransferase;(source:Araport11) IpcGene41526 AT3G52155.2 0 0 Phosphoglycerate mutase family protein;(source:Araport11) IpcGene41527 AT2G41700.1 ATP-binding cassette A1 0 ATP-binding cassette A1;(source:Araport11) IpcGene41529 AT3G10050.1 L-O-methylthreonine resistant 1 first enzyme in the biosynthetic pathway of isoleucine L-O-methylthreonine resistant 1;(source:Araport11) Ipc14G0018990 ATCG00430.1 photosystem II reaction center protein G Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. photosystem II reaction center protein G;(source:Araport11) Ipc14G0019020 ATCG00480.1 ATP synthase subunit beta chloroplast-encoded gene for beta subunit of ATP synthase ATP synthase subunit beta;(source:Araport11) Ipc14G0019010 ATCG00470.1 ATP synthase epsilon chain ATPase epsilon subunit ATP synthase epsilon chain;(source:Araport11) Ipc14G0019000 ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein;(source:Araport11) Ipc14G0018980 ATCG00420.1 NADH dehydrogenase subunit J Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion. NADH dehydrogenase subunit J;(source:Araport11) Ipc14G0018970 ATCG00380.1 chloroplast ribosomal protein S4 Chloroplast encoded ribosomal protein S4 chloroplast ribosomal protein S4;(source:Araport11) Ipc14G0018960 ATCG00360.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a protein required for photosystem I assembly and stability. In Chlamydomonas reinhardtii, this protein seems to act as a PSI specific chaperone facilitating the assembly of the complex by interacting with PsaA and PsaD. A loss of function mutation in tobacco leads to a loss of photosystem I. photosystem I assembly protein;(source:Araport11) Ipc14G0018950 ATCG00350.1 Photosystem I, PsaA/PsaB protein Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome. Photosystem I, PsaA/PsaB protein;(source:Araport11) Ipc14G0018940 ATCG00330.1 chloroplast ribosomal protein S14 30S chloroplast ribosomal protein S14 chloroplast ribosomal protein S14;(source:Araport11) Ipc14G0018930 ATCG00280.1 photosystem II reaction center protein C chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. photosystem II reaction center protein C;(source:Araport11) Ipc14G0018920 ATCG00190.1 RNA polymerase subunit beta Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution. RNA polymerase subunit beta;(source:Araport11) IpcGene41546 AT2G36990.1 RNApolymerase sigma-subunit F Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation. RNApolymerase sigma-subunit F;(source:Araport11) IpcGene41548 AT2G16440.1 Minichromosome maintenance (MCM2/3/5) family protein Regulates DNA replication via interaction with BICE1 and MCM7. Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) IpcGene41550 #N/A #N/A #N/A #N/A IpcGene41551 AT3G13682.1 LSD1-like2 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA. LSD1-like2;(source:Araport11) IpcGene41553 AT5G08680.1 ATP synthase alpha/beta family protein Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile. ATP synthase alpha/beta family protein;(source:Araport11) IpcGene41556 #N/A #N/A #N/A #N/A IpcGene41557 AT1G67710.1 response regulator 11 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Affects ABA-JA crosstalk. response regulator 11;(source:Araport11) IpcGene41558 AT5G67220.1 FMN-linked oxidoreductases superfamily protein 0 FMN-linked oxidoreductases superfamily protein;(source:Araport11) IpcGene41559 AT1G63970.1 isoprenoid F Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF isoprenoid F;(source:Araport11) IpcGene41561 AT5G08415.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) IpcGene41562 AT3G01500.4 0 Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells. carbonic anhydrase 1;(source:Araport11) IpcGene41563 AT4G11010.1 nucleoside diphosphate kinase 3 nucleoside diphosphate kinase 3 (ndpk3), located to the inter-membrane space in mitochondria nucleoside diphosphate kinase 3;(source:Araport11) IpcGene41565 AT2G24200.2 Cytosol aminopeptidase family protein 0 Cytosol aminopeptidase family protein;(source:Araport11) IpcGene41566 AT2G18040.1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds The mRNA is cell-to-cell mobile. peptidylprolyl cis/trans isomerase, NIMA-interacting 1;(source:Araport11) IpcGene41567 AT5G66360.2 Ribosomal RNA adenine dimethylase family protein Encodes a mitochondrial rRNA dimethylase. Ribosomal RNA adenine dimethylase family protein;(source:Araport11) IpcGene41568 AT3G13180.1 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein 0 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein;(source:Araport11) IpcGene41569 AT1G79470.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) IpcGene41573 AT4G37870.1 phosphoenolpyruvate carboxykinase 1 Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol. phosphoenolpyruvate carboxykinase 1;(source:Araport11) IpcGene41574 AT4G31920.1 response regulator 10 Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem. response regulator 10;(source:Araport11) IpcGene41575 AT5G10720.1 histidine kinase 5 member of Histidine Kinase histidine kinase 5;(source:Araport11) IpcGene41579 AT2G47430.1 Signal transduction histidine kinase Encodes a putative plasma membrane-bound hybrid histidine kinase and cytokinin sensor that is expressed within the female gametophyte. Signal transduction histidine kinase;(source:Araport11) IpcGene41583 AT3G57760.4 0 0 Protein kinase superfamily protein;(source:Araport11) IpcGene41584 AT4G19210.1 RNAse l inhibitor protein 2 member of RLI subfamily The mRNA is cell-to-cell mobile. RNAse l inhibitor protein 2;(source:Araport11) IpcGene41585 AT3G18640.3 0 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) IpcGene41588 AT1G49480.3 0 Encodes a nuclear-localized DNA-binding protein that interacts with ITN1 at the PM and nuclei in vivo and may regulate ITN Primes subcellular localization. related to vernalization1 1;(source:Araport11) IpcGene41590 AT5G61380.1 CCT motif -containing response regulator protein Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. The mRNA is cell-to-cell mobile. CCT motif -containing response regulator protein;(source:Araport11) IpcGene41592 AT2G39930.3 0 Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex. isoamylase 1;(source:Araport11) IpcGene41595 #N/A #N/A #N/A #N/A IpcGene41600 AT1G20480.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) IpcGene41601 AT2G17420.1 NADPH-dependent thioredoxin reductase A NADPH-dependent thioredoxin reductase, major cytosolic isoform The mRNA is cell-to-cell mobile. NADPH-dependent thioredoxin reductase A;(source:Araport11) IpcGene41602 AT4G19710.1 aspartate kinase-homoserine dehydrogenase ii Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase ii;(source:Araport11) IpcGene41603 AT5G37510.1 NADH-ubiquinone dehydrogenase, mitochondrial, putative Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. The mRNA is cell-to-cell mobile. NADH-ubiquinone dehydrogenase;(source:Araport11) IpcGene41605 AT5G53460.3 NADH-dependent glutamate synthase 1 NADH-dependent glutamate synthase The mRNA is cell-to-cell mobile. NADH-dependent glutamate synthase 1;(source:Araport11) IpcGene41607 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) IpcGene41609 AT5G35750.1 histidine kinase 2 Encodes histidine kinase AHK2. histidine kinase 2;(source:Araport11) Ipc14G0018890 AT5G37510.1 NADH-ubiquinone dehydrogenase, mitochondrial, putative Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. The mRNA is cell-to-cell mobile. NADH-ubiquinone dehydrogenase;(source:Araport11) Ipc14G0018880 AT2G07734.1 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 0 Alpha-L RNA-binding motif/Ribosomal protein S4 family protein;(source:Araport11) Ipc14G0018870 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) IpcGene41613 AT2G17820.1 histidine kinase 1 Encodes a member of the histidine kinase family. histidine kinase 1;(source:Araport11) IpcGene41614 AT1G67940.1 non-intrinsic ABC protein 3 member of NAP subfamily The mRNA is cell-to-cell mobile. non-intrinsic ABC protein 3;(source:Araport11) IpcGene41615 #N/A #N/A #N/A #N/A IpcGene41616 AT2G46560.3 0 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) IpcGene41618 AT1G66340.1 Signal transduction histidine kinase, hybrid-type, ethylene sensor Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis. Signal transduction histidine kinase, hybrid-type, ethylene sensor;(source:Araport11) IpcGene41621 AT3G24090.1 glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases Encodes a glutamine-fructose-6-phosphate transaminase that likely plays a role in UDP-N-acetylglucosamine biosynthesis. putative glucosamine-fructose-6-phosphate aminotransferase;(source:Araport11) IpcGene41623 AT5G35750.1 histidine kinase 2 Encodes histidine kinase AHK2. histidine kinase 2;(source:Araport11) IpcGene41626 AT2G07675.1 Ribosomal protein S12/S23 family protein 0 Ribosomal protein S12/S23 family protein;(source:Araport11) IpcGene41630 AT1G01790.2 0 Encodes a member of the cation/proton antiporters-2 antiporter superfamily, the K efflux antiporter KEA1 that is localized to the chloroplast envelope. K+ efflux antiporter 1;(source:Araport11) IpcGene41640 AT1G08540.1 RNApolymerase sigma subunit 2 Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light. RNApolymerase sigma subunit 2;(source:Araport11) IpcGene41641 AT5G15140.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) IpcGene41643 AT3G47750.1 ATP binding cassette subfamily A4 member of ATH subfamily ATP binding cassette subfamily A4;(source:Araport11) IpcGene41645 AT3G26760.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) IpcGene41646 AT2G39800.3 delta1-pyrroline-5-carboxylate synthase 1 encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner. Mutants are defective in pollen development. delta1-pyrroline-5-carboxylate synthase 1;(source:Araport11) IpcGene41647 AT1G29030.1 Apoptosis inhibitory protein 5 (API5) 0 Apoptosis inhibitory protein 5 (API5);(source:Araport11) IpcGene41648 AT3G23940.1 dehydratase family Encodes a member of the dihydroxyacid dehydrates family of proteins that encode enzymes involved in branched chain amino acid biosynthesis. Loss of function mutations have significantly reduced transmission and fertility due to defects in male and female gametophyte development and embryo lethality. Mutants have increased sensitivity to abiotic stressors which may be partially compensated by addition of amino acids to the growth medium. dehydratase family;(source:Araport11) IpcGene41652 AT1G21680.1 DPP6 N-terminal domain-like protein 0 DPP6 N-terminal domain-like protein;(source:Araport11) IpcGene41655 AT1G68290.1 endonuclease 2 Encodes an endonuclease ENDO2. ENDO2 purified from transgenic Arabidopsis digests RNA, ssDNA, and dsDNA, with a substrate preference for ssDNA and RNA. ENDO2 produced and purified from Nicotiana benthamiana expression showed no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, in vitro. endonuclease 2;(source:Araport11) IpcGene41656 AT3G16150.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) IpcGene41657 AT5G60600.5 0 Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP+ reductase.The mRNA is cell-to-cell mobile. 4-hydroxy-3-methylbut-2-enyl diphosphate synthase;(source:Araport11) IpcGene41659 AT1G01050.2 0 Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. pyrophosphorylase 1;(source:Araport11) IpcGene41662 AT3G46100.1 Histidyl-tRNA synthetase 1 histidyl-tRNA synthetase Histidyl-tRNA synthetase 1;(source:Araport11) IpcGene41663 AT2G47020.1 Peptide chain release factor 1 0 Peptide chain release factor 1;(source:Araport11) IpcGene41664 AT5G64150.1 RNA methyltransferase family protein 0 RNA methyltransferase family protein;(source:Araport11) IpcGene41665 AT1G47271.1 Cystathionine beta-synthase (CBS) family protein 0 Cystathionine beta-synthase (CBS) family protein;(source:Araport11) IpcGene41666 #N/A #N/A #N/A #N/A IpcGene41667 AT5G19550.1 aspartate aminotransferase 2 Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. The mRNA is cell-to-cell mobile. aspartate aminotransferase 2;(source:Araport11) IpcGene41671 AT5G63290.1 Radical SAM superfamily protein CPO3 (At5g63290) has not been characterized per se, but is a homolog of the CPDH/HEMN (see review by Layer et al, 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al, 2010), but not yet from plants. Radical SAM superfamily protein;(source:Araport11) IpcGene41673 AT1G09570.3 0 Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation. phytochrome A;(source:Araport11) IpcGene41674 AT1G63440.1 heavy metal atpase 5 The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed. heavy metal atpase 5;(source:Araport11) IpcGene41675 AT3G24200.2 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) IpcGene41676 AT5G64840.1 general control non-repressible 5 member of GCN subfamily general control non-repressible 5;(source:Araport11) IpcGene41678 AT2G32150.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) IpcGene41679 AT3G13110.1 serine acetyltransferase 2;2 Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. serine acetyltransferase 2;(source:Araport11) Ipc12G0001810 AT3G57587.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc12G0001820 AT1G80680.1 SUPPRESSOR OF AUXIN RESISTANCE 3 Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens. SUPPRESSOR OF AUXIN RESISTANCE 3;(source:Araport11) Ipc12G0001830 #N/A #N/A #N/A #N/A Ipc12G0001840 AT1G15860.2 Domain of unknown function (DUF298) 0 defective in cullin neddylation protein (DUF298);(source:Araport11) Ipc12G0001850 AT1G80690.1 PPPDE putative thiol peptidase family protein 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc12G0001860 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0001870 AT5G25160.1 zinc finger protein 3 Encodes a zinc finger protein containing only a single zinc finger. zinc finger protein 3;(source:Araport11) Ipc12G0001880 AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein Deadenylase. Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0001890 AT2G32060.3 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc12G0001900 AT2G25110.1 stromal cell-derived factor 2-like protein precursor Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity. stromal cell-derived factor 2-like protein precursor;(source:Araport11) Ipc12G0001910 AT1G74360.1 Leucine-rich repeat protein kinase family protein NILR1 encodes a serine/threonine kinase involved in defense response to nematodes. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0001920 AT5G62850.1 Nodulin MtN3 family protein Encodes a protein that is expressed in vegetative cells of pollen. A member of the SWEET sucrose efflux transporter family proteins. Nodulin MtN3 family protein;(source:Araport11) Ipc12G0001930 AT1G80810.5 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc12G0001940 AT5G47690.1 binding One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. binding protein;(source:Araport11) Ipc12G0001950 AT1G80810.5 0 One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc12G0001960 AT1G15950.3 0 Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.The mRNA is cell-to-cell mobile. cinnamoyl coa reductase 1;(source:Araport11) Ipc12G0001970 AT1G33680.1 KH domain-containing protein 0 KH domain-containing protein;(source:Araport11) Ipc12G0001980 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0001990 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0002000 AT2G46765.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0002010 AT1G02900.1 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1;(source:Araport11) Ipc12G0002020 AT1G80830.2 0 Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants. natural resistance-associated macrophage protein 1;(source:Araport11) Ipc12G0002030 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc12G0002040 AT5G25110.1 CBL-interacting protein kinase 25 member of AtCIPKs CBL-interacting protein kinase 25;(source:Araport11) Ipc12G0002050 #N/A #N/A #N/A #N/A Ipc12G0002060 AT1G06670.2 0 nuclear DEIH-box helicase (NIH) encoding a putative RNA and/or DNA helicase homologous to a group of nucleic acid helicases from the DEAD/H family with nuclear DEIH-box helicase (NIH) distinct N- and C-terminal regions that differ from animal DEIH proteinsThe mRNA is cell-to-cell mobile. nuclear DEIH-boxhelicase;(source:Araport11) Ipc12G0002070 AT1G27340.1 Galactose oxidase/kelch repeat superfamily protein Encodes a putative F-box protein that is involved in the regulation of leaf morphology. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc12G0002080 #N/A #N/A #N/A #N/A Ipc12G0002090 AT5G57110.3 0 Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane. autoinhibited Ca2+ -ATPase, isoform 8;(source:Araport11) Ipc12G0002100 AT1G80840.1 WRKY DNA-binding protein 40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 40;(source:Araport11) Ipc12G0002110 AT5G57970.2 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc12G0002120 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0002130 AT3G06130.2 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc12G0002140 AT1G80860.2 phospholipid N-methyltransferase Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine. phospholipid N-methyltransferase;(source:Araport11) Ipc12G0002150 AT3G50570.2 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0002160 AT2G07680.3 0 Encodes ABCC13/MRP11, a member of the multidrug resistance associated protein MRP/ABCC subfamily. Its expression is induced by gibberellic acid and downregulated by naphthalene acetic acid, abscisic acid, and zeatin. multidrug resistance-associated protein 11;(source:Araport11) Ipc12G0002170 AT1G19780.1 cyclic nucleotide gated channel 8 Encodes a member of the cyclic nucleotide gated channel (CNGC) family that is essential for male reproductive fertility. cyclic nucleotide gated channel 8;(source:Araport11) Ipc12G0002180 AT1G16010.3 magnesium transporter 2 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 2;(source:Araport11) Ipc12G0002190 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc12G0002200 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc12G0002210 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc12G0002220 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc12G0002230 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc12G0002240 AT5G48930.1 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase;(source:Araport11) Ipc12G0002250 AT2G16250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc12G0002260 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0002270 AT4G15200.1 formin 3 Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes. formin 3;(source:Araport11) Ipc12G0002280 AT1G16030.1 heat shock protein 70B 0 heat shock protein 70B;(source:Araport11) Ipc12G0002290 AT2G24130.2 0 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc12G0002300 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0002310 AT2G15020.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0002320 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0002330 AT3G59690.2 0 0 IQ-domain 13;(source:Araport11) Ipc12G0002340 AT3G59690.2 0 0 IQ-domain 13;(source:Araport11) Ipc12G0002350 AT1G55000.3 peptidoglycan-binding LysM domain-containing protein 0 peptidoglycan-binding LysM domain-containing protein;(source:Araport11) Ipc12G0002360 AT5G66290.2 0 0 hypothetical protein;(source:Araport11) Ipc12G0002370 AT5G37230.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0002380 #N/A #N/A #N/A #N/A Ipc12G0002390 AT1G10570.3 0 Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation. Cysteine proteinases superfamily protein;(source:Araport11) Ipc12G0002400 AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc12G0002410 AT1G16040.3 0 0 phosphatidylinositol-glycan biosynthesis class F-like protein;(source:Araport11) Ipc12G0002420 AT5G57820.1 zinc ion binding 0 zinc ion binding protein;(source:Araport11) Ipc12G0002430 AT2G24100.1 0 0 ATP-dependent DNA helicase;(source:Araport11) Ipc12G0002440 AT1G16060.1 ARIA-interacting double AP2 domain protein Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth. ARIA-interacting double AP2 domain protein;(source:Araport11) Ipc12G0002450 AT1G19170.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc12G0002460 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc12G0002470 AT2G31960.5 0 encodes a protein similar to callose synthase glucan synthase-like 3;(source:Araport11) Ipc12G0002480 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0002490 AT1G16400.1 cytochrome P450, family 79, subfamily F, polypeptide 2 Encodes cytochrome P450 CYP79F2. cytochrome P450, family 79, subfamily F, polypeptide 2;(source:Araport11) Ipc12G0002500 AT3G50890.1 homeobox protein 28 0 homeobox protein 28;(source:Araport11) Ipc12G0002510 AT4G17250.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0002520 AT1G16180.2 Serinc-domain containing serine and sphingolipid biosynthesis protein 0 Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11) Ipc12G0002530 AT1G79640.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc12G0002540 AT5G57800.1 Fatty acid hydroxylase superfamily encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. The mRNA is cell-to-cell mobile. Fatty acid hydroxylase superfamily;(source:Araport11) Ipc12G0002550 AT3G12660.1 FASCICLIN-like arabinogalactan protein 14 precursor fasciclin-like arabinogalactan-protein, family (FLA14) FASCICLIN-like arabinogalactan protein 14 precursor;(source:Araport11) Ipc12G0002560 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0002570 #N/A #N/A #N/A #N/A Ipc12G0002580 AT1G67940.1 non-intrinsic ABC protein 3 member of NAP subfamily The mRNA is cell-to-cell mobile. non-intrinsic ABC protein 3;(source:Araport11) Ipc12G0002590 AT5G43150.1 0 0 elongation factor;(source:Araport11) Ipc12G0002600 AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein 0 Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11) Ipc12G0002610 AT2G39090.2 tetratricopeptide repeat (TPR)-containing protein 0 tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc12G0002620 AT4G34400.2 0 B3-type transcription factor, which promotes floral transition and is repressed by FLC/SVP and promoted by SOC1. AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc12G0002630 AT3G14250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc12G0002640 AT2G26780.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc12G0002650 AT3G21240.1 4-coumarate:CoA ligase 2 encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. 4-coumarate:CoA ligase 2;(source:Araport11) Ipc12G0002660 AT3G50820.1 photosystem II subunit O-2 Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII. photosystem II subunit O-2;(source:Araport11) Ipc12G0002670 AT5G51070.1 Clp ATPase ATP-dependent Clp protease regulatory subunit The mRNA is cell-to-cell mobile. Clp ATPase;(source:Araport11) Ipc12G0002680 AT5G07400.1 forkhead-associated domain-containing protein / FHA domain-containing protein 0 forkhead-associated domain-containing protein / FHA domain-containing protein;(source:Araport11) Ipc12G0002690 AT1G09730.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Along with SPF2, its activity is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc12G0002700 AT5G28730.1 0 0 nuclease;(source:Araport11) Ipc12G0002710 AT5G47910.1 respiratory burst oxidase homologue D NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. The mRNA is cell-to-cell mobile. respiratory burst oxidase homologue D;(source:Araport11) Ipc12G0002720 AT5G51060.1 NADPH/respiratory burst oxidase protein D RHD2 (along with RHD3 and RHD4) is required for normal root hair elongation. Has NADPH oxidase activity. Gene is expressed in the elongation and differention zone in trichoblasts and elongating root hairs. RDH2 is localized to the growing tips of root hair cells. It is required for the production of reactive oxygen species in response to extracellular ATP stimulus. The increase in ROS production stimulates Ca2+ influx. NADPH/respiratory burst oxidase protein D;(source:Araport11) Ipc12G0002730 AT4G36020.3 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc12G0002740 AT5G48050.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc12G0002750 AT1G56680.2 0 0 Chitinase family protein;(source:Araport11) Ipc12G0002760 AT1G43170.4 ribosomal protein 1 Encodes a cytoplasmic ribosomal protein. The mRNA is cell-to-cell mobile. ribosomal protein 1;(source:Araport11) Ipc12G0002770 AT5G47910.1 respiratory burst oxidase homologue D NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. The mRNA is cell-to-cell mobile. respiratory burst oxidase homologue D;(source:Araport11) Ipc12G0002780 AT5G07380.4 0 0 hypothetical protein;(source:Araport11) Ipc12G0002790 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc12G0002800 AT5G61750.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc12G0002810 AT5G61760.2 0 Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2). Acts redundantly with ATIPK2alpha during pollen development, pollen tube guidance and embryogenesis. inositol polyphosphate kinase 2 beta;(source:Araport11) Ipc12G0002820 AT5G07360.3 0 0 Amidase family protein;(source:Araport11) Ipc12G0002830 AT5G07350.1 TUDOR-SN protein 1 RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2. TUDOR-SN protein 1;(source:Araport11) Ipc12G0002840 AT5G61790.1 calnexin 1 0 calnexin 1;(source:Araport11) Ipc12G0002850 AT1G07390.2 receptor like protein 1 0 receptor like protein 1;(source:Araport11) Ipc12G0002860 #N/A #N/A #N/A #N/A Ipc12G0002870 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc12G0002880 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc12G0002890 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002900 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002910 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002920 AT2G42950.2 0 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc12G0002930 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc12G0002940 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002950 AT5G07330.1 0 0 NFU1 iron-sulfur cluster protein;(source:Araport11) Ipc12G0002960 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc12G0002970 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002980 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0002990 AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc12G0003000 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003010 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003020 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003030 AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33 encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. arginine/serine-rich zinc knuckle-containing protein 33;(source:Araport11) Ipc12G0003040 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003050 AT1G74180.2 0 0 receptor like protein 14;(source:Araport11) Ipc12G0003060 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc12G0003070 AT1G09020.1 homolog of yeast sucrose nonfermenting 4 Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity. sucrose nonfermenting-like protein;(source:Araport11) Ipc12G0003080 #N/A #N/A #N/A #N/A Ipc12G0003090 AT5G61800.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0003100 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0003110 AT4G21660.3 0 0 proline-rich spliceosome-associated (PSP) family protein;(source:Araport11) Ipc12G0003120 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0003130 AT5G61800.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc12G0003140 AT1G55325.2 RNA polymerase II transcription mediators Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. RNA polymerase II transcription mediator;(source:Araport11) Ipc12G0003150 AT5G59880.1 actin depolymerizing factor 3 Encodes actin depolymerizing factor 3 (ADF3). actin depolymerizing factor 3;(source:Araport11) Ipc12G0003160 AT4G36080.3 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases Component of the SPT module of the SAGA complex. phosphotransferases/inositol or phosphatidylinositol kinase;(source:Araport11) Ipc12G0003170 AT3G16540.1 DegP protease 11 Encodes a putative DegP protease. DegP protease 11;(source:Araport11) Ipc12G0003180 AT5G51050.1 Mitochondrial substrate carrier family protein Encodes an APC isoform in Arabidopsis, a calcium-dependent mitochondrial ATP-Mg/Pi transporter. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc12G0003190 AT1G55210.2 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc12G0003200 AT1G29110.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc12G0003210 AT1G04170.2 0 protein synthesis initiation factor eIF2 gammaThe mRNA is cell-to-cell mobile. eukaryotic translation initiation factor 2 gamma subunit;(source:Araport11) Ipc12G0003220 AT5G51050.1 Mitochondrial substrate carrier family protein Encodes an APC isoform in Arabidopsis, a calcium-dependent mitochondrial ATP-Mg/Pi transporter. Mitochondrial substrate carrier family protein;(source:Araport11) Ipc12G0003230 AT3G57470.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc12G0003240 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003250 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc12G0003260 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc12G0003270 AT2G12880.1 Zinc knuckle (CCHC-type) family protein 0 Zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc12G0003280 AT5G48630.1 Cyclin family protein 0 Cyclin family protein;(source:Araport11) Ipc12G0003290 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc12G0003300 AT5G61820.2 0 0 stress up-regulated Nod 19 protein;(source:Araport11) Ipc12G0003310 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0015130 AT4G23790.1 TRICHOME BIREFRINGENCE-LIKE 24 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 24;(source:Araport11) Ipc10G0000320 AT4G31940.1 cytochrome P450, family 82, subfamily C, polypeptide 4 The gene encodes a cytochrome P450 enzyme, CYP82C. It is involved in the early Fe deficiency response.CYP82C4 hydroxylates fraxetin to generate sideretin (5-hydroxyfraxetin). Fraxetin and sideretin are catecholic coumarins secreted into the rhizosphere under conditions of low iron availability and help mobilize this nutrient from insoluble iron(III) pools in the soil.The mRNA is cell-to-cell mobile. cytochrome P450, family 82, subfamily C, polypeptide 4;(source:Araport11) Ipc10G0000330 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0000340 AT3G25130.1 0 0 acidic leucine-rich nuclear phosphoprotein 32 family B protein;(source:Araport11) Ipc10G0000350 AT4G02210.2 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc10G0000360 AT1G11475.1 RNA polymerases N / 8 kDa subunit Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB10. RNA polymerases N / 8 kDa subunit;(source:Araport11) Ipc10G0000370 AT4G27860.2 vacuolar iron transporter (VIT) family protein 0 vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc10G0000380 AT3G25110.1 fatA acyl-ACP thioesterase Encodes a FatA acyl-ACP thioesterase fatA acyl-ACP thioesterase;(source:Araport11) Ipc10G0000390 AT5G48660.1 B-cell receptor-associated protein 31-like 0 B-cell receptor-associated protein 31-like protein;(source:Araport11) Ipc10G0000400 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0000410 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0000420 AT3G07180.1 GPI transamidase component PIG-S-related 0 GPI transamidase component PIG-S-like protein;(source:Araport11) Ipc10G0000430 AT3G07170.1 Sterile alpha motif (SAM) domain-containing protein 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc10G0000440 AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 2 0 xyloglucan endotransglucosylase/hydrolase 2;(source:Araport11) Ipc10G0000450 AT5G51080.3 RNase H family protein 0 RNase H family protein;(source:Araport11) Ipc10G0000460 AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants. zinc finger (C3HC4-type RING finger) family protein;(source:Araport11) Ipc10G0000470 #N/A #N/A #N/A #N/A Ipc10G0000480 AT4G26680.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0000490 AT4G26680.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0000500 AT4G18530.3 0 0 lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707);(source:Araport11) Ipc10G0000510 AT3G25030.4 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0000520 AT3G24880.3 0 Encodes a nuclear localized protein of unknown function that interacts with components of the NuA4 histone acetyltransferase complex. I Helicase/SANT-associated, DNA binding protein;(source:Araport11) Ipc10G0000530 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc10G0000540 AT5G48740.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0000550 AT3G24830.1 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc10G0000560 AT2G32720.1 cytochrome B5 isoform B Participates with ELO2 in VLCFA synthesis. cytochrome B5 isoform B;(source:Araport11) Ipc10G0000570 AT3G05680.2 embryo defective 2016 Encodes a splicing/methylation factor that is a homologue to the mammalian VIRILIZER, is member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. Analysis of transcriptional profiles of the vir-1 mutant suggests that VIR is likely involved in regulation of gene expression, but the function of VIR is rather general than specific and knock-down of VIR does not affect overall splicing rates. embryo defective 2016;(source:Araport11) Ipc10G0000580 AT5G48820.1 inhibitor/interactor with cyclin-dependent kinase Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. inhibitor/interactor with cyclin-dependent kinase;(source:Araport11) Ipc10G0000590 AT2G32700.6 LEUNIG_homolog Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. Involved in cell wall modifications necessary for mucilage extrusion and mediates aluminium sensitivity through PECTIN METHYLESTERASE46-modulated root cell wall pectin methylesterification. LEUNIG-like protein;(source:Araport11) Ipc10G0000600 AT2G07771.2 Cytochrome C assembly protein 0 Cytochrome C assembly protein;(source:Araport11) Ipc10G0000610 AT3G07090.2 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc10G0000620 AT3G07080.1 EamA-like transporter family 0 EamA-like transporter family;(source:Araport11) Ipc10G0000630 AT3G07070.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0000640 AT3G24715.3 0 HCR1 belongs to the B4 group of Raf-like MAPKKKs. It corresponds to a root hydraulic pressure QTL between Col-0 and Bur-0 accessions and appears to contribute to variation in root pressure in different haplotypes. It is involved in potassium-dependent response to hypoxia. kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc10G0000650 AT1G48120.1 hydrolases;protein serine/threonine phosphatases Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11) Ipc10G0000660 AT3G07030.3 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc10G0000670 AT5G45060.2 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0000680 AT5G48840.1 homolog of bacterial PANC Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate. pantoate-beta-alanine ligase;(source:Araport11) Ipc10G0000690 AT1G04760.2 0 member of Synaptobrevin -like protein family vesicle-associated membrane protein 726;(source:Araport11) Ipc10G0000700 AT4G13200.1 0 Plastoglobular protein which is involved in chloroplast function and thylakoid formation. hypothetical protein;(source:Araport11) Ipc10G0000710 AT3G27110.4 0 PGM48 is a member of a plant specific clade of metallo-endopeptidase proteins. It is found in plastoglobules. Analysis of over-expression and loss of function phenotypes suggests PGM48 may have a role in positively regulating senescence. Peptidase family M48 family protein;(source:Araport11) Ipc10G0000720 AT2G20180.6 0 Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression. phytochrome interacting factor 3-like 5;(source:Araport11) Ipc10G0000730 AT2G20190.1 CLIP-associated protein Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability. CLIP-associated protein;(source:Araport11) Ipc10G0000740 AT3G57750.2 Protein kinase superfamily protein Encodes a pseudokinase that likely acts as a decoy to lure the P. syringae effector acetyltransferase HopZ1a to the ZAR1-resistance complex, resulting in effector-triggered immunity (ETI) activation. It is acetylated by HopZ1a. Protein kinase superfamily protein;(source:Araport11) Ipc10G0000750 #N/A #N/A #N/A #N/A Ipc10G0000760 AT2G20210.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc10G0000770 AT5G41540.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0000780 AT2G20230.1 Tetraspanin family protein 0 Tetraspanin family protein;(source:Araport11) Ipc10G0000790 AT4G28760.2 Protein of unknown function (DUF3741) 0 methyl-coenzyme M reductase II subunit gamma, putative (DUF3741);(source:Araport11) Ipc10G0000800 AT3G44480.2 0 Encodes a TIR-NB-LRR R-protein RPP1 that confers resistance to Peronospora parasitica (downy mildew). Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc10G0000810 AT1G61560.3 Seven transmembrane MLO family protein A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of cotyledons, young leaves and petals, in mature rosette leaves, in anthers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc10G0000820 AT2G20300.1 Protein kinase superfamily protein Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs. Protein kinase superfamily protein;(source:Araport11) Ipc10G0000830 AT1G10390.3 0 DRA2 is a homolog of mammalian nucleoporin 98 and a likely component of the nuclear pore complex in Arabidopsis. It positively participates in the control of the hypocotyl elongation response to plant proximity and control of shade induced gene expression. Nucleoporin autopeptidase;(source:Araport11) Ipc10G0000840 AT3G07030.3 0 0 Alba DNA/RNA-binding protein;(source:Araport11) Ipc10G0000850 AT3G59100.1 glucan synthase-like 11 encodes a protein similar to callose synthase glucan synthase-like 11;(source:Araport11) Ipc10G0000860 AT4G27660.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0000870 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc10G0000880 AT1G04120.3 0 encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5;(source:Araport11) Ipc10G0000890 AT1G04120.1 multidrug resistance-associated protein 5 encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5;(source:Araport11) Ipc10G0000900 AT1G70190.2 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like 0 ribosomal protein L7/L12 domain-containing protein;(source:Araport11) Ipc10G0000910 AT5G43960.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc10G0000920 AT5G43970.1 translocase of outer membrane 22-V Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion. translocase of outer membrane 22-V;(source:Araport11) Ipc10G0000930 AT5G43990.5 SET-domain containing protein lysine methyltransferase family protein Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc10G0000940 AT3G04380.3 0 Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. SET-domain containing protein lysine methyltransferase family protein;(source:Araport11) Ipc10G0000950 AT3G14110.2 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0000960 AT3G04400.1 Ribosomal protein L14p/L23e family protein 0 Ribosomal protein L14p/L23e family protein;(source:Araport11) Ipc10G0000970 AT4G28610.1 phosphate starvation response 1 Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots. phosphate starvation response 1;(source:Araport11) Ipc10G0000980 AT5G44030.1 cellulose synthase A4 Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. The mRNA is cell-to-cell mobile. cellulose synthase A4;(source:Araport11) Ipc10G0000990 AT1G09060.4 0 JMJ24 is a nuclear localized JmjC domain containing protein. It has been shown to bind to transcribed regions AtSN1 and solo LTR and the promoter of SDC. JMJ24 appears to regulate basal levels of transcription of silenced loci in part by controlling methylation in heterochromatic regions. JmjC domain protein JMJ24;(source:Araport11) Ipc10G0001000 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc10G0001010 AT5G46050.1 peptide transporter 3 Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies. peptide transporter 3;(source:Araport11) Ipc10G0001020 AT2G20420.1 ATP citrate lyase (ACL) family protein 0 ATP citrate lyase (ACL) family protein;(source:Araport11) Ipc10G0001030 AT4G28570.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc10G0001040 AT4G28570.2 0 0 Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11) Ipc10G0001050 AT5G12180.1 calcium-dependent protein kinase 17 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17;(source:Araport11) Ipc10G0001060 AT5G44070.1 phytochelatin synthase 1 (PCS1) Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+. The mRNA is cell-to-cell mobile. phytochelatin synthase 1 (PCS1);(source:Araport11) Ipc10G0001070 AT2G33460.1 ROP-interactive CRIB motif-containing protein 1 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis. ROP-interactive CRIB motif-containing protein 1;(source:Araport11) Ipc10G0001080 AT2G44860.2 Ribosomal protein L24e family protein 0 Ribosomal protein L24e family protein;(source:Araport11) Ipc10G0001090 AT4G27090.1 Ribosomal protein L14 0 Ribosomal protein L14;(source:Araport11) Ipc10G0001100 AT3G23340.1 casein kinase I-like 10 Member of CKL gene family (CKL-C group). casein kinase I-like 10;(source:Araport11) Ipc10G0001110 AT2G18760.7 0 0 chromatin remodeling 8;(source:Araport11) Ipc10G0001120 AT4G11660.1 winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc10G0001130 AT5G27270.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0001140 AT1G25210.1 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 0 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11) Ipc10G0001150 AT3G19780.4 0 0 hypothetical protein;(source:Araport11) Ipc10G0001160 AT3G57980.2 0 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc10G0001170 AT4G28530.1 NAC domain containing protein 74 Member of NAC family of transcription factors. Along with NAC2, KIR1 positively regulates programmed cell death of stigmatic tissue. NAC domain containing protein 74;(source:Araport11) Ipc10G0001180 AT2G25510.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0001190 AT3G56200.1 Transmembrane amino acid transporter family protein Encodes a putative amino acid transporter. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc10G0001200 AT3G21280.2 0 Encodes a ubiquitin-specific protease. ubiquitin carboxyl-terminal hydrolase;(source:Araport11) Ipc10G0001210 AT5G57340.2 0 0 ras guanine nucleotide exchange factor Q-like protein;(source:Araport11) Ipc10G0001220 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0001230 AT1G06210.1 ENTH/VHS/GAT family protein 0 ENTH/VHS/GAT family protein;(source:Araport11) Ipc10G0001240 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0001250 AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. Structural maintenance of chromosomes (SMC) family protein;(source:Araport11) Ipc10G0001260 AT2G20515.1 0 0 pollen Ole e I family allergen protein;(source:Araport11) Ipc10G0001270 AT2G22600.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc10G0001280 AT3G56080.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc10G0001290 AT2G31190.2 Protein of unknown function, DUF647 Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport. root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11) Ipc10G0001300 AT3G23230.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc10G0001310 AT2G42440.1 Lateral organ boundaries (LOB) domain family protein 0 Lateral organ boundaries (LOB) domain family protein;(source:Araport11) Ipc10G0001320 AT5G60170.2 RNA binding (RRM/RBD/RNP motifs) family protein 0 RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0001330 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc10G0001340 AT3G03640.1 beta glucosidase 25 Encodes beta-glucosidase (GLUC). beta glucosidase 25;(source:Araport11) Ipc10G0001350 AT3G54160.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc10G0001360 AT1G21360.1 glycolipid transfer protein 2 0 glycolipid transfer protein 2;(source:Araport11) Ipc10G0001370 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc10G0001410 AT4G31080.1 Protein of unknown function (DUF2296) Encodes one of two LUNAPARK proteins in Arabidopsis. Both LNPA and LNPB are predominantly distributed throughout the ER, but not preferentially localized at the three-way junctions. Mutation of both LNPA and LNPB together caused the cortical ER to develop poor ER cisternae and a less dense tubular network. integral membrane metal-binding family protein (DUF2296);(source:Araport11) Ipc10G0001380 AT1G66235.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc10G0001390 AT2G42430.1 lateral organ boundaries-domain 16 LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation. lateral organ boundaries-domain 16;(source:Araport11) Ipc10G0001400 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0001420 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc10G0001430 AT5G57270.5 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc10G0001440 #N/A #N/A #N/A #N/A Ipc10G0001450 AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc10G0001460 ATCG00490.1 ribulose-bisphosphate carboxylases large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. ribulose-bisphosphate carboxylase;(source:Araport11) Ipc10G0001470 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0001480 AT3G04670.1 WRKY DNA-binding protein 39 member of WRKY Transcription Factor; Group II-d WRKY DNA-binding protein 39;(source:Araport11) Ipc10G0001490 AT3G49100.2 0 0 Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11) Ipc10G0001500 AT1G08230.2 Transmembrane amino acid transporter family protein Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc10G0001510 AT1G08230.6 0 Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc10G0001520 AT1G08770.1 prenylated RAB acceptor 1.E 0 prenylated RAB acceptor 1.E;(source:Araport11) Ipc10G0001530 AT2G30580.2 0 Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance. DREB2A-interacting protein 2;(source:Araport11) Ipc10G0001540 AT1G06780.1 galacturonosyltransferase 6 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase 6;(source:Araport11) Ipc10G0001550 AT1G47720.1 Primosome PriB/single-strand DNA-binding Encodes an organellar single-strand DNA binding protein, located in mitochondria, controls the stoichiometry of alternative mitochondrial DNA forms generated by homologous recombination. Primosome PriB/single-strand DNA-binding protein;(source:Araport11) Ipc10G0001560 AT5G44785.1 organellar single-stranded DNA binding protein 3 Organellar Single-stranded DNA Binding protein. Decreases MMEJ on long ssDNA templates. organellar single-stranded DNA binding protein 3;(source:Araport11) Ipc10G0001570 AT4G02580.1 NADH-ubiquinone oxidoreductase 24 kDa subunit, putative 0 NADH-ubiquinone oxidoreductase 24 kDa subunit;(source:Araport11) Ipc10G0001580 AT4G02610.1 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc10G0001590 AT2G38840.1 Guanylate-binding family protein 0 Guanylate-binding family protein;(source:Araport11) Ipc10G0001600 AT3G54610.1 histone acetyltransferase of the GNAT family 1 Encodes a histone acetyltransferase that plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In addition, it is involved in stem cuticular wax accumulation by modulating CER3 expression via H3K9/14 acetylation. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14. histone acetyltransferase of the GNAT family 1;(source:Araport11) Ipc10G0001610 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc10G0001620 AT3G22970.1 Protein of unknown function (DUF506) 0 hypothetical protein (DUF506);(source:Araport11) Ipc10G0001630 AT5G58740.1 HSP20-like chaperones superfamily protein 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc10G0001640 #N/A #N/A #N/A #N/A Ipc10G0001650 AT3G63400.2 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc10G0001660 AT1G03055.1 0 Encodes the ortholog of rice D27. It is plastid-localized and is required for the inhibition of secondary bud outgrowth and operates on a nonmobile precursor upstream of MAX1 in the SL biosynthesis pathway. beta-carotene isomerase D27-like protein;(source:Araport11) Ipc10G0001670 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc10G0001680 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0001690 AT3G01680.1 0 Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile. sieve element occlusion amino-terminus protein;(source:Araport11) Ipc10G0001700 AT3G22810.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions. auxin canalization protein (DUF828);(source:Araport11) Ipc10G0001710 AT1G30240.1 0 0 proline-, glutamic acid/leucine-rich protein;(source:Araport11) Ipc10G0001720 AT3G63290.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc10G0001730 AT3G63270.1 0 A mutation in ANTAGONIST OF LHP1 1 (ALP1) suppresses the phenotype of lhp1 mutant plants. ALP1 interacts genetically with several PcG and trxG components and antagonizes PcG silencing. The interaction has a negative effect on polycomb-mediated gene repression since double mutant combinations of clf alp1 or lhp1 alp1 show supression of the clf and lhp1 single mutant phenotypes. ALP1 domestication probably occured at the root of angiosperm diversification coincident with mutation of conserved residues important for endonuclease activity. nuclease;(source:Araport11) Ipc10G0001740 AT1G03080.3 0 0 kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc10G0001750 AT1G03090.2 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. methylcrotonyl-CoA carboxylase alpha chain;(source:Araport11) Ipc10G0001760 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0001770 AT3G63250.3 0 Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. homocysteine methyltransferase 2;(source:Araport11) Ipc10G0001780 #N/A #N/A #N/A #N/A Ipc10G0001790 AT3G63240.2 0 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0001800 AT2G48140.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc10G0001810 AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc10G0001820 AT3G22550.1 Protein of unknown function (DUF581) 0 NAD(P)H-quinone oxidoreductase subunit, putative (DUF581);(source:Araport11) Ipc10G0001830 AT4G02810.1 Protein of unknown function (DUF3049) A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines. FANTASTIC four-like protein (DUF3049);(source:Araport11) Ipc10G0001840 AT1G03160.1 FZO-like A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization. FZO-like protein;(source:Araport11) Ipc10G0001850 AT5G19330.1 ARM repeat protein interacting with ABF2 Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements. ARM repeat protein interacting with ABF2;(source:Araport11) Ipc10G0001860 AT3G63130.2 RAN GTPase activating protein 1 Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation. RAN GTPase activating protein 1;(source:Araport11) Ipc10G0001870 AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation. chloroplast stem-loop binding protein of 41 kDa;(source:Araport11) Ipc10G0001880 AT3G63200.1 PATATIN-like protein 9 0 PATATIN-like protein 9;(source:Araport11) Ipc10G0001890 AT3G63190.1 ribosome recycling factor, chloroplast precursor The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development. ribosome recycling factor, chloroplast precursor;(source:Araport11) Ipc10G0001900 AT3G63170.1 Chalcone-flavanone isomerase family protein Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism. Chalcone-flavanone isomerase family protein;(source:Araport11) Ipc10G0001910 AT5G28060.1 Ribosomal protein S24e family protein 0 Ribosomal protein S24e family protein;(source:Araport11) Ipc10G0001920 AT5G36740.5 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc10G0001930 AT4G02860.1 Phenazine biosynthesis PhzC/PhzF protein 0 Phenazine biosynthesis PhzC/PhzF protein;(source:Araport11) Ipc10G0001940 AT1G03250.1 0 0 R3H domain protein;(source:Araport11) Ipc10G0001950 AT4G14920.2 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc10G0001960 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc10G0001970 AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a Protease inhibitor/seed storage/LTP family protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0001980 AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc10G0001990 AT4G14240.1 CBS domain-containing protein with a domain of unknown function (DUF21) 0 CBS domain protein with a domain protein (DUF21);(source:Araport11) Ipc10G0002000 AT2G19520.1 Transducin family protein / WD-40 repeat family protein Controls flowering. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc10G0002010 AT3G61710.1 AUTOPHAGY 6 Encodes autophagy protein 6 (ATG6), required for pollen germination and plant development. AUTOPHAGY 6;(source:Araport11) Ipc10G0002020 AT4G02880.1 0 0 ELKS/Rab6-interacting/CAST family protein;(source:Araport11) Ipc10G0002030 AT4G15210.4 0 cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems. beta-amylase 5;(source:Araport11) Ipc10G0002040 AT3G63060.1 EID1-like 3 EDL3 is an F-box protein involved that mediated the regulation of abscisic acid signalling. EID1-like 3;(source:Araport11) Ipc10G0002050 AT4G02900.4 0 0 ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc10G0002060 AT2G48120.1 pale cress protein (PAC) The pale cress (pac) mutant affects chloroplast and leaf development; mutants are ABA-deficient and accumulate lower levels of carotenoids and chlorophyll compared to wild type. PAC binds 23srRNA and appears to be required for 50s ribosome assembly. Three alternative transcripts of this gene exist.PAC is essential for photoautotrophic growth and associates with psbK-psbI, ndhF, ndhD, and 23S ribosomal RNA in vivo(PMID:28805278) pale cress protein (PAC);(source:Araport11) Ipc10G0002070 AT1G03330.1 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc10G0002080 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc10G0002090 AT2G40080.1 Protein of unknown function (DUF1313) Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes. EARLY FLOWERING-like protein (DUF1313);(source:Araport11) Ipc10G0002100 AT1G03350.1 BSD domain-containing protein 0 BSD domain-containing protein;(source:Araport11) Ipc10G0002110 AT2G48030.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0002120 AT2G48020.2 Major facilitator superfamily protein Encodes a zinc transporter ZIF2. Expression of ZIF2 is regulated by alternative splicing. Major facilitator superfamily protein;(source:Araport11) Ipc10G0002130 AT2G48010.1 receptor-like kinase in in flowers 3 receptor-like serine/threonine kinase (RKF3) The mRNA is cell-to-cell mobile. receptor-like kinase in in flowers 3;(source:Araport11) Ipc10G0002140 AT1G03440.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc10G0002150 AT1G07710.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc10G0002160 AT1G54690.1 gamma histone variant H2AX Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10–20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. gamma histone variant H2AX;(source:Araport11) Ipc10G0002170 AT4G03080.1 BRI1 suppressor 1 (BSU1)-like 1 0 BRI1 suppressor 1 (BSU1)-like 1;(source:Araport11) Ipc10G0002180 AT2G47980.1 sister-chromatid cohesion protein 3 Essential to the monopolar orientation of the kinetochores during meiosis. sister-chromatid cohesion protein 3;(source:Araport11) Ipc10G0002190 AT2G47970.1 Nuclear pore localisation protein NPL4 0 Nuclear pore localization protein NPL4;(source:Araport11) Ipc10G0002200 AT4G03100.1 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11) Ipc10G0002220 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc10G0002210 AT5G59980.3 0 Encodes a predicted protein subunit of RNases P/MRP that plays a role in female gametophyte development and male competence. Polymerase/histidinol phosphatase-like protein;(source:Araport11) Ipc10G0002230 AT3G62990.1 0 0 myelin transcription factor-like protein;(source:Araport11) Ipc10G0002240 AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc10G0002250 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0002260 AT2G47940.1 DEGP protease 2 Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product. DEGP protease 2;(source:Araport11) Ipc10G0002270 AT1G48910.1 Flavin-containing monooxygenase family protein A paternally expressed imprinted gene. Flavin-containing monooxygenase family protein;(source:Araport11) Ipc10G0002280 AT1G48910.1 Flavin-containing monooxygenase family protein A paternally expressed imprinted gene. Flavin-containing monooxygenase family protein;(source:Araport11) Ipc10G0002290 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc10G0002300 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0002310 AT2G35160.5 0 Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain. SU(VAR)3-9 homolog 5;(source:Araport11) Ipc10G0002320 AT1G16470.2 proteasome subunit PAB1 Encodes 20S proteasome subunit PAB1 (PAB1). proteasome subunit PAB1;(source:Araport11) Ipc10G0002330 #N/A #N/A #N/A #N/A Ipc10G0002340 AT1G27260.1 Paired amphipathic helix (PAH2) superfamily protein 0 Paired amphipathic helix (PAH2) superfamily protein;(source:Araport11) Ipc10G0002350 AT4G08350.1 global transcription factor group A2 0 global transcription factor group A2;(source:Araport11) Ipc10G0002360 AT1G02120.1 GRAM domain family protein Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system. The mRNA is cell-to-cell mobile. GRAM domain family protein;(source:Araport11) Ipc10G0002370 AT3G22110.1 20S proteasome alpha subunit C1 Encodes the alpha-3 subunit of 20s proteasome. 20S proteasome alpha subunit C1;(source:Araport11) Ipc10G0002380 AT3G57170.1 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein 0 N-acetylglucosaminyl transferase component family protein / Gpi1 family protein;(source:Araport11) Ipc10G0002390 AT1G10330.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc10G0002400 AT2G47930.1 arabinogalactan protein 26 0 arabinogalactan protein 26;(source:Araport11) Ipc10G0002410 AT1G03470.4 0 Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the nuclear membrane and the vacuolar membrane. Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc10G0002420 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc10G0002430 AT3G05030.4 0 Encodes a vacuolar K+/H+ exchanger essential for active K+ uptake at the tonoplast and involved in regulating stomatal closure. sodium hydrogen exchanger 2;(source:Araport11) Ipc10G0002440 AT3G23325.1 Splicing factor 3B subunit 5/RDS3 complex subunit 10 0 Splicing factor 3B subunit 5/RDS3 complex subunit 10;(source:Araport11) Ipc10G0002450 AT3G62980.1 F-box/RNI-like superfamily protein Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis. F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0002460 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0002470 AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0002480 AT4G03180.1 0 0 rRNA-processing protein;(source:Araport11) Ipc10G0002490 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc10G0002500 AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor 0 membrane-anchored ubiquitin-fold protein 6 precursor;(source:Araport11) Ipc10G0002510 AT2G47850.3 Zinc finger C-x8-C-x5-C-x3-H type family protein 0 Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc10G0002520 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0002530 AT1G71430.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0002540 AT4G14450.1 0 A member of a small family of proline/serine rich proteins of unknown function. It interacts with defense related MAP kinase MPK6. It's expression is induced by PAMP elicitors. May play a role in response to pathogens. hypothetical protein;(source:Araport11) Ipc10G0002550 AT4G30600.2 0 0 signal recognition particle receptor alpha subunit family protein;(source:Araport11) Ipc10G0002560 AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1 encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation 3-hydroxyacyl-CoA dehydratase 1;(source:Araport11) Ipc10G0002570 AT4G03200.1 catalytics 0 catalytics;(source:Araport11) Ipc10G0002580 AT3G62900.3 0 0 CW-type Zinc Finger;(source:Araport11) Ipc10G0002590 AT2G47820.2 0 0 arginine-glutamic acid dipeptide repeat protein;(source:Araport11) Ipc10G0002600 AT2G47810.1 nuclear factor Y, subunit B5 0 nuclear factor Y, subunit B5;(source:Araport11) Ipc10G0002610 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc10G0002620 AT4G13420.1 high affinity K+ transporter 5 Encodes a protein of the KUP/HAK/KT potassium channel class that is upregulated in the roots by K levels. high affinity K+ transporter 5;(source:Araport11) Ipc10G0002630 AT1G02970.1 WEE1 kinase homolog Protein kinase that negatively regulates the entry into mitosis. WEE1-like kinase;(source:Araport11) Ipc10G0002640 AT1G02730.1 cellulose synthase-like D5 Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.It's expression is cell cycle dependent and it appears to function in cell plate formation. cellulose synthase-like D5;(source:Araport11) Ipc10G0002650 AT3G62660.1 galacturonosyltransferase-like 7 Encodes a protein with putative galacturonosyltransferase activity. galacturonosyltransferase-like 7;(source:Araport11) Ipc10G0002660 AT4G18180.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0002670 AT4G18180.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0002680 AT3G14240.1 Subtilase family protein 0 Subtilase family protein;(source:Araport11) Ipc10G0002690 AT3G16780.1 Ribosomal protein L19e family protein 0 Ribosomal protein L19e family protein;(source:Araport11) Ipc10G0002700 AT3G61750.1 Cytochrome b561/ferric reductase transmembrane with DOMON related domain 0 Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein;(source:Araport11) Ipc10G0002710 AT3G49200.1 O-acyltransferase (WSD1-like) family protein 0 O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc10G0002720 AT4G23850.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc10G0002730 AT3G16850.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0002740 AT5G40520.2 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc10G0002750 AT1G02816.1 Protein of unknown function, DUF538 0 pectinesterase (Protein of unknown function, DUF538);(source:Araport11) Ipc10G0002760 AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein 0 Late embryogenesis abundant 3 (LEA3) family protein;(source:Araport11) Ipc10G0002780 AT4G01560.1 Ribosomal RNA processing Brix domain protein 0 Ribosomal RNA processing Brix domain protein;(source:Araport11) Ipc10G0002770 AT1G70030.1 Paired amphipathic helix (PAH2) superfamily protein 0 Paired amphipathic helix (PAH2) superfamily protein;(source:Araport11) Ipc10G0002790 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc10G0002800 AT2G47580.1 spliceosomal protein U1A encodes spliceosomal protein U1A spliceosomal protein U1A;(source:Araport11) Ipc10G0002810 AT3G62860.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc10G0002820 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0002830 AT1G23110.7 0 0 fold protein;(source:Araport11) Ipc10G0002840 AT3G62840.2 Small nuclear ribonucleoprotein family protein 0 Small nuclear ribonucleoprotein family protein;(source:Araport11) Ipc10G0002850 AT2G47650.1 UDP-xylose synthase 4 encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. UDP-xylose synthase 4;(source:Araport11) Ipc10G0002860 AT4G02425.1 0 0 LYR motif protein;(source:Araport11) Ipc10G0002870 AT2G47680.1 zinc finger (CCCH type) helicase family protein 0 zinc finger (CCCH type) helicase family protein;(source:Araport11) Ipc10G0002880 AT3G14600.1 Ribosomal protein L18ae/LX family protein 0 Ribosomal protein L18ae/LX family protein;(source:Araport11) Ipc10G0002890 AT3G62790.1 NADH-ubiquinone oxidoreductase-related 0 NADH-ubiquinone oxidoreductase-like protein;(source:Araport11) Ipc10G0002900 AT4G16970.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0002910 AT4G17560.1 Ribosomal protein L19 family protein 0 Ribosomal protein L19 family protein;(source:Araport11) Ipc10G0002920 AT3G24255.3 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc10G0002930 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc10G0002940 AT1G77670.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 0 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc10G0002950 AT2G16700.4 0 Encodes actin depolymerizing factor 5 (ADF5). actin depolymerizing factor 5;(source:Araport11) Ipc10G0002960 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0002970 AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc10G0002980 AT1G74480.1 RWP-RK domain-containing protein 0 RWP-RK domain-containing protein;(source:Araport11) Ipc10G0002990 AT1G02960.2 0 0 kinetochore protein;(source:Araport11) Ipc10G0003000 AT2G47750.1 putative indole-3-acetic acid-amido synthetase GH3.9 Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology. putative indole-3-acetic acid-amido synthetase GH3.9;(source:Araport11) Ipc10G0003010 AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway. TSPO(outer membrane tryptophan-rich sensory protein)-like protein;(source:Araport11) Ipc10G0003020 AT4G02480.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc10G0003030 AT4G02450.2 HSP20-like chaperones superfamily protein Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem. HSP20-like chaperones superfamily protein;(source:Araport11) Ipc10G0003040 AT4G16110.1 response regulator 2 Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation. response regulator 2;(source:Araport11) Ipc10G0003050 AT3G48425.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0003060 AT4G02440.1 F-box family protein EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta. F-box family protein;(source:Araport11) Ipc10G0003070 AT1G02840.5 0 SR34/SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0003080 AT4G02070.1 MUTS homolog 6 encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex. MUTS homolog 6;(source:Araport11) Ipc10G0003090 AT2G47460.1 myb domain protein 12 MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3'hydroxylase (F3'H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots. Mutations in MYB12 block both auxin and ethylene stimulation of flavonoid synthesis. myb domain protein 12;(source:Araport11) Ipc10G0003100 AT5G61710.1 0 0 cotton fiber protein;(source:Araport11) Ipc10G0003110 AT5G40780.1 lysine histidine transporter 1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. lysine histidine transporter 1;(source:Araport11) Ipc10G0003120 AT4G01730.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc10G0003130 AT5G17680.2 0 0 disease resistance protein (TIR-NBS-LRR class);(source:Araport11) Ipc10G0003140 AT5G62650.1 Tic22-like family protein 0 Tic22-like family protein;(source:Araport11) Ipc10G0003150 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc10G0003160 AT2G47115.1 0 0 protein rolling protein;(source:Araport11) Ipc10G0003170 AT4G01880.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc10G0003180 AT3G62130.2 0 Encodes an enzyme that decomposes L-cysteine into pyruvate, H2S, and NH3. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc10G0003190 AT1G28230.1 purine permease 1 Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation. purine permease 1;(source:Araport11) Ipc10G0003200 AT3G62390.1 TRICHOME BIREFRINGENCE-LIKE 6 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 6;(source:Araport11) Ipc10G0003210 AT3G62390.2 0 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 6;(source:Araport11) Ipc10G0003220 AT3G03450.1 RGA-like 2 Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. RGA-like 2;(source:Araport11) Ipc10G0003230 AT3G62390.1 TRICHOME BIREFRINGENCE-LIKE 6 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 6;(source:Araport11) Ipc10G0003240 AT2G16760.1 Calcium-dependent phosphotriesterase superfamily protein 0 Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11) Ipc10G0003250 AT2G47390.1 Prolyl oligopeptidase family protein 0 Prolyl oligopeptidase family protein;(source:Araport11) Ipc10G0003260 AT1G56423.2 0 0 hypothetical protein;(source:Araport11) Ipc10G0003270 AT5G60580.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0003280 AT3G62410.1 CP12 domain-containing protein 2 CP12-2 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. CP12-2 is coordinately regulated by light with the photosynthetic GAPDH and PRK. The annotation of this gene is based on article 32494. The mRNA is cell-to-cell mobile. CP12 domain-containing protein 2;(source:Araport11) Ipc10G0003290 AT4G30010.1 0 0 ATP-dependent RNA helicase;(source:Araport11) Ipc10G0003300 AT4G30400.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0003310 AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc10G0003320 AT1G71270.1 Vps52 / Sac2 family Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network. Vps52 / Sac2 family;(source:Araport11) Ipc10G0003330 AT1G14150.2 PsbQ-like 2 Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen. PsbQ-like 2;(source:Araport11) Ipc10G0003340 AT2G18700.1 trehalose phosphatase/synthase 11 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. trehalose phosphatase/synthase 11;(source:Araport11) Ipc10G0003350 AT1G12240.1 Glycosyl hydrolases family 32 protein Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole. The mRNA is cell-to-cell mobile. Glycosyl hydrolases family 32 protein;(source:Araport11) Ipc10G0003360 AT5G57710.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein SMAX1 (SUPPRESSOR OF MAX2 1) is a member of an eight-gene family in Arabidopsis that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. SMAX1 is an important component of KAR/SL signaling during seed germination and seedling growth, but is not necessary for all MAX2-dependent responses. The mRNA is cell-to-cell mobile. Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0003370 AT3G54170.1 FKBP12 interacting protein 37 Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.FIP37 is a core component of the M6A methyltransferase complex. Homozygous loss of function mutations are embryo lethal. In the shoot meristem FIP37 methylation targets include WUS and STM. FKBP12 interacting protein 37;(source:Araport11) Ipc10G0003380 AT4G00630.2 K+ efflux antiporter 2 Encodes a K(+)/H(+) antiporter that modulates monovalent cation and pH homeostasis in plant chloroplasts or plastids. K+ efflux antiporter 2;(source:Araport11) Ipc10G0003390 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc10G0003400 AT5G11180.2 0 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.6;(source:Araport11) Ipc10G0003410 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc10G0003420 AT1G24380.1 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc10G0003430 AT5G57685.1 glutamine dumper 3 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 3;(source:Araport11) Ipc10G0003440 AT3G03660.1 WUSCHEL related homeobox 11 Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX12, WOX11 is involved in de novo root organogenesis. WUSCHEL related homeobox 11;(source:Araport11) Ipc10G0003450 AT5G57685.1 glutamine dumper 3 Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7). glutamine dumper 3;(source:Araport11) Ipc10G0003460 AT5G57660.1 CONSTANS-like 5 0 CONSTANS-like 5;(source:Araport11) Ipc10G0003470 AT2G24765.1 ADP-ribosylation factor 3 GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner ADP-ribosylation factor 3;(source:Araport11) Ipc10G0003480 AT4G30320.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc10G0003490 AT5G57610.1 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain 0 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11) Ipc10G0003500 AT5G57620.1 myb domain protein 36 MYB36 is a transcriptional regulator that acts to promote differentiation of the endodermis during root development. It promotes the development the Casparian band in part by regulating the expression of genes involved in localizing lignin biosynthetic machinery to the Casparian band. MYB36 binds to and regulates the expression of factors involved in producing the Casparian band including CASP1, PER64, and ESB1. myb domain protein 36;(source:Araport11) Ipc10G0003510 AT1G05350.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0003520 AT5G17000.1 Zinc-binding dehydrogenase family protein 0 Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc10G0003530 AT5G16970.1 alkenal reductase encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls alkenal reductase;(source:Araport11) Ipc10G0003540 AT5G16990.1 Zinc-binding dehydrogenase family protein molecular function has not been defined, was shown involved in oxidative stress tolerance. The mRNA is cell-to-cell mobile. Zinc-binding dehydrogenase family protein;(source:Araport11) Ipc10G0003550 AT2G44065.3 0 0 Ribosomal protein L2 family;(source:Araport11) Ipc10G0003560 AT2G43850.3 0 0 Integrin-linked protein kinase family;(source:Araport11) Ipc10G0003570 AT2G43820.1 UDP-glucosyltransferase 74F2 Encodes a nicotinate-O-glycosyltransferase. Induced by Salicylic acid, virus, fungus and bacteria. Also involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and anthranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. UDP-glucosyltransferase 74F2;(source:Araport11) Ipc10G0003580 AT4G31500.1 cytochrome P450, family 83, subfamily B, polypeptide 1 Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. cytochrome P450, family 83, subfamily B, polypeptide 1;(source:Araport11) Ipc10G0003590 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc10G0003600 AT4G39330.1 cinnamyl alcohol dehydrogenase 9 0 cinnamyl alcohol dehydrogenase 9;(source:Araport11) Ipc10G0003610 AT2G43790.1 MAP kinase 6 Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. The mRNA is cell-to-cell mobile. MAP kinase 6;(source:Araport11) Ipc10G0003620 AT3G19950.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc10G0003630 AT1G21500.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0003640 AT5G39740.2 ribosomal protein L5 B Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development. ribosomal protein L5 B;(source:Araport11) Ipc10G0003650 AT3G02640.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0003660 AT2G43750.2 O-acetylserine (thiol) lyase B Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Required for pollen tube growth and/or fertilization. O-acetylserine (thiol) lyase B;(source:Araport11) Ipc10G0003670 AT3G59710.3 0 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc10G0003680 AT4G25360.2 TRICHOME BIREFRINGENCE-LIKE 18 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 18;(source:Araport11) Ipc10G0003690 AT2G43710.1 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc10G0003700 AT5G23660.1 homolog of Medicago truncatula MTN3 Encodes a member of the SWEET sucrose efflux transporter family proteins. bidirectional sugar transporter SWEET12-like protein;(source:Araport11) Ipc10G0003710 AT2G43710.1 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc10G0003720 AT1G48170.1 0 0 proteasome assembly chaperone;(source:Araport11) Ipc10G0003730 AT2G43680.5 0 0 IQ-domain 14;(source:Araport11) Ipc10G0003740 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0003750 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc10G0003760 AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein Encodes a C2-GRAM domain-containing protein that is induced by B. cinerea infection. It is required for cleavage of BAG6 and thus plays a role in mediating resistance to fungal infection. C2 domain-containing protein / GRAM domain-containing protein;(source:Araport11) Ipc10G0003770 AT5G16680.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc10G0003780 AT2G31730.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc10G0003790 AT3G49660.1 Transducin/WD40 repeat-like superfamily protein Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc10G0003800 AT5G14240.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc10G0003810 AT2G43640.2 Signal recognition particle, SRP9/SRP14 subunit 0 Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11) Ipc10G0003820 AT3G54420.1 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase;(source:Araport11) Ipc10G0003830 AT1G58390.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0003840 AT1G59218.3 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0003850 AT2G27810.3 nucleobase-ascorbate transporter 12 Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter. nucleobase-ascorbate transporter 12;(source:Araport11) Ipc10G0003860 AT5G35450.2 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0003870 AT5G48620.6 0 0 Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11) Ipc10G0003880 AT3G25855.1 Copper transport protein family 0 Copper transport protein family;(source:Araport11) Ipc10G0003890 AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc10G0003900 AT3G25860.1 2-oxoacid dehydrogenases acyltransferase family protein Encodes the dihydrolipoamide S-acetyltransferase subunit of the plastid Pyruvate Dehydrogenase Complex (E2). Mutant has embryo defect. 2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11) Ipc10G0003910 AT3G02540.3 Rad23 UV excision repair protein family Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome. Rad23 UV excision repair protein family;(source:Araport11) Ipc10G0003920 AT5G60930.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc10G0003930 AT1G13360.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0003940 AT1G14800.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0003950 AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression. midasin-like protein;(source:Araport11) Ipc10G0003960 AT3G25882.1 NIM1-interacting 2 encodes a kinase that physically interacts with NPR1/NIM1 NIM1-interacting 2;(source:Araport11) Ipc10G0003970 AT3G25882.1 NIM1-interacting 2 encodes a kinase that physically interacts with NPR1/NIM1 NIM1-interacting 2;(source:Araport11) Ipc10G0003980 AT3G02550.1 LOB domain-containing protein 41 0 LOB domain-containing protein 41;(source:Araport11) Ipc10G0003990 AT1G55170.1 0 0 DNA double-strand break repair protein;(source:Araport11) Ipc10G0004000 AT1G25422.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0004010 AT1G68490.1 0 0 translocase subunit seca;(source:Araport11) Ipc10G0004020 AT1G68440.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0004030 AT1G68290.1 endonuclease 2 Encodes an endonuclease ENDO2. ENDO2 purified from transgenic Arabidopsis digests RNA, ssDNA, and dsDNA, with a substrate preference for ssDNA and RNA. ENDO2 produced and purified from Nicotiana benthamiana expression showed no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, in vitro. endonuclease 2;(source:Araport11) Ipc10G0004040 AT1G68300.1 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc10G0004050 AT1G68260.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc10G0004060 AT2G21720.1 Plant protein of unknown function (DUF639) 0 ArgH (DUF639);(source:Araport11) Ipc10G0004070 AT1G68320.1 myb domain protein 62 putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. myb domain protein 62;(source:Araport11) Ipc10G0004080 AT1G25370.2 0 0 hypothetical protein (DUF1639);(source:Araport11) Ipc10G0004090 AT5G38830.1 Cysteinyl-tRNA synthetase, class Ia family protein 0 Cysteinyl-tRNA synthetase, class Ia family protein;(source:Araport11) Ipc10G0004100 AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein Encodes a nuclear localized member of the C2H2 family of TFIIIA transcription factors.GIS3 is involved in trichome initiation and development downstream of GA and cytokinin signaling. GIS regulates the expression GIS and GIS2. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc10G0004110 AT3G18290.1 zinc finger protein-related Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. The mRNA is cell-to-cell mobile. zinc finger protein-like protein;(source:Araport11) Ipc10G0004120 AT1G25375.1 Metallo-hydrolase/oxidoreductase superfamily protein 0 Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc10G0004130 AT1G25375.1 Metallo-hydrolase/oxidoreductase superfamily protein 0 Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11) Ipc10G0004140 AT1G68390.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc10G0004150 AT1G68400.1 leucine-rich repeat transmembrane protein kinase family protein 0 leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11) Ipc10G0004160 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc10G0004170 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0004180 AT4G33840.1 Glycosyl hydrolase family 10 protein 0 Glycosyl hydrolase family 10 protein;(source:Araport11) Ipc10G0004190 AT4G33840.1 Glycosyl hydrolase family 10 protein 0 Glycosyl hydrolase family 10 protein;(source:Araport11) Ipc10G0004200 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0004210 AT5G39020.1 Malectin/receptor-like protein kinase family protein Involved in growth adaptation upon exposure to metal ions. Contributes together with the other MDS genes to the complex network of CrRLK1Ls that positively and negatively affect growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc10G0004220 AT4G27400.1 Late embryogenesis abundant (LEA) protein-related 0 Late embryogenesis abundant (LEA) protein-like protein;(source:Araport11) Ipc10G0004230 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc10G0004240 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0004250 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc10G0004260 AT1G18390.2 Encodes a plasma membrane localized protein involved in ABA signaling. 0 Serine/Threonine kinase family catalytic domain protein;(source:Araport11) Ipc10G0004270 AT2G01260.1 Protein of unknown function (DUF789) 0 hypothetical protein (DUF789);(source:Araport11) Ipc10G0004280 AT5G38200.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc10G0004290 AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc10G0004300 AT2G01210.1 Leucine-rich repeat protein kinase family protein ZAR1 encodes a plasma membrane localized leucine-rich repeat receptor-like kinase (LRR-RLK) that contains a putative CaM-binding domain and a Gβ-binding motif within its intracellular kinase region. Homozygous of function mutations are embryo-lethal and fail to properly make the first asymmetric division of the zygote. ZAR1 interacts with both CaM and Gβ in vivo and that interaction activates ZAR1 kinase activity. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0004310 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0004320 AT4G10120.3 0 Encodes a protein with putative sucrose-phosphate synthase activity. Sucrose-phosphate synthase family protein;(source:Araport11) Ipc10G0004330 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0004340 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0004350 AT2G01170.1 bidirectional amino acid transporter 1 Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys, GABA but not pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue. bidirectional amino acid transporter 1;(source:Araport11) Ipc10G0004360 AT1G15140.1 FAD/NAD(P)-binding oxidoreductase 0 FAD/NAD(P)-binding oxidoreductase;(source:Araport11) Ipc10G0004370 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0004380 AT2G01275.5 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc10G0004390 AT1G15020.2 quiescin-sulfhydryl oxidase 1 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain. quiescin-sulfhydryl oxidase 1;(source:Araport11) Ipc10G0004400 AT1G74700.1 tRNAse Z1 Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. tRNAse Z1;(source:Araport11) Ipc10G0004410 AT1G71110.1 0 0 transmembrane protein;(source:Araport11) Ipc10G0004420 AT2G01290.1 ribose-5-phosphate isomerase 2 Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death. ribose-5-phosphate isomerase 2;(source:Araport11) Ipc10G0004430 AT5G40940.1 putative fasciclin-like arabinogalactan protein 20 0 putative fasciclin-like arabinogalactan protein 20;(source:Araport11) Ipc10G0004440 AT1G22990.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc09G0009990 AT2G21720.1 Plant protein of unknown function (DUF639) 0 ArgH (DUF639);(source:Araport11) Ipc09G0009980 AT5G04970.1 Plant invertase/pectin methylesterase inhibitor superfamily 0 Plant invertase/pectin methylesterase inhibitor superfamily;(source:Araport11) Ipc09G0009970 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0009960 AT2G33510.1 0 CFL1 is a negative regulator of cuticle development. Overexpression of CFL1 causes defects in cuticle formation. Interacts with FBH1, FBH3 and HDG1 to regulate cuticle formation. The physical interaction requires the C terminal 50 amino acids. ATP-dependent RNA helicase;(source:Araport11) Ipc09G0009950 #N/A #N/A #N/A #N/A Ipc09G0009940 AT1G63490.2 0 Histone demethylase belonging to the KDM5/JARID1 family which plays crucial roles in response to dehydration stress and abscisic acid (ABA). Directly binds the chromatin of OPEN STOMATA 1 (OST1) and demethylated H3K4me3 for the regulation of OST1 mRNA abundance, thereby modulating the dehydration stress response. transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc09G0009930 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009920 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc09G0009910 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0009900 AT3G13235.2 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc09G0009890 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009880 AT5G40620.1 0 0 transmembrane protein;(source:Araport11) Ipc09G0009870 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0009850 AT5G26180.5 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0009860 AT5G26180.5 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc09G0009840 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0009830 AT3G55480.2 protein affected trafficking 2 Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles. protein affected traf%26#64257;(source:Araport11) Ipc09G0009820 AT2G31400.2 0 Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression. s uncoupled 1;(source:Araport11) Ipc09G0009810 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009800 AT5G13180.1 NAC domain containing protein 83 Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation. NAC domain containing protein 83;(source:Araport11) Ipc09G0009790 AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein 0 Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11) Ipc09G0009780 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009770 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009760 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0009750 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009740 AT1G49580.1 Calcium-dependent protein kinase (CDPK) family protein 0 Calcium-dependent protein kinase (CDPK) family protein;(source:Araport11) Ipc09G0009730 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009720 AT2G30720.1 Thioesterase/thiol ester dehydrase-isomerase superfamily protein 0 Thioesterase/thiol ester dehydrase-isomerase superfamily protein;(source:Araport11) Ipc09G0009710 AT3G25500.1 formin homology 1 Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. formin homology 1;(source:Araport11) Ipc09G0009700 AT2G43790.1 MAP kinase 6 Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. The mRNA is cell-to-cell mobile. MAP kinase 6;(source:Araport11) Ipc09G0009690 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009680 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11) Ipc09G0009670 AT2G27800.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc09G0009660 AT1G21230.1 wall associated kinase 5 encodes a wall-associated kinase The mRNA is cell-to-cell mobile. wall associated kinase 5;(source:Araport11) Ipc09G0009650 AT4G30130.3 0 0 DUF630 family protein (DUF630 and DUF632);(source:Araport11) Ipc09G0009640 AT3G59770.1 sacI homology domain-containing protein / WW domain-containing protein Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses. sacI homology domain-containing protein / WW domain-containing protein;(source:Araport11) Ipc09G0009630 AT5G49960.1 0 0 ion channel protein;(source:Araport11) Ipc09G0009620 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009610 AT1G43000.1 PLATZ transcription factor family protein 0 PLATZ transcription factor family protein;(source:Araport11) Ipc09G0009600 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc09G0009590 AT4G26010.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc09G0009580 AT1G05380.3 0 0 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc09G0009570 AT1G48490.3 Protein kinase superfamily protein Protein kinase which together with IREH1 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc09G0009560 AT1G05730.1 Eukaryotic protein of unknown function (DUF842) 0 FAM136A-like protein (DUF842);(source:Araport11) Ipc09G0009550 AT1G18480.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc09G0009540 AT1G18480.1 Calcineurin-like metallo-phosphoesterase superfamily protein 0 Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11) Ipc09G0009530 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc09G0009520 AT2G46160.2 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc09G0009510 AT1G58060.1 RNA helicase family protein 0 RNA helicase family protein;(source:Araport11) Ipc09G0009500 AT2G43710.1 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc09G0009490 AT2G43710.1 Plant stearoyl-acyl-carrier-protein desaturase family protein Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Plant stearoyl-acyl-carrier-protein desaturase family protein;(source:Araport11) Ipc09G0009480 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc09G0009470 AT1G68710.3 0 0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc09G0009460 AT3G50350.2 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc09G0009450 AT3G60800.1 DHHC-type zinc finger family protein Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence. DHHC-type zinc finger family protein;(source:Araport11) Ipc09G0009440 AT2G25710.2 holocarboxylase synthase 1 Encodes a dual-targeted biotin holocarboxylase synthetase that can localize to the chloroplast and the cytosol. In vitro, it has been shown to catalyze the addition of biotin to the BCCP subunit of acetyl-CoA carboxylase and it can also biotinylate methylcrotonyl-CoA carboxylase. A small upstream ORF in the 5'UTR (uORF24) regulates the differential targeting of this enzyme. holocarboxylase synthase 1;(source:Araport11) Ipc09G0009430 AT3G59680.1 0 0 Serine/Threonine-kinase;(source:Araport11) Ipc09G0009420 AT5G58375.1 Methyltransferase-related protein 0 Methyltransferase-related protein;(source:Araport11) Ipc09G0009410 AT3G59660.1 C2 domain-containing protein / GRAM domain-containing protein Encodes a C2-GRAM domain-containing protein that is induced by B. cinerea infection. It is required for cleavage of BAG6 and thus plays a role in mediating resistance to fungal infection. C2 domain-containing protein / GRAM domain-containing protein;(source:Araport11) Ipc09G0009400 #N/A #N/A #N/A #N/A Ipc09G0009390 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc09G0009380 AT4G36020.2 0 Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature. cold shock domain protein 1;(source:Araport11) Ipc09G0009370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0009360 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0009350 AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc03G0025490 #N/A #N/A #N/A #N/A Ipc03G0025480 AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 2 0 xyloglucan endotransglucosylase/hydrolase 2;(source:Araport11) Ipc03G0025470 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025460 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc03G0025450 AT5G07340.1 Calreticulin family protein 0 Calreticulin family protein;(source:Araport11) Ipc03G0025440 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc03G0025430 AT1G49230.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc03G0025420 AT2G21990.1 Protein of unknown function, DUF617 0 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11) Ipc03G0025410 AT1G03020.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2. Thioredoxin superfamily protein;(source:Araport11) Ipc03G0025400 AT3G62930.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc03G0025390 AT2G21960.1 0 0 transmembrane protein;(source:Araport11) Ipc03G0025380 #N/A #N/A #N/A #N/A Ipc03G0025370 AT3G42170.1 BED zinc finger ;hAT family dimerisation domain transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc03G0025360 AT2G21950.1 SKP1 interacting partner 6 Encodes an SKP1 interacting partner (SKIP6). SKP1 interacting partner 6;(source:Araport11) Ipc03G0025350 AT2G21940.4 shikimate kinase 1 Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves, and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast. shikimate kinase 1;(source:Araport11) Ipc03G0025340 #N/A #N/A #N/A #N/A Ipc03G0025330 AT4G39520.1 GTP-binding protein-related Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity. GTP-binding protein-like protein;(source:Araport11) Ipc03G0025320 AT5G09960.1 0 0 sorbin/SH3 domain protein;(source:Araport11) Ipc03G0025310 AT2G31510.1 IBR domain-containing protein 0 IBR domain-containing protein;(source:Araport11) Ipc03G0025300 AT3G47920.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc03G0025290 #N/A #N/A #N/A #N/A Ipc03G0025280 AT5G64830.1 programmed cell death 2 C-terminal domain-containing protein 0 programmed cell death 2 C-terminal domain-containing protein;(source:Araport11) Ipc03G0025270 AT5G28780.1 PIF1 helicase 0 PIF1 helicase;(source:Araport11) Ipc03G0025260 AT3G07840.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc03G0025250 AT5G66540.2 0 0 U3 small nucleolar ribonucleoprotein;(source:Araport11) Ipc03G0025240 AT5G66540.2 0 0 U3 small nucleolar ribonucleoprotein;(source:Araport11) Ipc03G0025230 AT4G39490.1 cytochrome P450, family 96, subfamily A, polypeptide 10 member of CYP96A cytochrome P450, family 96, subfamily A, polypeptide 10;(source:Araport11) Ipc03G0025220 AT4G33270.1 Transducin family protein / WD-40 repeat family protein Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc03G0025210 AT5G64813.3 0 The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.The mRNA is cell-to-cell mobile. Ras-related small GTP-binding family protein;(source:Araport11) Ipc03G0025200 AT2G06265.1 0 0 zinc ion-binding protein;(source:Araport11) Ipc03G0025190 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc03G0025180 AT5G40990.1 GDSL lipase 1 Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway. GDSL lipase 1;(source:Araport11) Ipc03G0025170 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc03G0025160 AT4G39660.1 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate aminotransferase 2 homolog (AGT2). The mRNA is cell-to-cell mobile. alanine:glyoxylate aminotransferase 2;(source:Araport11) Ipc03G0025150 AT5G26170.1 WRKY DNA-binding protein 50 member of WRKY Transcription Factor; Group II-c. Involved in jasmonic acid inducible defense responses. WRKY DNA-binding protein 50;(source:Araport11) Ipc03G0025140 AT2G21860.1 violaxanthin de-epoxidase-related 0 violaxanthin de-epoxidase-like protein;(source:Araport11) Ipc03G0025130 AT4G39420.4 0 0 spatacsin carboxy-terminus protein;(source:Araport11) Ipc03G0025120 AT1G77750.1 Ribosomal protein S13/S18 family 0 Ribosomal protein S13/S18 family;(source:Araport11) Ipc03G0025110 AT4G39410.1 WRKY DNA-binding protein 13 Encodes a member of the Group II-c WRKY Transcription Factor family that is involved in stem development and has been shown to directly bind to the promoter of NST2. Mutants show a weak stem phenotype and show decreased expression of lignin-synthesis-related genes. WRKY DNA-binding protein 13;(source:Araport11) Ipc03G0025100 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc03G0025090 AT4G39400.1 Leucine-rich receptor-like protein kinase family protein Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc13G0008950 AT3G08970.2 0 J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth. DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc13G0008940 AT3G08960.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0008930 AT5G01350.1 0 0 UvrABC system C protein;(source:Araport11) Ipc13G0008920 AT5G01360.2 Plant protein of unknown function (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).The dwarf phenotype can only be seen in tbl3 tbl31 esk1 triple mutant. tbl3 and tbl31 are specifically involved in 3-O-monoacetylation of xylan. trichome birefringence-like protein (DUF828);(source:Araport11) Ipc13G0008910 AT3G51830.1 SAC domain-containing protein 8 putative transmembrane protein G5p (AtG5) mRNA, complete. autophagy-related (ATG) gene SAC domain-containing protein 8;(source:Araport11) Ipc13G0008900 AT5G42400.8 0 Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C. SET domain protein 25;(source:Araport11) Ipc13G0008890 AT3G51850.1 calcium-dependent protein kinase 13 member of Calcium Dependent Protein Kinase The mRNA is cell-to-cell mobile. calcium-dependent protein kinase 13;(source:Araport11) Ipc13G0008880 AT5G05600.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Encodes a protein with similarity to flavonol synthases that is involved in the detoxifcation polycyclic aromatic hydrocarbons.One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc13G0008870 AT2G01060.1 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc13G0008860 AT5G05610.2 alfin-like 1 Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7). alfin-like 1;(source:Araport11) Ipc13G0008850 AT5G01390.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc13G0008840 AT5G01400.3 0 Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64. HEAT repeat-containing protein;(source:Araport11) Ipc13G0008830 AT5G01450.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0008820 AT3G51860.1 cation exchanger 3 0 cation exchanger 3;(source:Araport11) Ipc13G0008810 AT5G01520.1 RING/U-box superfamily protein Encodes a cytosolic RING-type E3 ubiquitin (Ub) ligase that is critical for ABA and high salinity responses during germination. AtAIRP2 and SDIR1 likely play a combinatory role in ABA signaling and the response to high salt in Arabidopsis. RING/U-box superfamily protein;(source:Araport11) Ipc13G0008800 AT3G08940.2 light harvesting complex photosystem II Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II The mRNA is cell-to-cell mobile. light harvesting complex photosystem II;(source:Araport11) Ipc13G0008790 AT3G08990.3 0 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc13G0008780 AT2G40070.1 0 Encodes a microtubule-associated protein. flocculation FLO11-like protein;(source:Araport11) Ipc13G0008770 AT1G77260.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0008760 AT3G09010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0008750 AT2G40060.1 Clathrin light chain protein Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. The mRNA is cell-to-cell mobile. Clathrin light chain protein;(source:Araport11) Ipc13G0008740 AT3G09020.1 alpha 1,4-glycosyltransferase family protein 0 alpha 1,4-glycosyltransferase family protein;(source:Araport11) Ipc13G0008730 AT2G38120.1 Transmembrane amino acid transporter family protein Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. The mRNA is cell-to-cell mobile. Transmembrane amino acid transporter family protein;(source:Araport11) Ipc13G0008720 AT2G38110.1 glycerol-3-phosphate acyltransferase 6 bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly. glycerol-3-phosphate acyltransferase 6;(source:Araport11) Ipc13G0008710 AT1G07300.1 josephin protein-related 0 josephin protein-like protein;(source:Araport11) Ipc13G0008700 AT5G01220.1 sulfoquinovosyldiacylglycerol 2 Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. sulfoquinovosyldiacylglycerol 2;(source:Araport11) Ipc13G0008690 AT5G01210.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc13G0008680 AT2G38080.1 Laccase/Diphenol oxidase family protein LAC4 appears to have laccase activity based on enzyme assays performed using lac4 mutants. These mutants also have reduced levels of lignin. LAC4 is expressed in vascular bundles and fibers and likely contributes to lignin biosynthesis, and hence cell wall biosynthesis, there. lac4/irx12 mutants have a mild irregular xylem phenotype. Laccase/Diphenol oxidase family protein;(source:Araport11) Ipc13G0008670 AT3G09050.1 0 0 8-amino-7-oxononanoate synthase;(source:Araport11) Ipc13G0008660 AT3G09060.2 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0008650 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0008640 AT2G38060.1 phosphate transporter 4;2 Encodes an inorganic phosphate transporter (PHT4;2). phosphate transporter 4;(source:Araport11) Ipc13G0008630 AT3G09100.2 mRNA capping enzyme family protein 0 mRNA capping enzyme family protein;(source:Araport11) Ipc13G0008620 AT2G38000.1 chaperone protein dnaJ-related 0 chaperone protein dnaJ-like protein;(source:Araport11) Ipc13G0008610 AT2G37980.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0008600 AT3G09210.1 plastid transcriptionally active 13 0 plastid transcriptionally active 13;(source:Araport11) Ipc13G0008590 AT2G37960.2 0 0 myosin-M heavy protein;(source:Araport11) Ipc13G0008580 AT3G54050.2 high cyclic electron flow 1 Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis. The mRNA is cell-to-cell mobile. high cyclic electron flow 1;(source:Araport11) Ipc13G0008570 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc13G0008560 AT3G54020.1 Arabidopsis Inositol phosphorylceramide synthase 1 Inositol phosphorylceramide synthase Inositol phosphorylceramide synthase 1;(source:Araport11) Ipc13G0008550 AT4G15240.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc13G0008540 AT3G09250.3 0 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc13G0008530 AT5G01030.3 0 0 enolase, putative (DUF3527);(source:Araport11) Ipc13G0008520 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc13G0008510 AT2G26975.1 Ctr copper transporter family 0 Ctr copper transporter family;(source:Araport11) Ipc13G0008500 AT3G54010.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. FKBP-type peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11) Ipc13G0008490 AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein Encodes universal stress protein (USP). Functions as a molecular chaperone under heat shock and oxidative stress conditions. Chaperone activity and assembly into complexes is redox regulated. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc13G0008480 AT5G02020.1 0 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). E3 ubiquitin-protein ligase RLIM-like protein;(source:Araport11) Ipc13G0008470 AT2G37920.1 copper ion transmembrane transporters 0 copper ion transmembrane transporter;(source:Araport11) Ipc13G0008460 AT3G53950.1 glyoxal oxidase-related protein 0 glyoxal oxidase-related protein;(source:Araport11) Ipc13G0008450 AT5G02030.1 POX (plant homeobox) family protein Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP. POX (plant homeobox) family protein;(source:Araport11) Ipc13G0008440 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc13G0008430 AT5G24080.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0008420 AT5G24080.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0008410 AT2G37840.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0008400 AT5G60020.1 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc13G0008390 AT5G44800.1 chromatin remodeling 4 0 chromatin remodeling 4;(source:Araport11) Ipc13G0008380 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0008370 AT5G02050.1 Mitochondrial glycoprotein family protein 0 Mitochondrial glycoprotein family protein;(source:Araport11) Ipc13G0008360 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0008350 AT1G06150.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a LHW-like protein with 79% amino acid identity to LHW. basic helix loop helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0008340 AT2G29150.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0008330 AT2G29150.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0008320 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0008310 AT2G29350.1 senescence-associated gene 13 senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase senescence-associated gene 13;(source:Araport11) Ipc13G0008300 AT2G29350.1 senescence-associated gene 13 senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase senescence-associated gene 13;(source:Araport11) Ipc13G0008290 AT2G37740.1 zinc-finger protein 10 0 zinc-finger protein 10;(source:Araport11) Ipc13G0008280 AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc13G0008270 AT2G37730.1 Protein of unknown function (DUF604) 0 glycosyltransferase (DUF604);(source:Araport11) Ipc13G0008260 AT3G55550.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc13G0008250 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0008240 AT5G02110.1 CYCLIN D7;1 Encodes CYCLIN D7;1. Overexpression of CYCD7;1 induces cell proliferation and cell enlargement in the embryo and endosperm leading to overgrowth. CYCLIN D7;(source:Araport11) Ipc13G0008230 AT5G02180.2 0 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc13G0008220 AT5G02190.1 Eukaryotic aspartyl protease family protein encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0008210 AT5G17290.1 autophagy protein Apg5 family Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins. autophagy protein Apg5 family;(source:Araport11) Ipc13G0008200 #N/A #N/A #N/A #N/A Ipc13G0008190 AT5G60020.1 laccase 17 LAC17 appears to have laccase activity based on enzyme assays performed using lac17 mutants. Notably, these mutants appear to have a reduced deposition of G lignin units. LAC17 is expressed in interfascicular fibers and likely contributes to lignin biosynthesis, and hence, cell wall biosynthesis, there. laccase 17;(source:Araport11) Ipc13G0008180 AT3G09320.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc13G0008170 AT2G37678.1 far-red elongated hypocotyl 1 Positive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA ( but not phyB) likely by shuttling PHYA into the nucleus. far-red elongated hypocotyl 1;(source:Araport11) Ipc13G0008160 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc13G0008150 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0008140 AT5G02240.1 NAD(P)-binding Rossmann-fold superfamily protein Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0008130 AT2G37678.1 far-red elongated hypocotyl 1 Positive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA ( but not phyB) likely by shuttling PHYA into the nucleus. far-red elongated hypocotyl 1;(source:Araport11) Ipc13G0008120 AT3G17380.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc13G0008110 AT2G17920.1 nucleic acid binding;zinc ion binding 0 nucleic acid binding / zinc ion binding protein;(source:Araport11) Ipc13G0008100 AT5G26280.1 TRAF-like family protein 0 TRAF-like family protein;(source:Araport11) Ipc13G0008090 AT5G02240.1 NAD(P)-binding Rossmann-fold superfamily protein Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0008080 AT3G09310.1 0 0 membrane protein insertion efficiency factor;(source:Araport11) Ipc13G0008070 AT2G37640.1 Barwin-like endoglucanases superfamily protein member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. Barwin-like endoglucanases superfamily protein;(source:Araport11) Ipc13G0008060 AT3G55470.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0008050 AT2G37630.1 myb-like HTH transcriptional regulator family protein Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response. myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc13G0008040 AT5G05260.2 0 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc13G0008030 AT5G05260.2 0 Encodes cytochrome P450 CYP79A2. phenylalanine N-monooxygenase-like protein;(source:Araport11) Ipc13G0008020 AT5G02320.2 myb domain protein 3r-5 Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5). myb domain protein 3r-5;(source:Araport11) Ipc13G0008010 AT3G09390.2 0 metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage metallothionein 2A;(source:Araport11) Ipc13G0008000 AT1G07630.1 pol-like 5 Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves. pol-like 5;(source:Araport11) Ipc13G0007990 AT5G02410.1 DIE2/ALG10 family Encodes ALG10, an ER-resident alpha1,2-glucosyltransferase that is required for lipid-linked oligosaccharide biosynthesis and subsequently for normal leaf development and abiotic stress response. DIE2/ALG10 family;(source:Araport11) Ipc13G0007980 AT3G20898.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0007970 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc13G0007960 AT2G34790.1 FAD-binding Berberine family protein Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes. FAD-binding Berberine family protein;(source:Araport11) Ipc13G0007950 AT2G35470.1 0 0 ribosome maturation factor;(source:Araport11) Ipc13G0007940 AT1G32260.1 0 0 envelope glycoprotein;(source:Araport11) Ipc13G0007930 AT1G74340.2 0 Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis. dolichol phosphate-mannose biosynthesis regulatory protein-like protein;(source:Araport11) Ipc13G0007920 AT1G32250.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0007910 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0007900 AT1G25350.1 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS, putative 0 glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11) Ipc13G0007890 AT5G08560.3 0 WRDR26 is a WD-40 repeat containing protein initially identified as an interacting partner RanBPM. Its expression is induced by abiotic stress as well as various plant growth regulators including IAA, ABA and ethylene. Role as a novel modulator of redox homeostatis, responding to developmental and stress signals to regulate leaf senescence. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc13G0007880 AT1G06680.1 photosystem II subunit P-1 Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. Phosphorylation of this protein is dependent on calcium. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the stroma. The mRNA is cell-to-cell mobile. photosystem II subunit P-1;(source:Araport11) Ipc13G0007870 AT5G57500.1 Galactosyltransferase family protein 0 Galactosyltransferase family protein;(source:Araport11) Ipc13G0007860 AT3G22290.2 0 0 Endoplasmic reticulum vesicle transporter protein;(source:Araport11) Ipc13G0007850 AT5G60580.3 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0007840 AT3G22330.1 putative mitochondrial RNA helicase 2 DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2;(source:Araport11) Ipc13G0007830 AT1G32210.1 Defender against death (DAD family) protein Encodes protein involved in suppression of apoptosis. Complements a mammalian apoptosis suppressor mutation. Defender against death (DAD family) protein;(source:Araport11) Ipc13G0007820 AT1G64060.1 respiratory burst oxidase protein F Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. respiratory burst oxidase protein F;(source:Araport11) Ipc13G0007810 AT2G35500.1 shikimate kinase like 2 Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro. shikimate kinase like 2;(source:Araport11) Ipc13G0007800 AT1G32240.1 Homeodomain-like superfamily protein Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis. Homeodomain-like superfamily protein;(source:Araport11) Ipc13G0007790 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0007780 AT5G46910.1 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein H3K27me3 demethylase involved in temperature and photoperiod dependent repressing of flowering. Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11) Ipc13G0007770 AT5G62230.1 ERECTA-like 1 Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. Its transcript levels change after inducing MUTE expression in a mute background. ERECTA-like 1;(source:Araport11) Ipc13G0007760 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0007750 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0007740 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc13G0007730 AT1G34300.1 lectin protein kinase family protein 0 lectin protein kinase family protein;(source:Araport11) Ipc13G0007720 AT2G01950.1 BRI1-like 2 Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein. BRI1-like 2;(source:Araport11) Ipc13G0007710 AT5G23400.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0007700 AT5G44700.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc13G0007690 AT5G24080.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0007680 AT2G16790.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0007670 AT5G45110.1 NPR1-like protein 3 Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid. The mRNA is cell-to-cell mobile. NPR1-like protein 3;(source:Araport11) Ipc13G0007660 AT1G31300.3 0 0 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11) Ipc13G0007650 AT2G30880.1 Pleckstrin homology (PH) domain-containing protein 0 Pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc13G0007640 AT4G31300.3 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein Encodes 20S proteasome subunit PBA1 (PBA1). PBA1 acts as a plant caspase-3-like enzyme. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11) Ipc13G0007630 AT1G06660.1 0 Encodes JASON. jason mutant produces diploid male gametes leading to triploid progeny. Diploid gametes in the jason mutant are generated by a defect in male meiosis II. aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit;(source:Araport11) Ipc13G0007620 AT5G03795.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc13G0007610 AT1G11430.1 plastid developmental protein DAG, putative Encodes a protein involved in RNA editing in chloroplasts. The mRNA is cell-to-cell mobile. plastid developmental protein DAG;(source:Araport11) Ipc13G0007600 AT5G48250.1 B-box type zinc finger protein with CCT domain 0 B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11) Ipc13G0007590 AT2G04240.2 RING/U-box superfamily protein Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism. RING/U-box superfamily protein;(source:Araport11) Ipc13G0007580 AT2G04280.1 0 0 calcium ion-binding protein;(source:Araport11) Ipc13G0007570 AT3G07660.1 Kinase-related protein of unknown function (DUF1296) 0 flocculation protein (DUF1296);(source:Araport11) Ipc13G0007560 AT1G50640.1 ethylene responsive element binding factor 3 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ethylene responsive element binding factor 3;(source:Araport11) Ipc13G0007550 AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0007540 AT2G04350.2 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc13G0007530 AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein 0 RPM1-interacting protein 4 (RIN4) family protein;(source:Araport11) Ipc13G0007520 AT5G48230.2 acetoacetyl-CoA thiolase 2 Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal. acetoacetyl-CoA thiolase 2;(source:Araport11) Ipc13G0007510 AT3G07700.4 0 ABC1K7 is a member of an atypical protein kinase family that is induced by salt stress. Loss of function mutations affect the metabolic profile of chloroplast lipids. It appears to function along with ABC1K8 in mediating lipid membrane changes in response to stress. Protein kinase superfamily protein;(source:Araport11) Ipc13G0007500 #N/A #N/A #N/A #N/A Ipc13G0007490 AT4G12730.1 FASCICLIN-like arabinogalactan 2 AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds FASCICLIN-like arabinogalactan 2;(source:Araport11) Ipc13G0007480 AT5G61680.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007470 AT5G07410.1 Pectin lyase-like superfamily protein Encodes a pectin methylesterase implicated in the remodeling of pectins in pollen. Its expression is restricted to the male gametophyte (dry pollen, imbibed pollen and pollen tube). Mutants do not display any phenotype in the vegetative tissues. Pollen germination of KO mutant is strongly delayed in vivo and in vitro. Extra calcium restores the wild type phenotype in vitro. Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007400 AT5G61680.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007410 AT5G61680.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007460 AT1G69940.1 Pectin lyase-like superfamily protein Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains' surrounding cells of the anthers. Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007450 AT2G05310.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0007440 AT1G69940.1 Pectin lyase-like superfamily protein Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains' surrounding cells of the anthers. Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007430 AT1G75800.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc13G0007420 AT5G61680.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007390 AT5G35840.1 phytochrome C Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development. The mRNA is cell-to-cell mobile. phytochrome C;(source:Araport11) Ipc13G0007380 AT5G35770.1 Transducin/WD40 repeat-like superfamily protein A recessive mutation in the Arabidopsis STERILE APETALA (SAP) causes severe aberrations in inflorescence and flower and ovule development. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0007370 AT4G26680.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0007360 AT2G05250.1 DNAJ heat shock N-terminal domain-containing protein 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc13G0007350 AT2G04900.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0007340 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0007330 AT5G35750.1 histidine kinase 2 Encodes histidine kinase AHK2. histidine kinase 2;(source:Araport11) Ipc13G0007320 AT5G38190.1 0 0 myosin heavy chain-like protein;(source:Araport11) Ipc13G0007310 AT5G48150.4 0 Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway. GRAS family transcription factor;(source:Araport11) Ipc13G0007300 AT3G07790.1 DGCR14-related 0 DGCR14-like protein;(source:Araport11) Ipc13G0007290 AT2G04790.2 0 0 PTB domain engulfment adapter;(source:Araport11) Ipc13G0007280 AT3G07800.1 Thymidine kinase Encodes a thymidine kinase that salvages DNA precursors. Thymidine kinase;(source:Araport11) Ipc13G0007270 AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0007260 AT1G50570.2 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0007250 AT5G47530.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc13G0007240 AT5G47530.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc13G0007230 AT2G04842.2 0 Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. threonyl-tRNA synthetase, putative / threonine-tRNA ligase;(source:Araport11) Ipc13G0007220 AT3G14040.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc13G0007210 AT5G35700.1 fimbrin-like protein 2 Encodes FIMBRIN5, an actin bundling factor required for pollen germination and pollen tube growth. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles. fimbrin-like protein 2;(source:Araport11) Ipc13G0007200 AT1G04985.1 0 0 triacylglycerol lipase-like protein;(source:Araport11) Ipc13G0007190 AT2G04570.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0007180 AT5G50630.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0007170 AT5G35690.1 0 WT-like growth phenotype mutants of WSS1B do not display hypersensitivities after treatment with DNA-Protein crosslink inducing agents like camptothecin or cis-platin. zinc metalloproteinase-like protein;(source:Araport11) Ipc13G0007160 AT2G05810.2 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0007150 AT1G05020.1 ENTH/ANTH/VHS superfamily protein 0 ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc13G0007140 AT2G05790.1 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc13G0007130 AT5G55160.1 small ubiquitin-like modifier 2 Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. small ubiquitin-like modifier 2;(source:Araport11) Ipc13G0007120 AT2G32970.4 0 0 G1/S-specific cyclin-E protein;(source:Araport11) Ipc13G0007110 AT2G05755.1 Nodulin MtN21 /EamA-like transporter family protein Nucleotide/sugar transporter family protein Nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc13G0007100 AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0007090 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0007080 AT2G32990.1 glycosyl hydrolase 9B8 0 glycosyl hydrolase 9B8;(source:Araport11) Ipc13G0007070 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc13G0007060 AT4G15415.5 0 B Prime regulatory subunit of PP2A (AtB Primegamma) Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11) Ipc13G0007050 AT2G32650.2 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0007040 AT4G15417.1 RNAse II-like 1 0 RNAse II-like 1;(source:Araport11) Ipc13G0007030 AT1G06950.1 translocon at the inner envelope membrane of chloroplasts 110 Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis. C-terminal half of Tic110 functions as scaffolds for protein-protein interactions. translocon at the inner envelope membrane of chloroplasts 110;(source:Araport11) Ipc13G0007020 AT4G15417.1 RNAse II-like 1 0 RNAse II-like 1;(source:Araport11) Ipc13G0007010 AT2G32590.1 0 0 condensin complex subunit;(source:Araport11) Ipc13G0007000 AT5G55310.1 DNA topoisomerase 1 beta Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality. DNA topoisomerase 1 beta;(source:Araport11) Ipc13G0006990 AT4G20720.1 dentin sialophosphoprotein-related 0 dentin sialophosphoprotein-like protein;(source:Araport11) Ipc13G0006980 AT3G20800.1 Cell differentiation, Rcd1-like protein 0 Cell differentiation, Rcd1-like protein;(source:Araport11) Ipc13G0006970 AT2G32520.4 0 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0006960 AT1G62300.1 WRKY family transcription factor Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress. WRKY family transcription factor;(source:Araport11) Ipc13G0006950 AT3G18150.1 RNI-like superfamily protein 0 RNI-like superfamily protein;(source:Araport11) Ipc13G0006940 AT3G59250.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc13G0006930 AT5G42510.1 Disease resistance-responsive (dirigent-like protein) family protein 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc13G0006920 AT1G05120.1 Helicase protein with RING/U-box domain 0 Helicase protein with RING/U-box domain-containing protein;(source:Araport11) Ipc13G0006910 AT2G37870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0006900 AT4G12560.3 0 Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc13G0006890 AT1G29070.1 Ribosomal protein L34 0 Ribosomal protein L34;(source:Araport11) Ipc13G0006880 AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 38;(source:Araport11) Ipc13G0006870 AT1G28960.7 0 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 15;(source:Araport11) Ipc13G0006860 AT1G29040.1 0 0 50S ribosomal protein L34;(source:Araport11) Ipc13G0006850 AT4G18570.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0006840 AT5G45910.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006830 AT1G28610.2 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006820 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006810 AT1G28600.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006800 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006790 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006780 AT1G28580.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006770 AT1G28600.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006760 AT1G28600.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006750 #N/A #N/A #N/A #N/A Ipc13G0006740 AT5G01320.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 0 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein;(source:Araport11) Ipc13G0006730 AT2G31090.1 0 Encodes a signalling peptide influencing lateral organ separation. transmembrane protein;(source:Araport11) Ipc13G0006720 AT1G28570.2 SGNH hydrolase-type esterase superfamily protein 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc13G0006710 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006700 AT1G29020.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0006690 AT4G18490.7 0 0 hypothetical protein;(source:Araport11) Ipc13G0006680 AT4G18460.1 D-Tyr-tRNA(Tyr) deacylase family protein 0 D-Tyr-tRNA(Tyr) deacylase family protein;(source:Araport11) Ipc13G0006670 AT5G45960.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006660 AT2G44850.3 0 0 hypothetical protein;(source:Araport11) Ipc13G0006650 AT2G44880.5 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0006640 AT5G45960.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006630 AT5G45960.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc13G0006620 AT4G18450.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc13G0006610 AT3G23240.1 ethylene response factor 1 encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. ethylene response factor 1;(source:Araport11) Ipc13G0006600 AT1G06280.1 LOB domain-containing protein 2 0 LOB domain-containing protein 2;(source:Araport11) Ipc13G0006590 AT5G45980.1 WUSCHEL related homeobox 8 Arabidopsis thaliana WOX8 protein. Contains similarity to homeodomain transcription factor. Positively regulates early embryonic growth. Together with CLE8 it forms a signaling module that promotes seed growth and overall seed size. WUSCHEL related homeobox 8;(source:Araport11) Ipc13G0006580 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc13G0006570 AT5G46020.1 0 MUSE7 was identified in a forward genetic screen to identify snc1 enhancers using a mos4 snc1 background. muse7 mos4 snc1 plants are morphologiclly similar to snc1 plants with slightly twisted leaves. The triple mutant also shows PR gene activation and enhanced resistance to pathogens, like the snc1 single mutant. It is a single copy gene conserved in plants and metazoans.MUSE7 encodes an evolutionarily conserved putative kinase substrate of unknown function that affects the accumulation of NLR proteins. 28 kDa heat/acid-stable phosphoprotein-like protein;(source:Araport11) Ipc13G0006560 AT3G12420.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0006550 AT5G46060.1 Protein of unknown function, DUF599 0 spastin, putative (Protein of unknown function, DUF599);(source:Araport11) Ipc13G0006540 AT2G33860.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. ETT is also a target of AP2; integrateing the functions of AGAMOUS and APETALA2 in floral meristem determinacy. Positive regulation of drought stress response genes. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein;(source:Araport11) Ipc13G0006530 AT1G28480.1 Thioredoxin superfamily protein Encodes GRX480, a member of the glutaredoxin family that regulates protein redox state. GRX480 interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. GRX480 transcription is SA-inducible and requires NPR1. Maybe involved in SA/JA cross-talk. It has also been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. Thioredoxin superfamily protein;(source:Araport11) Ipc13G0006520 AT5G53980.1 homeobox protein 52 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 52;(source:Araport11) Ipc13G0006510 AT1G69490.1 NAC-like, activated by AP3/PI Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. The mRNA is cell-to-cell mobile. NAC-like, activated by AP3/PI;(source:Araport11) Ipc13G0006500 AT5G46070.1 Guanylate-binding family protein 0 Guanylate-binding family protein;(source:Araport11) Ipc13G0006490 AT4G28500.1 NAC domain containing protein 73 0 NAC domain containing protein 73;(source:Araport11) Ipc13G0006480 AT1G28440.1 HAESA-like 1 0 HAESA-like 1;(source:Araport11) Ipc13G0006470 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0006460 AT5G44180.3 0 0 Homeodomain-like transcriptional regulator;(source:Araport11) Ipc13G0006450 AT2G20560.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc13G0006440 AT1G03820.1 0 0 E6-like protein;(source:Araport11) Ipc13G0006430 AT3G17950.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0006420 AT3G05700.1 Drought-responsive family protein Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress. Drought-responsive family protein;(source:Araport11) Ipc13G0006410 AT1G28380.1 MAC/Perforin domain-containing protein This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots. The mRNA is cell-to-cell mobile. MAC/Perforin domain-containing protein;(source:Araport11) Ipc13G0006400 AT5G44210.1 erf domain protein 9 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. erf domain protein 9;(source:Araport11) Ipc13G0006390 AT1G28360.1 ERF domain protein 12 encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. ERF domain protein 12;(source:Araport11) Ipc13G0006380 AT5G60200.1 TARGET OF MONOPTEROS 6 Encodes a Dof-type transcription factor. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division. TARGET OF MONOPTEROS 6;(source:Araport11) Ipc13G0006370 AT1G28260.2 Telomerase activating protein Est1 0 Telomerase activating protein Est1;(source:Araport11) Ipc13G0006360 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc13G0006350 AT1G28280.2 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc13G0006340 AT2G33790.1 arabinogalactan protein 30 pollen Ole e 1 allergen protein containing 14.6% proline residues, similar to arabinogalactan protein (Daucus carota) GI:11322245, SP:Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family arabinogalactan protein 30;(source:Araport11) Ipc13G0006330 AT4G20980.4 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11) Ipc13G0006320 AT5G58950.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0006310 AT3G09360.3 0 0 Cyclin/Brf1-like TBP-binding protein;(source:Araport11) Ipc13G0006300 AT4G32480.1 Protein of unknown function (DUF506) 0 sugar phosphate exchanger, putative (DUF506);(source:Araport11) Ipc13G0006290 AT1G28240.1 Protein of unknown function (DUF616) 0 strawberry notch protein (DUF616);(source:Araport11) Ipc13G0006280 AT4G21710.1 DNA-directed RNA polymerase family protein Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit. DNA-directed RNA polymerase family protein;(source:Araport11) Ipc13G0006270 AT2G33793.2 0 Encodes a protein component of the pre-synaptic chromosome axis. Mutants show quantitative defects in meiotic recombination. Interacts with ASY1/ASY3. DNA ligase-like protein;(source:Araport11) Ipc13G0006260 AT1G02680.1 TBP-associated factor 13 Encodes a TBP-Associated Factor (TAF) that functions together with PRC2 in transcriptional regulation during seed development. TBP-associated factor 13;(source:Araport11) Ipc13G0006250 AT4G03510.4 0 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity. RING membrane-anchor 1;(source:Araport11) Ipc13G0006240 AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0006230 AT5G62020.1 heat shock transcription factor B2A member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile. heat shock transcription factor B2A;(source:Araport11) Ipc13G0006220 AT4G04950.1 thioredoxin family protein Encodes a monothiol glutaredoxin that is a critical component involved in ROS accumulation, auxin signaling, and temperature-dependent postembryonic growth in plants. It has been shown to associate with the cytosolic Fe-S assembly (CIA) complex and contributes to, but is not essential for, the correct functioning of client Fe-S proteins in unchallenged conditions. thioredoxin family protein;(source:Araport11) Ipc13G0006210 #N/A #N/A #N/A #N/A Ipc13G0006200 AT4G27450.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc13G0006190 AT1G48320.1 Thioesterase superfamily protein Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis. Thioesterase superfamily protein;(source:Araport11) Ipc13G0006180 AT2G20740.1 Tetraspanin family protein 0 Tetraspanin family protein;(source:Araport11) Ipc13G0006170 AT4G04930.1 fatty acid desaturase family protein Encodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues. fatty acid desaturase family protein;(source:Araport11) Ipc13G0006160 AT3G47160.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0006150 AT5G41950.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0006140 AT5G53750.1 CBS domain-containing protein 0 CBS domain-containing protein;(source:Araport11) Ipc13G0006130 AT2G20760.1 Clathrin light chain protein 0 Clathrin light chain protein;(source:Araport11) Ipc13G0006120 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0006110 AT4G02340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0006100 AT3G51000.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0006090 AT1G61050.2 0 0 alpha 1,4-glycosyltransferase family protein;(source:Araport11) Ipc13G0006080 AT4G21660.1 proline-rich spliceosome-associated (PSP) family protein 0 proline-rich spliceosome-associated (PSP) family protein;(source:Araport11) Ipc13G0006070 AT1G61065.1 Protein of unknown function (DUF1218) 0 1,3-beta-glucan synthase component (DUF1218);(source:Araport11) Ipc13G0006060 AT3G53110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. The mRNA is cell-to-cell mobile. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0006050 #N/A #N/A #N/A #N/A Ipc13G0006040 AT1G11070.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0006030 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc13G0006020 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc13G0006010 AT1G26330.1 DNA binding 0 DNA binding protein;(source:Araport11) Ipc13G0006000 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc13G0005990 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc13G0005980 AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc13G0005970 AT1G61120.1 terpene synthase 04 Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. The mRNA is cell-to-cell mobile. terpene synthase 04;(source:Araport11) Ipc13G0005960 AT1G61120.1 terpene synthase 04 Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. The mRNA is cell-to-cell mobile. terpene synthase 04;(source:Araport11) Ipc13G0005950 AT1G11080.2 serine carboxypeptidase-like 31 0 serine carboxypeptidase-like 31;(source:Araport11) Ipc13G0005940 AT1G61140.3 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related 0 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc13G0005930 AT1G61150.9 0 0 LisH and RanBPM domains containing protein;(source:Araport11) Ipc13G0005920 AT1G11112.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0005910 AT1G11120.2 0 0 CTTNBP 2 amino-terminal-like protein;(source:Araport11) Ipc13G0005900 AT1G11125.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0005890 AT4G03390.2 0 0 STRUBBELIG-receptor family 3;(source:Araport11) Ipc13G0005880 AT3G25150.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain 0 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11) Ipc13G0005870 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005850 AT2G35190.1 novel plant snare 11 plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate. Putative plant snare 11;(source:Araport11) Ipc13G0005860 #N/A #N/A #N/A #N/A Ipc13G0005840 AT4G38830.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 26 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 26;(source:Araport11) Ipc13G0005830 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005820 AT4G21410.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 29;(source:Araport11) Ipc13G0005810 AT1G61210.3 0 DWA3 encodes a DWD(DDB1 binding WD40) protein. Invitro analyses suggest its involvement in the negative regulation of ABA responses.One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0005800 AT1G61250.1 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc13G0005790 AT5G55870.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0005780 AT5G51170.3 0 0 U6 snRNA phosphodiesterase-like protein;(source:Araport11) Ipc13G0005770 AT4G21620.1 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc13G0005760 AT5G54390.1 HAL2-like Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. The mRNA is cell-to-cell mobile. HAL2-like protein;(source:Araport11) Ipc13G0005750 AT1G11190.1 bifunctional nuclease i Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops). bifunctional nuclease i;(source:Araport11) Ipc13G0005740 AT5G17570.1 TatD related DNase 0 TatD related DNase;(source:Araport11) Ipc13G0005730 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc13G0005720 AT5G54310.1 ARF-GAP domain 5 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation. ARF-GAP domain 5;(source:Araport11) Ipc13G0005710 AT1G61260.1 Protein of unknown function (DUF761) 0 cotton fiber (DUF761);(source:Araport11) Ipc13G0005700 AT4G32010.2 0 0 HSI2-like 1;(source:Araport11) Ipc13G0005690 AT4G21540.1 sphingosine kinase 1 Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination. sphingosine kinase 1;(source:Araport11) Ipc13G0005680 AT2G18750.3 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc13G0005670 AT4G21530.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0005660 AT4G21520.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0005650 AT1G47370.1 Toll-Interleukin-Resistance (TIR) domain family protein RBA1 variant in Ag0 background is a TIR-only receptor protein that binds to the bacterial type III effector protein HopBA. The Col-0 variant, which is not expressed, is likely a psuedogene and more highly methylated than the Ag0 variant which is expressed. Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc13G0005640 AT1G61340.2 F-box family protein Encodes a F-box protein induced by various biotic or abiotic stress. F-box family protein;(source:Araport11) Ipc13G0005630 AT4G18340.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc13G0005620 AT2G22010.2 related to KPC1 Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein. related to KPC1;(source:Araport11) Ipc13G0005610 AT4G21500.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0005590 AT2G26150.4 0 member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay. heat shock transcription factor A2;(source:Araport11) Ipc13G0005600 AT3G63350.1 winged-helix DNA-binding transcription factor family protein member of Heat Stress Transcription Factor (Hsf) family winged-helix DNA-binding transcription factor family protein;(source:Araport11) Ipc13G0005580 AT3G62980.1 F-box/RNI-like superfamily protein Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis. F-box/RNI-like superfamily protein;(source:Araport11) Ipc13G0005570 AT1G11260.1 sugar transporter 1 Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile. sugar transporter 1;(source:Araport11) Ipc13G0005560 AT4G21440.1 MYB-like 102 Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family. MYB-like 102;(source:Araport11) Ipc13G0005550 AT1G11390.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0005540 AT2G04420.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0005530 AT5G22130.3 0 member of Glycosyltransferase Family- 50 mannosyltransferase family protein;(source:Araport11) Ipc13G0005520 AT3G61510.1 ACC synthase 1 Encodes a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. The gene is transcriptionally active but enzymatically inactive. The predicted amino-acid sequence of ACS1 is missing the highly conserved tripeptide, Thr-Asn-Pro (TNP), between Ile204 and Ser205. Introduction of TNP into ACS1 restores the ACS activity. ACC synthase 1;(source:Araport11) Ipc13G0005510 AT4G05120.2 0 Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine. Major facilitator superfamily protein;(source:Araport11) Ipc13G0005500 AT4G05150.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc13G0005490 AT1G11380.1 PLAC8 family protein 0 PLAC8 family protein;(source:Araport11) Ipc13G0005480 AT1G11360.4 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc13G0005470 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0005460 AT5G54470.1 B-box type zinc finger family protein 0 B-box type zinc finger family protein;(source:Araport11) Ipc13G0005450 AT1G78990.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc13G0005440 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc13G0005430 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0005420 AT3G11460.1 Pentatricopeptide repeat (PPR) superfamily protein Encodes a DYW PPR protein that is involved in editing the mitochondrial NAD2 transcript at the site nad2-842. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0005410 AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc13G0005400 AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc13G0005390 AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc13G0005380 AT1G11300.1 protein serine/threonine kinases;protein kinases;ATP binding;sugar binding;kinases;carbohydrate binding The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation. G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc13G0005370 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc13G0005360 AT4G27290.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc13G0005350 AT1G61660.7 0 Encodes a transcriptional activator that regulates the expression of genes by binding to their GCG- or E-boxes to mediate physiological responses, including proline biosynthesis and ROS scavenging pathways, to enhance stress tolerance. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0005340 AT1G61680.2 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0005330 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0005320 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0005310 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0005300 AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0005290 AT4G16730.2 0 In the Col ecotype, no functional protein is encoded at this locus due to the presence of a two-base (AT) insertion 184 nucleotides downstream of the start codon leading to a frame shift and premature translational termination. However, in the Ws ecotype, a functional terpene synthase that localizes to the chloroplast is encoded at this locus. It can catalyze the synthesis of (E)-beta-ocimene and (E,E)-alpha farnesene in vitro, but, it has more activity as an (E)-beta-ocimene synthase activity in vivo. This may reflect the greater availability of the GPP precursor of (E)-beta-ocimene than of the FPP precursor of (E,E)-alpha-farnesene in the chloroplasts where the Ws TPS02 is present. terpene synthase 02;(source:Araport11) Ipc13G0005280 AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc13G0005270 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc13G0005260 AT1G61680.1 terpene synthase 14 0 terpene synthase 14;(source:Araport11) Ipc13G0005250 AT3G13150.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0005240 AT1G55890.1 Tetratricopeptide repeat (TPR)-like superfamily protein Ribosomal pentatricopeptide repeat protein Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0005230 AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc13G0005220 AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0 Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11) Ipc13G0005210 AT3G25830.1 terpene synthase-like sequence-1,8-cineole Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830. terpene synthase-like sequence-1,8-cineole;(source:Araport11) Ipc13G0005200 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc13G0005190 AT4G21310.1 Protein of unknown function (DUF1218) DUF1218 family member. transmembrane protein, putative (DUF1218);(source:Araport11) Ipc13G0005180 AT1G61740.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc13G0005170 AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc13G0005160 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc13G0005150 AT4G05200.2 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005140 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005130 AT4G23180.3 0 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005120 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc13G0005110 AT3G42170.2 0 transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. BED zinc finger and hAT dimerization domain-containing protein DAYSLEEPER;(source:Araport11) Ipc13G0005100 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005090 AT4G25000.1 alpha-amylase-like Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). alpha-amylase-like protein;(source:Araport11) Ipc13G0005080 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005070 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005060 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005050 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005040 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005030 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005020 AT4G05200.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RLK (RECEPTOR-like protein kinase) 25;(source:Araport11) Ipc13G0005010 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc13G0005000 AT4G21220.1 Trimeric LpxA-like enzymes superfamily protein 0 Trimeric LpxA-like enzymes superfamily protein;(source:Araport11) Ipc13G0004990 AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0004980 AT4G21215.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0004970 AT4G21200.1 gibberellin 2-oxidase 8 Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins. gibberellin 2-oxidase 8;(source:Araport11) Ipc13G0004960 AT5G54770.1 thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4) Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer. The mRNA is cell-to-cell mobile. thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4);(source:Araport11) Ipc13G0004950 AT1G61790.2 0 Encodes the OST3/6 subunit of the hetero-oligomeric plant oligosaccharyltransferase complex (OST). Also identified by GWAS as having a role in interspecific pollen tube recognition. Oligosaccharyltransferase complex/magnesium transporter family protein;(source:Araport11) Ipc13G0004940 AT1G11570.3 0 0 NTF2-like protein;(source:Araport11) Ipc13G0004930 AT1G11580.1 methylesterase PCR A 0 methylesterase PCR A;(source:Araport11) Ipc13G0004920 AT4G04900.2 0 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings. ROP-interactive CRIB motif-containing protein 10;(source:Araport11) Ipc13G0004910 AT3G20580.1 COBRA-like protein 10 precursor 0 COBRA-like protein 10 precursor;(source:Araport11) Ipc13G0004900 AT5G28237.1 Pyridoxal-5'-phosphate-dependent enzyme family protein 0 Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11) Ipc13G0004890 AT1G61820.1 beta glucosidase 46 0 beta glucosidase 46;(source:Araport11) Ipc13G0004880 AT4G21770.1 Pseudouridine synthase family protein 0 Pseudouridine synthase family protein;(source:Araport11) Ipc13G0004870 AT1G11600.1 cytochrome P450, family 77, subfamily B, polypeptide 1 member of CYP77B cytochrome P450, family 77, subfamily B, polypeptide 1;(source:Araport11) Ipc13G0004860 AT4G04880.1 adenosine/AMP deaminase family protein 0 adenosine/AMP deaminase family protein;(source:Araport11) Ipc13G0004850 AT1G61850.2 phospholipases;galactolipases Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea. phospholipase A I-like protein;(source:Araport11) Ipc13G0004840 AT1G48880.1 TRICHOME BIREFRINGENCE-LIKE 7 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 7;(source:Araport11) Ipc13G0004830 AT4G21780.3 0 0 hypothetical protein;(source:Araport11) Ipc13G0004820 AT3G20530.1 Protein kinase superfamily protein Protein kinase superfamily protein, expressed in the peroxisome. Protein kinase superfamily protein;(source:Araport11) Ipc13G0004810 AT4G21790.1 tobamovirus multiplication 1 encodes a host factor that is required for TMV virus multiplication. The mRNA is cell-to-cell mobile. tobamovirus multiplication 1;(source:Araport11) Ipc13G0004800 AT4G04860.1 DERLIN-2.2 0 DERLIN-2.2;(source:Araport11) Ipc13G0004790 AT5G52890.1 AT hook motif-containing protein 0 AT hook motif-containing protein;(source:Araport11) Ipc13G0004780 AT4G04640.1 ATPase, F1 complex, gamma subunit protein One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase. ATPase, F1 complex, gamma subunit protein;(source:Araport11) Ipc13G0004770 AT4G31890.3 0 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0004760 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc13G0004750 AT4G21960.1 Peroxidase superfamily protein Encodes AT4g21960 (AT4g21960/T8O5_170). The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc13G0004740 AT3G13140.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0004730 AT3G07610.3 Transcription factor jumonji (jmjC) domain-containing protein IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermethylation. Aberrant phenotypes in ibm1 mutants in both DNA methylation and plant development can be suppressed by mutations in the KYP H3K9 methyltransferase or the CMT3 non CG-cytosine methylase. Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11) Ipc13G0004720 AT3G20340.1 0 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. protein expression protein;(source:Araport11) Ipc13G0004710 AT3G04130.2 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0004700 AT1G61900.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0004690 AT1G61890.3 0 0 MATE efflux family protein;(source:Araport11) Ipc13G0004680 AT3G21690.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc13G0004670 AT1G62050.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc13G0004660 AT4G21990.1 APS reductase 3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APS reductase 3;(source:Araport11) Ipc13G0004650 AT1G11820.2 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc13G0004640 AT2G22620.2 Rhamnogalacturonate lyase family protein 0 Rhamnogalacturonate lyase family protein;(source:Araport11) Ipc13G0004630 AT4G22010.1 SKU5 similar 4 0 SKU5 similar 4;(source:Araport11) Ipc13G0004620 AT4G22030.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein with a domain protein;(source:Araport11) Ipc13G0004610 AT1G11910.1 aspartic proteinase A1 Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). aspartic proteinase A1;(source:Araport11) Ipc13G0004600 AT4G04450.1 WRKY family transcription factor member of WRKY Transcription Factor; Group II-b WRKY family transcription factor;(source:Araport11) Ipc13G0004590 AT4G22080.1 root hair specific 14 0 root hair specific 14;(source:Araport11) Ipc13G0004580 AT1G11930.2 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0 Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11) Ipc13G0004570 AT4G04370.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0004560 AT4G04330.1 Chaperonin-like RbcX protein Encodes a chloroplast thylakoid localized RbcX protein that acts as a chaperone in the folding of Rubisco. Chaperonin-like RbcX protein;(source:Araport11) Ipc13G0004550 AT4G04320.1 malonyl-CoA decarboxylase family protein 0 malonyl-CoA decarboxylase family protein;(source:Araport11) Ipc13G0004540 AT1G62330.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0004530 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc13G0004520 AT1G62360.1 KNOX/ELK homeobox transcription factor Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. It has also been shown to have a role in the specification of flower meristem identity. KNOX/ELK homeobox transcription factor;(source:Araport11) Ipc13G0004510 AT4G04210.1 plant UBX domain containing protein 4 Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4) plant UBX domain containing protein 4;(source:Araport11) Ipc13G0004500 AT4G04180.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0004490 AT1G12000.1 Phosphofructokinase family protein 0 Phosphofructokinase family protein;(source:Araport11) Ipc13G0004480 AT3G18670.2 0 0 Ankyrin repeat family protein;(source:Araport11) Ipc13G0004470 AT4G22240.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc13G0004450 AT4G03965.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0004460 AT1G11990.2 0 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0004440 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc13G0004430 AT1G62390.1 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein;(source:Araport11) Ipc13G0004420 AT4G22260.1 Alternative oxidase family protein Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues. Alternative oxidase family protein;(source:Araport11) Ipc13G0004410 AT3G20300.1 Protein of unknown function (DUF3537) 0 extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11) Ipc13G0004400 AT3G25070.1 RPM1 interacting protein 4 Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is 'guarded' by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto. The mRNA is cell-to-cell mobile. RPM1 interacting protein 4;(source:Araport11) Ipc13G0004390 AT4G22290.1 Ubiquitin-specific protease family C19-related protein Paralog of SHOU4-like Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc13G0004380 AT1G12020.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0004370 AT3G01435.4 0 0 Expressed protein;(source:Araport11) Ipc13G0004360 AT4G22320.2 0 0 golgin family A protein;(source:Araport11) Ipc13G0004350 AT1G74050.1 Ribosomal protein L6 family protein 0 Ribosomal protein L6 family protein;(source:Araport11) Ipc13G0004340 AT1G62420.1 Protein of unknown function (DUF506) 0 DUF506 family protein (DUF506);(source:Araport11) Ipc13G0004330 AT1G48490.3 Protein kinase superfamily protein Protein kinase which together with IREH1 plays an important role in controlling root skewing and maintaining the microtubule network. Protein kinase superfamily protein;(source:Araport11) Ipc13G0004320 AT4G08350.1 global transcription factor group A2 0 global transcription factor group A2;(source:Araport11) Ipc13G0004310 AT5G55350.1 MBOAT (membrane bound O-acyl transferase) family protein 0 MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11) Ipc13G0004300 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc13G0004290 AT4G12590.1 Protein of unknown function DUF106, transmembrane 0 ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane);(source:Araport11) Ipc13G0004280 AT4G12570.1 ubiquitin protein ligase 5 Knock-out mutants showed accelerated senescence of leaves. The mRNA is cell-to-cell mobile. ubiquitin protein ligase 5;(source:Araport11) Ipc13G0004270 AT5G47560.1 tonoplast dicarboxylate transporter Encodes a tonoplast malate/fumarate transporter. tonoplast dicarboxylate transporter;(source:Araport11) Ipc13G0004260 AT5G47550.1 Cystatin/monellin superfamily protein Putative phytocystatin expressed in seedlings and induced by heat stress and abscisic acid. Overexpression increases germination rate and heat stress tolerance. CYS5 is a target of ABF1 and ABF3 transcriptional regulators which bind to its promoter. Cystatin/monellin superfamily protein;(source:Araport11) Ipc13G0004250 AT5G47550.1 Cystatin/monellin superfamily protein Putative phytocystatin expressed in seedlings and induced by heat stress and abscisic acid. Overexpression increases germination rate and heat stress tolerance. CYS5 is a target of ABF1 and ABF3 transcriptional regulators which bind to its promoter. Cystatin/monellin superfamily protein;(source:Araport11) Ipc13G0004240 AT5G47550.1 Cystatin/monellin superfamily protein Putative phytocystatin expressed in seedlings and induced by heat stress and abscisic acid. Overexpression increases germination rate and heat stress tolerance. CYS5 is a target of ABF1 and ABF3 transcriptional regulators which bind to its promoter. Cystatin/monellin superfamily protein;(source:Araport11) Ipc13G0004230 AT5G47550.1 Cystatin/monellin superfamily protein Putative phytocystatin expressed in seedlings and induced by heat stress and abscisic acid. Overexpression increases germination rate and heat stress tolerance. CYS5 is a target of ABF1 and ABF3 transcriptional regulators which bind to its promoter. Cystatin/monellin superfamily protein;(source:Araport11) Ipc13G0004220 AT5G47540.1 Mo25 family protein 0 Mo25 family protein;(source:Araport11) Ipc13G0004210 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0004200 AT1G59750.2 auxin response factor 1 Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions. auxin response factor 1;(source:Araport11) Ipc13G0004190 AT5G13900.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0004180 AT1G59760.1 RNA helicase, ATP-dependent, SK12/DOB1 protein Encodes MTR4, a putative RNA helicase and exosome co-factor. Required for proper rRNA biogenesis and development. RNA helicase, ATP-dependent, SK12/DOB1 protein;(source:Araport11) Ipc13G0004170 AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0004160 AT5G49160.1 methyltransferase 1 Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation. The mRNA is cell-to-cell mobile. methyltransferase 1;(source:Araport11) Ipc13G0004150 AT5G49160.2 0 Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation.The mRNA is cell-to-cell mobile. methyltransferase 1;(source:Araport11) Ipc13G0004140 AT5G49890.1 chloride channel C member of Anion channel protein family chloride channel C;(source:Araport11) Ipc13G0004130 AT4G13370.1 Plant protein of unknown function (DUF936) Member of a novel, plant specific family of microtubule associated proteins. serine/arginine repetitive matrix protein, putative (DUF936);(source:Araport11) Ipc13G0004120 AT1G10280.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc13G0004110 AT1G10270.1 glutamine-rich protein 23 0 glutamine-rich protein 23;(source:Araport11) Ipc13G0004100 AT4G18530.1 Protein of unknown function (DUF707) 0 lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707);(source:Araport11) Ipc13G0004090 AT5G63700.1 zinc ion binding;DNA binding 0 zinc ion binding / DNA binding protein;(source:Araport11) Ipc13G0004080 AT1G57680.3 0 0 plasminogen activator inhibitor;(source:Araport11) Ipc13G0004070 #N/A #N/A #N/A #N/A Ipc13G0004060 AT3G11730.1 Ras-related small GTP-binding family protein Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein. Ras-related small GTP-binding family protein;(source:Araport11) Ipc13G0004050 AT1G09630.1 RAB GTPase 11C Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate. RAB GTPase 11C;(source:Araport11) Ipc13G0004040 AT1G09645.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0004030 AT1G57770.1 FAD/NAD(P)-binding oxidoreductase family protein 0 FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc13G0004020 AT1G09840.9 0 0 shaggy-like protein kinase 41;(source:Araport11) Ipc13G0004010 AT5G49910.1 chloroplast heat shock protein 70-2 Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile. chloroplast heat shock protein 70-2;(source:Araport11) Ipc13G0004000 AT4G24290.3 0 0 MAC/Perforin domain-containing protein;(source:Araport11) Ipc13G0003990 AT1G09812.1 0 0 multidrug resistance protein;(source:Araport11) Ipc13G0003980 AT5G58890.1 AGAMOUS-like 82 0 AGAMOUS-like 82;(source:Araport11) Ipc13G0003970 AT1G58025.5 0 0 DNA-binding bromodomain-containing protein;(source:Araport11) Ipc13G0003960 AT1G07360.1 CCCH-type zinc fingerfamily protein with RNA-binding domain Encodes MAC5A, a component of the MOS4-associated complex (MAC) that contributes to snc1- mediated autoimmunity. MAC is a highly conserved nuclear protein complex associated with the spliceosome. Homologues include AT1G07360 (MAC5A), AT2G29580 (MAC5B) and AT5G07060 (MAC5C). CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11) Ipc13G0003950 AT1G78560.1 Sodium Bile acid symporter family Chloroplast inner membrane, pantothenate transporter. Sodium Bile acid symporter family;(source:Araport11) Ipc13G0003940 AT5G49960.1 0 0 ion channel protein;(source:Araport11) Ipc13G0003930 AT1G15380.2 Lactoylglutathione lyase / glyoxalase I family protein Glyoxalase which affects ABA?JA crosstalk. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc13G0003920 AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein 0 Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc13G0003910 AT1G34340.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0003900 AT4G24330.1 Protein of unknown function (DUF1682) 0 hypothetical protein (DUF1682);(source:Araport11) Ipc13G0003890 AT5G49940.1 NIFU-like protein 2 Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast. NIFU-like protein 2;(source:Araport11) Ipc13G0003880 AT1G71900.1 Protein of unknown function (DUF803) 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc13G0003870 AT1G58100.1 TCP family transcription factor Encodes TCP8, belongs to the TCP transcription factor family known to bind site II elements in promoter regions. TCP family transcription factor;(source:Araport11) Ipc13G0003860 AT5G23170.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0003850 AT4G06634.1 zinc finger (C2H2 type) family protein Encodes an ABA responsive C2H2-type zinc finger transcription factor with both transcriptional repression and activation domains, that binds a G-rich, 11-bp DNA-binding motif. YY1 binds to the promoter of ABR1 and disruption represses ABA- and salt-induced ABR1 expression. zinc finger (C2H2 type) family protein;(source:Araport11) Ipc13G0003840 AT3G29810.1 COBRA-like protein 2 precursor During the course of seed coat epidermal cell differentiation, COBRA-LIKE 2 plays a role in cellulose deposition into mucilage secretory cells of Arabidopsis seeds. COBRA-LIKE 2 affects mucilage solubility and cellulosic ray formation. COBRA-like protein 2 precursor;(source:Araport11) Ipc13G0003830 AT1G58110.2 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0003820 AT4G20020.2 0 Encodes a protein involved in RNA editing in mitochondria. Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing. multiple organellar RNA editing factor;(source:Araport11) Ipc13G0003810 AT1G60940.2 SNF1-related protein kinase 2.10 encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. SNF1-related protein kinase 2.10;(source:Araport11) Ipc13G0003800 AT1G22940.1 thiamin biosynthesis protein, putative Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media. thiamin biosynthesis protein;(source:Araport11) Ipc13G0003790 AT1G19000.2 Homeodomain-like superfamily protein 0 Homeodomain-like superfamily protein;(source:Araport11) Ipc13G0003780 AT1G10930.1 DNA helicase (RECQl4A) DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. DNA helicase (RECQl4A);(source:Araport11) Ipc13G0003770 AT4G33940.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0003760 AT4G33940.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0003750 AT1G22930.1 T-complex protein 11 0 T-complex protein 11;(source:Araport11) Ipc13G0003740 AT1G36370.1 serine hydroxymethyltransferase 7 Encodes a nuclear localised protein MSA1 (MORE SULPHUR ACCUMULATION1). Epigenetically regulates sulphur homeostasis. Has sequence similarity to SHM (serine hydroxymethyltransferase) but lacks SHM activity in vitro. serine hydroxymethyltransferase 7;(source:Araport11) Ipc13G0003730 AT1G22030.1 0 0 BPS1-like protein;(source:Araport11) Ipc13G0003720 AT4G22200.1 potassium transport 2/3 Encodes AKT2, a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential. AKT2 belongs to the Shaker family K+ channels which include the following groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). potassium transport 2/3;(source:Araport11) Ipc13G0003710 AT1G11040.1 HSP40/DnaJ peptide-binding protein 0 HSP40/DnaJ peptide-binding protein;(source:Araport11) Ipc13G0003700 AT1G60990.3 Glycine cleavage T-protein family Encodes a chloroplast-localized COG0354 protein that requires folate for its function in Fe/S cluster biogenesis. Glycine cleavage T-protein family;(source:Araport11) Ipc13G0003690 AT2G28680.1 RmlC-like cupins superfamily protein 0 RmlC-like cupins superfamily protein;(source:Araport11) Ipc13G0003680 AT5G56790.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0003670 AT2G17390.1 ankyrin repeat-containing 2B Highly homologous to AKR2A. Involved in chloroplast biogenesis. Double mutants of AKR2A and AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes. The mRNA is cell-to-cell mobile. ankyrin repeat-containing 2B;(source:Araport11) Ipc13G0003660 AT1G60870.1 maternal effect embryo arrest 9 0 maternal effect embryo arrest 9;(source:Araport11) Ipc13G0003650 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0003640 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0003630 AT2G34930.1 disease resistance family protein / LRR family protein 0 disease resistance family protein / LRR family protein;(source:Araport11) Ipc13G0003620 AT1G60360.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0003610 AT3G06470.1 GNS1/SUR4 membrane protein family ELO family protein containing a characteristic histidine motif which binds to AtCb5-B, interacts with AtBI-1. Together with AtCb5-B interacts with KCR1, PAS2, and CER10, which are essential for the synthesis of VLCFAs. GNS1/SUR4 membrane protein family;(source:Araport11) Ipc13G0003600 AT1G71240.2 Plant protein of unknown function (DUF639) 0 chromosome-partitioning protein, putative (DUF639);(source:Araport11) Ipc13G0003590 AT3G26070.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc13G0003580 AT3G26070.1 Plastid-lipid associated protein PAP / fibrillin family protein 0 Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11) Ipc13G0003570 AT2G26070.1 Protein of unknown function (DUF778) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1. protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778);(source:Araport11) Ipc13G0003560 AT2G02850.1 plantacyanin Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil. plantacyanin;(source:Araport11) Ipc13G0003550 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc13G0003540 AT3G54630.1 0 0 kinetochore protein;(source:Araport11) Ipc13G0003530 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0003520 AT1G68140.4 0 0 zinc finger/BTB domain protein, putative (DUF1644);(source:Araport11) Ipc13G0003510 AT1G68150.1 WRKY DNA-binding protein 9 member of WRKY Transcription Factor; Group II-b The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 9;(source:Araport11) Ipc13G0003500 AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc13G0003490 AT1G43170.9 ribosomal protein 1 Encodes a cytoplasmic ribosomal protein. The mRNA is cell-to-cell mobile. ribosomal protein 1;(source:Araport11) Ipc13G0003480 AT1G29030.1 Apoptosis inhibitory protein 5 (API5) 0 Apoptosis inhibitory protein 5 (API5);(source:Araport11) Ipc13G0003470 AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein 0 zinc finger (C2H2 type, AN1-like) family protein;(source:Araport11) Ipc13G0003460 AT1G25280.1 tubby like protein 10 Member of TLP family tubby like protein 10;(source:Araport11) Ipc13G0003450 AT1G66235.2 0 0 no-apical-meristem-associated carboxy-terminal domain protein;(source:Araport11) Ipc13G0003440 AT1G68170.2 0 nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc13G0003430 AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c). RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc13G0003420 AT3G26410.1 methyltransferases;nucleic acid binding Encodes a protein involved in modification of nucleosides in tRNA. Mutants have only 7.3% 2-methylguanosine levels of wild type counterparts. tRNA modification 11 protein;(source:Araport11) Ipc13G0003410 AT4G15010.3 Mitochondrial substrate carrier family protein 0 Mitochondrial substrate carrier family protein;(source:Araport11) Ipc13G0003400 AT5G64530.1 xylem NAC domain 1 0 xylem NAC domain 1;(source:Araport11) Ipc13G0003390 AT1G66810.3 0 Encodes a tandem CCCH zinc finger (TZF) protein that can bind DNA and RNA, function as a transcriptional activator, and is involved in secondary wall biosynthesis. Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11) Ipc13G0003380 AT5G64570.1 beta-D-xylosidase 4 Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4;(source:Araport11) Ipc13G0003370 AT4G33430.1 BRI1-associated receptor kinase Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase;(source:Araport11) Ipc13G0003360 AT1G80670.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc13G0003350 AT1G22040.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc13G0003340 AT1G22150.4 0 sulfate transporter Sultr1;3 sulfate transporter 1;(source:Araport11) Ipc13G0003330 AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc13G0003320 AT4G33500.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0003310 AT4G33500.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0003300 AT5G10160.1 Thioesterase superfamily protein 0 Thioesterase superfamily protein;(source:Araport11) Ipc13G0003290 AT5G64090.1 0 0 hyccin;(source:Araport11) Ipc13G0003280 AT2G26730.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0003270 AT5G64170.3 0 LNK1 is a member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex.Functions as a transcriptional coactivator. dentin sialophosphoprotein-like protein;(source:Araport11) Ipc13G0003260 AT4G09530.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0003250 AT1G78160.2 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 7;(source:Araport11) Ipc13G0003240 AT5G09400.1 K+ uptake permease 7 Encodes a potassium uptake permease with a functional adenylate cyclase (AC) center. The first 100 aa of this protein can complement AC-deficient E. coli and display AC activity in vitro. KUP7 is localized to the plasma membrane where it functions in potassium uptake and translocation. K+ uptake permease 7;(source:Araport11) Ipc13G0003230 AT5G64220.2 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains CAMTA2 proteins bind to the AtALMT1 promoter at in vitro. The gene itself is Al inducible, and AtALMT1 expression is partially repressed in camta2 mutant. The mRNA is cell-to-cell mobile. Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain;(source:Araport11) Ipc13G0003220 #N/A #N/A #N/A #N/A Ipc13G0003210 AT1G34750.3 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0003200 AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-V;(source:Araport11) Ipc13G0003190 AT5G64230.1 0 0 1,8-cineole synthase;(source:Araport11) Ipc13G0003180 AT5G64240.2 metacaspase 3 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 3;(source:Araport11) Ipc13G0003170 AT1G02170.1 metacaspase 1 Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240). metacaspase 1;(source:Araport11) Ipc13G0003160 AT1G22310.2 methyl-CPG-binding domain 8 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 8;(source:Araport11) Ipc13G0003150 AT2G22360.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc13G0003140 AT1G22380.1 UDP-glucosyl transferase 85A3 Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus. UDP-glucosyl transferase 85A3;(source:Araport11) Ipc13G0003130 AT1G22360.1 UDP-glucosyl transferase 85A2 0 UDP-glucosyl transferase 85A2;(source:Araport11) Ipc13G0003120 AT4G33510.1 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis The mRNA is cell-to-cell mobile. 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase;(source:Araport11) Ipc13G0003110 AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc13G0003100 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc13G0003090 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc13G0003080 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc13G0003070 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc13G0003060 AT1G60600.2 UbiA prenyltransferase family protein Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport. UbiA prenyltransferase family protein;(source:Araport11) Ipc13G0003050 AT5G65290.1 LMBR1-like membrane protein 0 LMBR1-like membrane protein;(source:Araport11) Ipc13G0003040 AT2G14050.1 minichromosome maintenance 9 0 minichromosome maintenance 9;(source:Araport11) Ipc13G0003030 AT5G64290.1 dicarboxylate transport 2.1 0 dicarboxylate transport 2.1;(source:Araport11) Ipc13G0003020 AT5G64300.1 GTP cyclohydrolase II encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively The mRNA is cell-to-cell mobile. GTP cyclohydrolase II;(source:Araport11) Ipc13G0003010 AT3G26040.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc13G0003000 AT5G23970.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc13G0002990 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0002980 AT3G56800.1 calmodulin 3 encodes a calmodulin calmodulin 3;(source:Araport11) Ipc13G0002970 AT5G09450.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0002960 AT5G64330.1 Phototropic-responsive NPH3 family protein Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc13G0002950 AT5G64340.1 sequence-specific DNA binding transcription factors;transcription regulators Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation. transcription factor SAC51;(source:Araport11) Ipc13G0002940 AT1G22800.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc13G0002930 AT1G58120.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0002920 AT5G09530.1 hydroxyproline-rich glycoprotein family protein The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0002910 AT5G09530.1 hydroxyproline-rich glycoprotein family protein The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0002900 AT4G02140.2 0 0 hypothetical protein;(source:Araport11) Ipc13G0002890 #N/A #N/A #N/A #N/A Ipc13G0002880 AT3G55840.1 Hs1pro-1 protein 0 Hs1pro-1 protein;(source:Araport11) Ipc13G0002870 AT5G09530.1 hydroxyproline-rich glycoprotein family protein The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development. hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0002860 AT5G64360.7 0 EIP9 interacts with EMF1 to regulate flowering. It functions partially redundantly with SDJ2 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc13G0002850 AT1G09730.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Along with SPF2, its activity is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc13G0002840 AT4G38062.1 0 0 basic helix loop helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0002830 AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc13G0002820 AT4G33630.3 0 Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death. UvrB/UvrC domain protein (DUF3506);(source:Araport11) Ipc13G0002810 AT3G21175.2 ZIM-like 1 member of a novel family of plant-specific GATA-type transcription factors. ZIM-like 1;(source:Araport11) Ipc13G0002800 AT4G33650.2 dynamin-related protein 3A Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A;(source:Araport11) Ipc13G0002790 AT2G04540.1 Beta-ketoacyl synthase Encodes a mitochondrial beta-ketoacyl-ACP synthase. Beta-ketoacyl synthase;(source:Araport11) Ipc13G0002780 AT5G09570.1 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc13G0002770 AT2G23970.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc13G0002760 AT2G14170.1 aldehyde dehydrogenase 6B2 Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase aldehyde dehydrogenase 6B2;(source:Araport11) Ipc13G0002750 AT1G18265.1 Protein of unknown function, DUF593 0 zein-binding protein (Protein of unknown function, DUF593);(source:Araport11) Ipc13G0002740 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc13G0002730 AT4G37940.1 AGAMOUS-like 21 encodes a MADS box protein, highly expressed in the root. AGAMOUS-like 21;(source:Araport11) Ipc13G0002720 AT5G09580.1 0 0 heat shock protein;(source:Araport11) Ipc13G0002710 AT2G04305.1 Magnesium transporter CorA-like family protein 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc13G0002700 AT5G10550.1 global transcription factor group E2 This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation. global transcription factor group E2;(source:Araport11) Ipc13G0002690 AT5G64430.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc13G0002680 AT5G64440.1 fatty acid amide hydrolase AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile. fatty acid amide hydrolase;(source:Araport11) Ipc13G0002670 AT5G64460.8 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc13G0002660 AT5G64480.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0002650 AT5G43860.1 chlorophyllase 2 Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation. chlorophyllase 2;(source:Araport11) Ipc13G0002640 AT1G58290.1 Glutamyl-tRNA reductase family protein Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis. Glutamyl-tRNA reductase family protein;(source:Araport11) Ipc13G0002630 AT4G21860.4 0 0 methionine sulfoxide reductase B 2;(source:Araport11) Ipc13G0002620 AT5G17010.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0002610 AT1G19190.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0002600 AT2G22730.3 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0002590 AT1G09970.1 Leucine-rich receptor-like protein kinase family protein RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc13G0002580 AT2G14260.1 proline iminopeptidase encodes proline iminopeptidase proline iminopeptidase;(source:Araport11) Ipc13G0002570 AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11) Ipc13G0002560 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0002550 AT5G65810.1 0 Encodes CGR3 (cotton Golgi-related 3). CGR3 and a close homologue CGR2 have overlapping roles in pectin methylesterification and plant growth. transmembrane protein;(source:Araport11) Ipc13G0002540 AT2G14620.1 xyloglucan endotransglucosylase/hydrolase 10 0 xyloglucan endotransglucosylase/hydrolase 10;(source:Araport11) Ipc13G0002530 AT2G14620.1 xyloglucan endotransglucosylase/hydrolase 10 0 xyloglucan endotransglucosylase/hydrolase 10;(source:Araport11) Ipc13G0002520 AT2G22795.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0002510 AT1G10020.1 Protein of unknown function (DUF1005) 0 formin-like protein (DUF1005);(source:Araport11) Ipc13G0002500 AT2G24840.1 AGAMOUS-like 61 Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. AGAMOUS-like 61;(source:Araport11) Ipc13G0002490 AT1G58360.1 amino acid permease 1 Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos. The transporter also functions in acquisition of glutamate and neutral amino acids by the root. amino acid permease 1;(source:Araport11) Ipc13G0002480 AT1G44910.1 pre-mRNA-processing protein 40A Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries. pre-mRNA-processing protein 40A;(source:Araport11) Ipc13G0002470 AT2G14660.1 0 0 thymocyte nuclear-like protein;(source:Araport11) Ipc13G0002460 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc13G0002450 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc13G0002440 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc13G0002430 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc13G0002420 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc13G0002410 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc13G0002400 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc13G0002390 AT2G33060.1 receptor like protein 27 0 receptor like protein 27;(source:Araport11) Ipc13G0002380 AT4G33800.2 0 0 hypothetical protein;(source:Araport11) Ipc13G0002370 AT1G70210.1 CYCLIN D1;1 Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination. CYCLIN D1;(source:Araport11) Ipc13G0002360 AT5G35530.1 Ribosomal protein S3 family protein 0 Ribosomal protein S3 family protein;(source:Araport11) Ipc13G0002350 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc13G0002340 AT3G54040.1 PAR1 protein 0 PAR1 protein;(source:Araport11) Ipc13G0002330 AT2G32190.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc13G0002320 AT1G49950.3 telomere repeat binding factor 1 Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.Mutations in TRB1 and TRB3 enhance the lhp1 mutant phenotype. Triple mutants are more strongly affected than the respective double mutants with lhp1. TRB1 binds non-H3K27me3 target genes predominantly at the transcription start sites and its presence increases the expression of several of these targets, enriched for functions of primary metabolism. At H3K27me3 target genes, TRB1 binding is more distributed across gene bodies and at extended promoter regions, corresponding to an enrichment of putative binding sites "RMCCTAR". At these genes, TRB1 particiaptes in the repression because several direct targets are further upregulated in trb1 lhp1 double mutants as compared to lhp1 mutants. telomere repeat binding factor 1;(source:Araport11) Ipc13G0002310 AT2G14680.3 myosin heavy chain-related 0 myosin heavy chain-like protein;(source:Araport11) Ipc13G0002300 AT1G49980.8 0 0 DNA/RNA polymerases superfamily protein;(source:Araport11) Ipc13G0002290 #N/A #N/A #N/A #N/A Ipc13G0002280 AT3G19630.1 Radical SAM superfamily protein 0 Radical SAM superfamily protein;(source:Araport11) Ipc13G0002270 AT3G19615.1 0 0 beta-1,4-xylosidase;(source:Araport11) Ipc13G0002260 AT2G05210.3 Nucleic acid-binding, OB-fold-like protein Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b. Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc13G0002250 AT3G19615.1 0 0 beta-1,4-xylosidase;(source:Araport11) Ipc13G0002240 AT3G19615.1 0 0 beta-1,4-xylosidase;(source:Araport11) Ipc13G0002230 AT2G14740.2 vaculolar sorting receptor 3 Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds. The mRNA is cell-to-cell mobile. vaculolar sorting receptor 3;(source:Araport11) Ipc13G0002220 AT2G14835.2 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0002210 AT1G27730.1 salt tolerance zinc finger Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. salt tolerance zinc finger;(source:Araport11) Ipc13G0002200 AT3G49940.1 LOB domain-containing protein 38 0 LOB domain-containing protein 38;(source:Araport11) Ipc13G0002190 AT1G49890.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc13G0002180 AT2G14825.1 0 0 histone deacetylase-like protein;(source:Araport11) Ipc13G0002170 AT1G49870.1 0 0 myosin-2 heavy chain-like protein;(source:Araport11) Ipc13G0002160 AT3G19550.1 0 0 glutamate racemase;(source:Araport11) Ipc13G0002150 AT1G49850.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0002140 AT4G33920.1 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0002130 AT4G33925.1 0 Encodes SSN2 (suppressor of sni1 2), a suppressor of SNI1 (AT4G18470). SSN2 contains a SWIM (SWI2/SNF2 and MuDR) domain found in a variety of prokaryotic and eukaryotic proteins. Involved in plant immune response and homologous recombination. zinc finger SWIM domain protein;(source:Araport11) Ipc13G0002120 AT4G24220.1 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc13G0002110 AT2G14880.1 SWIB/MDM2 domain superfamily protein 0 SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc13G0002100 AT3G19540.1 Protein of unknown function (DUF620) 0 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11) Ipc13G0002090 AT4G34280.1 transducin family protein / WD-40 repeat family protein Encodes a putative substrate receptor for the cullin4-RING ubiquitin E3 ligase complex that is involved in negative regulation of plant UV-B response. transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc13G0002080 AT5G56510.6 0 Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. pumilio 12;(source:Araport11) Ipc13G0002070 AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0002060 AT1G77240.1 AMP-dependent synthetase and ligase family protein 0 AMP-dependent synthetase and ligase family protein;(source:Araport11) Ipc13G0002050 AT2G14960.1 Auxin-responsive GH3 family protein encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin. Auxin-responsive GH3 family protein;(source:Araport11) Ipc13G0002040 AT3G19510.2 0 Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains. Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc13G0002030 AT1G47230.1 CYCLIN A3;4 0 CYCLIN A3;(source:Araport11) Ipc13G0002020 AT4G34260.1 1,2-alpha-L-fucosidases 0 1,2-alpha-L-fucosidase;(source:Araport11) Ipc13G0002010 AT2G15020.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0002000 AT3G19508.1 0 0 complex 1 protein, LYR family protein;(source:Araport11) Ipc13G0001990 AT4G15480.1 UDP-Glycosyltransferase superfamily protein Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0001980 AT4G15480.1 UDP-Glycosyltransferase superfamily protein Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0001960 AT4G15480.1 UDP-Glycosyltransferase superfamily protein Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc13G0001970 ATMG00830.1 cytochrome C biogenesis 382 cytochrome c biogenesis orf382 cytochrome C biogenesis 382;(source:Araport11) Ipc13G0001950 AT2G15270.2 0 0 PRKR-interacting protein;(source:Araport11) Ipc13G0001940 AT2G15290.1 translocon at inner membrane of chloroplasts 21 Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma. translocon at inner membrane of chloroplasts 21;(source:Araport11) Ipc13G0001930 AT4G37250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0001920 AT3G19490.1 sodium:hydrogen antiporter 1 member of Na+/H+ antiporter-Putative family sodium:hydrogen antiporter 1;(source:Araport11) Ipc13G0001910 AT4G34190.1 stress enhanced protein 1 Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding. stress enhanced protein 1;(source:Araport11) Ipc13G0001900 AT2G15320.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0001890 AT4G35220.1 Cyclase family protein 0 Cyclase family protein;(source:Araport11) Ipc13G0001880 AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related 0 late embryogenesis abundant protein-related / LEA protein-like protein;(source:Araport11) Ipc13G0001870 AT4G34150.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc13G0001860 AT3G19420.1 PTEN 2 Encodes a phosphatase with low in vitro tyrosine phosphatase activity that is capable of dephosphorylating in vitro the 3'phosphate group of PI3P, PI(3,4)P2, and PI(3,5)P2 and may be an effector of lipid signaling. The mRNA is cell-to-cell mobile. PTEN 2;(source:Araport11) Ipc13G0001850 AT5G67210.1 Protein of unknown function (DUF579) Encode a DUF579 (domain of unknown function 579) containing protein essential for normal xylan synthesis and deposition in the secondary cell wall. IRREGULAR XYLEM protein (DUF579);(source:Araport11) Ipc13G0001830 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0001840 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0001820 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0001810 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0001800 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc13G0001790 AT4G36910.1 Cystathionine beta-synthase (CBS) family protein Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system. Cystathionine beta-synthase (CBS) family protein;(source:Araport11) Ipc13G0001780 AT4G34100.2 RING/U-box superfamily protein Encodes a protein involved in cuticular wax biosynthesis. Lines carrying a recessive mutation in this locus have reduced chain-length distribution, weakly glaucous stem surface, and has reduced fertility in early flowers, non-spreading floret, downward cupped leaves, leaf waxes nearly pure C24 and C26 acid. RING/U-box superfamily protein;(source:Araport11) Ipc13G0001770 AT2G23360.1 Plant protein of unknown function (DUF869) 0 filament-like protein (DUF869);(source:Araport11) Ipc13G0001760 AT5G53390.1 O-acyltransferase (WSD1-like) family protein Encodes a member of the bifunctional wax ester synthase/diacylglycerol acyltransferase gene family, WSD11, which is expressed in elongating petals and localized to the plasma membrane. O-acyltransferase (WSD1-like) family protein;(source:Araport11) Ipc13G0001750 AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc13G0001740 AT2G15530.7 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc13G0001730 AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to desiccation due to the abnormal cuticle. Together with ICE1, ZOU determines primary seed dormancy depth independently of their joint role in endosperm development. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0001720 AT1G49780.1 plant U-box 26 PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation. plant U-box 26;(source:Araport11) Ipc13G0001710 AT2G15570.1 Thioredoxin superfamily protein chloroplast protein similar to prokaryotic thioredoxin. Thioredoxin superfamily protein;(source:Araport11) Ipc13G0001700 AT3G19290.5 0 bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediates ABA-dependent stress responses.ABF4 acts through SnRK2 pathway and binds to ABA response elements of the promoters of NYE1 and regulates their expression to promote chlorophyll degradation. ABRE binding factor 4;(source:Araport11) Ipc13G0001690 AT1G49710.1 fucosyltransferase 12 Encodes a protein with core α1,3-fucosyltransferase activity. fucosyltransferase 12;(source:Araport11) Ipc13G0001680 AT2G15620.1 nitrite reductase 1 Involved in the second step of nitrate assimilation. Its expression is induced by nitrate. The mRNA is cell-to-cell mobile. nitrite reductase 1;(source:Araport11) Ipc13G0001670 AT3G19260.1 LAG1 homologue 2 LAG1 homolog. Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. It encodes a ceramide synthase essential for production of LCFA-ceramides (mainly C16). LAG1 homologue 2;(source:Araport11) Ipc13G0001660 AT4G34410.1 redox responsive transcription factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Regulates programmed cell death (PCD) inhibitor genes. Involved in retarding programmed cell death under salt stress due to the regulation of processes participating in ROS inhibition. ERF-regulated transcripts belong to the tryptophan biosynthesis, tryptophan metabolism, and downstream plant hormone signal transduction pathways, where ERF109 potentially acts as a ?master switch? mediator of a cascade of consecutive events across the three pathways, promoting plant growth and re-adjustment to homeostasis due the direct participation in auxin biosynthesis leading to the plant?s ability to tolerate salt stress. redox responsive transcription factor 1;(source:Araport11) Ipc13G0001650 AT3G19240.1 Vacuolar import/degradation, Vid27-related protein 0 Vacuolar import/degradation, Vid27-related protein;(source:Araport11) Ipc13G0001640 AT2G15680.1 Calcium-binding EF-hand family protein Encodes a calmodulin-like protein. Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0001630 AT4G34419.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0001620 AT1G49670.1 ARP protein (REF) molecular function has not been defined. Was shown involved in oxidative stress tolerance. ARP protein (REF);(source:Araport11) Ipc13G0001610 AT3G19184.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0001600 AT1G49620.3 0 Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. Cyclin-dependent kinase inhibitor family protein;(source:Araport11) Ipc13G0001590 AT3G19170.1 presequence protease 1 Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers presequence protease 1;(source:Araport11) Ipc13G0001580 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0001570 AT1G19190.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc13G0001560 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc13G0001550 AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc13G0001540 AT2G15760.1 Protein of unknown function (DUF1645) 0 calmodulin-binding protein (DUF1645);(source:Araport11) Ipc13G0001530 AT3G19120.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) Ipc13G0001520 AT3G50530.1 CDPK-related kinase CDPK-related kinase CDPK-related kinase;(source:Araport11) Ipc13G0001510 AT4G33945.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc13G0001500 AT5G57260.1 cytochrome P450, family 71, subfamily B, polypeptide 10 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 10;(source:Araport11) Ipc13G0001490 AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase;(source:Araport11) Ipc13G0001480 AT2G03500.1 Homeodomain-like superfamily protein Encodes a nuclear localized member of the MYB family of transcriptional regulators that is involved in negative regulation of flowering. It is expressed in vascular tissues and at low levels in the shoot apex during the transition to flowering. Loss of function mutations are early flowering.EFM is involved in the autonomous, thermosensory and GA pathways and expression is directly regulated by SVP. EFM interacts with JMJD5 to repress FT expression. Homeodomain-like superfamily protein;(source:Araport11) Ipc13G0001470 AT1G49520.1 SWIB complex BAF60b domain-containing protein 0 SWIB complex BAF60b domain-containing protein;(source:Araport11) Ipc13G0001460 AT2G15820.1 endonucleases Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage. endonuclease;(source:Araport11) Ipc13G0001450 AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0001440 AT1G49510.3 0 0 embryo defective 1273;(source:Araport11) Ipc13G0001430 AT3G19050.1 phragmoplast orienting kinesin 2 PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2;(source:Araport11) Ipc13G0001420 AT3G19000.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc13G0001410 AT2G15860.1 0 0 BAT2 domain protein;(source:Araport11) Ipc13G0001400 AT3G19020.2 0 Pollen expressed protein required for pollen tube growth. Along with other members of the LRX family, interacts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc13G0001390 AT3G44150.1 0 0 Expp1 protein;(source:Araport11) Ipc13G0001380 AT3G18990.1 AP2/B3-like transcriptional factor family protein Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc13G0001370 AT2G26500.2 cytochrome b6f complex subunit (petM), putative 0 cytochrome b6f complex subunit (petM);(source:Araport11) Ipc13G0001360 AT2G15630.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc13G0001350 AT1G50030.2 target of rapamycin Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems. target of rapamycin;(source:Araport11) Ipc13G0001340 AT3G50810.3 0 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc13G0001330 AT2G16070.2 plastid division2 An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. plastid division2;(source:Araport11) Ipc13G0001320 AT5G66600.7 0 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc13G0001310 AT5G06920.1 FASCICLIN-like arabinogalactan protein 21 precursor 0 FASCICLIN-like arabinogalactan protein 21 precursor;(source:Araport11) Ipc13G0001300 AT4G34350.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling. 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;(source:Araport11) Ipc13G0001290 AT1G47530.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc13G0001280 AT1G49380.1 cytochrome c biogenesis protein family 0 cytochrome c biogenesis protein family;(source:Araport11) Ipc13G0001270 AT2G07655.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0001260 AT3G18850.4 lysophosphatidyl acyltransferase 5 0 lysophosphatidyl acyltransferase 5;(source:Araport11) Ipc13G0001250 AT4G34320.2 0 0 transmembrane protein, putative (DUF677);(source:Araport11) Ipc13G0001240 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc13G0001230 AT5G19040.3 0 Encodes cytokinin synthase. isopentenyltransferase 5;(source:Araport11) Ipc13G0001220 AT3G18840.3 0 0 LOW protein: PPR containing-like protein;(source:Araport11) Ipc13G0001210 AT1G11990.1 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc13G0001200 AT1G49330.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc13G0001190 AT1G49320.1 unknown seed protein like 1 Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function. unknown seed protein like 1;(source:Araport11) Ipc13G0001180 AT5G41610.2 cation/H+ exchanger 18 member of Putative Na+/H+ antiporter family cation/H+ exchanger 18;(source:Araport11) Ipc13G0001170 AT2G34570.1 PIN domain-like family protein 0 PIN domain-like family protein;(source:Araport11) Ipc13G0001160 AT3G18820.1 RAB GTPase homolog G3F 0 RAB GTPase homolog G3F;(source:Araport11) Ipc13G0001150 AT4G34460.1 GTP binding protein beta 1 Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. It seems to be involved in the calcium-mediated response to extracellular ATP. GTP binding protein beta 1;(source:Araport11) Ipc13G0001140 AT4G34490.1 cyclase associated protein 1 CYCLASE ASSOCIATED PROTEIN cyclase associated protein 1;(source:Araport11) Ipc13G0001130 AT5G15220.2 0 0 Ribosomal protein L27 family protein;(source:Araport11) Ipc13G0001120 AT2G21710.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc13G0001110 AT3G50860.1 Clathrin adaptor complex small chain family protein 0 Clathrin adaptor complex small chain family protein;(source:Araport11) Ipc13G0001100 AT2G16250.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc13G0001090 AT4G39260.3 cold, circadian rhythm, and RNA binding 1 Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). cold, circadian rhythm, and RNA binding 1;(source:Araport11) Ipc13G0001080 AT4G39250.1 RAD-like 1 0 RAD-like 1;(source:Araport11) Ipc13G0001070 AT2G21620.1 Adenine nucleotide alpha hydrolases-like superfamily protein Encodes gene that is induced in response to desiccation; mRNA expression is seen 10 and 24 hrs after start of desiccation treatment. Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc13G0001060 AT4G34540.1 NmrA-like negative transcriptional regulator family protein Encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine. Plays a positive role in developmental and dark -induced leaf senescence. NmrA-like negative transcriptional regulator family protein;(source:Araport11) Ipc13G0001050 AT4G39210.2 0 Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc13G0001040 AT2G21580.1 Ribosomal protein S25 family protein 0 Ribosomal protein S25 family protein;(source:Araport11) Ipc13G0001030 AT5G66440.1 0 0 tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11) Ipc13G0001020 AT2G16370.3 0 Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function. thymidylate synthase 1;(source:Araport11) Ipc13G0001010 AT2G18180.2 0 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc13G0001000 AT2G21520.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc13G0000990 AT1G75390.1 basic leucine-zipper 44 0 basic leucine-zipper 44;(source:Araport11) Ipc13G0000980 AT4G39150.3 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc13G0000970 AT4G39130.1 Dehydrin family protein 0 Dehydrin family protein;(source:Araport11) Ipc13G0000960 AT4G39110.1 Malectin/receptor-like protein kinase family protein bups1 and bups1/2 double mutants have reduced feritlity due to premature rupture of pollen tubes before they reach the ovule. BUSP1 interacts with RALF4/19 peptide ligands and ANX1/2 receptors. BUPS/ANX signaling may regulate and promote pollen tube growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc13G0000950 AT2G21470.1 SUMO-activating enzyme 2 Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein. SUMO-activating enzyme 2;(source:Araport11) Ipc13G0000940 AT4G34610.4 0 0 BEL1-like homeodomain 6;(source:Araport11) Ipc13G0000930 AT2G16430.2 purple acid phosphatase 10 0 purple acid phosphatase 10;(source:Araport11) Ipc13G0000920 AT2G16430.2 purple acid phosphatase 10 0 purple acid phosphatase 10;(source:Araport11) Ipc13G0000910 AT5G66350.3 0 A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. Lateral root primordium (LRP) protein-like protein;(source:Araport11) Ipc13G0000900 AT1G75540.1 salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile. salt tolerance homolog2;(source:Araport11) Ipc13G0000890 AT4G39050.1 Kinesin motor family protein 0 Kinesin motor family protein;(source:Araport11) Ipc13G0000880 AT2G21370.1 xylulose kinase-1 Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose. xylulose kinase-1;(source:Araport11) Ipc13G0000870 AT2G21370.1 xylulose kinase-1 Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose. xylulose kinase-1;(source:Araport11) Ipc13G0000860 AT4G34660.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc13G0000850 AT5G66320.2 GATA transcription factor 5 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5;(source:Araport11) Ipc13G0000840 AT2G16460.1 Protein of unknown function (DUF1640) 0 coiled-coil 90B-like protein (DUF1640);(source:Araport11) Ipc13G0000830 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc13G0000820 AT4G39010.1 glycosyl hydrolase 9B18 Cellulase involved in cell wall modification during valve dehiscence. glycosyl hydrolase 9B18;(source:Araport11) Ipc13G0000800 AT4G38970.1 fructose-bisphosphate aldolase 2 Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. fructose-bisphosphate aldolase 2;(source:Araport11) Ipc13G0000810 AT5G11090.1 serine-rich protein-related 0 serine-rich protein-like protein;(source:Araport11) Ipc13G0000790 AT2G17170.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc13G0000780 AT2G21300.5 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc13G0000770 AT2G21270.5 0 0 ubiquitin fusion degradation 1;(source:Araport11) Ipc13G0000760 AT4G34710.2 arginine decarboxylase 2 Encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1. arginine decarboxylase 2;(source:Araport11) Ipc13G0000750 AT1G19910.1 ATPase, F0/V0 complex, subunit C protein vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc13G0000740 AT2G21240.2 basic pentacysteine 4 Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development. basic pentacysteine 4;(source:Araport11) Ipc13G0000730 AT4G38900.3 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0000720 AT4G34740.1 GLN phosphoribosyl pyrophosphate amidotransferase 2 Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage. Plays role in differential development of vascular-associated cells. Demonstrates a cell-specific difference in chloroplast development.Mutant leaves are highly reticulate with a green vascular pattern. GLN phosphoribosyl pyrophosphate amidotransferase 2;(source:Araport11) Ipc13G0000710 AT1G75590.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0000700 AT4G34760.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0000690 AT5G45600.1 YEATS family protein The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. It negatively regulates flowering by controlling the H4 acetylation levels in the FLC and FT chromatin. YEATS family protein;(source:Araport11) Ipc13G0000680 AT4G34770.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc13G0000670 AT4G38810.2 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc13G0000660 AT2G45960.1 plasma membrane intrinsic protein 1B a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1B;(source:Araport11) Ipc13G0000650 AT3G02210.1 COBRA-like protein 1 precursor 0 COBRA-like protein 1 precursor;(source:Araport11) Ipc13G0000640 AT2G21190.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc13G0000630 AT2G21180.1 0 0 transmembrane protein;(source:Araport11) Ipc13G0000620 AT3G19860.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc13G0000610 AT2G16595.1 Translocon-associated protein (TRAP), alpha subunit 0 Translocon-associated protein (TRAP), alpha subunit;(source:Araport11) Ipc13G0000600 AT2G21140.1 proline-rich protein 2 Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques. proline-rich protein 2;(source:Araport11) Ipc13G0000590 AT2G16600.1 rotamase CYP 3 Encodes cytosolic cyclophilin ROC3. The mRNA is cell-to-cell mobile. rotamase CYP 3;(source:Araport11) Ipc13G0000580 AT2G16600.1 rotamase CYP 3 Encodes cytosolic cyclophilin ROC3. The mRNA is cell-to-cell mobile. rotamase CYP 3;(source:Araport11) Ipc13G0000570 AT2G21120.1 Protein of unknown function (DUF803) Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis. magnesium transporter, putative (DUF803);(source:Araport11) Ipc13G0000560 AT4G38710.2 glycine-rich protein 0 glycine-rich protein;(source:Araport11) Ipc13G0000550 AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc13G0000540 AT4G34880.2 0 0 Amidase family protein;(source:Araport11) Ipc13G0000530 AT2G21100.2 0 0 Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11) Ipc13G0000520 AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc13G0000510 AT4G38690.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc13G0000500 AT2G21070.2 methyltransferases This gene is predicted to an encode a protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering. methyltransferase;(source:Araport11) Ipc13G0000490 AT4G38660.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc13G0000480 AT4G34950.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0000470 AT4G38650.1 Glycosyl hydrolase family 10 protein 0 Glycosyl hydrolase family 10 protein;(source:Araport11) Ipc13G0000460 AT4G38640.1 Plasma-membrane choline transporter family protein 0 Plasma-membrane choline transporter family protein;(source:Araport11) Ipc13G0000450 AT2G17840.1 Senescence/dehydration-associated protein-related Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis. Senescence/dehydration-associated protein-like protein;(source:Araport11) Ipc13G0000440 AT5G66140.1 proteasome alpha subunit D2 Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation. proteasome alpha subunit D2;(source:Araport11) Ipc13G0000430 AT4G38620.1 myb domain protein 4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile. myb domain protein 4;(source:Araport11) Ipc13G0000420 AT4G38600.3 0 encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. HECT ubiquitin protein ligase family protein KAK;(source:Araport11) Ipc13G0000410 AT2G16730.1 glycosyl hydrolase family 35 protein putative beta-galactosidase (BGAL13 gene) glycosyl hydrolase family 35 protein;(source:Araport11) Ipc13G0000400 AT4G35020.3 RAC-like 3 A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein. RAC-like 3;(source:Araport11) Ipc13G0000390 AT2G16770.2 0 Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc13G0000380 AT4G35070.2 SBP (S-ribonuclease binding protein) family protein 0 SBP (S-ribonuclease binding protein) family protein;(source:Araport11) Ipc13G0000370 AT5G47900.9 0 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc13G0000360 AT2G16850.1 plasma membrane intrinsic protein 2;8 0 plasma membrane intrinsic protein 2;(source:Araport11) Ipc13G0000350 AT3G17675.1 Cupredoxin superfamily protein Encodes a Plantacyanin/Basic blue family protein Cupredoxin superfamily protein;(source:Araport11) Ipc13G0000340 AT2G16920.2 0 0 ubiquitin-conjugating enzyme 23;(source:Araport11) Ipc13G0000330 AT2G20930.1 SNARE-like superfamily protein Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking. SNARE-like superfamily protein;(source:Araport11) Ipc13G0000320 AT1G20200.1 PAM domain (PCI/PINT associated module) protein 0 PAM domain (PCI/PINT associated module) protein;(source:Araport11) Ipc13G0000310 AT1G34360.1 translation initiation factor 3 (IF-3) family protein 0 translation initiation factor 3 (IF-3) family protein;(source:Araport11) Ipc13G0000300 AT4G38520.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc13G0000290 AT1G21740.1 Protein of unknown function (DUF630 and DUF632) 0 DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11) Ipc13G0000280 AT2G20920.1 Protein of unknown function (DUF3353) 0 chaperone (DUF3353);(source:Araport11) Ipc13G0000270 AT4G38500.1 Protein of unknown function (DUF616) 0 Sept9 (DUF616);(source:Araport11) Ipc13G0000260 AT2G16950.2 transportin 1 TRN1 is an importin beta protein that functions as a nuclear import receptor for AtGRP7 and in interacts with AGO1 to affect miRNA loading. transportin 1;(source:Araport11) Ipc13G0000250 AT5G42210.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc13G0000240 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc13G0000230 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc13G0000220 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc13G0000210 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc13G0000200 AT2G17030.1 F-box family protein with a domain of unknown function (DUF295) Encodes a SKP1/ASK-interacting protein. F-box SKIP23-like protein (DUF295);(source:Araport11) Ipc13G0000190 AT1G16210.1 0 0 coiled-coil protein;(source:Araport11) Ipc13G0000180 AT2G16750.2 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc13G0000170 AT2G41990.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc13G0000160 AT1G47670.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc13G0000150 AT3G45970.1 expansin-like A1 member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) The mRNA is cell-to-cell mobile. expansin-like A1;(source:Araport11) Ipc13G0000140 AT2G17040.1 NAC domain containing protein 36 Member of the NAC transcription factor family and more specifically, the ONAC022 subfamily. Involved in leaf and inflorescence stem morphogenesis. The mRNA is cell-to-cell mobile. NAC domain containing protein 36;(source:Araport11) Ipc13G0000130 AT2G17070.1 Arabidopsis protein of unknown function (DUF241) 0 hypothetical protein (DUF241);(source:Araport11) Ipc13G0000120 AT4G35240.4 0 0 DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632);(source:Araport11) Ipc13G0000110 #N/A #N/A #N/A #N/A Ipc13G0000100 AT2G17120.1 lysm domain GPI-anchored protein 2 precursor Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. It contains a C-terminal GPI anchor signal and is an ortholog of OsCEBiP. lysm domain GPI-anchored protein 2 precursor;(source:Araport11) Ipc13G0000090 AT4G38380.3 0 0 MATE efflux family protein;(source:Araport11) Ipc13G0000080 AT4G38370.1 Phosphoglycerate mutase family protein 0 Phosphoglycerate mutase family protein;(source:Araport11) Ipc13G0000070 AT4G35270.4 0 0 Plant regulator RWP-RK family protein;(source:Araport11) Ipc13G0000060 AT2G17210.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc13G0000050 AT2G17220.1 Protein kinase superfamily protein Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated. Protein kinase superfamily protein;(source:Araport11) Ipc13G0000040 AT4G38240.2 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis. alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase;(source:Araport11) Ipc13G0000030 AT2G17290.2 0 Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. The protein kinase CPK6 is shown in biochemical assays to be directly activated by elevations in calcium concentrations in the physiological range (Laanements et al., 2013 PlantPhys.; PMID: 23766366). These data correlate with the in vivo function of CPK6 in Ca2+ and ABA activation of S-type anion channels (Mori et al., 2006 PLoS Biol.; PMID: 17032064) and the ability of CPK6 to mediate ABA activation of SLAC1 (Brandt et al., 2012 PNAS; PMID: 22689970).The mRNA is cell-to-cell mobile. Calcium-dependent protein kinase family protein;(source:Araport11) Ipc13G0000020 AT4G35320.1 0 0 hypothetical protein;(source:Araport11) Ipc13G0000010 AT4G38200.1 SEC7-like guanine nucleotide exchange family protein Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. SEC7-like guanine nucleotide exchange family protein;(source:Araport11) Ipc06G0018390 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018380 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018370 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018360 AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein;(source:Araport11) Ipc06G0018350 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0018340 AT1G02130.1 RAS 5 Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5;(source:Araport11) Ipc06G0018330 AT3G07100.1 Sec23/Sec24 protein transport family protein Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology. Has epistatic interactions with AT1G55350, AT3G59420, and AT3G10525. Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc06G0018320 AT2G21150.1 XAP5 family protein Encodes a nuclear localized XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. XCT loss of function mutations also show decreased levels of DCL1, 3 and 4 and correspondingly lower levels of certain small RNAs suggesting a role in sRNA biogenesis. XAP5 family protein;(source:Araport11) Ipc06G0018310 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc06G0018300 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc06G0018290 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc06G0018280 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc06G0018270 AT2G27030.3 calmodulin 5 encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile. calmodulin 5;(source:Araport11) Ipc06G0018260 AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit protein Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism. As part of the regulatory subunit, it binds maltose which promotes kinase activity. 5-AMP-activated protein kinase beta-2 subunit protein;(source:Araport11) Ipc06G0018250 AT5G06390.1 FASCICLIN-like arabinogalactan protein 17 precursor 0 FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11) Ipc06G0018240 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018230 AT1G42430.2 0 Novel plant specific, chloroplast localized protein that is involved in regulation of starch degradation. inactive purple acid phosphatase-like protein;(source:Araport11) Ipc06G0018220 AT1G04300.4 TRAF-like superfamily protein Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes. TRAF-like superfamily protein;(source:Araport11) Ipc06G0018210 AT4G26500.1 chloroplast sulfur E Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis. chloroplast sulfur E;(source:Araport11) Ipc06G0018200 AT2G35140.6 0 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc06G0018190 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc06G0018180 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc06G0018170 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018160 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0017480 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018150 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc06G0018140 AT1G70180.6 0 0 Sterile alpha motif (SAM) domain-containing protein;(source:Araport11) Ipc06G0018130 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc01G0000010 AT3G22790.3 0 Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It binds filamentous actin and is localized to the plasma membrane and plasmodesmata. Kinase interacting (KIP1-like) family protein;(source:Araport11) Ipc01G0000020 AT1G75700.3 0 0 HVA22-like protein G;(source:Araport11) Ipc01G0000030 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc01G0000040 #N/A #N/A #N/A #N/A Ipc01G0000050 AT1G47940.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0000060 AT3G18860.2 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc01G0000070 AT3G22780.1 Tesmin/TSO1-like CXC domain-containing protein CHC protein involved in cell cycle progression (positive regulator). Tesmin/TSO1-like CXC domain-containing protein;(source:Araport11) Ipc01G0000080 AT3G22690.3 0 YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation. LOW protein: PPR containing-like protein;(source:Araport11) Ipc01G0000090 AT3G22690.2 0 YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation. LOW protein: PPR containing-like protein;(source:Araport11) Ipc01G0000100 AT3G49430.7 0 Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. SER/ARG-rich protein 34A;(source:Araport11) Ipc01G0000110 AT2G01770.1 vacuolar iron transporter 1 Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane. vacuolar iron transporter 1;(source:Araport11) Ipc01G0000120 AT3G22750.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0000130 AT3G61590.1 Galactose oxidase/kelch repeat superfamily protein F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box. Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc01G0000140 AT3G63250.3 0 Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. homocysteine methyltransferase 2;(source:Araport11) Ipc01G0000150 AT4G14790.2 0 encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA. ATP-dependent RNA helicase;(source:Araport11) Ipc01G0000160 AT3G07210.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0000170 ATCG00170.1 DNA-directed RNA polymerase family protein RNA polymerase beta' subunit-2 DNA-directed RNA polymerase family protein;(source:Araport11) Ipc01G0000180 AT5G39840.1 ATP-dependent RNA helicase, mitochondrial, putative 0 ATP-dependent RNA helicase;(source:Araport11) Ipc01G0000190 AT1G70780.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0000200 AT1G70820.1 phosphoglucomutase, putative / glucose phosphomutase, putative 0 phosphoglucomutase, putative / glucose phosphomutase;(source:Araport11) Ipc01G0000210 AT4G38180.1 FAR1-related sequence 5 0 FAR1-related sequence 5;(source:Araport11) Ipc01G0000220 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0000230 AT1G70830.5 MLP-like protein 28 0 MLP-like protein 28;(source:Araport11) Ipc01G0000240 AT1G70890.1 MLP-like protein 43 0 MLP-like protein 43;(source:Araport11) Ipc01G0000250 AT1G23110.7 0 0 fold protein;(source:Araport11) Ipc01G0000260 AT3G22690.2 0 YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation. LOW protein: PPR containing-like protein;(source:Araport11) Ipc01G0000270 AT1G69740.3 0 Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis. Aldolase superfamily protein;(source:Araport11) Ipc01G0000280 AT1G72560.7 0 Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development. ARM repeat superfamily protein;(source:Araport11) Ipc01G0000290 AT1G29900.1 carbamoyl phosphate synthetase B Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins. carbamoyl phosphate synthetase B;(source:Araport11) Ipc01G0000300 AT2G01490.2 0 Encodes a phytanoyl-CoA 2-hydroxylase (PAHX).The mRNA is cell-to-cell mobile. phytanoyl-CoA dioxygenase (PhyH) family protein;(source:Araport11) Ipc01G0000310 AT2G01480.1 O-fucosyltransferase family protein ESMD1 is a golgi localized putative O-fucosyltransferase. O-fucosyltransferase family protein;(source:Araport11) Ipc01G0000320 AT1G23100.1 GroES-like family protein 0 GroES-like family protein;(source:Araport11) Ipc01G0000330 AT4G08535.3 0 0 F-box SKIP17-like protein;(source:Araport11) Ipc01G0000340 AT1G23090.1 sulfate transporter 91 Encodes AST91 mRNA for sulfate transporter. sulfate transporter 91;(source:Araport11) Ipc01G0000350 AT2G01460.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc01G0000360 AT2G28850.1 cytochrome P450, family 710, subfamily A, polypeptide 3 member of CYP710A cytochrome P450, family 710, subfamily A, polypeptide 3;(source:Araport11) Ipc01G0000370 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc01G0000380 AT1G30110.2 nudix hydrolase homolog 25 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 25;(source:Araport11) Ipc01G0000390 #N/A #N/A #N/A #N/A Ipc01G0000400 AT4G01830.1 P-glycoprotein 5 0 P-glycoprotein 5;(source:Araport11) Ipc01G0000410 AT1G15000.1 serine carboxypeptidase-like 50 0 serine carboxypeptidase-like 50;(source:Araport11) Ipc01G0000420 AT1G21270.1 wall-associated kinase 2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2;(source:Araport11) Ipc01G0000430 AT2G01440.1 DEAD/DEAH box RNA helicase family protein 0 DEAD/DEAH box RNA helicase family protein;(source:Araport11) Ipc01G0000440 AT1G23050.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc01G0000450 AT5G22800.2 0 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. Alanyl-tRNA synthetase, class IIc;(source:Araport11) Ipc01G0000460 AT3G13560.5 0 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc01G0000470 AT5G45320.1 0 0 late embryogenesis abundant protein;(source:Araport11) Ipc01G0000480 AT1G71010.1 FORMS APLOID AND BINUCLEATE CELLS 1C Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. The mRNA is cell-to-cell mobile. FORMS APLOID AND BINUCLEATE CELLS 1C;(source:Araport11) Ipc01G0000490 AT2G01340.1 0 Encodes a protein whose expression is responsive to nematode infection. plastid movement impaired protein;(source:Araport11) Ipc01G0000500 AT1G71040.1 Cupredoxin superfamily protein Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability. Cupredoxin superfamily protein;(source:Araport11) Ipc01G0000510 AT1G71050.1 Heavy metal transport/detoxification superfamily protein 0 Heavy metal transport/detoxification superfamily protein;(source:Araport11) Ipc01G0000520 AT5G40940.1 putative fasciclin-like arabinogalactan protein 20 0 putative fasciclin-like arabinogalactan protein 20;(source:Araport11) Ipc01G0000530 AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0000540 AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc01G0000550 AT3G16260.1 tRNAse Z4 Encodes a tRNase Z. The mRNA is cell-to-cell mobile. tRNAse Z4;(source:Araport11) Ipc01G0000560 AT2G01290.1 ribose-5-phosphate isomerase 2 Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death. ribose-5-phosphate isomerase 2;(source:Araport11) Ipc01G0000570 AT3G22880.2 0 Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene. DNA repair (Rad51) family protein;(source:Araport11) Ipc01G0000580 AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein Encodes a mitochondrial protein essential for the splicing of group II introns in two mitochondrial genes for which splicing factors had not previously been identified: rpl2 and ccmFc. Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11) Ipc01G0000590 AT1G15940.1 Tudor/PWWP/MBT superfamily protein One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Tudor/PWWP/MBT superfamily protein;(source:Araport11) Ipc01G0000600 AT3G30739.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0000610 AT1G34070.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0000620 AT1G71110.1 0 0 transmembrane protein;(source:Araport11) Ipc01G0000630 AT2G01275.4 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc01G0000640 AT3G12110.1 actin-11 Encodes an actin that is expressed predominantly during reproductive development. actin-11;(source:Araport11) Ipc01G0000650 AT5G13240.1 transcription regulators Global repressor of RNA polymerase III (Pol III). Maf1 repressor activity is critical for plant survival during environmental stresses, and is regulated by its phosphorylation/dephosphorylation through the activity of TOR and PP4/PP2A phosphatases. transcription regulator;(source:Araport11) Ipc01G0000660 AT3G30340.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc01G0000670 AT1G03310.2 debranching enzyme 1 Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex. debranching enzyme 1;(source:Araport11) Ipc01G0000680 AT5G50220.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc01G0000690 AT3G03280.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0000700 AT1G35620.1 PDI-like 5-2 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants. The mRNA is cell-to-cell mobile. PDI-like 5-2;(source:Araport11) Ipc01G0000710 AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0000720 AT3G17450.2 0 0 hAT dimerization domain-containing protein;(source:Araport11) Ipc01G0000730 AT1G15130.1 Endosomal targeting BRO1-like domain-containing protein 0 Endosomal targeting BRO1-like domain-containing protein;(source:Araport11) Ipc01G0000740 AT5G08680.1 ATP synthase alpha/beta family protein Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile. ATP synthase alpha/beta family protein;(source:Araport11) Ipc01G0000750 AT5G38110.1 anti- silencing function 1b This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation. Its expression is regulated during cell cycle progression through E2F transcription factors. anti- silencing function 1b;(source:Araport11) Ipc01G0000760 AT1G61340.2 F-box family protein Encodes a F-box protein induced by various biotic or abiotic stress. F-box family protein;(source:Araport11) Ipc01G0000770 AT1G70250.1 receptor serine/threonine kinase, putative Encodes a Protease inhibitor/seed storage/LTP family protein receptor serine/threonine kinase;(source:Araport11) Ipc01G0000780 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0000790 AT1G14200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0000800 AT2G33720.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0000810 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc01G0000820 AT5G26680.5 0 Encodes a FEN1 homolog that has double-flap endonuclease activity, weak GEN activity towards bubble DNA structures and flap endonuclease activity towards substrates with a single-flap structure, but lacks the 5′ exonuclease activity towards DNA substrates with a nick on one strand, and GEN activity towards gapped DNA without any flap. It is expressed in rapidly dividing cells and mutants have smaller roots and hypocotyls. 5-3 exonuclease family protein;(source:Araport11) Ipc01G0000830 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0000840 AT1G14200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0000850 AT4G05120.2 0 Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine. Major facilitator superfamily protein;(source:Araport11) Ipc01G0000860 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0000870 AT1G27170.1 transmembrane receptors;ATP binding 0 transmembrane receptors / ATP binding protein;(source:Araport11) Ipc01G0000880 AT2G33720.1 AP2/B3-like transcriptional factor family protein 0 AP2/B3-like transcriptional factor family protein;(source:Araport11) Ipc01G0000890 AT1G15110.4 0 PSS1 encodes a base-exchange-type Phosphatidylserine (PS) synthase. Mutant analysis revealed its role in pollen maturation. phosphatidyl serine synthase family protein;(source:Araport11) Ipc01G0000900 AT1G14200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0000930 AT3G02400.2 0 Contains a single exon and encodes a ~66-kD protein with a Forkhead- Associated domain. Binds the promoter of PEX11b and expression is correlated with negative regulation of PEX11b. SMAD/FHA domain-containing protein;(source:Araport11) Ipc01G0000950 AT2G01140.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc01G0000910 AT1G14200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0000940 AT3G02400.2 0 Contains a single exon and encodes a ~66-kD protein with a Forkhead- Associated domain. Binds the promoter of PEX11b and expression is correlated with negative regulation of PEX11b. SMAD/FHA domain-containing protein;(source:Araport11) Ipc01G0000920 AT1G14200.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0000960 AT2G01140.1 Aldolase superfamily protein 0 Aldolase superfamily protein;(source:Araport11) Ipc01G0000970 AT1G22730.1 MA3 domain-containing protein 0 MA3 domain-containing protein;(source:Araport11) Ipc01G0000980 AT5G65550.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0000990 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0001000 AT1G13570.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0001010 AT2G47600.1 magnesium/proton exchanger Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family magnesium/proton exchanger;(source:Araport11) Ipc01G0001020 AT2G45550.1 cytochrome P450, family 76, subfamily C, polypeptide 4 member of CYP76C cytochrome P450, family 76, subfamily C, polypeptide 4;(source:Araport11) Ipc01G0001030 AT3G26330.1 cytochrome P450, family 71, subfamily B, polypeptide 37 putative cytochrome P450 cytochrome P450, family 71, subfamily B, polypeptide 37;(source:Araport11) Ipc01G0001040 AT1G43260.1 hAT transposon superfamily protein 0 hAT transposon superfamily protein;(source:Araport11) Ipc01G0001050 AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related 0 hAT dimerization domain-containing protein / transposase-like protein;(source:Araport11) Ipc01G0001060 AT5G42590.1 cytochrome P450, family 71, subfamily A, polypeptide 16 putative cytochrome P450 cytochrome P450, family 71, subfamily A, polypeptide 16;(source:Araport11) Ipc01G0001070 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc01G0001080 AT5G32470.1 Haem oxygenase-like, multi-helical The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity. heme oxygenase-like, multi-helical;(source:Araport11) Ipc01G0001090 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0001100 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0001110 AT3G14250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0001120 AT1G54050.2 0 0 HSP20-like chaperones superfamily protein;(source:Araport11) Ipc01G0001130 AT4G03470.1 Ankyrin repeat family protein 0 Ankyrin repeat family protein;(source:Araport11) Ipc01G0001140 AT1G54070.1 Dormancy/auxin associated family protein 0 Dormancy/auxin associated family protein;(source:Araport11) Ipc01G0001150 AT3G14172.1 0 0 GPI-anchored adhesin-like protein;(source:Araport11) Ipc01G0001160 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0001170 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc01G0001180 AT3G47800.1 Galactose mutarotase-like superfamily protein 0 Galactose mutarotase-like superfamily protein;(source:Araport11) Ipc01G0001190 AT1G73760.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc01G0001200 AT1G04625.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc01G0001210 AT1G49540.1 elongator protein 2 0 elongator protein 2;(source:Araport11) Ipc01G0001220 AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc01G0001230 AT1G15080.1 lipid phosphate phosphatase 2 Encodes phosphatidic acid phosphatase. Involved in ABA signaling. Functions as a negative regulator upstream of ABI4. Expressed during germination and seed development. Expressed overall in young seedlings, in roots, hypocotyls, and vascular cells of cotyledons and leaves of 10 day-old seedlings, in flower filaments and stem elongation zones. Not expressed in anthers, pollen nor petals. lipid phosphate phosphatase 2;(source:Araport11) Ipc01G0001240 AT2G01170.1 bidirectional amino acid transporter 1 Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys, GABA but not pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue. bidirectional amino acid transporter 1;(source:Araport11) Ipc01G0001250 AT2G01170.1 bidirectional amino acid transporter 1 Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys, GABA but not pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue. bidirectional amino acid transporter 1;(source:Araport11) Ipc01G0001260 AT1G68185.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc01G0001270 #N/A #N/A #N/A #N/A Ipc01G0001280 AT5G55010.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0001290 AT2G06105.1 0 0 aspartyl protease gag-polyprotein;(source:Araport11) Ipc01G0001300 AT3G11260.1 WUSCHEL related homeobox 5 WOX5 is a member of the Wuschel (WUS) family of homeodomain transcription factors and is required for quiescent center (QC) function and columella stem cell maintenance in the root meristem. It is expressed in the QC and moves to the columella stem cells where it represses their differentiation. WOX5 binds members of the Topless family of transcriptional co-repressors. WUSCHEL related homeobox 5;(source:Araport11) Ipc01G0001310 AT1G15100.1 RING-H2 finger A2A Encodes a putative RING-H2 finger protein RHA2a. RING-H2 finger A2A;(source:Araport11) Ipc01G0001320 AT3G55490.1 GINS complex protein 0 GINS complex protein;(source:Araport11) Ipc01G0001330 AT2G01210.1 Leucine-rich repeat protein kinase family protein ZAR1 encodes a plasma membrane localized leucine-rich repeat receptor-like kinase (LRR-RLK) that contains a putative CaM-binding domain and a Gβ-binding motif within its intracellular kinase region. Homozygous of function mutations are embryo-lethal and fail to properly make the first asymmetric division of the zygote. ZAR1 interacts with both CaM and Gβ in vivo and that interaction activates ZAR1 kinase activity. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc01G0001340 #N/A #N/A #N/A #N/A Ipc01G0001350 AT1G68230.2 Reticulon family protein 0 Reticulon family protein;(source:Araport11) Ipc01G0001360 AT1G68220.1 Protein of unknown function (DUF1218) 0 aerobic coproporphyrinogen-III oxidase (DUF1218);(source:Araport11) Ipc01G0001370 AT2G01260.1 Protein of unknown function (DUF789) 0 hypothetical protein (DUF789);(source:Araport11) Ipc01G0001380 AT4G17140.2 pleckstrin homology (PH) domain-containing protein 0 pleckstrin homology (PH) domain-containing protein;(source:Araport11) Ipc01G0001390 AT1G66910.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001400 AT3G31430.1 0 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc01G0001410 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001420 AT4G18250.1 receptor serine/threonine kinase, putative 0 receptor Serine/Threonine kinase-like protein;(source:Araport11) Ipc01G0001430 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001440 AT5G44950.1 F-box/RNI-like/FBD-like domains-containing protein 0 F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11) Ipc01G0001450 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001460 #N/A #N/A #N/A #N/A Ipc01G0001470 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0001480 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001490 AT1G25390.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc01G0001500 AT1G25380.2 0 Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro. NAD+ transporter 2;(source:Araport11) Ipc01G0001510 AT5G08430.1 SWIB/MDM2 domain;Plus-3;GYF 0 SWIB/MDM2 and Plus-3 and GYF domain-containing protein;(source:Araport11) Ipc01G0001520 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc01G0001530 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc01G0001540 AT2G31570.1 glutathione peroxidase 2 glutathione peroxidase GPx glutathione peroxidase 2;(source:Araport11) Ipc01G0001550 AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0001560 AT2G31560.3 0 0 signal transducer/transcription protein, putative (DUF1685);(source:Araport11) Ipc01G0001570 AT2G31920.1 Plant protein of unknown function (DUF936) Member of a novel, plant specific family of microtubule associated proteins. elongation factor 1-delta, putative (DUF936);(source:Araport11) Ipc01G0001580 #N/A #N/A #N/A #N/A Ipc01G0001590 AT4G02650.1 ENTH/ANTH/VHS superfamily protein Phosphatidylinositol binding clathrin assembly protein 5A/B are recent paralogs with overlapping functions in recycling ANXUR proteins to the pollen tube membrane. ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc01G0001600 AT2G19360.1 Protein of Unknown Function (DUF239) 0 tRNA-splicing ligase, putative (DUF239);(source:Araport11) Ipc01G0001610 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0001620 AT2G43330.1 inositol transporter 1 Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium. inositol transporter 1;(source:Araport11) Ipc01G0001630 AT1G03610.1 Protein of unknown function (DUF789) 0 plant/protein (DUF789);(source:Araport11) Ipc01G0001640 AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase 0 HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11) Ipc01G0001650 AT3G06980.1 DEA(D/H)-box RNA helicase family protein 0 DEA(D/H)-box RNA helicase family protein;(source:Araport11) Ipc01G0001660 AT2G31450.1 DNA glycosylase superfamily protein 0 DNA glycosylase superfamily protein;(source:Araport11) Ipc01G0001670 AT2G43210.3 0 0 Ubiquitin-like superfamily protein;(source:Araport11) Ipc01G0001680 AT1G05850.2 0 Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. Chitinase family protein;(source:Araport11) Ipc01G0001690 AT1G21310.1 extensin 3 Encodes extensin 3. extensin 3;(source:Araport11) Ipc01G0001700 AT2G43160.5 0 0 ENTH/VHS family protein;(source:Araport11) Ipc01G0001710 AT1G05785.5 0 0 Got1/Sft2-like vescicle transport protein family;(source:Araport11) Ipc01G0001720 AT1G05790.3 0 0 lipase class 3 family protein;(source:Araport11) Ipc01G0001730 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc01G0001740 AT1G05800.1 alpha/beta-Hydrolases superfamily protein Encodes a galactolipase. Located in the chloroplast. Involved in the initial step of jasmonic acid biosynthesis. Expressed in vegetative tissues and is necessary for the biosynthesis of basal-level JAs in vegetative tissues. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0001750 AT2G44020.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc01G0001760 AT5G16490.1 ROP-interactive CRIB motif-containing protein 4 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. ROP-interactive CRIB motif-containing protein 4;(source:Araport11) Ipc01G0001770 AT1G10830.1 15-cis-zeta-carotene isomerase Encodes a functional 15-cis-zeta-carotene isomerase (Z-ISO). 15-cis-zeta-carotene isomerase;(source:Araport11) Ipc01G0001780 AT5G15940.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc01G0001790 AT1G22130.1 AGAMOUS-like 104 Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL104 is expressed in pollen.It forms heterodimers with other MICK family members (AGL65 and AGL30). Involved in late stages of pollen development and pollen tube growth. AGAMOUS-like 104;(source:Araport11) Ipc01G0001800 AT5G56190.6 0 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc01G0001810 AT1G10840.1 translation initiation factor 3 subunit H1 Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1). translation initiation factor 3 subunit H1;(source:Araport11) Ipc01G0001820 AT3G28040.1 Leucine-rich receptor-like protein kinase family protein 0 Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc01G0001830 AT1G05830.4 0 Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1. trithorax-like protein 2;(source:Araport11) Ipc01G0001840 AT2G31660.1 ARM repeat superfamily protein SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes). Regulates microRNA activity. ARM repeat superfamily protein;(source:Araport11) Ipc01G0001850 AT5G12890.1 UDP-Glycosyltransferase superfamily protein 0 UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc01G0001860 AT4G18100.1 Ribosomal protein L32e 0 Ribosomal protein L32e;(source:Araport11) Ipc01G0001870 AT2G43080.1 P4H isoform 1 Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides. P4H isoform 1;(source:Araport11) Ipc01G0001880 AT1G34822.1 0 0 hypothetical protein;(source:Araport11) Ipc01G0001890 AT5G50780.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein MORC4 is a member of a family of GHKL ATPases. It is localized in the nuceloplasm and adjacent to chromocenters. Along with MORC7, it appears to repress the expression Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc01G0001900 AT4G36540.1 BR enhanced expression 2 Encodes the brassinosteroid signaling component BEE2 (BR-ENHANCED EXPRESSION 2). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BR enhanced expression 2;(source:Araport11) Ipc01G0001910 AT5G04720.1 ADR1-like 2 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. The mRNA is cell-to-cell mobile. ADR1-like 2;(source:Araport11) Ipc01G0001920 AT1G66980.1 suppressor of npr1-1 constitutive 4 Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. suppressor of npr1-1 constitutive 4;(source:Araport11) Ipc01G0001930 AT5G10910.1 mraW methylase family protein 0 mraW methylase family protein;(source:Araport11) Ipc01G0001940 AT5G26760.1 0 Encodes RPAP2 IYO Mate (RIMA), a homologue of yeast and human proteins linked to nuclear import of selective cargo. Knockdown of RIMA causes delayed onset of cell differentiation. RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein;(source:Araport11) Ipc01G0001950 AT5G60440.1 AGAMOUS-like 62 AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development. AGAMOUS-like 62;(source:Araport11) Ipc01G0001960 AT2G22720.4 0 0 SPT2 chromatin protein;(source:Araport11) Ipc01G0001970 AT1G70370.2 polygalacturonase 2 0 polygalacturonase 2;(source:Araport11) Ipc01G0001980 AT4G16260.1 Glycosyl hydrolase superfamily protein Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc01G0001990 AT4G16260.1 Glycosyl hydrolase superfamily protein Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc01G0002000 AT4G16260.1 Glycosyl hydrolase superfamily protein Encodes a putative beta-1,3-endoglucanase that interacts with the 30C02 cyst nematode effector. May play a role in host defense. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc01G0002010 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc01G0002020 AT2G43120.1 RmlC-like cupins superfamily protein Encodes a member of the functionally diverse cupin protein superfamily that is involved in susceptibility to the bacterial plant pathogen Ralstonia solanacearum. It stabilizes the papain-like cysteine protease XCP2. The mRNA is cell-to-cell mobile. RmlC-like cupins superfamily protein;(source:Araport11) Ipc01G0002030 AT2G31680.1 RAB GTPase homolog A5D 0 RAB GTPase homolog A5D;(source:Araport11) Ipc01G0002040 AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc01G0002050 AT1G05510.1 Protein of unknown function (DUF1264) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. naphthalene 1,2-dioxygenase subunit alpha (DUF1264);(source:Araport11) Ipc01G0002060 AT1G14780.1 MAC/Perforin domain-containing protein 0 MAC/Perforin domain-containing protein;(source:Araport11) Ipc01G0002070 AT5G19850.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc01G0002080 AT3G15130.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc01G0002090 AT5G26570.1 catalytics;carbohydrate kinases;phosphoglucan, water dikinases chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position. chloroplastidic phosphoglucan, water dikinase (ATGWD3);(source:Araport11) Ipc01G0002100 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc01G0002110 AT5G04720.1 ADR1-like 2 Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. The mRNA is cell-to-cell mobile. ADR1-like 2;(source:Araport11) Ipc01G0002120 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc01G0002130 AT1G63440.1 heavy metal atpase 5 The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed. heavy metal atpase 5;(source:Araport11) Ipc01G0002140 AT4G15560.1 Deoxyxylulose-5-phosphate synthase Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis Deoxyxylulose-5-phosphate synthase;(source:Araport11) Ipc01G0002150 AT1G66345.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein involved in splicing of nad4 intron which affects biogenesis of the respiratory complex I. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0002160 AT1G80920.1 Chaperone DnaJ-domain superfamily protein A nuclear encoded soluble protein found in the chloroplast stroma. Negatively regulated by light and has rapid turnover in darkness. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc01G0002170 AT1G66345.1 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide Repeat Protein involved in splicing of nad4 intron which affects biogenesis of the respiratory complex I. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc01G0002180 AT5G16710.1 dehydroascorbate reductase 1 DHAR3 protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.Encodes 30-40% of extractable leaf GSH-dependent DHAR activity. Single knockout mutants show unaltered ascorbate and glutathione status in optimal and oxidative stress conditions.Makes a minor contribution to glutathione oxidation in response to increased intracellular hydrogen peroxide (catalase deficiency) (PMID:28381499). dehydroascorbate reductase 1;(source:Araport11) Ipc01G0002190 AT1G60710.1 NAD(P)-linked oxidoreductase superfamily protein Encodes ATB2. NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002200 AT1G60710.1 NAD(P)-linked oxidoreductase superfamily protein Encodes ATB2. NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002210 AT1G60690.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002220 AT1G60680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002230 AT1G60730.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002240 AT1G60710.1 NAD(P)-linked oxidoreductase superfamily protein Encodes ATB2. NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002250 AT1G60710.1 NAD(P)-linked oxidoreductase superfamily protein Encodes ATB2. NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc01G0002260 AT3G25400.1 0 0 dCTP pyrophosphatase-like protein;(source:Araport11) Ipc01G0002270 AT3G23700.1 Nucleic acid-binding proteins superfamily Encodes a chloroplast-localized S1 domain-containing protein with RNA chaperone activity that affects the splicing and processing of chloroplast transcripts and plays a role in Arabidopsis seedling growth in the presence of ABA. Nucleic acid-binding proteins superfamily;(source:Araport11) Ipc01G0002280 AT1G71800.1 cleavage stimulating factor 64 RNA 3′-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex. cleavage stimulating factor 64;(source:Araport11) Ipc01G0002290 AT3G25290.2 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc01G0002300 AT2G32000.1 DNA topoisomerase, type IA, core 0 DNA topoisomerase, type IA, core;(source:Araport11) Ipc06G0001180 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc05G0023310 AT1G37113.1 0 0 hypothetical protein;(source:Araport11) Ipc05G0023320 AT2G28910.3 0 Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria). CAX interacting protein 4;(source:Araport11) Ipc08G0015190 AT3G53690.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0015200 AT4G18910.1 NOD26-like intrinsic protein 1;2 Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells. NOD26-like intrinsic protein 1;(source:Araport11) Ipc08G0015210 AT1G29800.1 RING/FYVE/PHD-type zinc finger family protein 0 RING/FYVE/PHD-type zinc finger family protein;(source:Araport11) Ipc08G0015220 AT1G78700.1 BES1/BZR1 homolog 4 0 BES1/BZR1 homolog 4;(source:Araport11) Ipc08G0015230 AT4G18880.1 heat shock transcription factor A4A Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses. heat shock transcription factor A4A;(source:Araport11) Ipc08G0015240 AT4G18840.3 0 0 Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11) Ipc08G0015250 AT4G18830.1 ovate family protein 5 Member of the ovate protein family.Interacts with BLH1 and KNAT3. Regulates the subcellular localization of BLH1. ovate family protein 5;(source:Araport11) Ipc08G0015260 AT1G17030.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0015270 AT1G17030.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0015280 AT4G18820.1 AAA-type ATPase family protein 0 AAA-type ATPase family protein;(source:Araport11) Ipc08G0015290 AT1G53400.1 Ubiquitin domain-containing protein 0 Ubiquitin domain-containing protein;(source:Araport11) Ipc08G0015300 AT2G34250.3 0 0 SecY protein transport family protein;(source:Araport11) Ipc08G0015310 AT4G18810.2 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0015320 AT4G15140.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0015330 AT1G29280.1 WRKY DNA-binding protein 65 member of WRKY Transcription Factor; Group II-e The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 65;(source:Araport11) Ipc08G0015340 AT1G29270.1 0 0 transcription factor bHLH35-like protein;(source:Araport11) Ipc08G0015350 AT2G42760.1 0 0 DUF1685 family protein;(source:Araport11) Ipc08G0015360 AT2G34200.2 0 0 RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11) Ipc08G0015370 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0015380 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015390 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015400 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0015410 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015420 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015430 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015440 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015450 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015460 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015470 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc08G0015480 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015490 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015500 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc08G0015510 AT5G20480.2 0 Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. EF-TU receptor;(source:Araport11) Ipc08G0015520 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015530 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0015540 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc08G0015550 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015560 #N/A #N/A #N/A #N/A Ipc08G0015570 AT4G18700.1 CBL-interacting protein kinase 12 Encodes CBL-interacting protein kinase 12 (CIPK12). CBL-interacting protein kinase 12;(source:Araport11) Ipc08G0015580 AT5G45820.1 CBL-interacting protein kinase 20 Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. CBL-interacting protein kinase 20;(source:Araport11) Ipc08G0015590 AT4G18640.1 Leucine-rich repeat protein kinase family protein Required for root hair elongation during tip growth. The mRNA is cell-to-cell mobile. Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0015600 AT1G29195.1 0 0 phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein;(source:Araport11) Ipc08G0015610 AT2G42610.2 Protein of unknown function (DUF640) 0 LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11) Ipc08G0015620 AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1 encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation 3-hydroxyacyl-CoA dehydratase 1;(source:Araport11) Ipc08G0015630 AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1 encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation 3-hydroxyacyl-CoA dehydratase 1;(source:Araport11) Ipc08G0015640 AT1G29160.1 Dof-type zinc finger DNA-binding family protein Encodes a DOF transcription factor involved in seed coat development. Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc08G0015650 AT4G18596.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc08G0015660 AT1G29120.2 Hydrolase-like protein family 0 Hydrolase-like protein family;(source:Araport11) Ipc08G0015670 AT5G46230.1 Protein of unknown function, DUF538 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc08G0015680 AT3G51280.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0015690 AT5G07110.1 prenylated RAB acceptor 1.B6 Encodes PRA1.B6, an isoform of the PRA1 (Prenylated Rab acceptors) family. PRAs bind to prenylated Rab proteins and possibly aids in targeting Rabs to their respective compartments. PRA1.B6 localizes to the Golgi apparatus and its ER-to-Golgi trafficking and localization to the Golgi apparatus are regulated by multiple sequence motifs in both the C- and N-terminal cytoplasmic domains. prenylated RAB acceptor 1.B6;(source:Araport11) Ipc08G0015700 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0015710 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0015720 AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0015730 AT2G27430.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc08G0015740 AT2G34080.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0015750 AT3G49340.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0015760 AT5G45890.1 senescence-associated gene 12 Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. senescence-associated gene 12;(source:Araport11) Ipc08G0015770 AT2G34080.1 Cysteine proteinases superfamily protein 0 Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0015780 AT1G29050.1 TRICHOME BIREFRINGENCE-LIKE 38 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 38;(source:Araport11) Ipc08G0015790 AT4G18550.2 0 DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0015800 AT4G18550.1 alpha/beta-Hydrolases superfamily protein DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0015810 AT4G18550.2 0 DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings. alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0015820 AT4G18540.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0015830 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0015840 AT1G28600.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0015850 AT1G28590.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0015860 AT2G45110.1 expansin B4 member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin B4;(source:Araport11) Ipc08G0015870 AT5G45920.4 0 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc08G0015880 AT1G28960.7 0 Encodes a ppGpp pyrophosphohydrolase. nudix hydrolase homolog 15;(source:Araport11) Ipc08G0015890 AT4G23660.5 0 Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50). polyprenyltransferase 1;(source:Araport11) Ipc08G0015900 AT2G33990.1 IQ-domain 9 0 IQ-domain 9;(source:Araport11) Ipc08G0015910 AT2G29120.1 glutamate receptor 2.7 member of Putative ligand-gated ion channel subunit family glutamate receptor 2.7;(source:Araport11) Ipc08G0015920 AT2G34060.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc08G0015930 AT5G45960.1 GDSL-like Lipase/Acylhydrolase superfamily protein GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. GDSL-like Lipase/Acylhydrolase superfamily protein;(source:Araport11) Ipc08G0015940 AT4G18450.1 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0015950 AT5G43670.1 Sec23/Sec24 protein transport family protein 0 Sec23/Sec24 protein transport family protein;(source:Araport11) Ipc08G0015960 AT5G45980.1 WUSCHEL related homeobox 8 Arabidopsis thaliana WOX8 protein. Contains similarity to homeodomain transcription factor. Positively regulates early embryonic growth. Together with CLE8 it forms a signaling module that promotes seed growth and overall seed size. WUSCHEL related homeobox 8;(source:Araport11) Ipc08G0015970 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc08G0015980 AT1G28540.1 0 Tail-anchored (TA) OEP membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids. transmembrane protein;(source:Araport11) Ipc08G0015990 AT5G46020.1 0 MUSE7 was identified in a forward genetic screen to identify snc1 enhancers using a mos4 snc1 background. muse7 mos4 snc1 plants are morphologiclly similar to snc1 plants with slightly twisted leaves. The triple mutant also shows PR gene activation and enhanced resistance to pathogens, like the snc1 single mutant. It is a single copy gene conserved in plants and metazoans.MUSE7 encodes an evolutionarily conserved putative kinase substrate of unknown function that affects the accumulation of NLR proteins. 28 kDa heat/acid-stable phosphoprotein-like protein;(source:Araport11) Ipc08G0016000 AT5G46030.3 0 0 transcription elongation factor-like protein;(source:Araport11) Ipc08G0016010 AT1G28520.5 0 VOZ transcription factor which acts as positive regulator of several salt-responsive genes. Functionally redundant in salt stress with VOZ2. vascular plant one zinc finger protein;(source:Araport11) Ipc08G0016020 AT5G65360.1 Histone superfamily protein 0 Histone superfamily protein;(source:Araport11) Ipc08G0016030 AT2G36110.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0016040 AT4G35160.1 O-methyltransferase family protein Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity. O-methyltransferase family protein;(source:Araport11) Ipc08G0016050 AT5G54160.1 O-methyltransferase 1 A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile. O-methyltransferase 1;(source:Araport11) Ipc08G0016060 AT2G02103.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc08G0016070 AT2G33860.1 Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. ETT is also a target of AP2; integrateing the functions of AGAMOUS and APETALA2 in floral meristem determinacy. Positive regulation of drought stress response genes. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein;(source:Araport11) Ipc08G0016080 AT5G53980.1 homeobox protein 52 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 52;(source:Araport11) Ipc08G0016090 AT5G46070.1 Guanylate-binding family protein 0 Guanylate-binding family protein;(source:Araport11) Ipc08G0016100 AT1G28440.1 HAESA-like 1 0 HAESA-like 1;(source:Araport11) Ipc08G0016110 AT4G18425.1 Protein of unknown function (DUF679) 0 transmembrane protein, putative (DUF679);(source:Araport11) Ipc08G0016120 AT5G46110.1 Glucose-6-phosphate/phosphate translocator-related Encodes a chloroplast triose phosphate / 3-phosphoglycerate translocator that transports triose phosphates derived from the Calvin cycle in the stroma to the cytosol for use in sucrose synthesis and other biosynthetic processes. A tpt mutant has altered acclimation responses. The mRNA is cell-to-cell mobile. Glucose-6-phosphate/phosphate translocator-like protein;(source:Araport11) Ipc08G0016130 AT2G20560.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc08G0016140 AT2G33850.1 0 Stigmatic factor that plays a role during the early post-pollination stages. E6-like protein;(source:Araport11) Ipc08G0016150 AT1G28395.3 0 0 hypothetical protein;(source:Araport11) Ipc08G0016160 AT3G05700.1 Drought-responsive family protein Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress. Drought-responsive family protein;(source:Araport11) Ipc08G0016170 AT5G61090.2 0 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0016180 AT3G15210.1 ethylene responsive element binding factor 4 Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation. The mRNA is cell-to-cell mobile. ethylene responsive element binding factor 4;(source:Araport11) Ipc08G0016190 AT1G28340.1 receptor like protein 4 0 receptor like protein 4;(source:Araport11) Ipc08G0016200 AT1G28330.1 dormancy-associated protein-like 1 dormancy-associated protein (DRM1) dormancy-associated protein-like 1;(source:Araport11) Ipc08G0016210 AT2G33820.1 Mitochondrial substrate carrier family protein encodes a mitochondrial ornithine transporter which exports ornithine from the mitochondrion to the cytosol Mitochondrial substrate carrier family protein;(source:Araport11) Ipc08G0016220 AT1G53160.3 0 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3 PrimeUTR. squamosa promoter binding protein-like 4;(source:Araport11) Ipc08G0016230 AT1G28310.2 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc08G0016240 AT4G20400.2 JUMONJI 14 Encodes a histone H3K4 demethylase repressing floral transition.Coordinates and structure features have been deposited in the RCSB Protein Data Bank with the accession codes 5YKN (JMJ14CD) and 5YKO(JMJ14CD-NOG-H3K4em3 complex). Glu285 and Glu516 contribute to the recognition of H3R2. Asp312 contributes to the recognition of H3Q5. Phe171 and Val363 contribute to the recognition of H3A7. Ser290, Trp296, and Tyr298 contribute to the recognition of H3K4me3 (PMID:29233856). JUMONJI 14;(source:Araport11) Ipc08G0016250 AT2G34700.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc08G0016260 AT4G20980.4 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11) Ipc08G0016270 AT5G58950.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0016280 AT3G54320.5 0 WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc08G0016290 AT3G47570.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc08G0016300 AT4G32480.1 Protein of unknown function (DUF506) 0 sugar phosphate exchanger, putative (DUF506);(source:Araport11) Ipc08G0016310 AT1G28240.1 Protein of unknown function (DUF616) 0 strawberry notch protein (DUF616);(source:Araport11) Ipc08G0016320 AT4G30930.1 Ribosomal protein L21 Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells). Ribosomal protein L21;(source:Araport11) Ipc08G0016330 AT2G33770.1 phosphate 2 Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response and mediates degradation of PHO1 and PHT1s at endomembrane. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. The mRNA is cell-to-cell mobile. phosphate 2;(source:Araport11) Ipc08G0016340 AT1G80770.3 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0016350 AT4G21700.1 Protein of unknown function (DUF2921) 0 DUF2921 family protein, putative (DUF2921);(source:Araport11) Ipc08G0016360 AT1G03700.1 Uncharacterised protein family (UPF0497) 0 Uncharacterized protein family (UPF0497);(source:Araport11) Ipc08G0016370 AT4G21610.1 lsd one like 2 Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains. lsd one like 2;(source:Araport11) Ipc08G0016380 AT1G02680.1 TBP-associated factor 13 Encodes a TBP-Associated Factor (TAF) that functions together with PRC2 in transcriptional regulation during seed development. TBP-associated factor 13;(source:Araport11) Ipc08G0016390 AT1G65070.2 DNA mismatch repair protein MutS, type 2 0 DNA mismatch repair protein MutS, type 2;(source:Araport11) Ipc08G0016400 AT4G27450.1 Aluminium induced protein with YGL and LRDR motifs 0 aluminum induced protein with YGL and LRDR motifs;(source:Araport11) Ipc08G0016410 AT4G04920.2 sensitive to freezing 6 Encodes a nuclear targeted protein that plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress. Required for expression of CBF-controlled cold-upregulated genes and some, but not all, other cold up-regulated genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes. SFR6 was isolated as a suppressor of cell wall defects in cob6 mutant background. sensitive to freezing 6;(source:Araport11) Ipc08G0016420 AT3G09010.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0016430 AT1G61040.3 0 Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family. Member of PAF-C complex. plus-3 domain-containing protein;(source:Araport11) Ipc08G0016440 AT1G28310.1 Dof-type zinc finger DNA-binding family protein 0 Dof-type zinc finger DNA-binding family protein;(source:Araport11) Ipc08G0016450 AT2G35630.1 ARM repeat superfamily protein Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity. The mRNA is cell-to-cell mobile. ARM repeat superfamily protein;(source:Araport11) Ipc08G0016460 AT1G13110.1 cytochrome P450, family 71 subfamily B, polypeptide 7 member of CYP71B The mRNA is cell-to-cell mobile. cytochrome P450, family 71 subfamily B, polypeptide 7;(source:Araport11) Ipc08G0016470 AT1G61080.4 0 0 Hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0016480 AT4G27430.2 COP1-interacting protein 7 Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression. The mRNA is cell-to-cell mobile. COP1-interacting protein 7;(source:Araport11) Ipc08G0016490 AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein 0 Toll-Interleukin-Resistance (TIR) domain family protein;(source:Araport11) Ipc08G0016500 AT1G61110.1 NAC domain containing protein 25 NAC transcription regulator. Regulates endosperm cell expansion during germination. NAC domain containing protein 25;(source:Araport11) Ipc08G0016510 AT5G25070.1 0 0 neurofilament light protein;(source:Araport11) Ipc08G0016520 AT3G52480.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0016530 AT5G57035.1 U-box domain-containing protein kinase family protein 0 U-box domain-containing protein kinase family protein;(source:Araport11) Ipc08G0016540 AT1G11080.1 serine carboxypeptidase-like 31 0 serine carboxypeptidase-like 31;(source:Araport11) Ipc08G0016550 AT1G11090.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0016560 AT1G61140.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related 0 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11) Ipc08G0016570 AT1G61150.9 0 0 LisH and RanBPM domains containing protein;(source:Araport11) Ipc08G0016580 AT1G16250.2 0 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc08G0016590 AT1G11125.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0016600 AT1G09060.4 0 JMJ24 is a nuclear localized JmjC domain containing protein. It has been shown to bind to transcribed regions AtSN1 and solo LTR and the promoter of SDC. JMJ24 appears to regulate basal levels of transcription of silenced loci in part by controlling methylation in heterochromatic regions. JmjC domain protein JMJ24;(source:Araport11) Ipc08G0016610 AT5G08390.1 Transducin/WD40 repeat-like superfamily protein One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0016620 AT1G61215.1 bromodomain 4 Bromodomain protein with a DNA binding motif bromodomain 4;(source:Araport11) Ipc08G0016640 AT1G61240.6 0 0 lysine ketoglutarate reductase trans-splicing-like protein (DUF707);(source:Araport11) Ipc08G0016630 AT4G32370.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc08G0016650 AT1G61250.1 secretory carrier 3 Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile. secretory carrier 3;(source:Araport11) Ipc08G0016660 AT5G54390.1 HAL2-like Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. The mRNA is cell-to-cell mobile. HAL2-like protein;(source:Araport11) Ipc08G0016670 AT2G28470.3 0 putative beta-galactosidase (BGAL8 gene) beta-galactosidase 8;(source:Araport11) Ipc08G0016680 AT1G11200.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc08G0016690 AT5G54280.2 myosin 2 Type VII myosin gene myosin 2;(source:Araport11) Ipc08G0016700 #N/A #N/A #N/A #N/A Ipc08G0016710 AT1G66070.2 Translation initiation factor eIF3 subunit 0 Translation initiation factor eIF3 subunit;(source:Araport11) Ipc08G0016720 AT5G57580.1 Calmodulin-binding protein 0 Calmodulin-binding protein;(source:Araport11) Ipc08G0016730 AT1G11240.1 0 0 ribosomal RNA-processing protein;(source:Araport11) Ipc08G0016740 AT1G61340.2 F-box family protein Encodes a F-box protein induced by various biotic or abiotic stress. F-box family protein;(source:Araport11) Ipc08G0016750 AT4G21500.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0016760 AT4G05020.1 NAD(P)H dehydrogenase B2 0 NAD(P)H dehydrogenase B2;(source:Araport11) Ipc08G0016770 AT1G32330.2 0 Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2. heat shock transcription factor A1D;(source:Araport11) Ipc08G0016780 AT1G61350.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc08G0016790 AT1G11260.1 sugar transporter 1 Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile. sugar transporter 1;(source:Araport11) Ipc08G0016800 AT2G04420.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0016810 AT4G03270.1 Cyclin D6;1 Cyclin D6, involved in cortex/endodermis asymmetric stem cell division. Cyclin D6;(source:Araport11) Ipc08G0016820 AT1G61620.1 phosphoinositide binding Encodes a RING-finger E3 ubiquitin ligase that plays a major role in maintaining COP1 homeostasis by targeting COP1 for ubiquitination and degradation in dark-grown seedlings. The mRNA is cell-to-cell mobile. phosphoinositide binding protein;(source:Araport11) Ipc08G0016830 AT1G11360.4 Adenine nucleotide alpha hydrolases-like superfamily protein 0 Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11) Ipc08G0016840 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc08G0016850 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc08G0016860 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc08G0016870 AT5G05340.1 Peroxidase superfamily protein Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes. Peroxidase superfamily protein;(source:Araport11) Ipc08G0016880 AT4G27280.1 Calcium-binding EF-hand family protein 0 Calcium-binding EF-hand family protein;(source:Araport11) Ipc08G0016890 AT1G16570.2 UDP-Glycosyltransferase superfamily protein Encodes a encodes a putative UDP-glycosyltransferase superfamily protein belonging to the glycosyltransferase (GT) family 33 that is localized to the endoplasmic reticulum. Loss of function alleles are male sterile, with pollen tubes bursting after germination. Loss of function also causes increased callose deposition in the female gametophyte, pollen tube overgrowth and reduced transmission. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc08G0016900 AT4G21390.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0016920 AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile. cysteine-rich RLK (RECEPTOR-like protein kinase) 10;(source:Araport11) Ipc08G0016910 AT4G21390.2 0 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0016930 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0016940 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0016950 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0016960 AT1G11410.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0016970 AT1G11410.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0016980 AT1G11340.1 S-locus lectin protein kinase family protein 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc08G0016990 AT1G11340.1 S-locus lectin protein kinase family protein 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc08G0017000 AT1G11410.1 S-locus lectin protein kinase family protein 0 S-locus lectin protein kinase family protein;(source:Araport11) Ipc08G0017010 AT1G11340.1 S-locus lectin protein kinase family protein 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc08G0017020 AT4G21380.1 receptor kinase 3 encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. receptor kinase 3;(source:Araport11) Ipc08G0017030 AT1G11340.1 S-locus lectin protein kinase family protein 0 G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11) Ipc08G0017040 AT1G11430.1 plastid developmental protein DAG, putative Encodes a protein involved in RNA editing in chloroplasts. The mRNA is cell-to-cell mobile. plastid developmental protein DAG;(source:Araport11) Ipc08G0017050 AT1G11440.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0017060 AT1G61667.2 0 0 serine protease, putative (Protein of unknown function, DUF538);(source:Araport11) Ipc08G0017070 AT1G61690.1 phosphoinositide binding 0 phosphoinositide binding protein;(source:Araport11) Ipc08G0017080 AT3G22104.1 Phototropic-responsive NPH3 family protein 0 Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0017090 AT5G54630.1 zinc finger protein-related 0 zinc finger protein-like protein;(source:Araport11) Ipc08G0017100 AT4G21280.1 photosystem II subunit QA Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II. photosystem II subunit QA;(source:Araport11) Ipc08G0017110 AT1G11530.1 C-terminal cysteine residue is changed to a serine 1 Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity. The mRNA is cell-to-cell mobile. C-terminal cysteine residue is changed to a serine 1;(source:Araport11) Ipc08G0017120 AT1G51070.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH115 is a basic helix loop helix protein of the IVc subgroup that plays a role in iron homeostasis. It interacts with related family members and targets PYE and other genes involved in response to Fe. basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0017130 AT1G61740.1 Sulfite exporter TauE/SafE family protein 0 Sulfite exporter TauE/SafE family protein;(source:Araport11) Ipc08G0017140 AT4G05220.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 0 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11) Ipc08G0017150 AT4G21215.2 0 0 transmembrane protein;(source:Araport11) Ipc08G0017160 AT4G21210.1 PPDK regulatory protein Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase). PPDK regulatory protein;(source:Araport11) Ipc08G0017170 AT4G21200.1 gibberellin 2-oxidase 8 Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins. gibberellin 2-oxidase 8;(source:Araport11) Ipc08G0017180 AT5G15170.1 tyrosyl-DNA phosphodiesterase-related Tyrosyl-DNA phosphodiesterase 1 involved in DNA repair. TDP1 is involved the repair of Topoisomerase 1 cleavage complexes (tdp1 mutants are camptotecin hypersensitive). tdp1/wss1A double mutants show a synergistic sensitivity after camptothecin treatment. tdp1/mus81 double mutants show an elevated number of dead cells in root meristems after camptothecin treatment (compared to the single mutants). tyrosyl-DNA phosphodiesterase-like protein;(source:Araport11) Ipc08G0017200 AT1G61790.2 0 Encodes the OST3/6 subunit of the hetero-oligomeric plant oligosaccharyltransferase complex (OST). Also identified by GWAS as having a role in interspecific pollen tube recognition. Oligosaccharyltransferase complex/magnesium transporter family protein;(source:Araport11) Ipc08G0017190 AT1G21920.2 0 MRF1 is related to SET7/9 proteins but contains an atypical SET domain. It is expressed in phloem and mutants have a weak late flowering phenotype. Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc08G0017210 AT4G04900.2 0 encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Most similar to RIC9 and RIC11 (subfamily group I). Gene is expressed predominantly in roots, leaves, and seedlings. ROP-interactive CRIB motif-containing protein 10;(source:Araport11) Ipc08G0017220 AT4G21750.4 0 Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene Primes spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein;(source:Araport11) Ipc08G0017230 AT4G05000.3 0 0 Vacuolar protein sorting-associated protein VPS28 family protein;(source:Araport11) Ipc08G0017240 AT1G61800.1 glucose-6-phosphate/phosphate translocator 2 glucose6-Phosphate/phosphate transporter 2. Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile. glucose-6-phosphate/phosphate translocator 2;(source:Araport11) Ipc08G0017250 AT1G61870.1 pentatricopeptide repeat 336 Generic translation factor involved in mitochondrial translation. pentatricopeptide repeat 336;(source:Araport11) Ipc08G0017260 AT4G04860.1 DERLIN-2.2 0 DERLIN-2.2;(source:Araport11) Ipc08G0017270 AT3G49500.5 0 Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.Loss of function mutants produce ectopic megaspore mother cell and supernumary female gametophytes. RNA-dependent RNA polymerase 6;(source:Araport11) Ipc08G0017280 AT1G28250.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0017290 AT1G67370.1 DNA-binding HORMA family protein meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. DNA-binding HORMA family protein;(source:Araport11) Ipc08G0017300 AT1G11650.2 RNA-binding (RRM/RBD/RNP motifs) family protein Encodes an RNA binding protein with three RNA recognition motifs. The mRNA is cell-to-cell mobile. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0017310 AT1G11660.4 0 0 heat shock protein 70 (Hsp 70) family protein;(source:Araport11) Ipc08G0017320 AT1G61900.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0017330 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0017340 AT1G11700.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc08G0017350 AT1G50660.1 0 0 actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11) Ipc08G0017360 AT4G04720.2 0 member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 21;(source:Araport11) Ipc08G0017370 AT4G21960.1 Peroxidase superfamily protein Encodes AT4g21960 (AT4g21960/T8O5_170). The mRNA is cell-to-cell mobile. Peroxidase superfamily protein;(source:Araport11) Ipc08G0017380 AT4G04630.1 Protein of unknown function, DUF584 0 senescence regulator (Protein of unknown function, DUF584);(source:Araport11) Ipc08G0017390 AT1G62040.1 Ubiquitin-like superfamily protein Autophagy protein. Ubiquitin-like superfamily protein;(source:Araport11) Ipc08G0017400 AT4G21990.1 APS reductase 3 Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. APS reductase 3;(source:Araport11) Ipc08G0017410 AT1G11820.2 O-Glycosyl hydrolases family 17 protein 0 O-Glycosyl hydrolases family 17 protein;(source:Araport11) Ipc08G0017420 AT1G11800.1 endonuclease/exonuclease/phosphatase family protein 0 endonuclease/exonuclease/phosphatase family protein;(source:Araport11) Ipc08G0017430 AT4G22030.1 F-box family protein with a domain of unknown function (DUF295) 0 F-box protein with a domain protein;(source:Araport11) Ipc08G0017440 AT5G42570.1 B-cell receptor-associated 31-like 0 B-cell receptor-associated 31-like protein;(source:Araport11) Ipc08G0017450 AT1G11910.1 aspartic proteinase A1 Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8). aspartic proteinase A1;(source:Araport11) Ipc08G0017460 AT1G62300.1 WRKY family transcription factor Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress. WRKY family transcription factor;(source:Araport11) Ipc08G0017470 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0017480 AT1G11925.1 Stigma-specific Stig1 family protein Encodes a Stigma-specific Stig1 family protein Stigma-specific Stig1 family protein;(source:Araport11) Ipc08G0017490 AT5G47530.1 Auxin-responsive family protein 0 Auxin-responsive family protein;(source:Araport11) Ipc08G0017500 AT1G11930.2 Predicted pyridoxal phosphate-dependent enzyme, YBL036C type 0 Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11) Ipc08G0017510 AT4G04360.1 Protein of unknown function (DUF1068) 0 transmembrane protein, putative (DUF1068);(source:Araport11) Ipc08G0017520 AT1G11940.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc08G0017530 AT4G04350.1 tRNA synthetase class I (I, L, M and V) family protein 0 tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11) Ipc08G0017540 AT4G22120.6 ERD (early-responsive to dehydration stress) family protein Calcium-permeable stretch activated cation channel. ERD (early-responsive to dehydration stress) family protein;(source:Araport11) Ipc08G0017550 AT3G21630.1 chitin elicitor receptor kinase 1 LysM receptor-like kinase, based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity. Involved in the perception and transduction of the chitin oligosaccharide elicitor. Located in the plasma membrane. CERK1 phosphorylates LIK1, a LLR-RLK that is involved in innate immunity, chitin elicitor receptor kinase 1;(source:Araport11) Ipc08G0017560 AT4G22130.1 STRUBBELIG-receptor family 8 0 STRUBBELIG-receptor family 8;(source:Araport11) Ipc08G0017570 AT1G62340.1 PA-domain containing subtilase family protein Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plants PA-domain containing subtilase family protein;(source:Araport11) Ipc08G0017580 AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Encoding a chromatin remodeling factor that regulates flowering time. PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11) Ipc08G0017590 AT4G22190.1 0 0 serine/arginine repetitive matrix-like protein;(source:Araport11) Ipc08G0017600 AT4G04025.1 0 0 transcription repressor;(source:Araport11) Ipc08G0017610 AT1G05010.1 ethylene-forming enzyme Encodes 1-aminocyclopropane-1-carboxylate oxidase ethylene-forming enzyme;(source:Araport11) Ipc08G0017620 AT1G05000.1 Phosphotyrosine protein phosphatases superfamily protein Encodes an atypical dual-specificity phosphatase. Phosphotyrosine protein phosphatases superfamily protein;(source:Araport11) Ipc08G0017630 AT2G32950.1 Transducin/WD40 repeat-like superfamily protein Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light. The mRNA is cell-to-cell mobile. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0017640 AT3G20290.3 0 Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520). EPS15 homology domain 1;(source:Araport11) Ipc08G0017650 AT4G05530.1 indole-3-butyric acid response 1 Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA. The mRNA is cell-to-cell mobile. indole-3-butyric acid response 1;(source:Araport11) Ipc08G0017660 AT4G22290.1 Ubiquitin-specific protease family C19-related protein Paralog of SHOU4-like Ubiquitin-specific protease family C19-related protein;(source:Araport11) Ipc08G0017670 AT1G12020.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0017680 AT4G22300.1 carboxylesterases Formerly known as SOBER1, this locus was split in the TAIR10 annotation into AT4G22300 and AT4G22305. This locus is now known as TIPSY1 and AT4G22305 corresponds to SOBER1. carboxylesterase;(source:Araport11) Ipc08G0017690 AT4G22320.2 0 0 golgin family A protein;(source:Araport11) Ipc08G0017700 AT1G74050.1 Ribosomal protein L6 family protein 0 Ribosomal protein L6 family protein;(source:Araport11) Ipc08G0017710 AT4G28320.1 Glycosyl hydrolase superfamily protein Encodes a endo-beta-mannanase involved in seed germination. Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc08G0017720 AT3G51970.1 acyl-CoA sterol acyl transferase 1 0 acyl-CoA sterol acyl transferase 1;(source:Araport11) Ipc08G0017730 AT3G51970.1 acyl-CoA sterol acyl transferase 1 0 acyl-CoA sterol acyl transferase 1;(source:Araport11) Ipc08G0017740 #N/A #N/A #N/A #N/A Ipc08G0017750 AT3G07880.1 Immunoglobulin E-set superfamily protein RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth. Immunoglobulin E-set superfamily protein;(source:Araport11) Ipc08G0017760 AT5G20130.1 0 0 sulfate adenylyltransferase subunit;(source:Araport11) Ipc08G0017770 AT4G12590.1 Protein of unknown function DUF106, transmembrane 0 ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane);(source:Araport11) Ipc08G0017780 AT2G37500.1 arginine biosynthesis protein ArgJ family 0 arginine biosynthesis protein ArgJ family;(source:Araport11) Ipc08G0017790 #N/A #N/A #N/A #N/A Ipc08G0017800 AT4G12570.1 ubiquitin protein ligase 5 Knock-out mutants showed accelerated senescence of leaves. The mRNA is cell-to-cell mobile. ubiquitin protein ligase 5;(source:Araport11) Ipc08G0017810 AT5G47540.1 Mo25 family protein 0 Mo25 family protein;(source:Araport11) Ipc08G0017820 AT3G02870.1 Inositol monophosphatase family protein Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis. Inositol monophosphatase family protein;(source:Araport11) Ipc08G0017830 AT2G02570.4 nucleic acid binding;RNA binding 0 nucleic acid binding/RNA binding protein;(source:Araport11) Ipc08G0017840 AT1G59740.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0017850 AT5G49880.1 mitotic checkpoint family protein Encodes a spindle assembly checkpoint protein MAD1. The mRNA is cell-to-cell mobile. mitotic checkpoint family protein;(source:Araport11) Ipc08G0017860 AT1G59750.2 auxin response factor 1 Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions. auxin response factor 1;(source:Araport11) Ipc08G0017870 AT2G32510.1 mitogen-activated protein kinase kinase kinase 17 member of MEKK subfamily mitogen-activated protein kinase kinase kinase 17;(source:Araport11) Ipc08G0017880 AT5G49900.3 0 0 Beta-glucosidase, GBA2 type family protein;(source:Araport11) Ipc08G0017890 AT1G09600.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0017900 AT1G09610.1 Protein of unknown function (DUF579) 0 glucuronoxylan 4-O-methyltransferase-like protein (DUF579);(source:Araport11) Ipc08G0017910 AT3G11730.1 Ras-related small GTP-binding family protein Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein. Ras-related small GTP-binding family protein;(source:Araport11) Ipc08G0017920 AT1G09630.1 RAB GTPase 11C Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate. RAB GTPase 11C;(source:Araport11) Ipc08G0017930 AT1G57765.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0017940 AT1G57870.4 0 0 shaggy-like kinase 42;(source:Araport11) Ipc08G0017950 AT5G49910.1 chloroplast heat shock protein 70-2 Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile. chloroplast heat shock protein 70-2;(source:Araport11) Ipc08G0017960 AT5G49920.1 Octicosapeptide/Phox/Bem1p family protein 0 Octicosapeptide/Phox/Bem1p family protein;(source:Araport11) Ipc08G0017970 AT5G05010.2 clathrin adaptor complexes medium subunit family protein 0 clathrin adaptor complexes medium subunit family protein;(source:Araport11) Ipc08G0017980 AT1G09812.1 0 0 multidrug resistance protein;(source:Araport11) Ipc08G0017990 AT5G65700.2 Leucine-rich receptor-like protein kinase family protein Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0018000 AT1G09810.2 0 0 evolutionarily conserved C-terminal region 11;(source:Araport11) Ipc08G0018010 AT1G15380.2 Lactoylglutathione lyase / glyoxalase I family protein Glyoxalase which affects ABA?JA crosstalk. Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11) Ipc08G0018020 AT1G58070.1 0 WALLIN is an actin binding protein involved in ROP11 mediated xylem pit patterning. WEB family protein;(source:Araport11) Ipc08G0018030 AT5G49940.1 NIFU-like protein 2 Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast. NIFU-like protein 2;(source:Araport11) Ipc08G0018040 AT2G40360.1 Transducin/WD40 repeat-like superfamily protein Encodes BOP1, an ortholog of Block of cell proliferation (BOP) protein. A T-DNA null allele of the BOP1 gene is lethal, and a 50% decrease in transcript accumulation is sufficient to cause severe developmental defects linked to defective cell division. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0018050 AT4G06599.1 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc08G0018060 AT1G58110.2 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc08G0018070 AT4G06599.1 ubiquitin family protein 0 ubiquitin family protein;(source:Araport11) Ipc08G0018080 AT3G58970.1 magnesium transporter 6 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 6;(source:Araport11) Ipc08G0018090 AT3G28853.1 0 0 B3 DNA-binding domain protein;(source:Araport11) Ipc08G0018100 AT1G11000.3 0 A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). Seven transmembrane MLO family protein;(source:Araport11) Ipc08G0018110 AT1G10950.1 transmembrane nine 1 Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. transmembrane nine 1;(source:Araport11) Ipc08G0018120 AT1G60940.2 SNF1-related protein kinase 2.10 encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. SNF1-related protein kinase 2.10;(source:Araport11) Ipc08G0018130 AT1G71220.1 UDP-glucose:glycoprotein glucosyltransferases;transferases, transferring hexosyl groups;transferases, transferring glycosyl groups Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling. EMS-MUTAGENIZED BRI1 SUPPRESSOR 1;(source:Araport11) Ipc08G0018140 AT5G50460.1 secE/sec61-gamma protein transport protein 0 secE/sec61-gamma protein transport protein;(source:Araport11) Ipc08G0018150 AT1G11050.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0018160 AT1G11040.1 HSP40/DnaJ peptide-binding protein 0 HSP40/DnaJ peptide-binding protein;(source:Araport11) Ipc08G0018170 AT4G27640.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc08G0018180 AT1G03900.1 non-intrinsic ABC protein 4 member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain. non-intrinsic ABC protein 4;(source:Araport11) Ipc08G0018190 AT1G61000.1 0 0 kinetochore protein;(source:Araport11) Ipc08G0018200 AT1G71170.1 6-phosphogluconate dehydrogenase family protein 0 6-phosphogluconate dehydrogenase family protein;(source:Araport11) Ipc08G0018210 AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein Member of the P subfamily of PRR proteins. Loss of function results in defects in abnormal plastid RNA edit and chloroplast biogenesis Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0018220 AT2G17970.9 0 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0018230 AT4G36090.2 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0 oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11) Ipc08G0018240 AT1G60890.1 Phosphatidylinositol-4-phosphate 5-kinase family protein 0 Phosphatidylinositol-4-phosphate 5-kinase family protein;(source:Araport11) Ipc08G0018250 AT1G10890.4 0 0 arginine/glutamate-rich 1 protein;(source:Araport11) Ipc08G0018260 AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein 0 emp24/gp25L/p24 family/GOLD family protein;(source:Araport11) Ipc08G0018270 AT1G10790.1 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0018280 AT1G25290.2 RHOMBOID-like protein 10 0 RHOMBOID-like protein 10;(source:Araport11) Ipc08G0018290 AT4G26770.1 Phosphatidate cytidylyltransferase family protein 0 Phosphatidate cytidylyltransferase family protein;(source:Araport11) Ipc08G0018300 AT4G15770.1 RNA binding 0 RNA binding protein;(source:Araport11) Ipc08G0018310 AT5G24690.1 Protein of unknown function (DUF3411) 0 plant/protein, putative (DUF3411);(source:Araport11) Ipc08G0018320 AT5G47940.1 0 0 40S ribosomal protein S27;(source:Araport11) Ipc08G0018330 AT2G26070.1 Protein of unknown function (DUF778) Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1. protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778);(source:Araport11) Ipc08G0018340 AT3G59670.1 0 0 elongation factor;(source:Araport11) Ipc08G0018350 AT2G01070.1 Lung seven transmembrane receptor family protein 0 Lung seven transmembrane receptor family protein;(source:Araport11) Ipc08G0018360 AT1G68140.4 0 0 zinc finger/BTB domain protein, putative (DUF1644);(source:Araport11) Ipc08G0018370 AT5G58230.1 Transducin/WD40 repeat-like superfamily protein Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0018380 AT4G08500.1 MAPK/ERK kinase kinase 1 Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1. MAPK/ERK kinase kinase 1;(source:Araport11) Ipc08G0018390 AT3G27090.3 0 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc08G0018400 AT1G36990.1 0 0 C-jun-amino-terminal kinase-interacting protein;(source:Araport11) Ipc08G0018410 AT1G68150.1 WRKY DNA-binding protein 9 member of WRKY Transcription Factor; Group II-b The mRNA is cell-to-cell mobile. WRKY DNA-binding protein 9;(source:Araport11) Ipc08G0018420 AT1G15200.2 protein-protein interaction regulator family protein 0 protein-protein interaction regulator family protein;(source:Araport11) Ipc08G0018430 AT1G43170.9 ribosomal protein 1 Encodes a cytoplasmic ribosomal protein. The mRNA is cell-to-cell mobile. ribosomal protein 1;(source:Araport11) Ipc08G0018440 AT1G15190.1 Fasciclin-like arabinogalactan family protein 0 Fasciclin-like arabinogalactan family protein;(source:Araport11) Ipc08G0018450 AT5G44080.1 Basic-leucine zipper (bZIP) transcription factor family protein 0 Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc08G0018460 AT1G18740.1 Protein of unknown function (DUF793) 0 ROH1, putative (DUF793);(source:Araport11) Ipc08G0018480 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0018470 AT4G36220.1 ferulic acid 5-hydroxylase 1 encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1;(source:Araport11) Ipc08G0018490 AT1G25280.1 tubby like protein 10 Member of TLP family tubby like protein 10;(source:Araport11) Ipc08G0018500 AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc08G0018510 AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc08G0018520 AT1G25270.1 nodulin MtN21 /EamA-like transporter family protein nodulin MtN21-like transporter family protein nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc08G0018530 AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein 0 Ubiquinol-cytochrome C reductase hinge protein;(source:Araport11) Ipc08G0018540 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc08G0018550 AT1G69200.1 fructokinase-like 2 Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription. The mRNA is cell-to-cell mobile. fructokinase-like protein;(source:Araport11) Ipc08G0018560 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc08G0018570 AT3G43660.1 Vacuolar iron transporter (VIT) family protein The gene encodes a putative nodulin-like21 protein. Vacuolar iron transporter (VIT) family protein;(source:Araport11) Ipc08G0018580 AT5G42240.1 serine carboxypeptidase-like 42 0 serine carboxypeptidase-like 42;(source:Araport11) Ipc08G0018590 AT4G25980.1 Peroxidase superfamily protein 0 peroxidase superfamily protein;(source:Araport11) Ipc08G0018600 AT1G03050.1 ENTH/ANTH/VHS superfamily protein Phosphatidylinositol binding clathrin assembly protein 5A/B are recent paralogs with overlapping functions in recycling ANXUR proteins to the pollen tube membrane. ENTH/ANTH/VHS superfamily protein;(source:Araport11) Ipc08G0018610 AT4G25970.1 phosphatidylserine decarboxylase 3 Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER. The mRNA is cell-to-cell mobile. phosphatidylserine decarboxylase 3;(source:Araport11) Ipc08G0018620 AT2G32230.2 0 Encodes a protein-only RNase P that is involved in the 5? cleavage of the precursor tRNAs and is able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. Mutants show a drastic reduction in the levels of mature plastid tRNA-Phe(GAA) and tRNA-Arg(ACG), limiting plastid gene expression. proteinaceous RNase P 1;(source:Araport11) Ipc08G0018630 AT5G64530.1 xylem NAC domain 1 0 xylem NAC domain 1;(source:Araport11) Ipc08G0018640 AT5G64570.1 beta-D-xylosidase 4 Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4;(source:Araport11) Ipc08G0018650 AT4G33430.1 BRI1-associated receptor kinase Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase;(source:Araport11) Ipc08G0018660 AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11) Ipc08G0018670 AT1G15820.1 light harvesting complex photosystem II subunit 6 Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II. light harvesting complex photosystem II subunit 6;(source:Araport11) Ipc08G0018680 AT5G39580.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc08G0018690 AT5G39580.1 Peroxidase superfamily protein 0 Peroxidase superfamily protein;(source:Araport11) Ipc08G0018700 AT1G36050.2 Endoplasmic reticulum vesicle transporter protein 0 Endoplasmic reticulum vesicle transporter protein;(source:Araport11) Ipc08G0018710 AT4G29660.1 embryo defective 2752 0 embryo defective 2752;(source:Araport11) Ipc08G0018720 AT4G09530.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc08G0018730 AT5G64180.2 0 0 tropomyosin;(source:Araport11) Ipc08G0018740 AT4G33520.1 P-type ATP-ase 1 Encodes a putative metal-transporting P-type ATPase PAA1. An alternative-splicing event of the PAA1 pre-mRNA produces a copper chaperon named PCH1. The mRNA is cell-to-cell mobile. P-type ATP-ase 1;(source:Araport11) Ipc08G0018750 AT5G64210.1 alternative oxidase 2 encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria. alternative oxidase 2;(source:Araport11) Ipc08G0018760 AT1G34750.3 0 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc08G0018770 AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. translocon at the outer membrane of chloroplasts 64-V;(source:Araport11) Ipc08G0018780 AT5G09430.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0018790 AT1G22310.1 methyl-CPG-binding domain 8 Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. methyl-CPG-binding domain 8;(source:Araport11) Ipc08G0018800 AT1G62830.1 LSD1-like 1 Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation. LSD1-like 1;(source:Araport11) Ipc08G0018810 AT2G22360.1 DNAJ heat shock family protein 0 DNAJ heat shock family protein;(source:Araport11) Ipc08G0018820 AT5G64250.2 Aldolase-type TIM barrel family protein 0 Aldolase-type TIM barrel family protein;(source:Araport11) Ipc08G0018830 AT5G64260.1 EXORDIUM like 2 0 EXORDIUM like 2;(source:Araport11) Ipc08G0018840 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc08G0018850 AT5G64290.1 dicarboxylate transport 2.1 0 dicarboxylate transport 2.1;(source:Araport11) Ipc08G0018860 AT2G14095.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0018870 AT1G72220.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0018880 AT3G63390.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0018890 AT4G10490.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0018900 AT4G10490.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0018910 AT1G12680.1 phosphoenolpyruvate carboxylase-related kinase 2 0 phosphoenolpyruvate carboxylase-related kinase 2;(source:Araport11) Ipc08G0018920 AT5G09460.1 sequence-specific DNA binding transcription factors;transcription regulators 0 transcription factor bHLH143;(source:Araport11) Ipc08G0018930 AT5G64350.1 FK506-binding protein 12 Encodes FK506-binding protein 12 (FKBP12 or FKP12). FKP12 overexpression dramatically enhances rapamycin sensitivity, whereas rapamycin inhibition is relieved in transgenic plants deficient in FKP12. FK506-binding protein 12;(source:Araport11) Ipc08G0018940 AT5G09520.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc08G0018950 AT4G33580.3 0 0 beta carbonic anhydrase 5;(source:Araport11) Ipc08G0018960 AT5G64360.7 0 EIP9 interacts with EMF1 to regulate flowering. It functions partially redundantly with SDJ2 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes. Chaperone DnaJ-domain superfamily protein;(source:Araport11) Ipc08G0018970 AT2G22540.3 0 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. K-box region and MADS-box transcription factor family protein;(source:Araport11) Ipc08G0018980 AT5G09550.1 GDP dissociation inhibitor family protein / Rab GTPase activator family protein 0 GDP dissociation inhibitor family protein / Rab GTPase activator family protein;(source:Araport11) Ipc08G0018990 AT5G64370.1 beta-ureidopropionase PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation. beta-ureidopropionase;(source:Araport11) Ipc08G0019000 AT2G22570.1 nicotinamidase 1 encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway. nicotinamidase 1;(source:Araport11) Ipc08G0019010 AT1G21150.1 Mitochondrial transcription termination factor family protein 0 Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc08G0019020 AT5G64380.1 Inositol monophosphatase family protein 0 Inositol monophosphatase family protein;(source:Araport11) Ipc08G0019030 AT1G51580.1 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc08G0019040 AT4G33640.1 0 0 costars family protein;(source:Araport11) Ipc08G0019050 AT3G21175.2 ZIM-like 1 member of a novel family of plant-specific GATA-type transcription factors. ZIM-like 1;(source:Araport11) Ipc08G0019060 AT5G09570.1 Cox19-like CHCH family protein 0 Cox19-like CHCH family protein;(source:Araport11) Ipc08G0019070 AT2G23970.1 Class I glutamine amidotransferase-like superfamily protein 0 Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc08G0019080 AT2G14170.1 aldehyde dehydrogenase 6B2 Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase aldehyde dehydrogenase 6B2;(source:Araport11) Ipc08G0019090 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019100 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019110 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019120 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019130 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019140 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019150 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019160 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019170 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019180 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019190 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019200 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019210 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019220 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019230 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019240 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019250 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019260 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019270 AT5G10530.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc08G0019280 AT2G04305.1 Magnesium transporter CorA-like family protein 0 Magnesium transporter CorA-like family protein;(source:Araport11) Ipc08G0019290 AT5G09590.1 mitochondrial HSO70 2 heat shock protein 70 (Hsc70-5); nuclear mitochondrial HSO70 2;(source:Araport11) Ipc08G0019300 AT5G10550.1 global transcription factor group E2 This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation. global transcription factor group E2;(source:Araport11) Ipc08G0019310 AT5G40050.1 F-box/FBD-like domains containing protein 0 F-box/FBD-like domains containing protein;(source:Araport11) Ipc08G0019320 AT4G37880.1 LisH/CRA/RING-U-box domains-containing protein 0 LisH/CRA/RING-U-box domains-containing protein;(source:Araport11) Ipc08G0019330 AT4G04850.2 K+ efflux antiporter 3 Encodes a potassium efflux antiporter; has three splice forms KEA3.1, KEA3.2, and KEA3.3, KEA3.2 is the most abundant splice form in all plant organs (silique, flower, leaf and root). KEA3.1 and KEA3.3 are minor variants that can be found in flowers and in leaves. KEA3 is localized to the thylakoid membrane and enriched in the stromal lamellae. It allows proton efflux from the thylakoid lumen by proton/potassium antiport. K+ efflux antiporter 3;(source:Araport11) Ipc08G0019340 AT2G22730.3 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0019360 AT5G09650.1 pyrophosphorylase 6 Encodes a protein with inorganic pyrophosphatase activity. pyrophosphorylase 6;(source:Araport11) Ipc08G0019350 AT1G07530.1 SCARECROW-like 14 Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. SCARECROW-like 14;(source:Araport11) Ipc08G0019370 AT4G33670.1 NAD(P)-linked oxidoreductase superfamily protein Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc08G0019380 AT4G37850.2 0 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0019390 AT2G22780.1 peroxisomal NAD-malate dehydrogenase 1 encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA. peroxisomal NAD-malate dehydrogenase 1;(source:Araport11) Ipc08G0019400 AT4G33680.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes an L,L-diaminopimelate aminotransferase. Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11) Ipc08G0019410 AT2G14520.4 0 0 CBS domain protein (DUF21);(source:Araport11) Ipc08G0019420 AT5G65810.1 0 Encodes CGR3 (cotton Golgi-related 3). CGR3 and a close homologue CGR2 have overlapping roles in pectin methylesterification and plant growth. transmembrane protein;(source:Araport11) Ipc08G0019430 AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc08G0019440 AT2G14610.1 pathogenesis-related gene 1 PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive. pathogenesis-related protein 1;(source:Araport11) Ipc08G0019450 AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein 0 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11) Ipc08G0019460 AT1G10020.1 Protein of unknown function (DUF1005) 0 formin-like protein (DUF1005);(source:Araport11) Ipc08G0019470 AT4G33760.1 tRNA synthetase class II (D, K and N) family protein 0 tRNA synthetase class II (D, K and N) family protein;(source:Araport11) Ipc08G0019480 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc08G0019490 AT5G49630.1 amino acid permease 6 Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. amino acid permease 6;(source:Araport11) Ipc08G0019500 AT4G33780.1 0 0 ATP phosphoribosyltransferase regulatory subunit;(source:Araport11) Ipc08G0019510 AT1G23780.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0019520 AT1G50000.1 methyltransferases 0 methyltransferase;(source:Araport11) Ipc08G0019530 AT1G10140.1 Uncharacterised conserved protein UCP031279 0 Uncharacterized conserved protein UCP031279;(source:Araport11) Ipc08G0019540 AT3G19640.1 magnesium transporter 4 Transmembrane magnesium transporter. One of nine family members. magnesium transporter 4;(source:Araport11) Ipc08G0019550 AT4G33800.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0019560 AT1G60030.1 nucleobase-ascorbate transporter 7 0 nucleobase-ascorbate transporter 7;(source:Araport11) Ipc08G0019570 AT2G32190.1 0 0 cysteine-rich/transmembrane domain A-like protein;(source:Araport11) Ipc08G0019580 AT1G10200.1 GATA type zinc finger transcription factor family protein Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. GATA type zinc finger transcription factor family protein;(source:Araport11) Ipc08G0019590 AT3G19620.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc08G0019600 AT2G14740.2 vaculolar sorting receptor 3 Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds. The mRNA is cell-to-cell mobile. vaculolar sorting receptor 3;(source:Araport11) Ipc08G0019610 AT3G19590.1 Transducin/WD40 repeat-like superfamily protein Encodes a protein that may have a role in the spindle assembly checkpoint. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0019620 AT1G27730.1 salt tolerance zinc finger Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. salt tolerance zinc finger;(source:Araport11) Ipc08G0019630 AT3G02330.1 MEF13 is an member of the E-domain pentatricopeptide repeat (PPR) superfamily. It is involved in mitochondrial mRNA editing with at least 8 known targets. Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510. Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0019640 AT2G14820.2 0 A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. Phototropic-responsive NPH3 family protein;(source:Araport11) Ipc08G0019650 AT1G49890.1 Family of unknown function (DUF566) 0 QWRF motif protein (DUF566);(source:Araport11) Ipc08G0019660 AT3G19553.1 Amino acid permease family protein Encodes POLYAMINE UPTAKE TRANSPORTER 5, an amino acid permease family protein. Amino acid permease family protein;(source:Araport11) Ipc08G0019670 AT4G33905.1 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11) Ipc08G0019680 AT4G24220.1 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0019690 AT4G24220.1 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0019700 AT4G24220.1 NAD(P)-binding Rossmann-fold superfamily protein encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-Δ-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0019710 AT2G14880.1 SWIB/MDM2 domain superfamily protein 0 SWIB/MDM2 domain superfamily protein;(source:Araport11) Ipc08G0019720 AT4G37450.2 0 AGP18 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP17 and AGP19, other lysine-rich AGPs. It is expressed in young leaves, shoots, roots and flowers and is active in the regulation of the selection and survival of megaspores. arabinogalactan protein 18;(source:Araport11) Ipc08G0019730 AT3G19540.1 Protein of unknown function (DUF620) 0 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11) Ipc08G0019740 AT3G25580.1 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc08G0019750 AT5G02860.5 0 0 Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11) Ipc08G0019760 AT2G14910.1 0 0 MAR-binding filament-like protein;(source:Araport11) Ipc08G0019770 AT3G19510.2 0 Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains. Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11) Ipc08G0019780 AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein 0 C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc08G0019790 AT2G15220.1 Plant basic secretory protein (BSP) family protein 0 Plant basic secretory protein (BSP) family protein;(source:Araport11) Ipc08G0019800 AT1G49820.1 S-methyl-5-thioribose kinase encodes 5-methylthioribose kinase, involved in methionine cycle The mRNA is cell-to-cell mobile. S-methyl-5-thioribose kinase;(source:Araport11) Ipc08G0019810 AT4G15480.1 UDP-Glycosyltransferase superfamily protein Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc08G0019820 AT3G19450.1 GroES-like zinc-binding alcohol dehydrogenase family protein Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. The mRNA is cell-to-cell mobile. GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11) Ipc08G0019830 AT2G15240.1 UNC-50 family protein 0 UNC-50 family protein;(source:Araport11) Ipc08G0019840 AT4G37260.1 myb domain protein 73 Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile. myb domain protein 73;(source:Araport11) Ipc08G0019850 AT2G02650.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0019860 AT3G19460.5 0 0 Reticulon family protein;(source:Araport11) Ipc08G0019870 AT2G01640.2 0 0 ribosome biogenesis protein;(source:Araport11) Ipc08G0019880 AT4G35220.1 Cyclase family protein 0 Cyclase family protein;(source:Araport11) Ipc08G0019890 AT4G35220.1 Cyclase family protein 0 Cyclase family protein;(source:Araport11) Ipc08G0019900 AT4G34160.1 CYCLIN D3;1 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. CYCLIN D3;(source:Araport11) Ipc08G0019910 AT4G34150.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc08G0019920 AT2G15480.1 UDP-glucosyl transferase 73B5 0 UDP-glucosyl transferase 73B5;(source:Araport11) Ipc08G0019930 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc08G0019940 AT4G34131.1 UDP-glucosyl transferase 73B3 0 UDP-glucosyl transferase 73B3;(source:Araport11) Ipc08G0019950 AT3G19320.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc08G0019960 AT3G50220.1 Protein of unknown function (DUF579) Encode a DUF579 (domain of unknown function 579) containing protein essential for normal xylan synthesis and deposition in the secondary cell wall. IRREGULAR XYLEM protein (DUF579);(source:Araport11) Ipc08G0019970 AT3G62120.3 0 Encodes a cytosolic prolyl-tRNA synthetase. Class II aaRS and biotin synthetases superfamily protein;(source:Araport11) Ipc08G0019980 AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc08G0019990 AT2G15530.7 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0020000 AT1G49780.1 plant U-box 26 PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation. plant U-box 26;(source:Araport11) Ipc08G0020010 AT1G49740.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc08G0020020 AT4G34030.1 3-methylcrotonyl-CoA carboxylase MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. The mRNA is cell-to-cell mobile. 3-methylcrotonyl-CoA carboxylase;(source:Araport11) Ipc08G0020030 AT4G34020.1 Class I glutamine amidotransferase-like superfamily protein Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. Class I glutamine amidotransferase-like superfamily protein;(source:Araport11) Ipc08G0020040 AT4G33985.1 Protein of unknown function (DUF1685) 0 membrane insertase, putative (DUF1685);(source:Araport11) Ipc08G0020050 AT1G60860.1 ARF-GAP domain 2 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD2 belongs to the class 1, together with AGD1, AGD3, and AGD4. ARF-GAP domain 2;(source:Araport11) Ipc08G0020060 AT4G33980.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0020070 AT3G19280.1 fucosyltransferase 11 Encodes a protein with core α1,3-fucosyltransferase activity. fucosyltransferase 11;(source:Araport11) Ipc08G0020080 AT4G34410.1 redox responsive transcription factor 1 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Regulates programmed cell death (PCD) inhibitor genes. Involved in retarding programmed cell death under salt stress due to the regulation of processes participating in ROS inhibition. ERF-regulated transcripts belong to the tryptophan biosynthesis, tryptophan metabolism, and downstream plant hormone signal transduction pathways, where ERF109 potentially acts as a ?master switch? mediator of a cascade of consecutive events across the three pathways, promoting plant growth and re-adjustment to homeostasis due the direct participation in auxin biosynthesis leading to the plant?s ability to tolerate salt stress. redox responsive transcription factor 1;(source:Araport11) Ipc08G0020090 AT3G19230.1 Leucine-rich repeat (LRR) family protein 0 Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc08G0020100 AT1G49620.1 Cyclin-dependent kinase inhibitor family protein Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle. Cyclin-dependent kinase inhibitor family protein;(source:Araport11) Ipc08G0020110 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0020120 AT1G47480.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0020130 AT3G48700.1 carboxyesterase 13 0 carboxyesterase 13;(source:Araport11) Ipc08G0020140 AT1G19190.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc08G0020150 AT2G15730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0020160 AT3G19130.1 RNA-binding protein 47B RBP47B, is a component of the stress granule proteome and interacts with 2',3'-cAMP. RNA-binding protein 47B;(source:Araport11) Ipc08G0020170 AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein Encodes a novel nucleic acid-binding protein that is required for both RdDM (RNA-directed DNA methylation) and pre-mRNA splicing. C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11) Ipc08G0020180 AT3G19120.1 PIF / Ping-Pong family of plant transposases 0 PIF / Ping-Pong family of plant transposase;(source:Araport11) Ipc08G0020190 AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0020200 AT4G18790.1 NRAMP metal ion transporter family protein member of Nramp2 family NRAMP metal ion transporter family protein;(source:Araport11) Ipc08G0020210 AT2G15780.1 Cupredoxin superfamily protein 0 Cupredoxin superfamily protein;(source:Araport11) Ipc08G0020220 AT2G26520.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0020230 AT3G19090.1 RNA-binding protein 0 RNA-binding protein;(source:Araport11) Ipc08G0020240 AT4G37180.1 Homeodomain-like superfamily protein UIF1 is a nuclear and cytoplasmically localized myb-domain containing member of the GARP G2-like subfamily of transcription factors. Interacts with ULT1 and binds to the WUS promoter. UIF1 binding domains are also found in CUC and AG promoters suggesting they are also direct targets. This locus was also identified as a putative cytoskeletal protein in a yeast screen. Homeodomain-like superfamily protein;(source:Araport11) Ipc08G0020250 AT4G33950.1 Protein kinase superfamily protein Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network. Protein kinase superfamily protein;(source:Araport11) Ipc08G0020260 AT2G23610.1 methyl esterase 3 Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro. methyl esterase 3;(source:Araport11) Ipc08G0020270 AT3G19020.2 0 Pollen expressed protein required for pollen tube growth. Along with other members of the LRX family, interacts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility. Leucine-rich repeat (LRR) family protein;(source:Araport11) Ipc08G0020280 AT2G15900.1 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0 phox domain-containing protein;(source:Araport11) Ipc08G0020290 AT3G44150.1 0 0 Expp1 protein;(source:Araport11) Ipc08G0020300 AT5G67540.1 Arabinanase/levansucrase/invertase 0 Arabinanase/levansucrase/invertase;(source:Araport11) Ipc08G0020310 AT3G01280.1 voltage dependent anion channel 1 Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile. voltage dependent anion channel 1;(source:Araport11) Ipc08G0020320 AT5G24360.3 inositol requiring 1-1 IRE1A and IRE1B catalyze bZIP60 mRNA splicing, producing the active bZIP60 transcription factor. inositol requiring 1-1;(source:Araport11) Ipc08G0020330 AT2G23460.1 extra-large G-protein 1 encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits. extra-large G-protein 1;(source:Araport11) Ipc08G0020340 AT3G18950.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0020350 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc08G0020360 AT3G18940.1 clast3-related 0 clast3-like protein;(source:Araport11) Ipc08G0020370 AT5G42650.1 allene oxide synthase Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS. allene oxide synthase;(source:Araport11) Ipc08G0020380 AT3G50830.1 cold-regulated 413-plasma membrane 2 cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable. cold-regulated 413-plasma membrane 2;(source:Araport11) Ipc08G0020390 AT1G49430.1 long-chain acyl-CoA synthetase 2 Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation. long-chain acyl-CoA synthetase 2;(source:Araport11) Ipc08G0020400 AT3G18930.3 0 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0020410 AT2G15980.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0020420 AT3G50800.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0020430 AT2G23690.1 0 0 HTH-type transcriptional regulator;(source:Araport11) Ipc08G0020440 AT2G16060.1 hemoglobin 1 Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. Overexpression impairs cold stress-induced nitric oxide (NO) production. hemoglobin 1;(source:Araport11) Ipc08G0020450 AT5G66600.7 0 0 electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc08G0020460 AT5G06920.1 FASCICLIN-like arabinogalactan protein 21 precursor 0 FASCICLIN-like arabinogalactan protein 21 precursor;(source:Araport11) Ipc08G0020470 AT3G18890.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0020480 AT4G34360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc08G0020490 AT1G47530.1 MATE efflux family protein 0 MATE efflux family protein;(source:Araport11) Ipc08G0020500 AT1G19310.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0020510 AT3G18860.1 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0020520 AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress. Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc08G0020530 AT1G49310.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0020540 AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative 0 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP;(source:Araport11) Ipc08G0020550 AT3G18870.1 Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family member. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc08G0020560 AT5G42720.1 Glycosyl hydrolase family 17 protein 0 Glycosyl hydrolase family 17 protein;(source:Araport11) Ipc08G0020570 AT4G34500.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc08G0020580 AT5G60050.1 BTB/POZ domain-containing protein 0 BTB/POZ domain-containing protein;(source:Araport11) Ipc08G0020590 AT4G39260.3 cold, circadian rhythm, and RNA binding 1 Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). cold, circadian rhythm, and RNA binding 1;(source:Araport11) Ipc08G0020600 AT4G39250.1 RAD-like 1 0 RAD-like 1;(source:Araport11) Ipc08G0020610 AT2G21610.2 0 0 pectinesterase 11;(source:Araport11) Ipc08G0020620 AT2G21600.1 endoplasmatic reticulum retrieval protein 1B Key player of retrieval of ER membrane proteins The mRNA is cell-to-cell mobile. endoplasmatic reticulum retrieval protein 1B;(source:Araport11) Ipc08G0020630 AT2G16365.6 0 PCH1 binds and stabilizes the active (Pfr) form of phytochrome B and is involved in the formation of photobodies in the nucleus. PCH1 is expressed in evenings and is associated to the evening complex through binding to phyB, and represses hypocotyl elongation and growth. Using mass spec, the existence of the At2g16365.2 isoform has been verified, however here is no evidence that any of the other three variants are present. Atg2G16365.2 will be assigned PCH1; exon 4 and 5 in the other variants are actually another gene of the F-box/DUF295 family with gene name FDA10. F-box family protein;(source:Araport11) Ipc08G0020640 AT4G39210.2 0 Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11) Ipc08G0020650 AT2G21580.1 Ribosomal protein S25 family protein 0 Ribosomal protein S25 family protein;(source:Araport11) Ipc08G0020670 AT5G55130.2 co-factor for nitrate, reductase and xanthine dehydrogenase 5 putative molybdopterin synthase sulphurylase (cnx5) co-factor for nitrate, reductase and xanthine dehydrogenase 5;(source:Araport11) Ipc08G0020660 AT3G44690.2 0 0 hypothetical protein;(source:Araport11) Ipc08G0020680 AT3G50930.1 cytochrome BC1 synthesis Encodes a protein that is present in a homo-multimeric protein complex on the outer mitochondrial membrane and plays a role in cell death and amplifying salicylic acid signalling. The mRNA is cell-to-cell mobile. cytochrome BC1 synthesi;(source:Araport11) Ipc08G0020690 AT4G34570.1 thymidylate synthase 2 Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function. thymidylate synthase 2;(source:Araport11) Ipc08G0020700 AT2G21540.6 0 0 SEC14-like 3;(source:Araport11) Ipc08G0020710 AT2G21520.1 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc08G0020720 AT4G39150.3 0 0 DNAJ heat shock N-terminal domain-containing protein;(source:Araport11) Ipc08G0020730 AT2G16385.1 0 CAF1 is a peptide hormone expressed in the root stele that specifically binds the endodermis-expressed leucine-rich repeat receptor kinase GASSHO1 (GSO1)/SCHENGEN3 and its homolog, GSO2. Together with CAF2 it is required for formation of the casparian band. aspartate carbamoyltransferase;(source:Araport11) Ipc08G0020740 AT3G11540.1 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a N-acetyl glucosamine transferase that may glycosylate other molecules involved in GA signaling. Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0020750 AT4G39140.5 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0020760 AT4G39110.1 Malectin/receptor-like protein kinase family protein bups1 and bups1/2 double mutants have reduced feritlity due to premature rupture of pollen tubes before they reach the ovule. BUSP1 interacts with RALF4/19 peptide ligands and ANX1/2 receptors. BUPS/ANX signaling may regulate and promote pollen tube growth. Malectin/receptor-like protein kinase family protein;(source:Araport11) Ipc08G0020770 AT2G16390.2 0 Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11) Ipc08G0020780 AT2G21440.1 RNA-binding (RRM/RBD/RNP motifs) family protein 0 RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0020790 AT3G18860.2 transducin family protein / WD-40 repeat family protein 0 transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0020800 AT2G16405.1 Transducin/WD40 repeat-like superfamily protein 0 Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0020810 AT2G16430.2 purple acid phosphatase 10 0 purple acid phosphatase 10;(source:Araport11) Ipc08G0020820 AT3G14250.1 RING/U-box superfamily protein 0 RING/U-box superfamily protein;(source:Araport11) Ipc08G0020830 AT4G39080.1 vacuolar proton ATPase A3 Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast. The mRNA is cell-to-cell mobile. vacuolar proton ATPase A3;(source:Araport11) Ipc08G0020840 AT5G66350.1 Lateral root primordium (LRP) protein-related A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. Lateral root primordium (LRP) protein-like protein;(source:Araport11) Ipc08G0020850 AT4G34630.1 0 0 prostatic spermine-binding-like protein;(source:Araport11) Ipc08G0020860 AT4G39050.1 Kinesin motor family protein 0 Kinesin motor family protein;(source:Araport11) Ipc08G0020870 AT5G07930.1 MEI2 C-terminal RRM only like 2 A member of mei2-like gene family; phylogenetic analysis revealed that it belongs to the fourth clade of mei2-like proteins, with conserved C-terminal RNA recognition motif (RRM) only. MEI2 C-terminal RRM only like 2;(source:Araport11) Ipc08G0020880 AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein 0 RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11) Ipc08G0020890 AT2G21340.1 MATE efflux family protein Encodes a homolog of the multidrug and toxin extrusion transporter ENHANCED DISEASE SUSCEPTIBILITY5 that is constitutively expressed in green tissues independent of pathogen infection and is expressed in the chloroplast envelope. Unlike EDS5, it does not contribute to pathogen-induced SA accumulation. MATE efflux family protein;(source:Araport11) Ipc08G0020900 AT5G25030.1 Domain of unknown function (DUF2431) 0 ATP-binding protein (DUF2431);(source:Araport11) Ipc08G0020910 AT4G34640.1 squalene synthase 1 Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway. The mRNA is cell-to-cell mobile. squalene synthase 1;(source:Araport11) Ipc08G0020920 AT4G34660.1 SH3 domain-containing protein 0 SH3 domain-containing protein;(source:Araport11) Ipc08G0020930 AT4G34640.1 squalene synthase 1 Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway. The mRNA is cell-to-cell mobile. squalene synthase 1;(source:Araport11) Ipc08G0020940 AT2G16485.2 0 Encodes NERD (Needed for RDR2-independent DNA methylation), a plant-specific GW repeat- and PHD finger-containing protein involved in siRNA-dependent DNA methylation. GW repeat- and PHD finger-containing protein NERD;(source:Araport11) Ipc08G0020950 AT1G75560.2 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc08G0020960 AT2G21300.5 0 0 ATP binding microtubule motor family protein;(source:Araport11) Ipc08G0020970 AT2G21280.2 0 A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system. NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0020980 AT4G34710.2 arginine decarboxylase 2 Encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1. arginine decarboxylase 2;(source:Araport11) Ipc08G0021000 AT2G21250.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc08G0020990 AT1G19910.1 ATPase, F0/V0 complex, subunit C protein vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2) ATPase, F0/V0 complex, subunit C protein;(source:Araport11) Ipc08G0021010 AT2G16570.1 GLN phosphoribosyl pyrophosphate amidotransferase 1 Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis GLN phosphoribosyl pyrophosphate amidotransferase 1;(source:Araport11) Ipc08G0021020 AT2G21220.1 SAUR-like auxin-responsive protein family 0 SAUR-like auxin-responsive protein family;(source:Araport11) Ipc08G0021030 AT1G68930.2 0 0 pentatricopeptide (PPR) repeat-containing protein;(source:Araport11) Ipc08G0021040 AT5G18010.1 SAUR-like auxin-responsive protein family Encodes SAUR19 (small auxin up RNA 19). Note that TAIR nomenclature is based on Plant Mol Biol. 2002, 49:373-85 (PMID:12036261). In Planta (2011) 233:1223–1235 (PMID:21327815), At5g18010 is SAUR24. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc08G0021050 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc08G0021060 AT2G21210.1 SAUR-like auxin-responsive protein family Putative auxin-regulated protein whose expression is downregulated in response to chitin oligomers. SAUR-like auxin-responsive protein family;(source:Araport11) Ipc08G0021070 AT4G00430.1 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1;(source:Araport11) Ipc08G0021080 AT4G34840.1 Phosphorylase superfamily protein Encodes one of the 5'-methylthioadenosine nucleosidases (AT4G38800/MTN1; AT4G34840/MTN2). Double mutant, mtn1-1mtn2-1, retains approximately 14% of the MTN enzyme activity present in the wild type and displays a pleiotropic phenotype that includes altered vasculature and impaired fertility. Phosphorylase superfamily protein;(source:Araport11) Ipc08G0021090 AT4G34850.1 Chalcone and stilbene synthase family protein 0 Chalcone and stilbene synthase family protein;(source:Araport11) Ipc08G0021100 AT2G21190.1 ER lumen protein retaining receptor family protein 0 ER lumen protein retaining receptor family protein;(source:Araport11) Ipc08G0021110 AT4G34860.3 0 0 Plant neutral invertase family protein;(source:Araport11) Ipc08G0021120 AT4G30150.1 0 0 Urb2/Npa2 family protein;(source:Araport11) Ipc08G0021140 #N/A #N/A #N/A #N/A Ipc08G0021130 AT2G21180.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0021150 AT2G21170.3 0 Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots. triosephosphate isomerase;(source:Araport11) Ipc08G0021160 AT2G16595.1 Translocon-associated protein (TRAP), alpha subunit 0 Translocon-associated protein (TRAP), alpha subunit;(source:Araport11) Ipc08G0021170 AT4G38770.1 proline-rich protein 4 Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant. proline-rich protein 4;(source:Araport11) Ipc08G0021180 AT4G38760.1 Protein of unknown function (DUF3414) 0 nucleoporin (DUF3414);(source:Araport11) Ipc08G0021190 AT2G21120.1 Protein of unknown function (DUF803) Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis. magnesium transporter, putative (DUF803);(source:Araport11) Ipc08G0021200 AT4G34880.2 0 0 Amidase family protein;(source:Araport11) Ipc08G0021210 AT4G38690.1 PLC-like phosphodiesterases superfamily protein 0 PLC-like phosphodiesterases superfamily protein;(source:Araport11) Ipc08G0021220 AT4G38670.3 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc08G0021230 AT4G38660.1 Pathogenesis-related thaumatin superfamily protein 0 Pathogenesis-related thaumatin superfamily protein;(source:Araport11) Ipc08G0021240 AT4G34950.1 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc08G0021250 AT2G16700.1 actin depolymerizing factor 5 Encodes actin depolymerizing factor 5 (ADF5). actin depolymerizing factor 5;(source:Araport11) Ipc08G0021260 AT4G34980.1 subtilisin-like serine protease 2 Serine protease similar to subtilisin. subtilisin-like serine protease 2;(source:Araport11) Ipc08G0021270 AT4G35000.1 ascorbate peroxidase 3 Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein. ascorbate peroxidase 3;(source:Araport11) Ipc08G0021280 AT2G20990.1 synaptotagmin A Encodes a protein specifically localized to the ER-PM boundary with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance and mechanical stress response. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. SYT1 may have a role in membrane repair such as membrane resealing after freezing induced damage. SYT1 binds to phosphatidylinositol phosphates in vitro. It is distributed to immobile tubules and likely plays an important role in the formation of the tubular ER network as well as in cellular ER-PM tethering. synaptotagmin A;(source:Araport11) Ipc08G0021290 AT4G38600.3 0 encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. HECT ubiquitin protein ligase family protein KAK;(source:Araport11) Ipc08G0021300 AT2G16750.2 0 0 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11) Ipc08G0021310 AT2G16770.2 0 Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs. Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11) Ipc08G0021320 AT2G16780.1 Transducin family protein / WD-40 repeat family protein Encodes a WD-40 repeat protein similar to yeast MSI1. Transducin family protein / WD-40 repeat family protein;(source:Araport11) Ipc08G0021330 AT4G38580.2 0 putative farnesylated protein (At4g38580) mRNA, complete farnesylated protein 6;(source:Araport11) Ipc08G0021340 AT1G20140.1 SKP1-like 4 0 SKP1-like 4;(source:Araport11) Ipc08G0021350 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0021360 AT5G47900.9 0 0 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11) Ipc08G0021370 AT2G17010.1 Mechanosensitive ion channel family protein MSL8 encodes a protein with similarity to mechano-sensitive channel proteins. MSL8 is expressed specifically in pollen and germinating pollen tubes.It regulates pollen germination and is needed to maintain cellular integrity during pollen hydration and germination. Mechanosensitive ion channel family protein;(source:Araport11) Ipc08G0021380 AT4G38470.2 0 0 ACT-like protein tyrosine kinase family protein;(source:Araport11) Ipc08G0021390 AT2G17020.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc08G0021400 AT1G47670.1 Transmembrane amino acid transporter family protein 0 Transmembrane amino acid transporter family protein;(source:Araport11) Ipc08G0021410 AT5G22800.2 0 A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. Alanyl-tRNA synthetase, class IIc;(source:Araport11) Ipc08G0021420 AT4G35240.4 0 0 DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632);(source:Araport11) Ipc08G0021430 AT4G38190.1 cellulose synthase like D4 encodes a gene similar to cellulose synthase cellulose synthase like D4;(source:Araport11) Ipc07G0000570 AT1G47350.1 F-box associated ubiquitination effector family protein 0 F-box associated ubiquitination effector family protein;(source:Araport11) Ipc15G0020090 AT1G43760.1 DNAse I-like superfamily protein 0 DNAse I-like superfamily protein;(source:Araport11) Ipc12G0000010 AT2G36695.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0020080 AT3G24255.5 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc15G0020070 AT2G02498.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0020060 AT2G44500.2 O-fucosyltransferase family protein 0 O-fucosyltransferase family protein;(source:Araport11) Ipc15G0020050 AT5G42850.2 Thioredoxin superfamily protein 0 Thioredoxin superfamily protein;(source:Araport11) Ipc15G0020040 #N/A #N/A #N/A #N/A Ipc15G0020030 AT3G12680.1 floral homeotic protein (HUA1) Member of the floral homeotic AGAMOUS pathway. floral homeotic protein (HUA1);(source:Araport11) Ipc15G0020020 AT1G31360.3 0 Encodes a (d)NTP-dependent 3 Prime->5 Prime DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. RECQ helicase L2;(source:Araport11) Ipc15G0020010 AT4G35360.2 0 0 pantothenate kinase;(source:Araport11) Ipc15G0020000 AT1G12910.1 Transducin/WD40 repeat-like superfamily protein Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering. Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc15G0019990 AT3G26670.4 0 0 magnesium transporter, putative (DUF803);(source:Araport11) Ipc15G0019980 AT3G02060.3 0 0 DEAD/DEAH box helicase;(source:Araport11) Ipc15G0019970 AT3G26780.1 Phosphoglycerate mutase family protein Encodes MEF14 (mitochondrial editing factor 14), a PPR (pentatricopeptide repeat proteins) protein required for RNA editing at site matR-1895 in mitochondria. The mRNA is cell-to-cell mobile. Phosphoglycerate mutase family protein;(source:Araport11) Ipc15G0019960 AT2G31410.1 0 0 coiled-coil protein;(source:Araport11) Ipc15G0019950 AT1G08660.1 MALE GAMETOPHYTE DEFECTIVE 2 Encodes a sialyltransferase-like protein that is localized to the Golgi apparatus and is involved in pollen tube growth and pollen germination. MALE GAMETOPHYTE DEFECTIVE 2;(source:Araport11) Ipc15G0019940 AT1G08660.2 MALE GAMETOPHYTE DEFECTIVE 2 Encodes a sialyltransferase-like protein that is localized to the Golgi apparatus and is involved in pollen tube growth and pollen germination. MALE GAMETOPHYTE DEFECTIVE 2;(source:Araport11) Ipc15G0019930 AT5G13970.1 0 0 midasin-like protein;(source:Araport11) Ipc15G0019920 AT5G13960.1 SU(VAR)3-9 homolog 4 Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres. histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein;(source:Araport11) Ipc15G0019910 ATCG00380.1 chloroplast ribosomal protein S4 Chloroplast encoded ribosomal protein S4 chloroplast ribosomal protein S4;(source:Araport11) Ipc15G0019900 AT3G19340.1 Protein of unknown function (DUF3754) 0 aminopeptidase (DUF3754);(source:Araport11) Ipc15G0019890 AT3G26700.3 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0019880 AT1G54350.1 ABC transporter family protein 0 ABC transporter family protein;(source:Araport11) Ipc15G0019870 AT5G14040.1 phosphate transporter 3;1 Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress. phosphate transporter 3;(source:Araport11) Ipc15G0019860 AT2G21070.3 methyltransferases This gene is predicted to an encode a nuclear-localized protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering. methyltransferase;(source:Araport11) Ipc15G0019850 AT2G34620.1 Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family member. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc15G0019840 AT2G33520.1 0 0 cysteine-rich/transmembrane domain protein A;(source:Araport11) Ipc15G0019830 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc15G0019820 AT5G14030.4 translocon-associated protein beta (TRAPB) family protein 0 translocon-associated protein beta (TRAPB) family protein;(source:Araport11) Ipc15G0019810 AT5G41120.3 0 0 Esterase/lipase/thioesterase family protein;(source:Araport11) Ipc15G0019800 AT5G41110.2 0 0 meiosis chromosome segregation family protein;(source:Araport11) Ipc15G0019790 AT2G33490.3 0 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc15G0019780 AT3G02040.1 senescence-related gene 3 Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation. The mRNA is cell-to-cell mobile. senescence-related gene 3;(source:Araport11) Ipc15G0019770 AT3G26935.1 DHHC-type zinc finger family protein 0 DHHC-type zinc finger family protein;(source:Araport11) Ipc15G0019760 AT5G13990.1 exocyst subunit exo70 family protein C2 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. This particular member is expressed in pollen and is involved in pollen tube elongation. Found in the cytoplasm and surprisingly, not found in the plasma membrane and is not found to colocalize with or interact with core exocyst subunits. exocyst subunit exo70 family protein C2;(source:Araport11) Ipc15G0019750 AT5G11760.1 0 0 stress response protein;(source:Araport11) Ipc15G0019740 AT2G16660.2 0 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0019730 AT3G26990.2 0 0 ENTH/VHS family protein;(source:Araport11) Ipc15G0019720 AT2G40780.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0019710 AT3G26980.1 membrane-anchored ubiquitin-fold protein 4 precursor 0 membrane-anchored ubiquitin-fold protein 4 precursor;(source:Araport11) Ipc15G0019700 AT1G66350.1 RGA-like 1 Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. RGA-like 1;(source:Araport11) Ipc15G0019690 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0019680 AT5G41050.1 Pollen Ole e 1 allergen and extensin family protein 0 Pollen Ole e 1 allergen and extensin family protein;(source:Araport11) Ipc15G0019670 AT3G27000.1 actin related protein 2 encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. its transcript level is down regulated by light and is expressed in very low levels in all organs examined. actin related protein 2;(source:Araport11) Ipc15G0019660 AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11) Ipc15G0019650 AT5G14090.1 0 LAZY1 is required for gravitropic response. Mutants have abnormal shoot angles and abnormal root gravitropism. LZY1 affects the redistribution of auxin in response to gravity in shoots and roots via an unknown mechanism. regulator of nonsense transcript protein;(source:Araport11) Ipc15G0019640 AT3G01960.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0019630 AT3G01960.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0019620 AT4G00980.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc15G0019610 AT3G48660.1 Protein of unknown function (DUF 3339) 0 transmembrane protein, putative (DUF 3339);(source:Araport11) Ipc15G0019600 AT3G27027.1 Protein of unknown function (DUF 3339) 0 GPI-anchored-like protein (DUF 3339);(source:Araport11) Ipc15G0019590 AT1G27970.1 nuclear transport factor 2B Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport. The mRNA is cell-to-cell mobile. nuclear transport factor 2B;(source:Araport11) Ipc15G0019580 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc15G0019570 AT3G01930.2 Major facilitator superfamily protein 0 Major facilitator superfamily protein;(source:Araport11) Ipc15G0019560 AT5G40950.1 ribosomal protein large subunit 27 0 ribosomal protein large subunit 27;(source:Araport11) Ipc15G0019550 AT3G27060.1 Ferritin/ribonucleotide reductase-like family protein Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development. Ferritin/ribonucleotide reductase-like family protein;(source:Araport11) Ipc15G0019540 AT5G52115.1 0 0 ribonuclease H superfamily polynucleotidyl transferase;(source:Araport11) Ipc15G0019530 AT3G27080.1 translocase of outer membrane 20 kDa subunit 3 Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins translocase of outer membrane 20 kDa subunit 3;(source:Araport11) Ipc15G0019520 AT1G21400.3 0 0 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein;(source:Araport11) Ipc15G0019510 AT3G27090.3 0 0 DCD (Development and Cell Death) domain protein;(source:Araport11) Ipc15G0019500 AT3G27100.1 0 ENY2 is a component of the deubiquitination module of the SAGA complex and is involved in the deubiquitination of histone 2B . transcription/mRNA export factor;(source:Araport11) Ipc15G0019490 AT3G27120.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein Encodes a conserved AAA-ATPase that acts as a negative regulator of meiotic CO formation. P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0019480 AT3G27160.1 Ribosomal protein S21 family protein GHS1 encodes plastid ribosomal protein S21 The mRNA is cell-to-cell mobile. Ribosomal protein S21 family protein;(source:Araport11) Ipc15G0019470 AT4G14370.1 Disease resistance protein (TIR-NBS-LRR class) family 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0019460 AT3G27170.1 chloride channel B member of Anion channel protein family The mRNA is cell-to-cell mobile. chloride channel B;(source:Araport11) Ipc15G0019450 AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1 Encodes a protein that with uridine kinase but not uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1;(source:Araport11) Ipc15G0019440 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0019430 AT3G01860.1 0 0 hypothetical protein;(source:Araport11) Ipc15G0019420 AT5G61000.1 Replication factor-A protein 1-related 0 Replication factor-A protein 1-like protein;(source:Araport11) Ipc15G0019410 AT3G01810.3 0 0 EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11) Ipc15G0019400 AT5G14210.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc15G0019390 AT5G14220.1 Flavin containing amine oxidoreductase family Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development. Flavin containing amine oxidoreductase family;(source:Araport11) Ipc15G0019380 AT1G68020.3 0 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme. UDP-Glycosyltransferase / trehalose-phosphatase family protein;(source:Araport11) Ipc15G0019370 AT5G14230.1 0 0 ankyrin;(source:Araport11) Ipc15G0019360 AT4G14605.2 0 Encodes a putative mitochondrial transcription termination factor whose mutation results in plants that exhibit altered chloroplast morphology and plant growth, and reduced pigmentation of cotyledons, leaves, stems and sepals. Mitochondrial transcription termination factor family protein;(source:Araport11) Ipc15G0019350 AT5G58770.1 Undecaprenyl pyrophosphate synthetase family protein AtCPT7 synthesizes medium-chain polyprenols of approximately 55 carbons in length. The enzyme utlizes geranylgeranyl pyrophosphate (GGPP) and isopentenyl pyrophosphate (IPP) as substrates. The enzymatic product accumulates into plastdial membranes (DOI:10.1105/tpc.16.00796). Undecaprenyl pyrophosphate synthetase family protein;(source:Araport11) Ipc15G0019340 AT3G15353.1 metallothionein 3 metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage metallothionein 3;(source:Araport11) Ipc15G0019330 AT5G53770.1 Nucleotidyltransferase family protein 0 Nucleotidyltransferase family protein;(source:Araport11) Ipc15G0019320 AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc15G0019310 AT1G67020.1 0 0 transmembrane protein;(source:Araport11) Ipc15G0019300 AT3G15360.1 thioredoxin M-type 4 encodes a prokaryotic thioredoxin The mRNA is cell-to-cell mobile. thioredoxin M-type 4;(source:Araport11) Ipc15G0019290 AT4G27470.1 RING membrane-anchor 3 Encodes a RING finger E3 ubiquitin ligase. RING membrane-anchor 3;(source:Araport11) Ipc15G0019280 AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0019270 AT1G18350.1 MAP kinase kinase 7 MAP kinase kinase7. Member of plant mitogen-activated protein kinase kinase group D. Negative regulator of polar auxin transport. Overexpression leads to activation of basal and systemic acquired resistance. MAP kinase kinase 7;(source:Araport11) Ipc15G0019260 AT1G67060.1 0 0 peptidase M50B-like protein;(source:Araport11) Ipc15G0019250 AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding 0 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein;(source:Araport11) Ipc15G0019240 AT3G26000.1 Ribonuclease inhibitor RIPF1 is an F-Box E3 ligase that interacts with the ABA receptor RCAR3 and appears to be responsible for facilitating its turnover. Ribonuclease inhibitor;(source:Araport11) Ipc15G0019230 AT5G50960.1 nucleotide binding protein 35 Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal. nucleotide binding protein 35;(source:Araport11) Ipc15G0019220 AT5G58760.1 damaged DNA binding 2 Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity. damaged DNA binding 2;(source:Araport11) Ipc15G0019210 AT5G58750.2 0 Putative PRISE (progesterone 5β-reductase and/or iridoid synthase-like 1,4-enone reductases). NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc15G0019200 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc15G0019190 AT1G13440.1 glyceraldehyde-3-phosphate dehydrogenase C2 The expression level of GAPC-2 is upregulated in Arabidopsis seedlings exposed to cadmium. glyceraldehyde-3-phosphate dehydrogenase C2;(source:Araport11) Ipc15G0019180 AT5G40780.1 lysine histidine transporter 1 Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. lysine histidine transporter 1;(source:Araport11) Ipc15G0019170 AT3G27260.4 0 Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain global transcription factor group E8;(source:Araport11) Ipc15G0019160 AT1G51540.1 Galactose oxidase/kelch repeat superfamily protein 0 Galactose oxidase/kelch repeat superfamily protein;(source:Araport11) Ipc15G0019150 AT3G01790.2 Ribosomal protein L13 family protein 0 Ribosomal protein L13 family protein;(source:Araport11) Ipc15G0019140 AT5G40810.1 Cytochrome C1 family 0 Cytochrome C1 family;(source:Araport11) Ipc15G0019130 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc15G0019120 AT5G46270.3 0 0 Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11) Ipc15G0019110 AT1G53050.2 0 0 Protein kinase superfamily protein;(source:Araport11) Ipc15G0019100 AT4G27480.3 0 0 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11) Ipc15G0019090 AT1G28280.2 VQ motif-containing protein 0 VQ motif-containing protein;(source:Araport11) Ipc15G0019080 AT5G53850.2 haloacid dehalogenase-like hydrolase family protein Encodes a trifunctional dehydratase / enolase / phosphatase involved in the methionine salvage. haloacid dehalogenase-like hydrolase family protein;(source:Araport11) Ipc15G0019070 AT5G53870.1 early nodulin-like protein 1 0 early nodulin-like protein 1;(source:Araport11) Ipc15G0019060 AT1G10000.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0019050 AT3G24255.7 0 0 RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11) Ipc15G0019040 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc15G0019030 AT5G53890.1 phytosylfokine-alpha receptor 2 Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation. phytosylfokine-alpha receptor 2;(source:Araport11) Ipc15G0019020 AT5G18636.1 0 0 Ta11-like non-LTR retrotransposon;(source:Araport11) Ipc15G0019010 AT3G15260.2 Protein phosphatase 2C family protein 0 Protein phosphatase 2C family protein;(source:Araport11) Ipc15G0019000 AT5G53940.1 Yippee family putative zinc-binding protein 0 Yippee family putative zinc-binding protein;(source:Araport11) Ipc15G0018990 AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0018980 AT3G15180.1 ARM repeat superfamily protein 0 ARM repeat superfamily protein;(source:Araport11) Ipc15G0018970 AT3G15150.1 RING/U-box superfamily protein Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance. RING/U-box superfamily protein;(source:Araport11) Ipc15G0018960 AT5G46030.3 0 0 transcription elongation factor-like protein;(source:Araport11) Ipc15G0018950 AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc15G0018940 AT1G72050.3 0 Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm. transcription factor IIIA;(source:Araport11) Ipc15G0018930 AT2G46100.2 Nuclear transport factor 2 (NTF2) family protein 0 Nuclear transport factor 2 (NTF2) family protein;(source:Araport11) Ipc15G0018920 AT5G61700.3 0 0 ABC2 homolog 16;(source:Araport11) Ipc15G0018910 AT3G10520.1 haemoglobin 2 Encodes a class 2 non-symbiotic hemoglobin. Over-expression of AHb2 in seeds led to a 40% increase in the total fatty acid content of developing and mature seeds in three subsequent generations. This was mainly due to an increase in the poly-unsaturated C18:2 (omega-6) linoleic and C18:3 (omega-3) alpha-linolenic acids. hemoglobin 2;(source:Araport11) Ipc15G0018900 AT2G17350.1 0 0 beta-mannosyltransferase-like protein;(source:Araport11) Ipc15G0018890 AT3G58580.1 DNAse I-like superfamily protein Encodes a protein that is involved in mRNA processing and localized to cytoplasmic p-bodies. Double mutants with CCR4a show decreased sensitivity to high concentrations of sucrose. Involved in starch and sucrose metabolism. DNAse I-like superfamily protein;(source:Araport11) Ipc15G0018880 AT1G53190.2 RING/U-box superfamily protein Encodes a RING-type E3 ligase that positively regulates CIN-like TCP activity to promote leaf development by mediating the degradation of the TCP repressor TIE1. RING/U-box superfamily protein;(source:Araport11) Ipc15G0018870 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc15G0018860 AT5G60860.1 RAB GTPase homolog A1F 0 RAB GTPase homolog A1F;(source:Araport11) Ipc15G0018850 AT1G16920.1 RAB GTPase homolog A1B small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking. RAB GTPase homolog A1B;(source:Araport11) Ipc15G0018840 AT5G45750.1 RAB GTPase homolog A1C 0 RAB GTPase homolog A1C;(source:Araport11) Ipc15G0018830 AT1G77660.1 Histone H3 K4-specific methyltransferase SET7/9 family protein 0 Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11) Ipc15G0018820 AT1G52950.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc15G0018810 AT1G77110.2 0 Rate-limiting factor in saturable efflux of auxins. PINs are directly involved of in catalyzing cellular auxin efflux. Auxin efflux carrier family protein;(source:Araport11) Ipc15G0018800 AT5G54080.2 homogentisate 1,2-dioxygenase Encodes a homogentisate 1,2-dioxygenase that can convert homogentisate to malylacetoacetate and is likely to be involved in tyrosine catabolism. homogentisate 1,2-dioxygenase;(source:Araport11) Ipc15G0018790 AT1G68000.1 phosphatidylinositol synthase 1 phosphatidylinositol synthase 1 phosphatidylinositol synthase 1;(source:Araport11) Ipc15G0018780 AT5G09950.2 0 Encodes a DYW-class PPR protein required for RNA editing at four sites in mitochondria of A. thaliana. Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc15G0018770 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc15G0018760 AT1G12420.2 0 0 ACT domain repeat 8;(source:Araport11) Ipc15G0018750 AT1G53210.1 sodium/calcium exchanger family protein / calcium-binding EF hand family protein Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile. sodium/calcium exchanger family protein / calcium-binding EF hand family protein;(source:Araport11) Ipc15G0018740 AT2G34010.1 0 0 verprolin;(source:Araport11) Ipc15G0018730 AT3G15050.1 IQ-domain 10 0 IQ-domain 10;(source:Araport11) Ipc15G0018720 AT1G53230.2 0 Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3;(source:Araport11) Ipc15G0018710 AT1G73170.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc15G0018700 AT2G47210.3 0 0 myb-like transcription factor family protein;(source:Araport11) Ipc15G0018690 AT5G05800.5 0 0 Myb/SANT-like DNA-binding domain protein;(source:Araport11) Ipc15G0018680 AT1G53270.1 ABC-2 type transporter family protein 0 ABC-2 type transporter family protein;(source:Araport11) Ipc15G0018670 AT1G16670.1 Protein kinase superfamily protein Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress. Protein kinase superfamily protein;(source:Araport11) Ipc15G0018660 AT3G14980.3 0 IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11) Ipc15G0018650 AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1 Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile. tetratricopetide-repeat thioredoxin-like 1;(source:Araport11) Ipc15G0018640 AT1G78870.2 ubiquitin-conjugating enzyme 35 UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. The mRNA is cell-to-cell mobile. ubiquitin-conjugating enzyme 35;(source:Araport11) Ipc15G0018630 AT3G14940.2 0 Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC.The mRNA is cell-to-cell mobile. phosphoenolpyruvate carboxylase 3;(source:Araport11) Ipc15G0018620 AT1G78860.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain curculin-like (mannose-binding) lectin family protein, low similarity to Ser/Thr protein kinase (Zea mays) GI:2598067; contains Pfam profile PF01453: Lectin (probable mannose binding) but not the protein kinase domain of the Z. mays protein D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein;(source:Araport11) Ipc07G0005540 AT2G25840.2 Nucleotidylyl transferase superfamily protein 0 Nucleotidylyl transferase superfamily protein;(source:Araport11) Ipc07G0005550 AT2G25740.1 ATP-dependent protease La (LON) domain protein 0 ATP-dependent protease La (LON) domain protein;(source:Araport11) Ipc07G0005560 AT5G25880.1 NADP-malic enzyme 3 The malic enzyme (EC 1.1.1.40) encoded by the ATNADP-ME3 is presumably cytosolic and restricted in its expression by both developmental and cell-specific signals. NADP-malic enzyme 3;(source:Araport11) Ipc07G0005570 AT4G18440.1 L-Aspartase-like family protein 0 L-Aspartase-like family protein;(source:Araport11) Ipc07G0005580 AT2G25770.2 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc07G0005590 AT4G32870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0 Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11) Ipc07G0005600 AT5G11650.1 alpha/beta-Hydrolases superfamily protein 0 alpha/beta-Hydrolases superfamily protein;(source:Araport11) Ipc07G0005610 AT1G03940.1 HXXXD-type acyl-transferase family protein 0 HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc07G0005620 AT3G29090.1 pectin methylesterase 31 Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification. pectin methylesterase 31;(source:Araport11) Ipc07G0005630 AT3G29090.1 pectin methylesterase 31 Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification. pectin methylesterase 31;(source:Araport11) Ipc07G0005640 AT5G25840.1 Protein of unknown function (DUF1677) 0 DUF1677 family protein (DUF1677);(source:Araport11) Ipc07G0005650 AT5G25830.1 GATA transcription factor 12 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 12;(source:Araport11) Ipc07G0005660 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc07G0005670 AT1G71400.1 receptor like protein 12 Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter. The mRNA is cell-to-cell mobile. receptor like protein 12;(source:Araport11) Ipc07G0005680 AT4G13810.1 receptor like protein 47 0 receptor like protein 47;(source:Araport11) Ipc07G0005690 AT2G33060.1 receptor like protein 27 0 receptor like protein 27;(source:Araport11) Ipc07G0005700 AT5G49610.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc07G0005710 #N/A #N/A #N/A #N/A Ipc07G0005720 AT4G33080.2 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 0 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11) Ipc07G0005730 AT4G08900.1 arginase Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen. arginase;(source:Araport11) Ipc07G0005740 AT3G11010.1 receptor like protein 34 0 receptor like protein 34;(source:Araport11) Ipc07G0005750 AT3G11010.1 receptor like protein 34 0 receptor like protein 34;(source:Araport11) Ipc07G0005760 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc07G0005770 AT2G45280.1 RAS associated with diabetes protein 51C Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions. RAS associated with diabetes protein 51C;(source:Araport11) Ipc07G0005780 AT2G45280.1 RAS associated with diabetes protein 51C Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions. RAS associated with diabetes protein 51C;(source:Araport11) Ipc07G0005790 AT2G45270.1 glycoprotease 1 Mitochondrial protein essential for embryo development. glycoprotease 1;(source:Araport11) Ipc07G0005800 AT1G32450.1 nitrate transporter 1.5 Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem. nitrate transporter 1.5;(source:Araport11) Ipc07G0005810 AT4G20140.1 Leucine-rich repeat transmembrane protein kinase Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain. Leucine-rich repeat transmembrane protein kinase;(source:Araport11) Ipc07G0005820 AT5G25910.1 receptor like protein 52 putative disease resistance protein induced by chitin oligomers. receptor like protein 52;(source:Araport11) Ipc07G0005830 AT3G11010.2 0 0 receptor like protein 34;(source:Araport11) Ipc07G0005850 AT3G11010.1 receptor like protein 34 0 receptor like protein 34;(source:Araport11) Ipc07G0005870 AT2G32660.1 receptor like protein 22 0 receptor like protein 22;(source:Araport11) Ipc07G0005880 AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated. Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11) Ipc07G0005840 AT3G11010.2 0 0 receptor like protein 34;(source:Araport11) Ipc07G0005860 AT4G13810.1 receptor like protein 47 0 receptor like protein 47;(source:Araport11) Ipc07G0005890 AT2G15080.2 receptor like protein 19 0 receptor like protein 19;(source:Araport11) Ipc07G0005900 AT5G08610.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc07G0005910 AT4G32900.2 Peptidyl-tRNA hydrolase II (PTH2) family protein 0 Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11) Ipc07G0005920 AT5G11620.2 0 0 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein;(source:Araport11) Ipc07G0005930 AT4G32910.1 0 SBB1 is a putative nucleoporin that is localized to the nuclear envelope. SBB1 was identified in a screen for supressors of BAK1, BKK1 mediated cell death. nuclear pore complex Nup85-like protein;(source:Araport11) Ipc07G0005940 AT1G16650.2 0 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc07G0005950 AT2G25830.1 YebC-related 0 YebC-like protein;(source:Araport11) Ipc07G0005960 AT5G11590.1 Integrase-type DNA-binding superfamily protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Integrase-type DNA-binding superfamily protein;(source:Araport11) Ipc07G0005970 AT5G11600.2 0 0 hypothetical protein;(source:Araport11) Ipc07G0005980 AT5G25820.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc07G0005990 AT4G32790.3 0 0 Exostosin family protein;(source:Araport11) Ipc07G0006000 AT3G46210.7 0 0 Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11) Ipc07G0006010 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc07G0006020 AT3G63520.1 carotenoid cleavage dioxygenase 1 Encodes a protein with 9-cis-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including β-carotene, lutein, zeaxanthin, and all-trans-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-cis-double or allenic bonds. The mRNA is cell-to-cell mobile. carotenoid cleavage dioxygenase 1;(source:Araport11) Ipc07G0006030 AT1G52190.1 Major facilitator superfamily protein Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves. Major facilitator superfamily protein;(source:Araport11) Ipc07G0006040 AT4G28940.1 Phosphorylase superfamily protein 0 Phosphorylase superfamily protein;(source:Araport11) Ipc07G0006050 AT4G32770.1 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading. tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1);(source:Araport11) Ipc07G0006060 AT1G27600.2 Nucleotide-diphospho-sugar transferases superfamily protein Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9. Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11) Ipc07G0006070 AT2G46200.2 0 0 U11/U12 small nuclear ribonucleoprotein;(source:Araport11) Ipc07G0006080 AT5G11540.1 D-arabinono-1,4-lactone oxidase family protein Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid. D-arabinono-1,4-lactone oxidase family protein;(source:Araport11) Ipc09G0010280 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010270 AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit 0 Ubiquinol-cytochrome C reductase iron-sulfur subunit;(source:Araport11) Ipc09G0010260 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0010250 AT5G13220.1 jasmonate-zim-domain protein 10 Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa. jasmonate-zim-domain protein 10;(source:Araport11) Ipc09G0010240 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc09G0010230 AT5G36240.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0010200 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010220 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc09G0010210 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010190 AT1G21280.1 0 0 Copia-like polyprotein/retrotransposon;(source:Araport11) Ipc09G0010180 AT1G76620.1 Protein of unknown function, DUF547 0 Serine/Threonine-kinase, putative (Protein of unknown function, DUF547);(source:Araport11) Ipc09G0010170 AT3G01800.1 Ribosome recycling factor 0 Ribosome recycling factor;(source:Araport11) Ipc09G0010160 AT5G13200.1 GRAM domain family protein Encodes a protein with unknown function that is involved in hormone mediated regulation of seed germination/dormancy. GRAM domain family protein;(source:Araport11) Ipc09G0010150 AT3G53810.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc09G0010140 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010130 AT1G51570.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region. Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11) Ipc09G0010120 #N/A #N/A #N/A #N/A Ipc09G0010110 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc09G0010100 AT5G60310.1 Concanavalin A-like lectin protein kinase family protein 0 Concanavalin A-like lectin protein kinase family protein;(source:Araport11) Ipc09G0010090 AT3G43590.1 zinc knuckle (CCHC-type) family protein 0 zinc knuckle (CCHC-type) family protein;(source:Araport11) Ipc09G0010080 AT4G07350.1 0 0 hypothetical protein;(source:Araport11) Ipc09G0010070 AT5G13150.1 exocyst subunit exo70 family protein C1 A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. This particular member is expressed in pollen and, together with EXO70C2, is involved in pollen tube elongation. Found in the cytoplasm and surprisingly, not found in the plasma membrane. exocyst subunit exo70 family protein C1;(source:Araport11) Ipc13G0016170 AT2G25050.1 Actin-binding FH2 (Formin Homology) protein 0 actin-binding FH2 (formin 2) family protein;(source:Araport11) Ipc09G0010060 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc09G0010050 AT5G04180.1 alpha carbonic anhydrase 3 0 alpha carbonic anhydrase 3;(source:Araport11) Ipc09G0010040 AT5G66790.1 Protein kinase superfamily protein 0 Protein kinase superfamily protein;(source:Araport11) Ipc09G0010030 AT1G42190.1 GAG/POL/ENV polyprotein 0 GAG/POL/ENV polyprotein;(source:Araport11) Ipc09G0010020 AT2G31440.2 0 Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments. gamma-secretase subunit APH1-like protein;(source:Araport11) Ipc09G0010010 AT2G02220.1 phytosulfokin receptor 1 Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). Contains dual guanylate cyclase and kinase catalytic activities that operate in vivo. phytosulfokin receptor 1;(source:Araport11) Ipc09G0010000 AT1G75370.2 Sec14p-like phosphatidylinositol transfer family protein 0 Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11) Ipc10G0016970 AT1G75640.1 Leucine-rich receptor-like protein kinase family protein Encodes a Leucine-Rich Repeat Receptor-Like Kinase MUSTACHES (MUS). Regulates stomatal bilateral symmetry. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc10G0016960 AT5G59940.1 Cysteine/Histidine-rich C1 domain family protein 0 Cysteine/Histidine-rich C1 domain family protein;(source:Araport11) Ipc10G0016950 AT5G58380.1 SOS3-interacting protein 1 Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1;(source:Araport11) Ipc10G0016940 AT2G30350.2 Excinuclease ABC, C subunit, N-terminal 0 Excinuclease ABC, C subunit, N-terminal;(source:Araport11) Ipc10G0016930 AT2G05642.1 Nucleic acid-binding, OB-fold-like protein 0 Nucleic acid-binding, OB-fold-like protein;(source:Araport11) Ipc10G0017250 AT1G60680.1 NAD(P)-linked oxidoreductase superfamily protein 0 NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11) Ipc10G0017230 AT2G30370.3 0 Encodes a small, potentially secreted protein that acts as an inhibitor of stomatal production though likely not through direct interaction with the TMM receptor. It is homologous to known stomatal regulators EPF1 and EPF2. allergen-like protein;(source:Araport11) Ipc10G0016920 AT5G01840.1 ovate family protein 1 Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. ovate family protein 1;(source:Araport11) Ipc10G0016910 AT1G16520.1 0 NAI1 interacting protein, involved in ER body and vesicle formation. interactor of constitutive active ROPs protein;(source:Araport11) Ipc10G0017180 AT5G58350.1 with no lysine (K) kinase 4 Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. with no lysine (K) kinase 4;(source:Araport11) Ipc10G0016900 AT5G17690.2 0 Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state. like heterochromatin protein (LHP1);(source:Araport11) Ipc10G0016890 AT3G51620.2 PAP/OAS1 substrate-binding domain superfamily 0 PAP/OAS1 substrate-binding domain superfamily;(source:Araport11) Ipc10G0016870 AT5G24280.1 gamma-irradiation and mitomycin c induced 1 Encodes GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein. Involved in somatic homologous recombination. gamma-irradiation and mitomycin c induced 1;(source:Araport11) Ipc10G0016860 AT1G06890.2 nodulin MtN21 /EamA-like transporter family protein UXT3 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter. nodulin MtN21 /EamA-like transporter family protein;(source:Araport11) Ipc10G0016840 AT1G06900.1 Insulinase (Peptidase family M16) family protein 0 Insulinase (Peptidase family M16) family protein;(source:Araport11) Ipc10G0016830 AT5G67210.1 Protein of unknown function (DUF579) Encode a DUF579 (domain of unknown function 579) containing protein essential for normal xylan synthesis and deposition in the secondary cell wall. IRREGULAR XYLEM protein (DUF579);(source:Araport11) Ipc10G0016820 AT5G58340.2 myb-like HTH transcriptional regulator family protein 0 myb-like HTH transcriptional regulator family protein;(source:Araport11) Ipc10G0017120 AT1G31930.6 0 Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses. extra-large GTP-binding protein 3;(source:Araport11) Ipc10G0016810 AT2G30470.1 high-level expression of sugar-inducible gene 2 HSI2 is a member of the ABI3 family of B3 domain proteins and functions as an active repressor of the Spo minimal promoter through the EAR motif. It contains a plant-specific B3 DNA-binding domain. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50µM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain. HSI2 is also an epigenetic repressor as it also contains functional plant homeodomain-like (PHD-L) and zinc-finger Cys- and Trp-containing (CW) domains associated with epigenetic regulation. The PHD-L domain of HSI2 is connected to promoting trimethylation of Lys-27 on histone 3 (H3K27me3), while the CW domain can bind directly to H3K4me3. Through these domains, HSI2 represses the seed maturation program during seed germination by repressing transcription of the core LAFL (LEC1, ABI3, FUS3, and LEC2) seed developmental transcriptional regulators. In developing A. thaliana embryos, HSI2 suppresses expression of a large number of genes, many identified as targets of FUS3. However, the absence of HSI2 had no effect on transcript levels of the LAFL regulators and the levels of measured metabolites and phytohormones (ABA, auxin, and JA derivatives) in developing Arabidopsis embryos. HSI2 likely fine-tunes seed maturation by repressing genes involved in early embryogenesis that are not required later for seed maturation and desiccation. B3 domain-containing transcription repressor VAL1;(source:Araport11) Ipc10G0016800 AT2G30490.1 cinnamate-4-hydroxylase Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development. cinnamate-4-hydroxylase;(source:Araport11) Ipc10G0016780 AT5G37360.1 0 0 LOW protein: ammonium transporter 1-like protein;(source:Araport11) Ipc10G0016760 AT1G56320.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0017090 AT1G64230.2 ubiquitin-conjugating enzyme 28 0 ubiquitin-conjugating enzyme 28;(source:Araport11) Ipc10G0016740 AT5G58300.3 0 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0016730 AT1G11200.1 Protein of unknown function (DUF300) 0 organic solute transporter ostalpha protein (DUF300);(source:Araport11) Ipc10G0016720 AT2G45680.1 TCP family transcription factor 0 TCP family transcription factor;(source:Araport11) Ipc10G0016710 AT5G58290.1 regulatory particle triple-A ATPase 3 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, regulatory particle triple-A ATPase 3;(source:Araport11) Ipc10G0016690 AT1G52603.1 0 0 GRF zinc finger protein;(source:Araport11) Ipc10G0017010 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0016680 AT1G06840.1 Leucine-rich repeat protein kinase family protein 0 Leucine-rich repeat protein kinase family protein;(source:Araport11) Ipc10G0016670 AT3G10860.2 0 0 Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11) Ipc10G0016660 AT1G52990.2 0 0 thioredoxin family protein;(source:Araport11) Ipc10G0016650 AT1G75660.1 5'-3' exoribonuclease 3 Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products. 5-3 exoribonuclease 3;(source:Araport11) Ipc10G0016640 AT1G13570.2 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016630 AT5G45150.1 RNAse THREE-like protein 3 0 RNAse THREE-like protein 3;(source:Araport11) Ipc10G0016620 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016610 AT3G58860.1 F-box/RNI-like superfamily protein 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016600 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016590 AT2G42730.1 F-box family protein 0 F-box/FBD/LRR protein;(source:Araport11) Ipc10G0016580 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016570 AT3G51960.2 basic leucine zipper 24 bZIP transcription factor induced by salt stress and promoted salt tolerance. Localized to the cytoplasm and nucleus under control conditions and targeted preferentially to the nucleus under salt stress basic leucine zipper 24;(source:Araport11) Ipc10G0016560 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016550 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016540 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016530 AT1G80170.1 Pectin lyase-like superfamily protein 0 Pectin lyase-like superfamily protein;(source:Araport11) Ipc10G0016520 AT2G41370.1 Ankyrin repeat family protein / BTB/POZ domain-containing protein Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. BOP2 is expressed in valve margin. Misexpression in stems causes short internodes and ectopic biosynthesis of lignin. BOP2 activity is antagonistic to BP (At4g08150) and PNY (At5g02030). BOP3 expression is restricted to pedicel axils by BP and PNY. BOP2 promotes KNAT6 (At1g23380) expression. Ankyrin repeat family protein / BTB/POZ domain-containing protein;(source:Araport11) Ipc10G0016510 AT5G39850.1 Ribosomal protein S4 0 Ribosomal protein S4;(source:Araport11) Ipc10G0016500 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016490 AT2G38610.2 RNA-binding KH domain-containing protein 0 RNA-binding KH domain-containing protein;(source:Araport11) Ipc10G0016480 AT5G58960.1 Plant protein of unknown function (DUF641) Mutant plants display impaired light-regulation of the hypocotyl randomization response. glucose-6-phosphate isomerase, putative (DUF641);(source:Araport11) Ipc10G0016470 AT2G29570.1 proliferating cell nuclear antigen 2 Functionally interacts with POLH to repair DNA damaged by UVB damage. May be sumoylated. proliferating cell nuclear antigen 2;(source:Araport11) Ipc10G0016460 AT2G29560.1 cytosolic enolase Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm. The mRNA is cell-to-cell mobile. cytosolic enolase;(source:Araport11) Ipc10G0016450 #N/A #N/A #N/A #N/A Ipc10G0016440 AT1G17840.1 white-brown complex homolog protein 11 Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile. white-brown complex-like protein;(source:Araport11) Ipc10G0016430 AT5G59020.1 Protein of unknown function (DUF3527) 0 hepatocyte growth factor activator, putative (DUF3527);(source:Araport11) Ipc10G0016420 AT5G08020.1 RPA70-kDa subunit B Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair. The mRNA is cell-to-cell mobile. RPA70-kDa subunit B;(source:Araport11) Ipc10G0016410 AT1G13570.3 0 0 F-box/RNI-like superfamily protein;(source:Araport11) Ipc10G0016400 AT2G29040.1 Exostosin family protein 0 Exostosin family protein;(source:Araport11) Ipc10G0016390 AT5G59410.1 Rab5-interacting family protein 0 Rab5-interacting family protein;(source:Araport11) Ipc10G0016380 AT5G59420.1 OSBP(oxysterol binding protein)-related protein 3C 0 OSBP(oxysterol binding protein)-related protein 3C;(source:Araport11) Ipc10G0016370 AT1G07540.1 TRF-like 2 Arabidopsis thaliana telomere-binding protein, putative (At1g07540) TRF-like 2;(source:Araport11) Ipc10G0016360 #N/A #N/A #N/A #N/A Ipc10G0016350 AT2G41960.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016340 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc10G0016330 AT5G59450.1 GRAS family transcription factor 0 GRAS family transcription factor;(source:Araport11) Ipc10G0016320 AT5G59480.5 0 0 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11) Ipc10G0016310 AT1G06740.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc10G0016300 AT5G33393.1 0 0 hypothetical protein;(source:Araport11) Ipc10G0016290 AT2G29090.2 cytochrome P450, family 707, subfamily A, polypeptide 2 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition. cytochrome P450, family 707, subfamily A, polypeptide 2;(source:Araport11) Ipc10G0016280 AT4G23160.3 0 Encodes a cysteine-rich receptor-like protein kinase. cysteine-rich RECEPTOR-like kinase;(source:Araport11) Ipc08G0003120 AT1G29400.3 0 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices. MEI2-like protein 5;(source:Araport11) Ipc08G0003130 AT4G18130.1 phytochrome E member of Histidine Kinase phytochrome E;(source:Araport11) Ipc08G0003140 AT4G18140.6 0 Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 4b;(source:Araport11) Ipc08G0003150 AT1G29790.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 0 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11) Ipc08G0003160 AT2G01050.1 zinc ion binding;nucleic acid binding 0 zinc ion binding / nucleic acid binding protein;(source:Araport11) Ipc08G0003170 AT1G09230.2 0 Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development. RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11) Ipc08G0003180 AT4G18170.1 WRKY DNA-binding protein 28 Member of WRKY Transcription Factor; Group II-c. Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3. In the ovule, it is expressed in hypodermal somatic cells and appears to play a role in supression of megasporocyte cell fate. WRKY DNA-binding protein 28;(source:Araport11) Ipc08G0003190 AT2G34410.2 O-acetyltransferase family protein Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis. O-acetyltransferase family protein;(source:Araport11) Ipc08G0003200 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0003210 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0003220 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0003230 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0003240 AT4G18220.1 Drug/metabolite transporter superfamily protein 0 Drug/metabolite transporter superfamily protein;(source:Araport11) Ipc08G0003250 AT4G18240.1 starch synthase 4 Encodes a starch synthase. In Arabidopsis leaves, the catalytic C-terminal region of STARCH SYNTHASE 4 promotes starch granule initiation while its non-catalytic N-terminal region determines starch granules morphology. starch synthase 4;(source:Araport11) Ipc08G0003260 AT1G29930.1 chlorophyll A/B binding protein 1 Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. The mRNA is cell-to-cell mobile. chlorophyll A/B binding protein 1;(source:Araport11) Ipc08G0003270 AT1G29930.1 chlorophyll A/B binding protein 1 Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. The mRNA is cell-to-cell mobile. chlorophyll A/B binding protein 1;(source:Araport11) Ipc08G0003280 AT1G29930.1 chlorophyll A/B binding protein 1 Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. The mRNA is cell-to-cell mobile. chlorophyll A/B binding protein 1;(source:Araport11) Ipc08G0003290 AT5G46330.2 0 Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.The mRNA is cell-to-cell mobile. Leucine-rich receptor-like protein kinase family protein;(source:Araport11) Ipc08G0003300 AT1G78520.1 Carbohydrate-binding X8 domain superfamily protein 0 Carbohydrate-binding X8 domain superfamily protein;(source:Araport11) Ipc08G0003310 AT1G29950.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0 basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) Ipc08G0003320 AT1G07705.1 NOT2 / NOT3 / NOT5 family 0 NOT2 / NOT3 / NOT5 family;(source:Araport11) Ipc08G0003330 AT3G19620.1 Glycosyl hydrolase family protein 0 Glycosyl hydrolase family protein;(source:Araport11) Ipc08G0003340 AT4G12790.6 0 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0003350 AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP Encodes Dim1 homolog. mRNA splicing factor, thioredoxin-like U5 snRNP;(source:Araport11) Ipc08G0003360 AT1G06475.1 0 0 transmembrane protein;(source:Araport11) Ipc08G0003370 AT2G13620.1 cation/hydrogen exchanger 15 member of Putative Na+/H+ antiporter family cation/hydrogen exchanger 15;(source:Araport11) Ipc08G0003380 #N/A #N/A #N/A #N/A Ipc08G0003390 AT3G05850.1 0 Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8). MuDR family transposase;(source:Araport11) Ipc08G0003400 #N/A #N/A #N/A #N/A Ipc08G0003410 AT2G34450.4 0 0 HMG-box (high mobility group) DNA-binding family protein;(source:Araport11) Ipc08G0003420 AT3G30770.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc08G0003430 AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein 0 Minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11) Ipc08G0003440 AT1G30480.1 D111/G-patch domain-containing protein recombination and DNA-damage resistance protein (DRT111) D111/G-patch domain-containing protein;(source:Araport11) Ipc08G0003450 AT2G34460.1 NAD(P)-binding Rossmann-fold superfamily protein 0 NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11) Ipc08G0003460 AT2G33320.1 Calcium-dependent lipid-binding (CaLB domain) family protein 0 Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11) Ipc08G0003470 AT1G74180.2 0 0 receptor like protein 14;(source:Araport11) Ipc08G0003480 AT1G74180.1 receptor like protein 14 0 receptor like protein 14;(source:Araport11) Ipc08G0003490 AT3G07870.1 F-box and associated interaction domains-containing protein FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation. F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0003500 AT4G01070.1 UDP-Glycosyltransferase superfamily protein the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta UDP-Glycosyltransferase superfamily protein;(source:Araport11) Ipc08G0003510 AT4G18270.1 translocase 11 Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development. translocase 11;(source:Araport11) Ipc08G0003520 AT5G46250.1 RNA-binding protein 0 RNA-binding protein;(source:Araport11) Ipc08G0003530 AT1G29980.1 Protein of unknown function, DUF642 0 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642);(source:Araport11) Ipc08G0003540 AT5G63470.2 nuclear factor Y, subunit C4 Encodes a member of class of transcription regulators that his highly conserved across many plant species.In Arabidopsis and rice, NF-YC4 interacts with other members of this class and CO to regulate flowering. In Arabidopsis, it interacts with QQS to regulate C/N partitioning. nuclear factor Y, subunit C4;(source:Araport11) Ipc08G0003550 AT5G25170.2 0 0 PPPDE putative thiol peptidase family protein;(source:Araport11) Ipc08G0003560 AT4G17330.2 0 gene of unknown function expressed in seedlings, flower buds and stems G2484-1 protein;(source:Araport11) Ipc08G0003570 AT4G29090.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0003580 AT5G46240.1 potassium channel in Arabidopsis thaliana 1 Encodes a potassium channel protein (KAT1). ABA triggers KAT1 endocytosis both in epidermal cells as well as guard cells. Upon removal of ABA, KAT1 is recycled back to the plasma membrane. KAT1 is localized within 0.5?0.6 μm diameter microdomains at the plasma membrane surface. KAT1 belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). 1;(source:Araport11) Ipc08G0003590 AT4G18335.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0003600 AT1G30010.1 Intron maturase, type II family protein Analysis of the RNA profiles of wild-type and mutant plants establishes a role for nMAT1 in the trans-splicing of nad1 intron 1 and in the cis-splicing of nad2 intron 1 and nad4 intron 2. Intron maturase, type II family protein;(source:Araport11) Ipc08G0003610 AT5G46230.1 Protein of unknown function, DUF538 0 hypothetical protein (Protein of unknown function, DUF538);(source:Araport11) Ipc08G0003620 AT3G11130.1 Clathrin, heavy chain CHC1 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis. Mutants also have increased dehydration tolerance which may be related to the overall slower stomatal aperture dynamics. Overall growth is affected. Clathrin, heavy chain;(source:Araport11) Ipc08G0003630 AT1G30040.1 gibberellin 2-oxidase Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. gibberellin 2-oxidase;(source:Araport11) Ipc08G0003640 AT5G45920.4 0 0 SGNH hydrolase-type esterase superfamily protein;(source:Araport11) Ipc08G0003650 AT4G13750.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein;(source:Araport11) Ipc08G0003660 AT1G78960.3 0 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. lupeol synthase 2;(source:Araport11) Ipc08G0003670 AT1G78960.3 0 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. lupeol synthase 2;(source:Araport11) Ipc08G0003680 AT1G78955.1 camelliol C synthase 1 Encodes a cyclase that generates predominantly a monocyclic triterpene alcohol. The product is 97% camelliol, 2% achilleol A and 0.2% beta-amyrin. Achilleol is an isomer of camelliol C with a 4-methylenecyclohexanol ring system. camelliol C synthase 1;(source:Araport11) Ipc08G0003690 AT2G22650.3 0 0 FAD-dependent oxidoreductase family protein;(source:Araport11) Ipc08G0003700 AT5G23940.1 HXXXD-type acyl-transferase family protein Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer. HXXXD-type acyl-transferase family protein;(source:Araport11) Ipc08G0003710 AT1G78960.5 0 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. lupeol synthase 2;(source:Araport11) Ipc08G0003720 AT4G33620.1 Cysteine proteinases superfamily protein Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis. Cysteine proteinases superfamily protein;(source:Araport11) Ipc08G0003730 AT1G50010.1 tubulin alpha-2 chain Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. The mRNA is cell-to-cell mobile. tubulin alpha-2 chain;(source:Araport11) Ipc08G0003740 AT1G78955.1 camelliol C synthase 1 Encodes a cyclase that generates predominantly a monocyclic triterpene alcohol. The product is 97% camelliol, 2% achilleol A and 0.2% beta-amyrin. Achilleol is an isomer of camelliol C with a 4-methylenecyclohexanol ring system. camelliol C synthase 1;(source:Araport11) Ipc08G0003750 AT3G09510.1 Ribonuclease H-like superfamily protein 0 Ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0003760 AT1G78955.5 0 Encodes a cyclase that generates predominantly a monocyclic triterpene alcohol. The product is 97% camelliol, 2% achilleol A and 0.2% beta-amyrin. Achilleol is an isomer of camelliol C with a 4-methylenecyclohexanol ring system. camelliol C synthase 1;(source:Araport11) Ipc08G0003770 AT1G30080.1 Glycosyl hydrolase superfamily protein 0 Glycosyl hydrolase superfamily protein;(source:Araport11) Ipc08G0003780 AT5G46210.1 cullin4 Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. cullin4;(source:Araport11) Ipc08G0003790 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc08G0003800 AT1G30135.1 jasmonate-zim-domain protein 8 0 jasmonate-zim-domain protein 8;(source:Araport11) Ipc08G0003810 AT1G76490.1 hydroxy methylglutaryl CoA reductase 1 Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile. hydroxy methylglutaryl CoA reductase 1;(source:Araport11) Ipc08G0003820 AT2G34590.1 Transketolase family protein 0 Transketolase family protein;(source:Araport11) Ipc08G0003830 AT5G42905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein 0 Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11) Ipc08G0003840 AT2G22970.1 serine carboxypeptidase-like 11 0 serine carboxypeptidase-like 11;(source:Araport11) Ipc08G0003850 AT1G30190.1 0 0 cotton fiber protein;(source:Araport11) Ipc08G0003860 AT1G33540.1 serine carboxypeptidase-like 18 0 serine carboxypeptidase-like 18;(source:Araport11) Ipc08G0003870 AT4G18370.1 DEGP protease 5 Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). DEGP protease 5;(source:Araport11) Ipc08G0003880 AT5G46170.1 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0003890 AT4G18380.2 F-box family protein 0 F-box family protein;(source:Araport11) Ipc08G0003900 AT4G18390.2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2;(source:Araport11) Ipc08G0003910 AT1G30220.1 inositol transporter 2 Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors. inositol transporter 2;(source:Araport11) Ipc08G0003920 AT5G14070.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen. Thioredoxin superfamily protein;(source:Araport11) Ipc08G0003930 AT4G33910.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11) Ipc08G0003940 AT5G14070.1 Thioredoxin superfamily protein Encodes a member of the CC-type glutaredoxin (ROXY) family that has been shown to interact with the transcription factor TGA2 and suppress ORA59 promoter activity. ROXY2, together with ROXY1 (AT3G02000), controls anther development. roxy1 roxy2 double mutants are sterile and do not produce pollen. Thioredoxin superfamily protein;(source:Araport11) Ipc08G0003950 AT2G03800.1 D-aminoacyl-tRNA deacylases encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype. D-aminoacyl-tRNA deacylase;(source:Araport11) Ipc08G0003960 AT1G72280.1 endoplasmic reticulum oxidoreductins 1 endoplasmic reticulum oxidoreductin endoplasmic reticulum oxidoreductins 1;(source:Araport11) Ipc08G0003970 AT4G18400.1 0 0 hypothetical protein;(source:Araport11) Ipc08G0003980 AT5G13000.2 glucan synthase-like 12 encodes a gene similar to callose synthase glucan synthase-like 12;(source:Araport11) Ipc08G0003990 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0004000 AT1G65030.1 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein;(source:Araport11) Ipc08G0004010 AT3G52320.1 F-box and associated interaction domains-containing protein 0 F-box and associated interaction domains-containing protein;(source:Araport11) Ipc08G0004020 AT5G57480.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11) Ipc08G0004030 AT5G08490.4 0 0 Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11) Ipc08G0004040 AT4G04890.2 0 Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression. protodermal factor 2;(source:Araport11) Ipc08G0004050 AT1G30260.1 0 0 galactosyltransferase family protein;(source:Araport11) Ipc10G0019870 AT5G63920.1 topoisomerase 3alpha Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. topoisomerase 3alpha;(source:Araport11) Ipc10G0019830 AT3G52460.1 hydroxyproline-rich glycoprotein family protein 0 hydroxyproline-rich glycoprotein family protein;(source:Araport11) Ipc10G0019820 AT3G29750.1 Eukaryotic aspartyl protease family protein 0 Eukaryotic aspartyl protease family protein;(source:Araport11) Ipc10G0019810 AT1G61160.1 0 0 retrotransposon gag;(source:Araport11)