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{"sheet":"Supplementary File 3 Differenti","index":0,"n_rows":6985,"n_cols":30,"rows_kept":2250,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1},"flags":["formulas_cached_only"]}
["#ID","d3-1_count","d3-1_FPKM","d3-2_count","d3-2_FPKM","d3-3_count","d3-3_FPKM","y3-1_count","y3-1_FPKM","y3-2_count","y3-2_FPKM","y3-3_count","y3-3_FPKM","FDR","log2FC","regulated","COG_class","COG_class_annotation","GO_annotation","KEGG_annotation","KOG_class","KOG_class_annotation","Pfam_annotation","Swissprot_annotation","TrEMBL_annotation","eggNOG_class","eggNOG_class_annotation","nr_annotation","GO_second_level_annotation","KEGG_pathway_annotation"]
["c80367.graph_c0",6,0.32,12,0.61,5,0.28,47,2.57,63,3.95,81,4.41,3.29e-09,2.586412896,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: diphthine synthase activity (GO:0004164);; Biological Process: peptidyl-diphthamide biosynthetic process from peptidyl-histidine (GO:0017183);; Biological Process: methylation (GO:0032259);; ","K00586|1.4e-147|oeu:111378944|K00586 diphthine methyl ester synthase [EC:2.1.1.314] | (RefSeq) probable diphthine methyl ester synthase","[J]","Translation, ribosomal structure and biogenesis ","Tetrapyrrole (Corrin/Porphyrin) Methylases","Probable diphthine methyl ester synthase OS=Arabidopsis thaliana OX=3702 GN=At4g31790 PE=2 SV=1","Diphthine methyl ester synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18488 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","probable diphthine methyl ester synthase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c94512.graph_c0",207,8.91,226,9.25,225,9.84,6,0.33,18,0.98,23,0.92,3.11e-50,-4.045340272,"down","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_036528 PE=4 SV=1","--","--","uncharacterized protein LOC111404967 [Olea europaea var. sylvestris]","--","--"]
["c113238.graph_c0",58,0.82,60,2.98,58,0.86,170,4.53,187,4.51,192,5.68,2.89e-10,1.305676161,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K10999|3.5e-289|oeu:111403788|K10999 cellulose synthase A [EC:2.4.1.12] | (RefSeq) cellulose synthase A catalytic subunit 7 [UDP-forming] isoform X1","--","--","PPR repeat family;; PPR repeat;; DYW family of nucleic acid deaminases;; PPR repeat;; Pentatricopeptide repeat domain;; Cellulose synthase;; Glycosyl transferase family group 2;; Cellulose synthase","Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA7 PE=1 SV=1","DYW_deaminase domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19193 PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At4g30700-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c97414.graph_c4",181,10.33,158,8.17,174,9.65,67,4.66,82,6.74,91,6.29,1.34e-12,-1.405604619,"down","--","--","Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: NADH dehydrogenase complex (plastoquinone) assembly (GO:0010258);; Molecular Function: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (GO:0016655);; ","--","--","--","NADH-quinone oxidoreductase cyanobacterial subunit N","NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023933001 PE=4 SV=1","S","Function unknown","NAD(P)H-quinone oxidoreductase subunit N, chloroplastic-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c98940.graph_c0",31,1.08,30,0.99,25,0.9,2,0.07,3,0.12,2,0.07,7.26e-09,-3.481289088,"down","--","--","Cellular Component: chloroplast inner membrane (GO:0009706);; Biological Process: protein transport (GO:0015031);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Protein TIC 214 OS=Chionanthus rupicola OX=2057972 GN=ycf1 PE=3 SV=1","--","--","Ycf1 protein [Chionanthus rupicola]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425)","--"]
["c102389.graph_c0",7,1.28,5,0.9,6,1.02,17,3.05,16,3.58,42,7.93,0.008779982,1.546462503,"up","--","--","--","K09191|1.7e-38|oeu:111369194|K09191 general transcription factor IIIA | (RefSeq) transcription factor IIIA-like isoform X1","--","--","--","--","General transcription factor IIIA OS=Salvia splendens OX=180675 GN=GTF3A PE=4 SV=1","--","--","transcription factor IIIA-like isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c117323.graph_c1",313,6.27,388,7.83,296,5.9,863,18.63,932,24.8,1015,22.09,3.05e-28,1.172884961,"up","--","--","Molecular Function: molybdate ion transmembrane transporter activity (GO:0015098);; Cellular Component: integral component of membrane (GO:0016021);; ","K24175|2.9e-224|oeu:111404253|K24175 MFS transporter, MFS domain-containing protein family, molybdate-anion transporter | (RefSeq) molybdate-anion transporter-like","[G]","Carbohydrate transport and metabolism ","Sugar-tranasporters, 12 TM;; Major Facilitator Superfamily;; Sugar-tranasporters, 12 TM","--","Major facilitator superfamily domain-containing protein 5 OS=Coffea canephora OX=49390 GN=GSCOC_T00019923001 PE=3 SV=1","G","Carbohydrate transport and metabolism","molybdate-anion transporter-like, partial [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110111.graph_c0",21,1.54,49,3.35,46,3.42,15,1.11,5,0.43,8,0.6,3.92e-06,-2.225598238,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101088.graph_c1",4,0.21,11,0.57,9,0.5,25,1.39,29,1.86,37,2.06,0.004208342,1.482850418,"up","--","--","Cellular Component: cell wall (GO:0005618);; Molecular Function: manganese ion binding (GO:0030145);; Molecular Function: nutrient reservoir activity (GO:0045735);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","Cupin;; Cupin domain","Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana OX=3702 GN=At3g10080 PE=2 SV=1","Germin-like protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_023664 PE=3 SV=1","S","Function unknown","germin-like protein subfamily 3 member 2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: nutrient reservoir activity (GO:0045735);; cellular component: extracellular region (GO:0005576)","--"]
["c110560.graph_c0",79,12.17,117,18.57,101,18.16,26,4.18,16,3.73,32,5.65,1.1e-14,-2.27990038,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111751.graph_c0",181,18.96,250,25.13,210,21.75,105,13.72,111,18.35,91,12.83,2.68e-13,-1.363735379,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_003625 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111366237 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c91638.graph_c0",178,35.51,205,37.77,166,35.07,106,21.17,62,14.23,76,15.03,2.69e-13,-1.476828649,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_037118 PE=4 SV=1","--","--","uncharacterized protein LOC111372586 [Olea europaea var. sylvestris]","--","--"]
["c107232.graph_c0",76,1.99,83,2.04,99,2.66,276,7.53,319,9.79,313,8.46,1.34e-16,1.480643264,"up","--","--","Cellular Component: proteasome complex (GO:0000502);; Cellular Component: integral component of membrane (GO:0016021);; ","K01184|3.7e-17|bna:106400152|K01184 polygalacturonase [EC:3.2.1.15] | (RefSeq) polygalacturonase","[R]","General function prediction only ","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Domain of unknown function;; Ankyrin repeat;; Ankyrin repeat","Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana OX=3702 GN=At5g02620 PE=1 SV=1","26S proteasome regulatory complex, subunit PSMD10 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26794 PE=4 SV=1","S","Function unknown","ankyrin repeat-containing protein At5g02620-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Pentose and glucuronate interconversions (ko00040)"]
["c103393.graph_c0",783,53.62,815,51.02,724,50.13,258,16.35,343,25.14,319,20.64,7.42e-46,-1.645950513,"down","[E]","Amino acid transport and metabolism ","Molecular Function: prephenate dehydrogenase (NADP+) activity (GO:0004665);; Biological Process: tyrosine biosynthetic process (GO:0006571);; Molecular Function: prephenate dehydrogenase (NAD+) activity (GO:0008977);; Molecular Function: arogenate dehydrogenase (NADP+) activity (GO:0033730);; ","K15227|3.6e-82|oeu:111368530|K15227 arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78] | (RefSeq) arogenate dehydrogenase 1, chloroplastic-like isoform X1","[E]","Amino acid transport and metabolism ","Prephenate dehydrogenase;; NADP oxidoreductase coenzyme F420-dependent","Arogenate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TYRAAT1 PE=1 SV=1","Arogenate dehydrogenase (NADP(+)) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26530 PE=4 SV=1","E","Amino acid transport and metabolism","arogenate dehydrogenase 1, chloroplastic-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c109128.graph_c0",76,2.88,29,1.1,27,0.9,17,0.58,25,0.95,22,1.3,0.003245331,-1.289871817,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Biological Process: proteolysis (GO:0006508);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein catabolic process (GO:0030163);; ","K00924|8.7e-89|mdm:103448024|K00924 kinase [EC:2.7.1.-] | (RefSeq) aspartic proteinase-like protein 2","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Eukaryotic aspartyl protease;; Xylanase inhibitor C-terminal","Aspartic proteinase 36 OS=Arabidopsis thaliana OX=3702 GN=A36 PE=1 SV=1","Peptidase A1 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005376mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartic proteinase-like protein 2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107482.graph_c1",13,0.99,19,1.37,19,1.49,52,4.06,46,4.12,46,3.57,0.003786895,1.129543233,"up","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: metal ion binding (GO:0046872);; ","K17506|2.3e-156|oeu:111403034|K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 25","[T]","Signal transduction mechanisms ","Protein phosphatase 2C","Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana OX=3702 GN=At2g30020 PE=1 SV=1","Protein-serine/threonine phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28283 PE=3 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 25 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c89714.graph_c0",24,2.36,6,0.55,13,1.38,68,7.04,63,7.54,63,6.51,1.1e-05,1.766982867,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","--","Basic helix-loop-helix (BHLH) DNA-bindingsuperfamily protein OS=Striga asiatica OX=4170 GN=STAS_05584 PE=4 SV=1","--","--","transcription factor EMB1444-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c108754.graph_c1",138,6.19,146,6.84,128,6.14,407,16.22,287,13.7,345,13.74,1.31e-10,1.003248475,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K13407|2.7e-120|mtr:MTR_7g096340|K13407 fatty acid omega-hydroxylase [EC:1.14.-.-] | (RefSeq) cytochrome P450 family 94 protein","[QI]","--","Cytochrome P450","Cytochrome P450 94A1 OS=Vicia sativa OX=3908 GN=CYP94A1 PE=2 SV=2","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_039987 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 94A1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Cutin, suberine and wax biosynthesis (ko00073)"]
["c104948.graph_c0",20,0.81,14,0.83,18,0.82,54,4.06,40,2.32,43,2.66,0.009850707,1.02790875,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c94988.graph_c0",14,1.78,6,0.72,6,0.77,63,8.05,44,6.46,86,10.97,2.14e-08,2.419387195,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105816.graph_c0",7,0.44,12,0.82,7,0.36,47,2.59,96,5.42,77,4.1,7.26e-10,2.632377804,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09285|1.2e-169|oeu:111368704|K09285 AP2-like factor, ANT lineage | (RefSeq) AP2-like ethylene-responsive transcription factor At2g41710 isoform X1","--","--","AP2 domain","AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=1 SV=2","AP2/ERF domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_039835 PE=4 SV=1","K","Transcription","AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c103116.graph_c0",5,0.35,0,0,0,0,54,3.82,92,7.91,92,6.72,4.75e-06,3.837934622,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K14292|1.4e-18|cann:107850838|K14292 trimethylguanosine synthase [EC:2.1.1.-] | (RefSeq) uncharacterized LOC107850838","--","--","Homeodomain","Protein WUSCHEL OS=Antirrhinum majus OX=4151 GN=WUS PE=2 SV=1","protein WUSCHEL-like OS=Juglans regia OX=51240 GN=LOC108997672 PE=4 SV=1","K","Transcription","protein WUSCHEL-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","RNA transport (ko03013)"]
["c108380.graph_c0",75,6.15,144,10.63,124,9.81,543,50.28,644,68.38,597,55.15,8.11e-13,2.019517151,"up","--","--","--","--","--","--","Carbohydrate esterase, sialic acid-specific acetylesterase","--","SASA domain-containing protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a0114661mg PE=4 SV=1","S","Function unknown","probable carbohydrate esterase At4g34215 [Olea europaea var. sylvestris]","--","--"]
["c106914.graph_c1",0,0,0,0,0,0,51,1.57,36,1.27,54,1.66,2.23e-11,5.415605218,"up","--","--","--","K13111|1.3e-12|pxb:103947986|K13111 WD40 repeat-containing protein SMU1 | (RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like","--","--","Transposase family tnp2;; Transposase family tnp2","--","Ankyrin repeat family protein OS=Prunus dulcis OX=3755 GN=Prudu_013904 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC103436169 isoform X2 [Malus domestica]","--","--"]
["c111449.graph_c0",41,2.71,45,2.37,55,2.68,3,0.08,10,1.03,4,0.41,3.53e-11,-3.142987513,"down","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: rhamnogalacturonan endolyase activity (GO:0102210);; ","K18195|0.0e+00|oeu:111367488|K18195 rhamnogalacturonan endolyase [EC:4.2.2.23] | (RefSeq) uncharacterized protein LOC111367488","--","--","Rhamnogalacturonate lyase family;; Polysaccharide lyase family 4, domain III;; Polysaccharide lyase family 4, domain II","--","Rhamnogalacturonan endolyase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21731 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111367488 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c103559.graph_c0",18,5.39,24,5.61,20,5.68,12,3.72,9,4.03,5,1.56,0.007693381,-1.442527854,"down","--","--","--","--","--","--","--","--","Polyketide synthase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22131 PE=4 SV=1","--","--","uncharacterized protein LOC111365901 [Olea europaea var. sylvestris]","--","--"]
["c109622.graph_c0",189,5.51,242,6.64,253,7.57,646,19.15,585,19.89,554,16.37,9.49e-15,1.05785096,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Biological Process: RNA processing (GO:0006396);; Molecular Function: RNA methyltransferase activity (GO:0008173);; ","K15507|1.9e-272|oeu:111399417|K15507 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] | (RefSeq) rRNA methyltransferase 1, mitochondrial","[A]","RNA processing and modification ","SpoU rRNA Methylase family;; RNA 2'-O ribose methyltransferase substrate binding","--","SpoU_sub_bind domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_042917 PE=4 SV=1","A","RNA processing and modification","rRNA methyltransferase 1, mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","--"]
["c94081.graph_c0",19,1.95,30,2.9,30,3.16,82,8.64,80,9.63,91,9.49,1.69e-05,1.321024656,"up","--","--","Molecular Function: MAP kinase kinase kinase activity (GO:0004709);; Molecular Function: ATP binding (GO:0005524);; ","K13414|1.1e-51|oeu:111403602|K13414 mitogen-activated protein kinase kinase kinase 1 [EC:2.7.11.25] | (RefSeq) mitogen-activated protein kinase kinase kinase 1-like","--","--","--","--","MEKK OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08297 PE=4 SV=1","T","Signal transduction mechanisms","mitogen-activated protein kinase kinase kinase 1-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c109019.graph_c1",1473,39.35,1548,38.73,1587,44.24,399,11.8,313,9.9,389,10.65,3.15e-159,-2.387437036,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: RNA processing (GO:0006396);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: mRNA metabolic process (GO:0016071);; Biological Process: mRNA modification (GO:0016556);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: chloroplast RNA processing (GO:0031425);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: chloroplast RNA modification (GO:1900865);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K22651|1.4e-69|mdm:103443441|K22651 E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27] | (RefSeq) LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g50270-like","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR4 PE=1 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01483 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c100704.graph_c0",615,12.6,577,11.19,523,11.04,1899,39.73,1881,45.06,2067,43.05,2.66e-78,1.44569379,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: raffinose alpha-galactosidase activity (GO:0052692);; ","K07407|5.0e-154|oeu:111405919|K07407 alpha-galactosidase [EC:3.2.1.22] | (RefSeq) alpha-galactosidase 1-like","[G]","Carbohydrate transport and metabolism ","Alpha galactosidase A;; Alpha galactosidase C-terminal beta sandwich domain;; Alpha galactosidase A;; Melibiase","Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1","Alpha-galactosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01934 PE=3 SV=1","G","Carbohydrate transport and metabolism","alpha-galactosidase 1-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Galactose metabolism (ko00052);; Glycerolipid metabolism (ko00561);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - globo and isoglobo series (ko00603)"]
["c115844.graph_c0",115,7.84,135,8.87,88,6.25,290,20.07,349,27.49,389,25.64,7.65e-14,1.277850153,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol metabolic process (GO:0016125);; Molecular Function: cholestenol delta-isomerase activity (GO:0047750);; ","K01824|1.3e-112|oeu:111403676|K01824 cholestenol Delta-isomerase [EC:5.3.3.5] | (RefSeq) probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase isoform X1","[I]","Lipid transport and metabolism ","EXPERA (EXPanded EBP superfamily)","Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana OX=3702 GN=At1g20050 PE=2 SV=1","Putative 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Davidia involucrata OX=16924 GN=Din_042943 PE=3 SV=1","I","Lipid transport and metabolism","probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Steroid biosynthesis (ko00100)"]
["c110778.graph_c0",97,6.36,112,4.93,110,5.42,69,3.73,50,2.66,68,3.58,3.28e-06,-1.083044291,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: protein folding (GO:0006457);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: cell junction (GO:0030054);; Cellular Component: external encapsulating structure (GO:0030312);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete vacuolar part (GO:0044437);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: unfolded protein binding (GO:0051082);; Cellular Component: symplast (GO:0055044);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: bounding membrane of organelle (GO:0098588);; Cellular Component: whole membrane (GO:0098805);; ","K08054|5.9e-11|sind:105165487|K08054 calnexin | (RefSeq) calnexin homolog 1","--","--","--","Calnexin homolog OS=Glycine max OX=3847 PE=2 SV=1","Putative calnexin-like OS=Solanum chacoense OX=4108 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","calreticulin family protein [Striga asiatica]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; cellular component: symplast (GO:0055044);; cellular component: membrane part (GO:0044425)","Protein processing in endoplasmic reticulum (ko04141);; Phagosome (ko04145)"]
["c97206.graph_c0",24,0.98,29,1.2,24,1.12,68,2.92,65,3.38,72,2.89,0.000902559,1.062577121,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: ATP binding (GO:0005524);; Molecular Function: tetraacyldisaccharide 4'-kinase activity (GO:0009029);; Biological Process: lipid A biosynthetic process (GO:0009245);; ","K00912|8.2e-115|oeu:111370800|K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] | (RefSeq) probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X1","--","--","Tetraacyldisaccharide-1-P 4'-kinase;; Tetraacyldisaccharide-1-P 4'-kinase","Probable tetraacyldisaccharide 4'-kinase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXK PE=2 SV=1","Tetraacyldisaccharide 4'-kinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_10111 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X4 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c95110.graph_c0",5,0.56,9,0.94,4,0.46,25,2.85,42,5.49,55,6.23,1.18e-05,2.257207113,"up","--","--","Biological Process: defense response (GO:0006952);; ","--","--","--","Pathogenesis-related protein Bet v 1 family","Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1","Polyketide cyclase/dehydrase and lipid transportsuperfamily protein OS=Striga asiatica OX=4170 GN=STAS_16960 PE=4 SV=1","S","Function unknown","MLP-like protein 28 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c34292.graph_c0",141,38.43,131,33.26,123,34.05,0,0,0,0,0,0,5.47e-24,-7.277416027,"down","--","--","--","K05863|4.6e-07|cpap:110811824|K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 | (RefSeq) ADP,ATP carrier protein, mitochondrial-like","--","--","--","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010383 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111365701 [Olea europaea var. sylvestris]","--","--"]
["c112528.graph_c2",6697,187.44,7400,196.64,7017,202.22,3389,90.16,2664,80.61,3075,80.97,1.13e-126,-1.532959513,"down","[IQ]","--","Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast stroma (GO:0009570);; ","K09458|3.0e-194|oeu:111404022|K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] | (RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like isoform X1","[IQ]","--","Beta-ketoacyl synthase, N-terminal domain;; Beta-ketoacyl synthase, C-terminal domain","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS2 PE=1 SV=1","Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004003mg PE=3 SV=1","--","--","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle part (GO:0044422)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c60559.graph_c0",2,0.86,1,0.4,1,0.43,24,6.74,52,18.75,39,10.84,1.02e-08,3.831133783,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101856.graph_c0",72,2.44,28,1.06,21,0.74,0,0,2,0.07,0,0,9.21e-12,-4.899883061,"down","--","--","Molecular Function: motor activity (GO:0003774);; Cellular Component: myosin complex (GO:0016459);; ","--","[Z]","Cytoskeleton ","Myosin tail","--","Paramyosin, long form OS=Anthurium amnicola OX=1678845 GN=Prm PE=4 SV=1","--","--","hypothetical protein GQ607_017958, partial [Colletotrichum asianum]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","--"]
["c96524.graph_c0",72,2.58,55,1.81,39,1.44,1123,40.91,1533,64.71,1757,63.78,6.42e-53,4.315353215,"up","[I]","Lipid transport and metabolism ","Molecular Function: phosphoethanolamine N-methyltransferase activity (GO:0000234);; Biological Process: phosphatidylcholine biosynthetic process (GO:0006656);; Biological Process: methylation (GO:0032259);; ","K05929|4.2e-262|oeu:111372321|K05929 phosphoethanolamine N-methyltransferase [EC:2.1.1.103] | (RefSeq) phosphoethanolamine N-methyltransferase-like","[IR]","--","Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; AdoMet dependent proline di-methyltransferase;; Methyltransferase domain;; Methyltransferase domain;; Tellurite resistance protein TehB;; Nodulation protein S (NodS);; CheR methyltransferase, SAM binding domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; ubiE/COQ5 methyltransferase family;; Mycolic acid cyclopropane synthetase;; CheR methyltransferase, SAM binding domain","Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=NMT1 PE=1 SV=1","Phosphoethanolamine n-methyltransferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_22300 PE=4 SV=1","I","Lipid transport and metabolism","phosphoethanolamine N-methyltransferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Glycerophospholipid metabolism (ko00564)"]
["c117058.graph_c2",32,8.28,23,5.55,48,12.63,4,1.06,0,0,0,0,1.55e-10,-4.245078194,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K12447|3.7e-12|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca013638 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Dendrobium catenatum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c104711.graph_c1",275,119.42,282,114.3,264,113.52,97,38.46,109,50.34,155,65.66,1.47e-19,-1.501782298,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","K11649|6.6e-30|mtr:MTR_6g053260|K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C | (RefSeq) F-box and associated interaction domain protein","--","--","F-box domain;; F-box-like","F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2","F-box domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00017901001 PE=4 SV=1","S","Function unknown","F-box protein CPR30-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c110615.graph_c0",90,14.74,107,17.04,88,14.56,40,8.24,47,9.89,75,12.97,1.93e-05,-1.122625776,"down","--","--","Biological Process: autophagosome assembly (GO:0000045);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: autophagy (GO:0006914);; Biological Process: organelle organization (GO:0006996);; Biological Process: nucleus organization (GO:0006997);; Biological Process: nuclear envelope organization (GO:0006998);; Biological Process: Golgi organization (GO:0007030);; Biological Process: vacuole organization (GO:0007033);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: cellular process (GO:0009987);; Biological Process: endomembrane system organization (GO:0010256);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: regulation of phosphatase activity (GO:0010921);; Biological Process: cellular component organization (GO:0016043);; Biological Process: macroautophagy (GO:0016236);; Molecular Function: phosphatase regulator activity (GO:0019208);; Biological Process: regulation of phosphate metabolic process (GO:0019220);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: protein phosphatase regulator activity (GO:0019888);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: protein catabolic process (GO:0030163);; Molecular Function: enzyme regulator activity (GO:0030234);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of protein modification process (GO:0031399);; Biological Process: nuclear envelope reassembly (GO:0031468);; Molecular Function: ubiquitin-like protein binding (GO:0032182);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: regulation of dephosphorylation (GO:0035303);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Molecular Function: ubiquitin binding (GO:0043130);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: regulation of phosphoprotein phosphatase activity (GO:0043666);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: regulation of cellular process (GO:0050794);; Molecular Function: ATPase binding (GO:0051117);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of phosphorus metabolic process (GO:0051174);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: membrane organization (GO:0061024);; Biological Process: membrane fusion (GO:0061025);; Biological Process: process utilizing autophagic mechanism (GO:0061919);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of molecular function (GO:0065009);; Biological Process: organelle assembly (GO:0070925);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: molecular function regulator (GO:0098772);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: autophagosome organization (GO:1905037);; ","K14012|1.1e-38|sind:105168005|K14012 UBX domain-containing protein 1 | (RefSeq) plant UBX domain-containing protein 4-like","[Y]","Nuclear structure ","--","Plant UBX domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUX4 PE=1 SV=1","UBX domain-containing protein 1 OS=Salvia splendens OX=180675 GN=SHP1 PE=4 SV=1","Y","Nuclear structure","UBX domain-containing protein 1 [Salvia splendens]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: molecular function regulator (GO:0098772)","Protein processing in endoplasmic reticulum (ko04141)"]
["c107585.graph_c0",7,0.12,20,0.34,13,0.52,35,0.99,49,1.53,36,0.66,0.008116111,1.210329108,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10401|1.4e-224|sind:105166061|K10401 kinesin family member 18/19 | (RefSeq) kinesin-like protein KIN-6 isoform X1","[Z]","Cytoskeleton ","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-6 OS=Arabidopsis thaliana OX=3702 GN=KIN6 PE=3 SV=2","Kinesin motor domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_027114 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-6 isoform X2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c97088.graph_c1",8265,1675.2,8817,1669.15,8070,1667.36,3400,706.24,3110,743.38,3486,719.03,7.59e-282,-1.652891448,"down","[E]","Amino acid transport and metabolism ","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; ","K16296|1.3e-69|oeu:111372429|K16296 serine carboxypeptidase-like clade I [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 17 isoform X1","[OE]","--","Serine carboxypeptidase","Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana OX=3702 GN=SCPL18 PE=2 SV=2","Carboxypeptidase OS=Olea europaea subsp. europaea OX=158383 PE=2 SV=1","--","--","serine carboxypeptidase-like 17 isoform X5 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c85647.graph_c0",19,1.65,21,1.69,19,1.69,3,0.27,2,0.2,3,0.26,9.79e-06,-2.80868419,"down","--","--","--","K17795|1.2e-100|oeu:111365789|K17795 mitochondrial import inner membrane translocase subunit TIM17 | (RefSeq) mitochondrial import inner membrane translocase subunit TIM17-2-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Tim17/Tim22/Tim23/Pmp24 family","Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2","Putative Mitochondrial inner membrane translocase complex, subunit Tim17 OS=Davidia involucrata OX=16924 GN=Din_021891 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import inner membrane translocase subunit TIM17-2-like [Olea europaea var. sylvestris]","--","--"]
["c108955.graph_c0",148,5.62,198,6.54,184,6.19,119,4.06,79,2.88,102,3.23,7.31e-09,-1.136138296,"down","--","--","--","K01609|6.2e-08|oeu:111399649|K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] | (RefSeq) indole-3-glycerol phosphate synthase, chloroplastic-like isoform X1","--","--","Aluminium induced protein","Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1","DUF3700 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04662 PE=4 SV=1","S","Function unknown","stem-specific protein TSJT1-like [Olea europaea var. sylvestris]","--","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c95108.graph_c0",18,2.73,16,2.28,9,1.4,54,8.39,52,9.27,52,8.02,0.000140943,1.4978304,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: double-strand break repair (GO:0006302);; Biological Process: DNA recombination (GO:0006310);; ","K10886|1.1e-70|oeu:111367474|K10886 DNA-repair protein XRCC4 | (RefSeq) DNA repair protein XRCC4-like","--","--","--","DNA repair protein XRCC4 OS=Arabidopsis thaliana OX=3702 GN=XRCC4 PE=1 SV=2","DNA-repair protein XRCC4 OS=Salvia splendens OX=180675 GN=XRCC4 PE=4 SV=1","S","Function unknown","DNA repair protein XRCC4-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)","Non-homologous end-joining (ko03450)"]
["c87561.graph_c0",7,1.55,12,2.48,4,0.9,42,9.51,40,10.44,44,9.88,2.13e-05,2.007562757,"up","--","--","Molecular Function: transaminase activity (GO:0008483);; ","--","--","--","DVL family","--","Glutamine--fructose-6-phosphate aminotransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12868 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111386362 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c112887.graph_c0",982,50.1,1043,51.81,933,48.97,5188,257.68,4812,270.58,5432,270.73,3.87e-295,2.059094803,"up","[V]","Defense mechanisms ","Biological Process: signal transduction (GO:0007165);; Molecular Function: NADH pyrophosphatase activity (GO:0035529);; Molecular Function: ADP-ribose diphosphatase activity (GO:0047631);; Molecular Function: NAD binding (GO:0051287);; ","K22763|1.9e-30|lja:Lj2g3v1989220.3|K22763 deubiquitinase DESI2 [EC:3.4.19.12] | (RefSeq) Lj2g3v1989220.3; -","[T]","Signal transduction mechanisms ","NUDIX domain;; Nudix hydrolase domain","Nudix hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=NUDT2 PE=1 SV=1","Nudix hydrolase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011677mg PE=3 SV=1","T","Signal transduction mechanisms","nudix hydrolase 10-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","--"]
["c112165.graph_c0",139,5.38,149,4.99,139,5.14,532,19.32,461,19.63,521,19.32,1.11e-30,1.495837671,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K08669|3.8e-152|oeu:111386814|K08669 HtrA serine peptidase 2 [EC:3.4.21.108] | (RefSeq) putative protease Do-like 14","[O]","Posttranslational modification, protein turnover, chaperones ","Trypsin-like peptidase domain;; PDZ domain;; PDZ domain;; PDZ domain","Putative protease Do-like 14 OS=Arabidopsis thaliana OX=3702 GN=DEGP14 PE=3 SV=2","Serine protease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00238 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","putative protease Do-like 14, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c104654.graph_c0",141,2.36,111,1.74,129,2.22,362,6.32,267,5.28,395,6.86,4.23e-11,1.085021128,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","K11838|1.1e-07|nsy:104229842|K11838 ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] | (RefSeq) uncharacterized protein LOC104229842","--","--","PB1 domain","Protein NLP5 OS=Arabidopsis thaliana OX=3702 GN=NLP5 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29746 PE=4 SV=1","K","Transcription","protein NLP5-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c77147.graph_c0",29,3.84,9,1.12,15,2.03,1795,243.43,2374,369.13,2153,289.87,4.24e-50,6.234778218,"up","--","--","Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1","Non-specific lipid-transfer protein OS=Nyssa sinensis OX=561372 GN=F0562_015125 PE=3 SV=1","G","Carbohydrate transport and metabolism","non-specific lipid-transfer protein 1-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c109320.graph_c0",9,0.62,9,0.4,7,0.48,48,2.64,32,2.2,31,1.78,0.00035334,1.71574984,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97268.graph_c0",341,22.98,310,19.73,292,20.24,138,9.52,145,11.46,160,11.04,2.77e-22,-1.40430519,"down","--","--","--","--","--","--","Proline-rich nuclear receptor coactivator motif","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009577 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111393260 [Olea europaea var. sylvestris]","--","--"]
["c98665.graph_c0",3434,154.21,3746,159.16,3341,154.52,2148,98.82,2088,110.04,2166,99.52,2.63e-70,-1.035544592,"down","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; ","K00847|5.7e-131|oeu:111384335|K00847 fructokinase [EC:2.7.1.4] | (RefSeq) fructokinase-2","[G]","Carbohydrate transport and metabolism ","pfkB family carbohydrate kinase","Fructokinase-2 OS=Solanum habrochaites OX=62890 GN=FRK2 PE=2 SV=1","Fructokinase-2 OS=Nicotiana attenuata OX=49451 GN=FRK2 PE=3 SV=1","G","Carbohydrate transport and metabolism","fructokinase-2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Fructose and mannose metabolism (ko00051);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c99657.graph_c0",7,0.2,6,0.16,0,0,115,3.61,162,5.85,124,3.9,2.42e-23,4.370052328,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13418|1.3e-26|dosa:Os08t0176200-01|K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) Os08g0176200; Serine/threonine protein kinase-related domain containing protein.","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine rich repeat","Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana OX=3702 GN=At1g68400 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03565 PE=4 SV=1","T","Signal transduction mechanisms","probable leucine-rich repeat receptor-like protein kinase At1g68400 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106439.graph_c0",30,4.11,29,3.64,20,2.47,12,1.04,11,1.13,10,0.83,0.001931411,-1.478345133,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115788.graph_c0",1038,19.73,1143,21.16,949,18.66,599,12.02,653,15.25,672,13.38,8.08e-31,-1.01808689,"down","--","--","Molecular Function: AMP deaminase activity (GO:0003876);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: IMP salvage (GO:0032264);; ","K01490|0.0e+00|oeu:111399347|K01490 AMP deaminase [EC:3.5.4.6] | (RefSeq) AMP deaminase-like isoform X1","[F]","Nucleotide transport and metabolism ","Adenosine/AMP deaminase;; Adenosine/AMP deaminase;; Adenosine/AMP deaminase","AMP deaminase OS=Arabidopsis thaliana OX=3702 GN=AMPD PE=1 SV=2","AMP deaminase OS=Dorcoceras hygrometricum OX=472368 GN=F511_30211 PE=3 SV=1","F","Nucleotide transport and metabolism","AMP deaminase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Purine metabolism (ko00230)"]
["c93587.graph_c0",7,0.2,10,0.27,7,0.21,263,7.75,236,7.97,265,7.78,1.24e-44,4.527094918,"up","--","--","Molecular Function: DNA binding (GO:0003677);; ","K09422|7.9e-218|oeu:111396191|K09422 transcription factor MYB, plant | (RefSeq) uncharacterized protein LOC111396191","[K]","Transcription ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2","Putative transcription factor RAX1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_022971 PE=4 SV=1","--","--","uncharacterized protein LOC111396191 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c104717.graph_c0",170,34.67,140,26.28,135,27.71,458,93.42,401,94.16,471,95.91,1.26e-19,1.24869974,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; ","K09571|3.5e-42|oeu:111371298|K09571 FK506-binding protein 4/5 [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans isomerase FKBP62-like","[O]","Posttranslational modification, protein turnover, chaperones ","FKBP-type peptidyl-prolyl cis-trans isomerase","Peptidyl-prolyl cis-trans isomerase FKBP62 OS=Arabidopsis thaliana OX=3702 GN=FKBP62 PE=1 SV=2","Peptidylprolyl isomerase OS=Dorcoceras hygrometricum OX=472368 GN=F511_04782 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","peptidyl-prolyl cis-trans isomerase FKBP62-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c106204.graph_c1",33,0.9,26,1.22,34,1.67,168,7.2,169,8.57,203,9.76,1.35e-19,2.175193721,"up","--","--","--","--","--","--","--","--","SAM domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06017 PE=4 SV=1","A","RNA processing and modification","uncharacterized protein LOC111376228 [Olea europaea var. sylvestris]","--","--"]
["c96287.graph_c0",57,3.19,59,3.12,61,3.47,234,13.52,224,14.71,230,13.06,5.04e-17,1.620365353,"up","[R]","General function prediction only ","--","--","--","--","Protein of unknown function, DUF393","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013731mg PE=4 SV=1","S","Function unknown","PREDICTED: DCC family protein At1g52590, chloroplastic [Erythranthe guttata]","--","--"]
["c102026.graph_c0",258,9.66,271,10.03,207,8.45,680,26.24,736,31.01,792,29.69,8.85e-28,1.262082016,"up","--","--","--","--","--","--","zinc-finger of the FCS-type, C2-C2","FCS-Like Zinc finger 14 OS=Arabidopsis thaliana OX=3702 GN=FLZ14 PE=1 SV=1","FLZ-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06655 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111404208 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c101668.graph_c0",674,25.09,758,26.69,758,29.07,107,4.07,86,3.75,94,3.56,9.24e-133,-3.240557648,"down","[QV]","--","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: heme binding (GO:0020037);; Molecular Function: (22S)-22-hydroxy-5alpha-campestan-3-one C-23 hydroxylase activity (GO:0102097);; ","K12638|2.4e-246|oeu:111367697|K12638 3-epi-6-deoxocathasterone 23-monooxygenase [EC:1.14.14.147] | (RefSeq) 3-epi-6-deoxocathasterone 23-monooxygenase","[QI]","--","Cytochrome P450","3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 OS=Arabidopsis thaliana OX=3702 GN=CYP90D1 PE=1 SV=1","Putative 3-epi-6-deoxocathasterone 23-monooxygenase isoform X2 OS=Davidia involucrata OX=16924 GN=Din_006078 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","3-epi-6-deoxocathasterone 23-monooxygenase [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Brassinosteroid biosynthesis (ko00905)"]
["c100768.graph_c1",17,1.09,20,1.19,13,0.99,46,1.8,58,2.55,62,2.07,0.000306603,1.361368626,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2","E3 ubiquitin ligase OS=Salvia splendens OX=180675 GN=Saspl_001542 PE=4 SV=1","T","Signal transduction mechanisms","U-box domain-containing protein 33-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103588.graph_c2",8,0.36,10,0.39,4,0.19,136,5.56,139,7.03,147,5.59,1.72e-25,3.792194851,"up","--","--","Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K01206|2.0e-15|bna:106353980|K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) alpha-L-fucosidase 3","--","--","GDSL-like Lipase/Acylhydrolase;; GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana OX=3702 GN=At5g45910 PE=2 SV=1","Lipase_GDSL domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013871 PE=3 SV=1","S","Function unknown","GDSL esterase/lipase At5g45910 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824)","Other glycan degradation (ko00511)"]
["c75501.graph_c1",7,0.3,6,0.24,5,0.22,18,0.79,29,1.46,31,1.36,0.003284017,1.642547808,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","K24193|4.9e-17|dcr:108194393|K24193 MFS transporter, SP family, sugar:H+ symporter | (RefSeq) sugar transport protein 10","--","--","F-box associated;; F-box associated domain;; F-box domain;; F-box-like","F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1","F-box and associated interaction domains-containing protein OS=Striga asiatica OX=4170 GN=STAS_22749 PE=4 SV=1","S","Function unknown","F-box protein At3g07870-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c77927.graph_c0",27,2.16,30,2.27,22,1.81,17,1.39,5,0.47,6,0.49,0.001153838,-1.685215926,"down","--","--","--","K01513|8.8e-06|ats:109769794|K01513 ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3 [EC:3.1.4.1 3.6.1.9] | (RefSeq) uncharacterized protein LOC109769794","--","--","Plant protein 1589 of unknown function (A_thal_3526)","--","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004515 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111405392 [Olea europaea var. sylvestris]","--","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240);; Starch and sucrose metabolism (ko00500);; Riboflavin metabolism (ko00740);; Nicotinate and nicotinamide metabolism (ko00760);; Pantothenate and CoA biosynthesis (ko00770)"]
["c92259.graph_c0",33,2.91,43,3.84,51,4.07,0,0,0,0,3,0.28,3.39e-13,-4.802971834,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112506.graph_c0",577,17.12,571,17.37,488,13.53,39,0.95,27,0.93,28,0.6,4.25e-125,-4.39967678,"down","--","--","--","K01303|3.6e-78|fve:101311565|K01303 acylaminoacyl-peptidase [EC:3.4.19.1] | (RefSeq) uncharacterized LOC101311565","[R]","General function prediction only ","Retrotransposon gag protein","--","Retrotrans_gag domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45413 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111372832 [Olea europaea var. sylvestris]","--","--"]
["c80525.graph_c0",371,54.78,384,53.33,350,52.96,935,139.81,1128,193.31,1181,175.29,1.86e-30,1.23058977,"up","--","--","--","--","--","--","Glycine rich protein family","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011208 PE=4 SV=1","--","--","glycine-rich protein 3 short isoform-like [Olea europaea var. sylvestris]","--","--"]
["c43471.graph_c0",75,10.74,67,9.01,53,7.77,178,36.16,161,37.65,177,35.76,2.63e-07,1.071113612,"up","--","--","--","--","--","--","Trm112p-like protein","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00037033001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111390835 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c112616.graph_c1",6,0.15,10,0.33,7,0.18,36,0.92,25,0.88,37,1.06,0.001006538,1.643508856,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K03798|3.7e-65|pda:103716421|K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain","Pentatricopeptide repeat-containing protein At3g51320 OS=Arabidopsis thaliana OX=3702 GN=At3g51320 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05668 PE=4 SV=1","L","Replication, recombination and repair","pentatricopeptide repeat-containing protein At3g51320 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c112802.graph_c0",135,5.22,138,5.12,130,5.19,387,15.28,359,16.09,410,15.84,1.51e-17,1.190594896,"up","--","--","Molecular Function: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (GO:0003830);; Biological Process: protein N-linked glycosylation (GO:0006487);; Cellular Component: integral component of membrane (GO:0016021);; ","K00737|4.4e-184|sind:105179857|K00737 beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144] | (RefSeq) uncharacterized protein LOC105179857 isoform X1","--","--","Glycosyltransferase family 17","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_005784 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105179857 isoform X1 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","N-Glycan biosynthesis (ko00510)"]
["c110779.graph_c0",1096,48.5,1107,47.79,1063,49.72,3714,149.23,3957,180.56,4476,174.46,8.08e-114,1.570023456,"up","[E]","Amino acid transport and metabolism ","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: biological_process (GO:0008150);; Biological Process: gibberellic acid homeostasis (GO:0010336);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Cellular Component: vesicle (GO:0031982);; Biological Process: homeostatic process (GO:0042592);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: chemical homeostasis (GO:0048878);; Biological Process: ion homeostasis (GO:0050801);; Biological Process: anion homeostasis (GO:0055081);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: lipid homeostasis (GO:0055088);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: intracellular vesicle (GO:0097708);; ","K14638|1.3e-240|oeu:111374812|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 3.1 isoform X1","[E]","Amino acid transport and metabolism ","POT family;; POT family","Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1","NPF family transporter OS=Petunia parodii OX=55890 GN=NPF PE=2 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 3.1 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226)","--"]
["c99834.graph_c1",38,1.39,40,1.39,61,2.31,166,6.23,155,6.66,161,6.01,1.87e-09,1.443586768,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Cellular Component: plastid (GO:0009536);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: response to very low light intensity stimulus (GO:0055122);; ","K09531|2.5e-267|oeu:111368767|K09531 DnaJ homolog subfamily C member 11 | (RefSeq) chaperone protein dnaJ 13","[O]","Posttranslational modification, protein turnover, chaperones ","Domain of unknown function (DUF3395);; DnaJ domain","Chaperone protein dnaJ 13 OS=Arabidopsis thaliana OX=3702 GN=ATJ13 PE=1 SV=2","Chaperone protein dnaj 13 OS=Nicotiana attenuata OX=49451 GN=ATJ13 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","chaperone protein dnaJ 13 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","--"]
["c88934.graph_c0",150,19.42,143,17.4,110,14.58,27,3.58,35,5.45,32,4.29,4.11e-21,-2.37354995,"down","--","--","Biological Process: sucrose metabolic process (GO:0005985);; Molecular Function: sucrose synthase activity (GO:0016157);; ","K00695|6.3e-27|oeu:111406368|K00695 sucrose synthase [EC:2.4.1.13] | (RefSeq) sucrose synthase 2-like","[M]","Cell wall/membrane/envelope biogenesis ","Sucrose synthase","Sucrose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=SUS3 PE=1 SV=1","Sucrose synthase OS=Striga asiatica OX=4170 GN=STAS_00255 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","sucrose synthase 2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c83322.graph_c0",0,0,0,0,1,0.11,24,2.64,22,2.77,22,2.4,8.53e-07,4.008836951,"up","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: root system development (GO:0022622);; Biological Process: signaling (GO:0023052);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: root development (GO:0048364);; Biological Process: lateral root development (GO:0048527);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to cytokinin stimulus (GO:0071368);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Cellular Component: cell periphery (GO:0071944);; Biological Process: post-embryonic plant organ development (GO:0090696);; Biological Process: response to alcohol (GO:0097305);; Biological Process: plant organ development (GO:0099402);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","Transcription factor regulating root and shoot growth via Pin3","Protein BREVIS RADIX OS=Arabidopsis thaliana OX=3702 GN=BRX PE=1 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02505 PE=4 SV=1","S","Function unknown","protein BREVIS RADIX-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)","--"]
["c99246.graph_c0",14,1.31,10,0.91,7,0.76,85,8.39,68,7.31,94,8.88,7.09e-12,2.562780877,"up","--","--","--","K14565|1.0e-38|oeu:111403302|K14565 nucleolar protein 58 | (RefSeq) probable nucleolar protein 5-2","[AJ]","--","--","Probable nucleolar protein 5-1 OS=Arabidopsis thaliana OX=3702 GN=NOP5-1 PE=1 SV=2","Nop domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_019776 PE=3 SV=1","--","--","probable nucleolar protein 5-2 [Olea europaea var. sylvestris]","--","Ribosome biogenesis in eukaryotes (ko03008)"]
["c104295.graph_c0",798,56.34,843,56.75,711,51.09,521,38.26,391,32.77,491,34.56,1.04e-27,-1.066831118,"down","--","--","Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Molecular Function: lipid binding (GO:0008289);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: seed germination (GO:0009845);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to inorganic substance (GO:0010035);; Molecular Function: abscisic acid binding (GO:0010427);; Biological Process: negative regulation of phosphorus metabolic process (GO:0010563);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: regulation of phosphatase activity (GO:0010921);; Biological Process: negative regulation of phosphatase activity (GO:0010923);; Biological Process: regulation of phosphate metabolic process (GO:0019220);; Biological Process: regulation of metabolic process (GO:0019222);; Molecular Function: isoprenoid binding (GO:0019840);; Biological Process: signaling (GO:0023052);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of protein modification process (GO:0031399);; Biological Process: negative regulation of protein modification process (GO:0031400);; Molecular Function: carboxylic acid binding (GO:0031406);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: negative regulation of cellular protein metabolic process (GO:0032269);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: negative regulation of phosphoprotein phosphatase activity (GO:0032515);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Molecular Function: monocarboxylic acid binding (GO:0033293);; Biological Process: response to lipid (GO:0033993);; Biological Process: regulation of dephosphorylation (GO:0035303);; Biological Process: regulation of protein dephosphorylation (GO:0035304);; Biological Process: negative regulation of dephosphorylation (GO:0035305);; Biological Process: negative regulation of protein dephosphorylation (GO:0035308);; Molecular Function: small molecule binding (GO:0036094);; Biological Process: response to chemical (GO:0042221);; Molecular Function: hormone binding (GO:0042562);; Biological Process: negative regulation of catalytic activity (GO:0043086);; Molecular Function: ion binding (GO:0043167);; Molecular Function: anion binding (GO:0043168);; Molecular Function: organic acid binding (GO:0043177);; Molecular Function: alcohol binding (GO:0043178);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: regulation of phosphoprotein phosphatase activity (GO:0043666);; Biological Process: negative regulation of molecular function (GO:0044092);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of phosphate metabolic process (GO:0045936);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of phosphorus metabolic process (GO:0051174);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: negative regulation of protein metabolic process (GO:0051248);; Biological Process: regulation of hydrolase activity (GO:0051336);; Biological Process: negative regulation of hydrolase activity (GO:0051346);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of molecular function (GO:0065009);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: seedling development (GO:0090351);; Biological Process: response to alcohol (GO:0097305);; Biological Process: cellular response to alcohol (GO:0097306);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: negative regulation of protein serine/threonine phosphatase activity (GO:1905183);; ","K14496|2.9e-34|oeu:111402881|K14496 abscisic acid receptor PYR/PYL family | (RefSeq) abscisic acid receptor PYL8-like","--","--","--","Abscisic acid receptor PYL3 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL3 PE=1 SV=1","Abscisic acid receptor PYL 5 OS=Striga hermonthica OX=68872 GN=PYL5 PE=2 SV=1","S","Function unknown","abscisic acid receptor PYL8-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c114201.graph_c3",28,5.97,35,6.98,18,3.91,92,20.12,57,14.3,65,14.08,0.001996325,1.051884573,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108371.graph_c0",179,6.12,159,4.8,153,6.15,57,1.1,113,3.01,105,2.61,9.05e-07,-1.135709958,"down","[KL]","--","Molecular Function: ATP binding (GO:0005524);; ","K10875|0.0e+00|oeu:111410307|K10875 DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-] | (RefSeq) SNF2 domain-containing protein CLASSY 4-like","[L]","Replication, recombination and repair ","SNF2 family N-terminal domain;; Helicase conserved C-terminal domain;; Type III restriction enzyme, res subunit","SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana OX=3702 GN=CLSY3 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000457mg PE=4 SV=1","L","Replication, recombination and repair","SNF2 domain-containing protein CLASSY 4-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Homologous recombination (ko03440)"]
["c89978.graph_c0",17,0.63,8,0.28,10,0.38,87,3.3,97,4.26,119,4.49,2.44e-14,2.69008144,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_009024 PE=4 SV=1","--","--","uncharacterized protein LOC111379004 [Olea europaea var. sylvestris]","--","--"]
["c76957.graph_c0",52,5.9,59,6.31,47,5.47,44,5.12,26,3.47,24,2.77,0.002485452,-1.035614848,"down","--","--","Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_028058 PE=4 SV=1","--","--","hypothetical protein F0562_028058 [Nyssa sinensis]","molecular function: binding (GO:0005488)","--"]
["c116274.graph_c0",82,1.58,91,2.31,84,1.53,337,8.61,308,8.47,382,9.6,2.53e-25,1.661554808,"up","--","--","Molecular Function: protein binding (GO:0005515);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: biological_process (GO:0008150);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to bacterium (GO:0009617);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to external biotic stimulus (GO:0043207);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: defense response to other organism (GO:0098542);; ","--","--","--","NPH3 family;; BTB/POZ domain","BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1IP1 PE=1 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09911 PE=3 SV=1","S","Function unknown","BTB/POZ domain-containing protein At5g67385-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704)","--"]
["c106233.graph_c0",36,4.07,15,1.49,21,2.96,463,61,414,60.03,500,64.95,7.59e-72,3.878889994,"up","--","--","Biological Process: iron-sulfur cluster assembly (GO:0016226);; ","K09015|2.2e-11|oeu:111398548|K09015 Fe-S cluster assembly protein SufD | (RefSeq) protein ABCI7, chloroplastic","--","--","--","--","Uncharacterized protein ophh-74 (Fragment) OS=Phillyrea latifolia OX=126558 GN=ophh-74 PE=2 SV=1","--","--","protein ABCI7, chloroplastic [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c92229.graph_c0",250,13.72,195,10.11,180,10.16,26,1.46,22,1.41,23,1.28,5.47e-44,-3.401556929,"down","[R]","General function prediction only ","Cellular Component: integral component of membrane (GO:0016021);; ","--","[R]","General function prediction only ","Methyltransferase domain;; Cephalosporin hydroxylase","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_021803 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111379532 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c92785.graph_c0",12,1.11,4,0.34,5,0.53,57,4.42,52,4.33,47,3.65,1.73e-07,2.41792361,"up","--","--","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","--","--","--","Peptidase inhibitor I9","Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana OX=3702 GN=SBT2.6 PE=2 SV=1","Cucumisin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28485 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","subtilisin-like protease SBT2.5 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c102502.graph_c0",84,2.86,102,3.29,97,3.41,50,1.74,60,2.4,46,1.6,6.5e-06,-1.154105785,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c100156.graph_c1",300,20.97,368,25.25,259,19.09,71,5.01,61,4.87,72,4.99,5.2e-46,-2.481907827,"down","--","--","--","K03844|1.6e-10|mng:MNEG_1379|K03844 alpha-1,2-mannosyltransferase [EC:2.4.1.131] | (RefSeq) alpha-1,2-mannosyltransferase","--","--","--","ACT domain-containing protein ACR12 OS=Arabidopsis thaliana OX=3702 GN=ACR12 PE=2 SV=1","ACT domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_02679 PE=4 SV=1","S","Function unknown","hypothetical protein C3L33_02679, partial [Rhododendron williamsianum]","--","N-Glycan biosynthesis (ko00510);; Various types of N-glycan biosynthesis (ko00513)"]
["c43597.graph_c0",10,3.35,4,1.08,12,3.82,43,13.35,28,10.31,34,9.86,0.001685881,1.564045925,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[S]","Function unknown ","--","--","Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_030474 PE=4 SV=1","S","Function unknown","SNARE associated Golgi protein [Spatholobus suberectus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97242.graph_c0",5,0.36,1,0.07,8,0.55,46,3.38,46,3.79,44,2.98,1.37e-07,2.719469194,"up","[E]","Amino acid transport and metabolism ","Molecular Function: 3-dehydroquinate dehydratase activity (GO:0003855);; Molecular Function: shikimate 3-dehydrogenase (NADP+) activity (GO:0004764);; ","K13832|1.2e-102|oeu:111367900|K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] | (RefSeq) bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1","[E]","Amino acid transport and metabolism ","Shikimate 5'-dehydrogenase C-terminal domain","Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB3004 PE=1 SV=1","Shikimate dehydrogenase OS=Coffea canephora OX=49390 GN=GSCOC_T00015961001 PE=3 SV=1","E","Amino acid transport and metabolism","bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c88011.graph_c0",8,0.67,11,0.88,2,0.18,77,6.45,83,8.37,76,6.08,6.97e-13,3.019878775,"up","--","--","Molecular Function: actin binding (GO:0003779);; Biological Process: cytoskeleton organization (GO:0007010);; ","K17261|6.6e-35|oeu:111394604|K17261 adenylyl cyclase-associated protein | (RefSeq) cyclase-associated protein 1-like","[ZT]","--","--","Cyclase-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=CAP1 PE=2 SV=1","Adenylyl cyclase-associated protein OS=Lupinus albus OX=3870 GN=Lalb_Chr23g0265401 PE=3 SV=1","--","--","cyclase-associated protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c36647.graph_c0",0,0,0,0,0,0,44,1.81,22,1.03,33,1.34,3.83e-09,4.944206691,"up","--","--","--","K09753|8.1e-26|zju:107408516|K09753 cinnamoyl-CoA reductase [EC:1.2.1.44] | (RefSeq) cinnamoyl-CoA reductase 1-like isoform X1","--","--","gag-polypeptide of LTR copia-type","--","uncharacterized protein LOC109022054 OS=Juglans regia OX=51240 GN=LOC109022054 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein F2P56_037245 [Juglans regia]","--","Phenylpropanoid biosynthesis (ko00940)"]
["c109828.graph_c0",676,19.89,702,19.74,652,19.44,114,3.79,103,4.16,103,3.46,6.96e-125,-2.974083735,"down","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K01534|4.0e-56|var:108330779|K01534 Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] | (RefSeq) cadmium/zinc-transporting ATPase HMA3-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Fungal protein kinase","Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21592 PE=4 SV=1","T","Signal transduction mechanisms","receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c41730.graph_c0",253,81.47,300,89.71,244,79.55,172,56.85,121,45.97,168,54.91,1.1e-12,-1.108181792,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109978.graph_c0",15,1.06,12,0.82,1,0.09,83,5.92,94,7.83,142,10.29,4.45e-05,2.7562525,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0071070 PE=4 SV=1","--","--","uncharacterized protein LOC111376233 [Olea europaea var. sylvestris]","--","--"]
["c108352.graph_c0",5,0.21,0,0,5,0.2,39,1.97,70,4.18,62,2.96,1.84e-10,3.437053417,"up","[R]","General function prediction only ","Molecular Function: manganese ion transmembrane transporter activity (GO:0005384);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion transmembrane transporter activity (GO:0046873);; Biological Process: manganese ion transmembrane transport (GO:0071421);; ","K23541|1.9e-22|ccp:CHC_T00007979001|K23541 Ca2+/H+ antiporter, TMEM165/GDT1 family | (RefSeq) hypothetical protein","[S]","Function unknown ","Uncharacterized protein family UPF0016","Protein PAM71, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71 PE=1 SV=2","GDT1 family protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008529mg PE=3 SV=1","S","Function unknown","uncharacterized protein LOC105177445 isoform X1 [Sesamum indicum]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","--"]
["c105128.graph_c1",52,3.26,41,2.65,58,4.04,117,7.96,144,11.12,122,8.2,7.74e-05,1.005809002,"up","--","--","--","K16251|6.3e-06|mus:103977421|K16251 DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6] | (RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1","--","--","Protein of unknown function (DUF3223)","--","Protein DCL like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04753 PE=4 SV=1","S","Function unknown","protein DCL homolog, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c111978.graph_c1",7,0.2,5,0.13,6,0.17,51,1.46,51,1.65,81,2.29,4.63e-10,2.832058518,"up","--","--","--","--","--","--","Plant protein of unknown function (DUF936);; Plant protein of unknown function (DUF936)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16834 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111385314 [Olea europaea var. sylvestris]","--","--"]
["c102503.graph_c0",23,1.29,40,2.25,36,2.08,17,0.97,13,0.85,24,1.55,0.007336988,-1.149994613,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115112.graph_c0",75,6.76,88,7.48,56,5.43,13,1.3,29,4.48,41,4.8,1.25e-06,-1.665184833,"down","--","--","--","--","--","--","--","--","--","L","Replication, recombination and repair","zinc finger BED domain-containing protein RICESLEEPER 2-like [Papaver somniferum]","--","--"]
["c80357.graph_c0",145,14.85,145,13.98,163,17.13,426,44.65,396,47.58,421,43.85,7.49e-16,1.126298502,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_02440 PE=4 SV=1","--","--","uncharacterized protein LOC111396075 [Olea europaea var. sylvestris]","--","--"]
["c113796.graph_c0",12,0.65,6,0.32,5,0.3,134,4.36,113,4.16,131,4.31,2.59e-22,3.569696871,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K09571|1.5e-88|qsu:112039090|K09571 FK506-binding protein 4/5 [EC:5.2.1.8] | (RefSeq) LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase FKBP65-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Trifolium pratense OX=57577 GN=L195_g016630 PE=4 SV=1","L","Replication, recombination and repair","retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c102050.graph_c0",2006,71.51,1804,60.94,1606,58.64,6357,230.32,5174,212.31,6038,217.35,2.41e-86,1.372400517,"up","[IR]","--","Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K00679|6.1e-27|cic:CICLE_v10027727mg|K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] | (RefSeq) hypothetical protein","--","--","GDSL-like Lipase/Acylhydrolase;; GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana OX=3702 GN=At4g16230 PE=3 SV=2","GDSL esterase/lipase At4g16230-like OS=Nicotiana tabacum OX=4097 GN=LOC107805226 PE=3 SV=1","I","Lipid transport and metabolism","GDSL esterase/lipase At4g16230-like [Nicotiana tomentosiformis]","molecular function: catalytic activity (GO:0003824)","Glycerolipid metabolism (ko00561)"]
["c114160.graph_c2",1,0.03,3,0.09,0,0,53,1.55,58,2.02,98,2.91,4.16e-14,4.653864548,"up","--","--","Biological Process: oligopeptide transport (GO:0006857);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: transmembrane transport (GO:0055085);; ","K14638|2.0e-44|thj:104827041|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 8.2-like","[E]","Amino acid transport and metabolism ","POT family;; POT family","Protein NRT1/ PTR FAMILY 6.2 OS=Arabidopsis thaliana OX=3702 GN=NPF6.2 PE=1 SV=1","Major facilitator superfamily protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_037019 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 6.2-like [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215)","--"]
["c114526.graph_c0",722,22.57,455,12.85,403,11.86,200,5.78,83,3.66,105,3.48,2.7e-07,-2.230730783,"down","[M]","Cell wall/membrane/envelope biogenesis ","Cellular Component: photosystem I (GO:0009522);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion binding (GO:0046872);; ","K02690|4.9e-190|sind:11452404|K02690 photosystem I P700 chlorophyll a apoprotein A2 | (RefSeq) psaB, SIC0393; photosystem I P700 chlorophyll a apoprotein A2","--","--","Protein of unknown function (DUF568);; Eukaryotic cytochrome b561;; Photosystem I psaA/psaB protein;; LSD1 zinc finger","Photosystem I P700 chlorophyll a apoprotein A2 OS=Jasminum nudiflorum OX=126431 GN=psaB PE=3 SV=1","Photosystem I P700 chlorophyll a apoprotein A1 OS=Carpinus fangiana OX=176857 GN=FH972_026755 PE=3 SV=1","C","Energy production and conversion","cytochrome b561 and DOMON domain-containing protein At3g25290-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Photosynthesis (ko00195)"]
["c93858.graph_c0",7,0.32,4,0.17,5,0.35,27,1.27,31,1.67,33,1.54,0.000200745,2.00535306,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K20892|3.0e-08|gsl:Gasu_07340|K20892 beta-arabinofuranosyltransferase [EC:2.4.2.-] | (RefSeq) hypothetical protein","--","--","Nucleotide-diphospho-sugar transferase","Uncharacterized protein At4g15970 OS=Arabidopsis thaliana OX=3702 GN=At4g15970 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034472 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein At4g15970-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109317.graph_c0",2,0.04,8,0.16,9,0.19,22,0.47,21,0.51,34,0.72,0.00773118,1.530686018,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K23541|2.7e-96|cqi:110701580|K23541 Ca2+/H+ antiporter, TMEM165/GDT1 family | (RefSeq) pentatricopeptide repeat-containing protein At4g21065-like","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28207 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","pentatricopeptide repeat-containing protein At1g03540 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c102686.graph_c0",9,0.3,10,0.31,9,0.3,72,2.42,63,2.42,75,2.51,2.28e-10,2.472223751,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K10663|1.7e-171|oeu:111386981|K10663 E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ATL4","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; RING-H2 zinc finger domain;; RING-like zinc finger","E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana OX=3702 GN=ATL4 PE=1 SV=1","RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08593 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin-protein ligase ATL4 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99938.graph_c0",317,9.39,345,12.33,300,11.69,1861,66.61,1638,67.46,1925,63.49,4.09e-153,2.167735592,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Cellular Component: plastid inner membrane (GO:0009528);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast inner membrane (GO:0009706);; Cellular Component: chloroplast envelope (GO:0009941);; Cellular Component: membrane (GO:0016020);; Cellular Component: organelle inner membrane (GO:0019866);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: chloroplast membrane (GO:0031969);; Cellular Component: envelope (GO:0031975);; Cellular Component: plastid membrane (GO:0042170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; ","K00858|3.4e-15|egr:104421503|K00858 NAD+ kinase [EC:2.7.1.23] | (RefSeq) putative NAD kinase 3 isoform X1","--","--","Protein RETICULATA-related","Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a007589mg PE=3 SV=1","S","Function unknown","protein RETICULATA-RELATED 4, chloroplastic-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c97702.graph_c0",893,61.19,1184,76.33,1117,78.5,98,7.05,128,10.56,128,9.15,3.37e-149,-3.477136629,"down","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: cell wall (GO:0005618);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Biological Process: cell wall biogenesis (GO:0042546);; Cellular Component: apoplast (GO:0048046);; Biological Process: cell wall organization (GO:0071555);; ","K08235|8.2e-165|oeu:111395524|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) xyloglucan endotransglucosylase/hydrolase 2-like","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana OX=3702 GN=XTH15 PE=1 SV=1","Xyloglucan endotransglucosylase/hydrolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05939 PE=3 SV=1","G","Carbohydrate transport and metabolism","xyloglucan endotransglucosylase/hydrolase 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576)","--"]
["c106869.graph_c0",210,12.35,200,11.13,159,9.68,1039,64.88,861,61.71,1022,63.23,1.46e-75,2.030726959,"up","[I]","Lipid transport and metabolism ","Molecular Function: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity (GO:0004317);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Molecular Function: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity (GO:0008659);; Molecular Function: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity (GO:0008693);; Molecular Function: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity (GO:0047451);; ","K02372|4.0e-102|oeu:111410708|K02372 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] | (RefSeq) uncharacterized protein LOC111410708","--","--","FabA-like domain;; MaoC like domain","--","(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20396 PE=3 SV=1","I","Lipid transport and metabolism","uncharacterized protein LOC111410708 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c99634.graph_c0",17,1.08,6,0.36,6,0.39,46,2.97,31,2.31,43,2.85,0.00077189,1.61272781,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23871|2.1e-142|oeu:111384309|K23871 putative pectin methylesterase [EC:2.1.1.-] | (RefSeq) uncharacterized protein At3g49720-like","--","--","--","Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1","Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102583825 PE=4 SV=1","S","Function unknown","uncharacterized protein At3g49720-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98477.graph_c0",32,2.94,37,3.41,43,4.9,14,1.22,20,2.2,24,2.01,0.002245378,-1.22342894,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108342.graph_c2",913,29.48,855,26.36,781,26.24,419,14.16,535,20.84,606,20.75,1.81e-19,-1.026271566,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K01179|3.7e-132|vvi:100250178|K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) uncharacterized LOC100250178","--","--","Cellulase (glycosyl hydrolase family 5)","Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1","Mannan endo-1,4-beta-mannosidase OS=Coffea canephora OX=49390 GN=GSCOC_T00038134001 PE=3 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111406301 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Starch and sucrose metabolism (ko00500)"]
["c110146.graph_c1",313,18.2,376,20.68,314,20.27,126,7.59,161,10.53,139,7.97,1.53e-23,-1.539970377,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Holliday junction resolvase MOC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MOC1 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09876 PE=4 SV=1","--","--","Holliday junction resolvase MOC1, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c77550.graph_c0",24,2.96,27,3.13,11,1.39,1022,127.96,1063,152.26,1153,143.3,1.81e-151,5.323560158,"up","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_007267 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111404909 [Olea europaea var. sylvestris]","--","--"]
["c114379.graph_c0",250,3.6,302,3.64,294,4.05,1394,18.35,1106,16.42,1330,17.72,2.05e-74,1.847319615,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: voltage-gated chloride channel activity (GO:0005247);; Molecular Function: nitrate:proton symporter activity (GO:0009671);; Cellular Component: plant-type vacuole membrane (GO:0009705);; Molecular Function: nitrate transmembrane transporter activity (GO:0015112);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","K05016|0.0e+00|oeu:111367043|K05016 chloride channel 7 | (RefSeq) chloride channel protein CLC-b-like","[P]","Inorganic ion transport and metabolism ","Voltage gated chloride channel;; CBS domain;; Voltage gated chloride channel","Chloride channel protein CLC-b OS=Arabidopsis thaliana OX=3702 GN=CLC-B PE=1 SV=1","Chloride channel protein OS=Nicotiana tabacum OX=4097 GN=LOC107777321 PE=3 SV=1","P","Inorganic ion transport and metabolism","chloride channel protein CLC-b-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","--"]
["c109197.graph_c0",148,14.23,180,16.72,134,12.79,44,1.63,65,2.89,67,2.42,3.17e-14,-1.685668056,"down","--","--","--","--","--","--","--","Uncharacterized protein At1g01500 OS=Arabidopsis thaliana OX=3702 GN=At1g01500 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02671 PE=4 SV=1","S","Function unknown","uncharacterized protein At1g01500-like [Olea europaea var. sylvestris]","--","--"]
["c90522.graph_c0",26,5.23,24,3.98,19,3.29,0,0,0,0,0,0,2.24e-09,-5.017730158,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98975.graph_c0",13,0.4,18,0.53,21,0.67,69,2.2,34,1.24,65,2.06,0.001036769,1.296021484,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K05849|1.2e-39|tcc:18613571|K05849 solute carrier family 8 (sodium/calcium exchanger) | (RefSeq) uncharacterized LOC18613571","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At4g22760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E6 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00235 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_00235 [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c109631.graph_c1",44,1.7,60,2.47,39,2.43,7,0.26,13,0.6,17,0.65,1.09e-07,-2.164434749,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.9e-190|tcc:18601350|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.9","[E]","Amino acid transport and metabolism ","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 5.9 OS=Arabidopsis thaliana OX=3702 GN=NPF5.9 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_039172 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 5.8-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c107944.graph_c0",1,0.04,4,0.15,1,0.04,49,1.97,79,3.64,100,4.01,9.14e-15,4.40081407,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K08857|6.0e-162|sind:105172220|K08857 NIMA (never in mitosis gene a)-related kinase 1/4/5 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Nek3 isoform X1","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase Nek1 OS=Arabidopsis thaliana OX=3702 GN=NEK1 PE=2 SV=2","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00656 PE=4 SV=1","T","Signal transduction mechanisms","Serine/threonine protein kinase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c109658.graph_c0",8,0.28,5,0.18,18,0.66,38,1.41,39,1.63,55,2.01,0.000479343,1.640560908,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","K01148|1.1e-50|oeu:111369771|K01148 poly(A)-specific ribonuclease [EC:3.1.13.4] | (RefSeq) uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1","[L]","Replication, recombination and repair ","CRS1 / YhbY (CRM) domain","Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1","CRM domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_037022 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","RNA degradation (ko03018)"]
["c100018.graph_c0",3,0.12,3,0.17,1,0.06,363,13.1,361,14.02,345,11.73,4.37e-44,6.434135673,"up","[V]","Defense mechanisms ","Molecular Function: antiporter activity (GO:0015297);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K03327|3.4e-221|sind:105160450|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 35","[R]","General function prediction only ","MatE","Protein DETOXIFICATION 35 OS=Arabidopsis thaliana OX=3702 GN=DTX35 PE=1 SV=1","Protein DETOXIFICATION OS=Rehmannia glutinosa OX=99300 PE=2 SV=1","V","Defense mechanisms","MATE63 [Rehmannia glutinosa]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c100827.graph_c0",2,0.11,2,0.1,0,0,28,1.5,42,2.57,37,2,2.09e-08,3.747005856,"up","--","--","Biological Process: tubulin complex assembly (GO:0007021);; Biological Process: post-chaperonin tubulin folding pathway (GO:0007023);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: beta-tubulin binding (GO:0048487);; ","--","--","--","Nucleotide-diphospho-sugar transferase","Uncharacterized protein At1g28695 OS=Arabidopsis thaliana OX=3702 GN=At1g28695 PE=2 SV=1","Tubulin-folding cofactor A OS=Nyssa sinensis OX=561372 GN=F0562_018569 PE=3 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein At1g28695-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c106866.graph_c3",9,2.51,10,3.49,11,5.07,35,24.68,37,30.27,34,23.67,0.002208177,1.415841353,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20960 PE=4 SV=1","--","--","uncharacterized protein LOC111391693 [Olea europaea var. sylvestris]","--","--"]
["c110648.graph_c0",77,2.12,74,1.93,61,1.73,14,0.39,44,1.42,51,1.43,0.000484189,-1.2362009,"down","--","--","--","--","--","--","Plant mobile domain","Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1","PMD domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_008809 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111376328 [Olea europaea var. sylvestris]","--","--"]
["c97301.graph_c2",43,2.94,30,1.9,32,2.26,0,0,0,0,4,0.29,4.01e-11,-4.29966699,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c85467.graph_c0",4,1.29,0,0,1,0.39,28,10.94,20,8.59,24,8.09,2.2e-05,2.957451052,"up","--","--","--","K13206|2.9e-18|ghi:107902778|K13206 coiled-coil domain-containing protein 55 | (RefSeq) LOW QUALITY PROTEIN: nuclear speckle splicing regulatory protein 1","--","--","--","Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1","Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0225950 PE=4 SV=1","--","--","uncharacterized protein LOC111412856 [Olea europaea var. sylvestris]","--","--"]
["c111507.graph_c0",1659,25.62,1745,25.39,1476,23.5,880,13.97,762,13.77,842,13.24,6.16e-70,-1.293362432,"down","--","--","--","--","[T]","Signal transduction mechanisms ","T-complex protein 11;; T-complex protein 11","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042522 PE=3 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111388646 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c90825.graph_c0",13,0.36,12,0.32,30,0.87,71,2.03,98,3.22,98,2.8,1.87e-07,1.879187306,"up","--","--","Molecular Function: kinase activity (GO:0016301);; ","K13420|1.1e-09|sind:105167308|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase FLS2","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","--","LRR receptor-like serine/threonine-protein kinase FLS2 OS=Vitis vinifera OX=29760 GN=FLS2_10 PE=4 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase FLS2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c113648.graph_c1",66,2.82,59,2.28,52,2.57,167,8.62,209,13.85,184,9.91,8.6e-10,1.330444328,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: cell wall organization (GO:0071555);; ","K01280|3.8e-12|spen:107013676|K01280 tripeptidyl-peptidase II [EC:3.4.14.10] | (RefSeq) tripeptidyl-peptidase 2-like isoform X1","[M]","Cell wall/membrane/envelope biogenesis ","Pectinacetylesterase","Pectin acetylesterase 12 OS=Arabidopsis thaliana OX=3702 GN=PAE12 PE=2 SV=1","Pectin acetylesterase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12847 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","pectin acetylesterase 12-like isoform X1 [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c95050.graph_c0",2657,273.36,2791,270,2555,268.89,949,101.85,672,82.86,920,97.69,7.28e-143,-1.979843623,"down","[IQ]","--","Molecular Function: beta-ketoacyl-acyl-carrier-protein synthase II activity (GO:0033817);; ","K09458|4.6e-91|oeu:111366101|K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] | (RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like isoform X1","[IQ]","--","Beta-ketoacyl synthase, N-terminal domain","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS2 PE=1 SV=1","3-oxoacyl-(Acyl-carrier-protein) synthase (I and II) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25979 PE=3 SV=1","--","--","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c116264.graph_c0",601,9.66,501,7.32,477,7.85,265,3.75,205,4.37,254,4.55,6.95e-31,-1.444351278,"down","--","--","--","K14772|0.0e+00|oeu:111403069|K14772 U3 small nucleolar RNA-associated protein 20 | (RefSeq) small subunit processome component 20 homolog","[V]","Defense mechanisms ","Down-regulated in metastasis","--","DRIM domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_004266 PE=4 SV=1","V","Defense mechanisms","small subunit processome component 20 homolog [Olea europaea var. sylvestris]","--","--"]
["c93695.graph_c0",7,0.95,2,0.24,3,0.4,73,8.95,105,15.08,129,16.3,1.83e-18,4.066074332,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1","LEA_2 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_029764 PE=4 SV=1","S","Function unknown","NDR1/HIN1-like protein 1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c114741.graph_c2",36,1.39,26,0.92,29,1.2,97,3.93,90,3.96,101,4.12,4e-06,1.308990111,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12337 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c105858.graph_c0",26,1.55,39,2.18,41,2.25,12,0.74,4,0.29,22,1.36,0.000290695,-1.720274261,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c91135.graph_c0",4145,201.34,4621,212.17,4096,204.84,2572,128.37,2194,125.36,2478,123,4.75e-91,-1.149700124,"down","[F]","Nucleotide transport and metabolism ","Biological Process: photosynthesis (GO:0015979);; Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity (GO:0048529);; ","K04035|1.0e-226|oeu:111369306|K04035 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81] | (RefSeq) magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic","--","--","Rubrerythrin","Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=CRD1 PE=2 SV=2","Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase OS=Salvia splendens OX=180675 GN=Saspl_045721 PE=3 SV=1","S","Function unknown","magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","Porphyrin and chlorophyll metabolism (ko00860)"]
["c105914.graph_c0",32,2.21,29,1.96,26,1.81,1,0.07,0,0,1,0.06,2.59e-10,-4.558811668,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c82509.graph_c0",31,4.29,57,7.41,42,5.97,1,0.14,4,0.65,5,0.7,7.47e-12,-3.664724674,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02868|6.4e-69|nau:109208379|K02868 large subunit ribosomal protein L11e | (RefSeq) 60S ribosomal protein L11-1-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L5;; ribosomal L5P family C-terminus","60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2","60S ribosomal protein L11 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpL11 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L11 [Zea mays]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c113399.graph_c0",267,24.02,273,21.25,272,25.06,124,7.52,127,9.11,145,13.66,4.48e-19,-1.351776478,"down","[F]","Nucleotide transport and metabolism ","Molecular Function: adenylate kinase activity (GO:0004017);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: purine nucleotide metabolic process (GO:0006163);; ","K00939|4.2e-84|oeu:111396912|K00939 adenylate kinase [EC:2.7.4.3] | (RefSeq) probable adenylate kinase 7, mitochondrial","[F]","Nucleotide transport and metabolism ","--","Probable adenylate kinase 7, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0118900 PE=2 SV=1","Adenylate kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011097mg PE=3 SV=1","F","Nucleotide transport and metabolism","probable adenylate kinase 7, mitochondrial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","Purine metabolism (ko00230);; Thiamine metabolism (ko00730)"]
["c95542.graph_c0",366,20.8,325,17.25,287,16.57,144,7.82,135,8.05,133,7.15,1.76e-25,-1.557110167,"down","--","--","--","--","--","--","--","Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_005580 PE=4 SV=1","--","--","hypothetical protein Saspl_005580 [Salvia splendens]","--","--"]
["c117025.graph_c1",37,3.74,36,9.71,20,3.07,72,8.23,77,10.4,98,12.64,0.00060684,1.062409133,"up","--","--","--","--","--","--","--","--","--","--","--","proline-rich protein 4-like [Olea europaea var. sylvestris]","--","--"]
["c112855.graph_c1",25,1.52,18,1.03,21,1.82,2,0.72,2,0.14,2,0.71,8.47e-07,-3.222555665,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c104031.graph_c0",17,0.95,26,1.37,19,1.08,85,4.71,108,6.86,114,6.34,3.66e-10,1.938367379,"up","--","--","Molecular Function: double-stranded DNA binding (GO:0003690);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","K15032|9.5e-139|oeu:111403336|K15032 mTERF domain-containing protein, mitochondrial | (RefSeq) transcription termination factor MTEF1, chloroplastic","[KR]","--","mTERF","Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2","Mitochondrial transcription termination factor, mTERF OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13601 PE=3 SV=1","K","Transcription","transcription termination factor MTEF1, chloroplastic [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c105984.graph_c0",53,1.76,59,1.4,35,0.86,351,8.91,368,10.78,422,11.71,3.43e-45,2.61213471,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13430|1.4e-33|dct:110101514|K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07574 PE=4 SV=1","T","Signal transduction mechanisms","protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant-pathogen interaction (ko04626)"]
["c107150.graph_c0",2537,227.67,2897,238.58,2526,231.99,1642,190.09,1433,186.05,1432,159.9,4.31e-54,-1.137828905,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Molecular Function: heme binding (GO:0020037);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: tetrapyrrole binding (GO:0046906);; Molecular Function: obsolete cofactor binding (GO:0048037);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K17278|1.6e-49|oeu:111388690|K17278 membrane-associated progesterone receptor component | (RefSeq) probable steroid-binding protein 3","[R]","General function prediction only ","Cytochrome b5-like Heme/Steroid binding domain","Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1","Membrane-associated progesterone binding protein 2 OS=Artemisia annua OX=35608 GN=CTI12_AA414300 PE=4 SV=1","S","Function unknown","probable steroid-binding protein 3 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020)","--"]
["c109685.graph_c1",1258,58.56,1354,62.07,1353,67.54,894,45.21,759,43.59,814,41.13,3.82e-34,-1.006336005,"down","--","--","--","--","--","--","Protein of unknown function (DUF760)","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004996 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111408559 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c106916.graph_c0",33,2.79,31,1.84,25,1.98,120,3.31,117,5.48,131,4.3,1.32e-10,1.694189548,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114955.graph_c0",23,0.85,25,1.07,15,0.77,78,2.88,78,3.59,82,3.14,1.45e-06,1.556210627,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","K03353|3.0e-290|oeu:111402552|K03353 anaphase-promoting complex subunit 6 | (RefSeq) anaphase-promoting complex subunit 6","[DO]","--","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Anaphase-promoting complex, cyclosome, subunit 3;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; TPR repeat","Anaphase-promoting complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=APC6 PE=2 SV=1","Anaphase-promoting complex (APC), Cdc16 subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11405 PE=4 SV=1","--","--","anaphase-promoting complex subunit 6 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Ubiquitin mediated proteolysis (ko04120)"]
["c91882.graph_c0",0,0,0,0,0,0,36,2.54,38,3.08,23,1.62,4.14e-09,4.937088421,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98458.graph_c0",365,68.75,441,75,314,62.12,1244,258.31,1261,307.82,1385,288.73,4.63e-52,1.474523881,"up","--","--","Cellular Component: ribosome (GO:0005840);; ","K02943|4.7e-13|oeu:111374818|K02943 large subunit ribosomal protein LP2 | (RefSeq) 60S acidic ribosomal protein P2B-like","[J]","Translation, ribosomal structure and biogenesis ","60s Acidic ribosomal protein","60S acidic ribosomal protein P2 OS=Parthenium argentatum OX=35935 PE=3 SV=1","60S acidic ribosomal protein P2-1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110557pilonHSYRG00026 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S acidic ribosomal protein P2-1 [Hibiscus syriacus]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c105068.graph_c0",42,3.23,55,3.69,31,2.23,25,1.55,12,1.07,18,1.01,0.000212573,-1.474279994,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to heat (GO:0009408);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chitin (GO:0010200);; Biological Process: response to organonitrogen compound (GO:0010243);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: host cell nucleus (GO:0042025);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to drug (GO:0042493);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K09419|4.5e-97|oeu:111383844|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor A-3-like","[K]","Transcription ","HSF-type DNA-binding","Heat stress transcription factor A-3 OS=Arabidopsis thaliana OX=3702 GN=HSFA3 PE=1 SV=2","Heat shock transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_329000 PE=3 SV=1","K","Transcription","heat stress transcription factor A-3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c109951.graph_c0",294,28.21,301,27.83,273,28.86,95,5.15,104,7.21,101,5.99,1.05e-31,-1.839896814,"down","--","--","Biological Process: multicellular organism development (GO:0007275);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: unidimensional cell growth (GO:0009826);; Cellular Component: cortical microtubule, transverse to long axis (GO:0010005);; Biological Process: circumnutation (GO:0010031);; ","--","--","--","--","TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOR1L1 PE=2 SV=1","TOG domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_19s0090g00020 PE=4 SV=1","S","Function unknown","microtubule-associated protein TORTIFOLIA1-like [Olea europaea var. sylvestris]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: growth (GO:0040007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080)","--"]
["c93523.graph_c0",71,5.33,105,7.42,87,6.68,5,0.38,14,1.23,10,0.76,9.75e-20,-3.357866418,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","--","--","--","NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV=1","NAC domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04665 PE=4 SV=1","K","Transcription","NAC domain-containing protein 72-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c76099.graph_c0",7,1.02,15,2.05,17,2.53,60,8.93,53,9.04,54,7.97,2.41e-05,1.696754623,"up","--","--","Biological Process: fucose metabolic process (GO:0006004);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K23280|1.3e-18|oeu:111398912|K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) O-fucosyltransferase 3-like","--","--","--","Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT4 PE=1 SV=1","O-fucosyltransferase family protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_197140 PE=3 SV=1","G","Carbohydrate transport and metabolism","O-fucosyltransferase 3-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c104065.graph_c1",1831,162.79,1966,162.22,1629,144.87,728,64.08,569,57.96,670,58.98,9.68e-113,-1.783091651,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K18789|4.0e-17|cic:CICLE_v10010628mg|K18789 xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41] | (RefSeq) hypothetical protein","[RT]","--","Haemolysin-III related","Heptahelical transmembrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=HHP4 PE=2 SV=1","Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102589303 PE=4 SV=1","T","Signal transduction mechanisms","heptahelical transmembrane protein 4-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109605.graph_c1",597,22.89,600,21.54,567,21.63,1639,68.05,1406,66.91,1636,66.4,4.05e-45,1.081991057,"up","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K00924|2.0e-21|gab:108471930|K00924 kinase [EC:2.7.1.-] | (RefSeq) aspartic proteinase-like protein 2 isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Eukaryotic aspartyl protease","Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica OX=39947 GN=ASP1 PE=2 SV=1","Aspartyl protease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27630 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartic proteinase Asp1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c114286.graph_c0",113,7.4,123,7.84,85,6.43,14,0.97,17,1.2,27,2.45,1.14e-19,-2.720993243,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113322.graph_c0",32,1.16,27,0.81,20,0.7,115,2.92,130,3.82,150,3.83,7.66e-13,1.960347941,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K13422|1.4e-26|ppp:112279920|K13422 transcription factor MYC2 | (RefSeq) transcription factor MYC4-like","--","--","Helix-loop-helix DNA-binding domain;; bHLH-MYC and R2R3-MYB transcription factors N-terminal","Transcription factor BHLH42 OS=Actinidia chinensis var. chinensis OX=1590841 GN=BHLH42 PE=1 SV=1","BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_07s0104g00090 PE=4 SV=1","K","Transcription","basic helix-loop-helix protein A [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c104047.graph_c1",18,1.08,21,1.19,19,1.17,6,0.37,4,0.91,14,0.85,0.009224634,-1.476155178,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117229.graph_c0",33,3.78,29,2.43,37,1.68,99,3.16,104,3.94,105,3.1,2.87e-06,1.287640666,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: signal sequence binding (GO:0005048);; Molecular Function: transporter activity (GO:0005215);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: nuclear pore (GO:0005643);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: protein import into nucleus (GO:0006606);; Biological Process: NLS-bearing protein import into nucleus (GO:0006607);; Biological Process: transport (GO:0006810);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: gamete generation (GO:0007276);; Biological Process: protein localization (GO:0008104);; Molecular Function: nuclear localization sequence binding (GO:0008139);; Biological Process: biological_process (GO:0008150);; Molecular Function: obsolete protein transporter activity (GO:0008565);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: cellular process (GO:0009987);; Cellular Component: endomembrane system (GO:0012505);; Biological Process: protein transport (GO:0015031);; Biological Process: peptide transport (GO:0015833);; Biological Process: protein import (GO:0017038);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: cellular process involved in reproduction in multicellular organism (GO:0022412);; Biological Process: reproductive process (GO:0022414);; Cellular Component: cell junction (GO:0030054);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: external encapsulating structure (GO:0030312);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: envelope (GO:0031975);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: multicellular organism reproduction (GO:0032504);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: macromolecule localization (GO:0033036);; Molecular Function: amide binding (GO:0033218);; Biological Process: protein localization to organelle (GO:0033365);; Biological Process: protein localization to nucleus (GO:0034504);; Biological Process: cellular protein localization (GO:0034613);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: peptide binding (GO:0042277);; Biological Process: amide transport (GO:0042886);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: multi-organism reproductive process (GO:0044703);; Biological Process: establishment of protein localization (GO:0045184);; Biological Process: intracellular transport (GO:0046907);; Biological Process: gametophyte development (GO:0048229);; Biological Process: male gamete generation (GO:0048232);; Biological Process: pollen sperm cell differentiation (GO:0048235);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: nuclear transport (GO:0051169);; Biological Process: import into nucleus (GO:0051170);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: cellular localization (GO:0051641);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: multi-organism process (GO:0051704);; Cellular Component: symplast (GO:0055044);; Biological Process: microgametogenesis (GO:0055046);; Molecular Function: nuclear import signal receptor activity (GO:0061608);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: organic substance transport (GO:0071702);; Biological Process: nitrogen compound transport (GO:0071705);; Cellular Component: cell periphery (GO:0071944);; Biological Process: establishment of protein localization to organelle (GO:0072594);; ","K15042|2.5e-10|bna:106398972|K15042 importin subunit alpha-6/7 | (RefSeq) importin subunit alpha-3-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Armadillo/beta-catenin-like repeat","Importin subunit alpha-3 OS=Arabidopsis thaliana OX=3702 GN=IMPA3 PE=1 SV=2","Importin subunit alpha OS=Striga asiatica OX=4170 GN=STAS_10934 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","putative late blight resistance protein homolog R1B-16 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: cell junction (GO:0030054);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; cellular component: symplast (GO:0055044);; biological process: cellular process (GO:0009987);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c109563.graph_c0",3361,133.59,3824,144.64,3497,146.06,2023,79.84,1646,77.58,1865,75.84,2.1e-82,-1.27068213,"down","[R]","General function prediction only ","Molecular Function: hydrolase activity (GO:0016787);; ","K06130|8.7e-111|oeu:111366610|K06130 lysophospholipase II [EC:3.1.1.5] | (RefSeq) acyl-protein thioesterase 2-like","[I]","Lipid transport and metabolism ","Phospholipase/Carboxylesterase;; Serine hydrolase (FSH1)","--","Abhydrolase_2 domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022112001 PE=4 SV=1","I","Lipid transport and metabolism","acyl-protein thioesterase 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Glycerophospholipid metabolism (ko00564)"]
["c84735.graph_c0",0,0,5,1.03,2,0.45,20,4.62,25,6.65,23,5.29,0.000165364,2.548768756,"up","--","--","Molecular Function: beta-galactosidase activity (GO:0004565);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: carbohydrate binding (GO:0030246);; ","K12309|4.9e-13|csat:104781134|K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) beta-galactosidase 2-like","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolases family 35","Beta-galactosidase OS=Solanum lycopersicum OX=4081 PE=1 SV=1","Beta-galactosidase OS=Striga asiatica OX=4170 GN=STAS_31032 PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-galactosidase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Galactose metabolism (ko00052);; Other glycan degradation (ko00511);; Glycosaminoglycan degradation (ko00531);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - ganglio series (ko00604)"]
["c107323.graph_c2",2,0.16,1,0.06,0,0,35,1.81,50,2.91,47,2.26,2.47e-10,4.277530411,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell-cell junction (GO:0005911);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: cell junction (GO:0030054);; Cellular Component: symplast (GO:0055044);; ","--","--","--","F-box-like","F-box protein At1g10780 OS=Arabidopsis thaliana OX=3702 GN=At1g10780 PE=2 SV=1","F-box domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_029012 PE=4 SV=1","S","Function unknown","F-box protein At1g10780 [Olea europaea var. sylvestris]","cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044)","--"]
["c99956.graph_c0",28,0.53,29,0.49,31,0.6,104,2.03,83,1.71,118,2.21,3.6e-07,1.431517211,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K17964|5.2e-12|dosa:Os05t0275100-00|K17964 leucine-rich PPR motif-containing protein, mitochondrial | (RefSeq) Os05g0275100; Pentatricopeptide repeat domain containing protein.","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Mitochondrial 28S ribosomal protein S27;; Tetratricopeptide repeat;; Mitochondrial ATPase expression;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At1g52620 OS=Arabidopsis thaliana OX=3702 GN=At1g52620 PE=2 SV=1","PPR_long domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17283 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g52620, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c99879.graph_c0",49,2.51,76,3.79,64,3.38,224,10.93,214,11.57,320,15.22,9.63e-16,1.654843612,"up","--","--","--","--","--","--","--","--","--","--","--","titin [Olea europaea var. sylvestris]","--","--"]
["c94646.graph_c0",12,0.7,6,0.33,4,0.24,41,2.45,30,2.06,31,1.85,0.000594129,1.757283926,"up","--","--","Molecular Function: ATP transmembrane transporter activity (GO:0005347);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: integral component of membrane (GO:0016021);; ","K05863|4.0e-184|oeu:111385252|K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 | (RefSeq) probable ADP,ATP carrier protein At5g56450","[C]","Energy production and conversion ","Mitochondrial carrier protein","Probable ADP,ATP carrier protein At5g56450 OS=Arabidopsis thaliana OX=3702 GN=At5g56450 PE=2 SV=1","Mitochondrial ADP/ATP carrier protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14145 PE=3 SV=1","C","Energy production and conversion","probable ADP,ATP carrier protein At5g56450 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","--"]
["c43965.graph_c0",2567,294.86,3051,329.76,2789,328.41,270,31.75,237,31.94,254,29.7,0,-3.780154416,"down","--","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; ","--","--","--","Plant invertase/pectin methylesterase inhibitor","Putative invertase inhibitor OS=Platanus acerifolia OX=140101 PE=1 SV=1","PMEI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14419 PE=4 SV=1","S","Function unknown","putative invertase inhibitor [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c112227.graph_c0",14,0.86,12,0.7,9,0.66,32,2.01,46,3.34,38,2.39,0.002811645,1.342436736,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[GE]","--","--","Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana OX=3702 GN=At1g53660 PE=3 SV=2","Organic anion transmembrane transporter OS=Solanum tuberosum OX=4113 PE=4 SV=1","--","--","probable sugar phosphate/phosphate translocator At3g14410 isoform X1 [Solanum lycopersicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c39496.graph_c0",307,63.06,307,58.99,261,54.68,71,14.95,52,12.57,56,11.69,3.85e-48,-2.587829487,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19026 PE=4 SV=1","--","--","uncharacterized protein LOC111386689 [Olea europaea var. sylvestris]","--","--"]
["c111083.graph_c1",1139,19.74,1150,18.96,976,17.52,639,11.37,481,9.86,570,10.16,1.4e-43,-1.270170956,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","C2 domain;; Plant phosphoribosyltransferase C-terminal;; Integral peroxisomal membrane peroxin","FT-interacting protein 3 OS=Arabidopsis thaliana OX=3702 GN=FTIP3 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_006876 PE=3 SV=1","S","Function unknown","FT-interacting protein 1 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109338.graph_c0",33,0.48,21,0.29,13,0.2,169,2.51,221,3.76,241,3.58,1.13e-25,2.857207339,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|1.3e-67|atr:18446750|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1","--","--","Leucine rich repeat;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana OX=3702 GN=GSO1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02999 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase GSO1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108562.graph_c0",63,2.32,89,3.03,73,2.73,27,1.05,12,0.54,13,0.5,9.93e-12,-2.354686178,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_009802 PE=4 SV=1","S","Function unknown","putative WEB family protein At1g65010, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c100793.graph_c0",111,2.84,117,2.83,108,2.82,38,1.07,33,1.1,51,1.43,7.93e-13,-1.760635101,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96759.graph_c0",0,0,2,0.2,1,0.11,30,2.08,32,2.64,41,2.97,1.75e-08,3.928822984,"up","--","--","--","--","--","--","--","--","--","--","--","cactin isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c97204.graph_c0",50,1.49,47,1.35,39,1.19,160,4.79,134,4.74,173,5.26,2.82e-10,1.434310482,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","--","--","--","Double-stranded RNA binding motif","Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1","Putative double-stranded RNA-binding protein 2 OS=Davidia involucrata OX=16924 GN=Din_047650 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","double-stranded RNA-binding protein 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c94038.graph_c0",25,2.43,30,2.73,29,2.81,63,6.26,74,8.34,95,9.31,0.00040359,1.110101733,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","--","--","--","--","Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1","Putative transcription factor TCP20 OS=Davidia involucrata OX=16924 GN=Din_008262 PE=4 SV=1","K","Transcription","transcription factor TCP20-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","--"]
["c114007.graph_c0",87,1.74,66,1.19,63,1.26,275,5.27,319,7.22,368,7.25,5.77e-23,1.815278478,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: O-methyltransferase activity (GO:0008171);; Molecular Function: RNA methyltransferase activity (GO:0008173);; ","K20798|0.0e+00|oeu:111410668|K20798 small RNA 2'-O-methyltransferase [EC:2.1.1.-] | (RefSeq) small RNA 2'-O-methyltransferase-like isoform X1","[S]","Function unknown ","Double-stranded RNA binding domain 2;; Hen1 La-motif C-terminal domain;; Methyltransferase domain;; Methyltransferase domain;; Double-stranded RNA binding motif;; FKBP-type peptidyl-prolyl cis-trans isomerase","Small RNA 2'-O-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=HEN1 PE=1 SV=1","Small RNA 2'-O-methyltransferase OS=Davidia involucrata OX=16924 GN=Din_003360 PE=3 SV=1","S","Function unknown","small RNA 2'-O-methyltransferase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c93604.graph_c0",2,0.07,2,0.07,0,0,18,0.68,34,1.47,62,2.32,4.13e-08,3.76300526,"up","[C]","Energy production and conversion ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: FAD binding (GO:0071949);; ","K22395|1.2e-163|hbr:110646559|K22395 cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | (RefSeq) berberine bridge enzyme-like 13","--","--","FAD binding domain;; Berberine and berberine like","Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana OX=3702 GN=At4g20840 PE=2 SV=1","FAD-binding PCMH-type domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a022353mg PE=3 SV=1","C","Energy production and conversion","berberine bridge enzyme-like 21 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c105104.graph_c1",242,15.3,197,11.76,211,13.54,47,3.47,35,1.96,46,2.38,7.16e-37,-2.639736351,"down","--","--","--","--","--","--","--","--","gag_pre-integrs domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_007500 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein GH714_007500 [Hevea brasiliensis]","--","--"]
["c108231.graph_c0",64,2.67,76,3.55,73,3.57,8,0.2,5,0.19,3,0.08,5.81e-19,-3.831601564,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","K24139|1.1e-130|oeu:111392867|K24139 auxin efflux carrier family protein | (RefSeq) protein PIN-LIKES 3-like isoform X1","[S]","Function unknown ","Membrane transport protein","Protein PIN-LIKES 1 OS=Arabidopsis thaliana OX=3702 GN=PILS1 PE=2 SV=1","Putative membrane protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18854 PE=4 SV=1","L","Replication, recombination and repair","protein PIN-LIKES 3-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c104519.graph_c0",708,13.71,703,12.9,707,14.12,193,3.82,129,2.93,208,4.1,6.36e-80,-2.320302429,"down","[R]","General function prediction only ","Biological Process: immune system process (GO:0002376);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: immune response (GO:0006955);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: cell death (GO:0008219);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular process (GO:0009987);; Biological Process: programmed cell death (GO:0012501);; Cellular Component: membrane (GO:0016020);; Biological Process: signaling (GO:0023052);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: host programmed cell death induced by symbiont (GO:0034050);; Biological Process: response to external biotic stimulus (GO:0043207);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; Biological Process: defense response to other organism (GO:0098542);; ","K13453|3.4e-121|nau:109235474|K13453 disease resistance protein | (RefSeq) putative late blight resistance protein homolog R1A-4","[T]","Signal transduction mechanisms ","NB-ARC domain","Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1","NB-ARC domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a020693mg PE=4 SV=1","T","Signal transduction mechanisms","putative late blight resistance protein homolog R1C-3 [Olea europaea var. sylvestris]","biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c116155.graph_c0",5226,144.08,5271,144.84,4770,136.05,1805,44.48,1429,38.93,1736,41.75,6.81e-232,-1.941954384,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; Cellular Component: PcG protein complex (GO:0031519);; ","K11430|1.9e-234|sot:102598283|K11430 [histone H3]-lysine27 N-trimethyltransferase EZH2 [EC:2.1.1.356] | (RefSeq) histone-lysine N-methyltransferase EZA1","[K]","Transcription ","CXC domain","Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana OX=3702 GN=EZA1 PE=1 SV=1","[Histone H3]-lysine(27) N-trimethyltransferase OS=Davidia involucrata OX=16924 GN=Din_037358 PE=4 SV=1","K","Transcription","histone-lysine N-methyltransferase EZA1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Lysine degradation (ko00310)"]
["c103633.graph_c1",0,0,0,0,0,0,99,14.94,111,18.76,139,20.68,1.85e-18,6.568835236,"up","--","--","--","--","--","--","--","--","Putative transcription factor & lipid binding HD-SAD family OS=Lupinus albus OX=3870 GN=Lalb_Chr15g0088751 PE=3 SV=1","--","--","putative transcription factor & lipid binding HD-SAD family [Lupinus albus]","--","--"]
["c103532.graph_c1",2,0.21,1,0.1,1,0.11,16,0.94,22,1.44,21,1.53,7.09e-05,2.915395652,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K12447|1.1e-25|boe:106336398|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC106336398","[R]","General function prediction only ","--","--","Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3420 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111386213, partial [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c94476.graph_c0",0,0,0,0,2,0.27,149,15.59,210,25.21,224,23.51,6.12e-26,6.54845696,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06920 PE=4 SV=1","--","--","uncharacterized protein LOC111384518 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101136.graph_c0",145,5.15,126,4.26,119,4.35,35,1.28,33,1.39,45,1.64,4.69e-18,-2.079796502,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109578.graph_c0",3,0.33,10,1.03,8,0.9,32,3.58,24,3.08,32,3.55,0.00260262,1.605575522,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108266.graph_c0",33,0.97,28,0.81,28,0.92,4,0.32,6,0.51,3,0.09,1.51e-07,-2.824984189,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein of unknown function (DUF1218)","--","Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101266181 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111396512 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103801.graph_c1",206,10.07,198,12.79,207,10.57,110,7.11,91,5.2,97,5.26,1.49e-14,-1.348854331,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c36859.graph_c0",38,10.54,39,10.08,39,10.99,1,0.28,5,1.64,7,1.97,4.24e-10,-3.209170836,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103003.graph_c0",23,3.21,20,2.62,12,1.72,103,14.73,63,10.34,96,13.63,3.3e-08,1.864960948,"up","--","--","Molecular Function: ADP binding (GO:0043531);; ","--","--","--","Leucine Rich repeats (2 copies)","--","NB-ARC domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06991 PE=4 SV=1","T","Signal transduction mechanisms","putative disease resistance RPP13-like protein 1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c89651.graph_c0",33,3.39,70,6.89,39,4.18,8,0.82,30,3.44,13,1.37,0.000233161,-1.663942925,"down","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; ","K02937|6.8e-63|mus:103970684|K02937 large subunit ribosomal protein L7e | (RefSeq) 60S ribosomal protein L7-2-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L30p/L7e;; Ribosomal L30 N-terminal domain","60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1","60S ribosomal protein L7 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpL7 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L7-like [Rhodamnia argentea]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c103115.graph_c0",1205,117.25,1284,115.53,1224,122.93,3625,386.31,3596,436.71,4072,435.05,2.1e-96,1.280258654,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: small ribosomal subunit (GO:0015935);; ","K02989|5.3e-93|oeu:111409126|K02989 small subunit ribosomal protein S5e | (RefSeq) 40S ribosomal protein S5-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S7p/S5e","40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1","Ribosomal protein S7 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07111 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","40S ribosomal protein S5-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c109688.graph_c0",19,3.03,4,0.6,5,0.82,32,5.92,34,6.93,41,7.3,0.004323886,1.490934247,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K08857|5.1e-33|sind:105171014|K08857 NIMA (never in mitosis gene a)-related kinase 1/4/5 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Nek5 isoform X1","[R]","General function prediction only ","Protein kinase domain","Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK4 PE=2 SV=1","Serine/threonine-protein kinase OS=Striga asiatica OX=4170 GN=STAS_17596 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase Nek5 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c98290.graph_c0",2,0.34,4,0.63,1,0.17,16,2.75,20,3.95,19,3.25,0.001107506,2.269715622,"up","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Cellular Component: protein-containing complex (GO:0032991);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; Cellular Component: catalytic complex (GO:1902494);; Cellular Component: transferase complex (GO:1990234);; ","K18643|2.2e-09|fve:101302644|K18643 katanin p80 WD40 repeat-containing subunit B1 | (RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog","[D]","Cell cycle control, cell division, chromosome partitioning ","--","Katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 OS=Arabidopsis thaliana OX=3702 GN=KTN80.3 PE=1 SV=1","WD_REPEATS_REGION domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_228030 PE=4 SV=1","Z","Cytoskeleton","unnamed protein product [Arabidopsis thaliana]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","--"]
["c91467.graph_c0",22,1.7,29,2.41,23,2.66,0,0,0,0,0,0,8.56e-10,-5.111261859,"down","--","--","--","--","--","--","DM4/DM12 family","--","--","--","--","protein henna-like [Rhodamnia argentea]","--","--"]
["c112843.graph_c0",465,16.11,425,13.84,317,11.53,1480,48.03,1339,51.88,1582,53.88,3.19e-55,1.541301094,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K08869|1.7e-30|cre:CHLREDRAFT_165812|K08869 aarF domain-containing kinase | (RefSeq) predicted protein","[O]","Posttranslational modification, protein turnover, chaperones ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1","Zuotin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02234 PE=4 SV=1","K","Transcription","transcription factor DIVARICATA-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c78899.graph_c1",178,55.67,211,61.13,207,65.71,35,12.68,40,16.67,34,12.17,8.92e-36,-2.734145661,"down","--","--","Molecular Function: serine-type endopeptidase inhibitor activity (GO:0004867);; ","--","--","--","Potato type II proteinase inhibitor family","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031441001 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111394395 [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c92316.graph_c0",29,2.11,36,2.47,20,1.66,230,17.1,233,19.85,279,20.62,2.56e-33,2.764153417,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02873|1.1e-89|oeu:111379850|K02873 large subunit ribosomal protein L13e | (RefSeq) 60S ribosomal protein L13-1-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L13e","60S ribosomal protein L13-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13B PE=1 SV=1","60S ribosomal protein L13 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24706 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L13-1-like [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c96732.graph_c0",452,25.73,526,28.34,456,27.1,161,8.95,136,9.29,176,9.41,1.11e-51,-1.916132875,"down","--","--","--","K12761|3.5e-45|ini:109164801|K12761 carbon catabolite-derepressing protein kinase [EC:2.7.11.1] | (RefSeq) CBL-interacting serine/threonine-protein kinase 7-like","--","--","Domain of unknown function (DUF4228)","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_047208 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111384465 [Olea europaea var. sylvestris]","--","--"]
["c110340.graph_c0",2,0.1,0,0,0,0,21,0.9,35,1.4,37,1.45,5.6e-08,4.059392386,"up","--","--","--","--","[P]","Inorganic ion transport and metabolism ","Domain of unknown function (DUF966)","Protein UPSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=UFC PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02115 PE=4 SV=1","P","Inorganic ion transport and metabolism","uncharacterized protein LOC111411033 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c92155.graph_c0",16,1.06,18,1.74,12,0.68,57,3.19,47,3.21,54,3.38,0.000243884,1.40314302,"up","--","--","Molecular Function: hydrolase activity (GO:0016787);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; ","K24221|3.9e-28|cmo:103490810|K24221 type I inositol polyphosphate 5-phosphatase IP5P1/2 [EC:3.1.3.56] | (RefSeq) type I inositol polyphosphate 5-phosphatase 2","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Type IV inositol polyphosphate 5-phosphatase 7 OS=Arabidopsis thaliana OX=3702 GN=IP5P7 PE=1 SV=1","IPPc domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_022168 PE=3 SV=1","T","Signal transduction mechanisms","type IV inositol polyphosphate 5-phosphatase 7-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Inositol phosphate metabolism (ko00562)"]
["c113576.graph_c0",28,0.71,27,0.65,26,0.68,10,0.26,8,0.24,16,0.41,0.001595362,-1.491421954,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116293.graph_c1",29,0.76,21,0.53,20,0.55,9,0.25,4,0.12,13,0.35,0.001969895,-1.634628903,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92447.graph_c0",1733,81.76,1807,80.64,1799,87.23,635,30.45,552,30.33,645,30.78,2.62e-137,-1.865620318,"down","[E]","Amino acid transport and metabolism ","Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: glycine biosynthetic process from serine (GO:0019264);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: methylation (GO:0032259);; Biological Process: tetrahydrofolate interconversion (GO:0035999);; ","K00600|4.1e-223|oeu:111409073|K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] | (RefSeq) serine hydroxymethyltransferase, mitochondrial","[E]","Amino acid transport and metabolism ","Serine hydroxymethyltransferase","Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei OX=4226 PE=2 SV=1","Serine hydroxymethyltransferase OS=Nicotiana tabacum OX=4097 GN=LOC107792415 PE=3 SV=1","E","Amino acid transport and metabolism","serine hydroxymethyltransferase, mitochondrial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Glycine, serine and threonine metabolism (ko00260);; Cyanoamino acid metabolism (ko00460);; Glyoxylate and dicarboxylate metabolism (ko00630);; One carbon pool by folate (ko00670);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c116231.graph_c1",759,15.42,755,13.67,728,16.69,3056,54.49,2588,46.13,3089,54.58,1.97e-131,1.634357234,"up","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05666|0.0e+00|oeu:111406124|K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2 | (RefSeq) ABC transporter C family member 10-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter;; ABC transporter transmembrane region;; P-loop containing region of AAA domain;; AAA domain, putative AbiEii toxin, Type IV TA system;; 50S ribosome-binding GTPase","ABC transporter C family member 10 OS=Arabidopsis thaliana OX=3702 GN=ABCC10 PE=2 SV=2","Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08266 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter C family member 10-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c110440.graph_c1",4045,142.03,4366,144.02,3886,138.57,1666,66.84,1379,62.05,1730,68.14,5.81e-189,-1.688297653,"down","--","--","Biological Process: cell cycle checkpoint (GO:0000075);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: RNA splicing, via transesterification reactions (GO:0000375);; Biological Process: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile (GO:0000377);; Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: spliceosomal complex (GO:0005681);; Cellular Component: U2-type spliceosomal complex (GO:0005684);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: RNA processing (GO:0006396);; Biological Process: mRNA processing (GO:0006397);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell cycle (GO:0007049);; Biological Process: regulation of mitotic nuclear division (GO:0007088);; Biological Process: mitotic cell cycle checkpoint (GO:0007093);; Biological Process: mitotic spindle assembly checkpoint (GO:0007094);; Biological Process: regulation of mitotic cell cycle (GO:0007346);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA splicing (GO:0008380);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of cell cycle process (GO:0010564);; Biological Process: negative regulation of organelle organization (GO:0010639);; Biological Process: negative regulation of cell cycle process (GO:0010948);; Biological Process: regulation of mitotic sister chromatid separation (GO:0010965);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: mRNA metabolic process (GO:0016071);; Biological Process: cell cycle process (GO:0022402);; Biological Process: regulation of mitotic metaphase/anaphase transition (GO:0030071);; Biological Process: spindle checkpoint (GO:0031577);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: regulation of organelle organization (GO:0033043);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: regulation of sister chromatid segregation (GO:0033045);; Biological Process: negative regulation of sister chromatid segregation (GO:0033046);; Biological Process: regulation of mitotic sister chromatid segregation (GO:0033047);; Biological Process: negative regulation of mitotic sister chromatid segregation (GO:0033048);; Biological Process: protein localization to organelle (GO:0033365);; Biological Process: protein localization to kinetochore (GO:0034501);; Biological Process: protein localization to chromosome (GO:0034502);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of cell cycle (GO:0045786);; Biological Process: negative regulation of mitotic nuclear division (GO:0045839);; Biological Process: negative regulation of mitotic metaphase/anaphase transition (GO:0045841);; Biological Process: negative regulation of mitotic cell cycle (GO:0045930);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: negative regulation of cellular component organization (GO:0051129);; Biological Process: localization (GO:0051179);; Biological Process: cellular localization (GO:0051641);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of nuclear division (GO:0051783);; Biological Process: negative regulation of nuclear division (GO:0051784);; Biological Process: regulation of chromosome segregation (GO:0051983);; Biological Process: negative regulation of chromosome segregation (GO:0051985);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: cellular macromolecule localization (GO:0070727);; Cellular Component: U2-type precatalytic spliceosome (GO:0071005);; Cellular Component: precatalytic spliceosome (GO:0071011);; Biological Process: spindle assembly checkpoint (GO:0071173);; Biological Process: mitotic spindle checkpoint (GO:0071174);; Biological Process: protein localization to chromosome, centromeric region (GO:0071459);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: regulation of cell cycle phase transition (GO:1901987);; Biological Process: negative regulation of cell cycle phase transition (GO:1901988);; Biological Process: regulation of mitotic cell cycle phase transition (GO:1901990);; Biological Process: negative regulation of mitotic cell cycle phase transition (GO:1901991);; Biological Process: regulation of metaphase/anaphase transition of cell cycle (GO:1902099);; Biological Process: negative regulation of metaphase/anaphase transition of cell cycle (GO:1902100);; Biological Process: mitotic cell cycle process (GO:1903047);; Biological Process: regulation of chromosome separation (GO:1905818);; Biological Process: negative regulation of chromosome separation (GO:1905819);; Cellular Component: ribonucleoprotein complex (GO:1990904);; Biological Process: negative regulation of mitotic sister chromatid separation (GO:2000816);; Biological Process: negative regulation of chromosome organization (GO:2001251);; ","K13109|9.3e-157|oeu:111366088|K13109 IK cytokine | (RefSeq) suppressor of mec-8 and unc-52 protein homolog 2-like","[T]","Signal transduction mechanisms ","RED-like protein C-terminal region;; RED-like protein N-terminal region;; RED-like protein N-terminal region","Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SMU2 PE=1 SV=1","Suppressor of mec-8 and unc-52 protein2 OS=Dorcoceras hygrometricum OX=472368 GN=F511_37938 PE=3 SV=1","T","Signal transduction mechanisms","suppressor of mec-8 and unc-52 protein homolog 2-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: single-organism process (GO:0044699);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991);; biological process: localization (GO:0051179)","--"]
["c108348.graph_c0",93,3.74,79,3.85,65,2.49,261,12.86,325,15.2,365,17.31,2.24e-19,1.668731289,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);; ","K19355|1.3e-169|oeu:111392942|K19355 mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] | (RefSeq) mannan endo-1,4-beta-mannosidase 6-like isoform X1","--","--","Cellulase (glycosyl hydrolase family 5)","Mannan endo-1,4-beta-mannosidase 6 OS=Arabidopsis thaliana OX=3702 GN=MAN6 PE=2 SV=1","Mannan endo-1,4-beta-mannosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12931 PE=3 SV=1","G","Carbohydrate transport and metabolism","mannan endo-1,4-beta-mannosidase 6-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Fructose and mannose metabolism (ko00051)"]
["c106755.graph_c0",2,0.08,2,0.07,4,0.16,48,1.87,48,2.15,41,1.6,1.55e-09,3.403479363,"up","--","--","--","--","--","--","Protein of unknown function (DUF740)","Protein OCTOPUS-like OS=Arabidopsis thaliana OX=3702 GN=OPSL1 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28548 PE=4 SV=1","S","Function unknown","UPF0503 protein At3g09070, chloroplastic-like [Olea europaea var. sylvestris]","--","--"]
["c93320.graph_c0",20,1.04,27,1.32,22,1.17,95,5.04,102,6.2,92,4.85,1.45e-08,1.707920205,"up","[R]","General function prediction only ","--","--","--","--","--","protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1","TPR_REGION domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29738 PE=4 SV=1","S","Function unknown","protein SLOW GREEN 1, chloroplastic-like [Olea europaea var. sylvestris]","--","--"]
["c108750.graph_c2",2236,289.48,2524,309.28,2193,291.06,1356,198.94,1345,221.41,1524,217.24,1.36e-58,-1.039167757,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92720.graph_c0",14,0.59,8,0.32,13,0.57,41,1.78,34,1.69,62,2.68,0.00040688,1.544020202,"up","--","--","Molecular Function: kinase activity (GO:0016301);; ","--","[R]","General function prediction only ","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","--","Putative LRR receptor-like serine/threonine-protein kinase-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_41916 PE=4 SV=1","S","Function unknown","putative LRR receptor-like serine/threonine-protein kinase-like [Dorcoceras hygrometricum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c84588.graph_c0",2,0.59,2,0.74,1,0.2,31,9.83,23,7.05,37,9.82,5.42e-07,3.302475558,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92627.graph_c0",4,0.47,5,0.54,3,0.2,19,2.14,14,1.87,29,3.05,0.004346147,1.80279026,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: integral component of membrane (GO:0016021);; ","K04374|1.0e-08|dosa:Os01t0211800-01|K04374 cyclic AMP-dependent transcription factor ATF-4 | (RefSeq) Os01g0211800; Similar to VirE2-interacting protein VIP1.","--","--","--","Basic leucine zipper 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BZIP02 PE=2 SV=1","BZIP transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001230 PE=4 SV=1","K","Transcription","basic leucine zipper 61 [Arachis duranensis]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Protein processing in endoplasmic reticulum (ko04141)"]
["c94731.graph_c0",38,4.12,43,4.39,24,2.67,5,0.55,6,0.76,6,0.66,4.41e-08,-2.727793866,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c83112.graph_c0",2,0.16,0,0,0,0,18,1.52,26,2.51,25,2.09,2.48e-06,3.656700257,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09286|8.2e-81|oeu:111368854|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor ERF011-like","--","--","AP2 domain","Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1","AP2/ERF domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29839 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor ERF011-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c94116.graph_c1",422,32.18,479,34.16,474,36.95,278,20.36,214,17.95,282,20.26,7.05e-21,-1.152339287,"down","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; ","--","[S]","Function unknown ","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_022823 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111410219 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c109629.graph_c0",41,1.67,31,1.19,23,0.96,3,0.12,11,0.52,21,0.87,0.001204796,-1.646703832,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99917.graph_c2",22,1.01,18,0.81,16,1.38,56,3.3,37,2.7,63,3.86,0.003838142,1.102147026,"up","--","--","--","K22381|1.8e-189|oeu:111373192|K22381 E3 ubiquitin-protein ligase ZNF598 [EC:2.3.2.27] | (RefSeq) uncharacterized protein LOC111373192","[O]","Posttranslational modification, protein turnover, chaperones ","--","--","RING-type E3 ubiquitin transferase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001283mg PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111373192 [Olea europaea var. sylvestris]","--","--"]
["c111155.graph_c0",2262,178.2,2534,187.36,2374,191.38,1313,103.57,1045,92.32,1164,90.64,7.94e-73,-1.347085584,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105108.graph_c0",280,11.87,265,10.66,213,9.15,1625,73.04,1847,95.05,2080,93.94,2.97e-130,2.54495835,"up","[I]","Lipid transport and metabolism ","Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (GO:0016717);; ","K10257|2.4e-180|oeu:111401332|K10257 acyl-lipid omega-3 desaturase [EC:1.14.19.25 1.14.19.35 1.14.19.36] | (RefSeq) omega-3 fatty acid desaturase, endoplasmic reticulum-like","--","--","Domain of unknown function (DUF3474);; Fatty acid desaturase;; Fatty acid desaturase","Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum OX=4182 GN=FAD7 PE=2 SV=1","Microsomal omega-3 fatty acid desaturase OS=Olea europaea OX=4146 GN=FAD3B PE=2 SV=1","I","Lipid transport and metabolism","omega-3 fatty acid desaturase, endoplasmic reticulum-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c109029.graph_c0",12,0.39,2,0.06,2,0.06,17,0.57,35,1.36,38,1.22,0.001364701,1.945042909,"up","--","--","--","--","--","--","Leucine-zipper of ternary complex factor MIP1;; Protein of unknown function, DUF547;; Protein of unknown function, DUF547","--","uncharacterized protein LOC107780841 OS=Nicotiana tabacum OX=4097 GN=LOC107780841 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111393842 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c110891.graph_c0",50,2.65,47,2.94,21,1.06,115,7.19,122,9.68,156,10.57,4.97e-07,1.389179736,"up","--","--","Biological Process: protein polyubiquitination (GO:0000209);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631);; ","K06689|1.1e-80|oeu:111381750|K06689 ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 28-like isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1","UBC core domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015733mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin-conjugating enzyme E2 28-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)","Ubiquitin mediated proteolysis (ko04120);; Protein processing in endoplasmic reticulum (ko04141)"]
["c111285.graph_c1",1381,46.68,1654,51.46,1546,53.04,739,24.7,576,22.19,708,23.47,2.72e-67,-1.501964958,"down","--","--","Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; ","K16277|5.9e-154|oeu:111391411|K16277 E3 ubiquitin-protein ligase DRIP [EC:2.3.2.27] | (RefSeq) E3 ubiquitin protein ligase DRIP2-like","[S]","Function unknown ","--","E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1","Putative E3 ubiquitin protein ligase DRIP2 OS=Davidia involucrata OX=16924 GN=Din_011739 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin protein ligase DRIP2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c88603.graph_c0",27,1.91,29,1.94,42,3.06,0,0,0,0,0,0,1.55e-11,-5.475711552,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c93436.graph_c0",233,11.91,260,12.68,211,11.26,47,2.52,58,3.46,75,3.99,2.05e-32,-2.267014896,"down","[R]","General function prediction only ","Molecular Function: alcohol dehydrogenase (NAD+) activity (GO:0004022);; Molecular Function: zinc ion binding (GO:0008270);; ","K00001|1.1e-104|oeu:111371759|K00001 alcohol dehydrogenase [EC:1.1.1.1] | (RefSeq) alcohol dehydrogenase-like 4 isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Alcohol dehydrogenase GroES-like domain;; Zinc-binding dehydrogenase","Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g64710 PE=2 SV=1","Alcohol dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19026 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","alcohol dehydrogenase-like 4 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Glycolysis / Gluconeogenesis (ko00010);; Fatty acid degradation (ko00071);; Tyrosine metabolism (ko00350)"]
["c96588.graph_c0",257,20.41,289,22.39,268,23.33,29,2.18,38,3.63,53,4.1,7.05e-52,-3.052642557,"down","--","--","Molecular Function: protein phosphatase inhibitor activity (GO:0004864);; Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Molecular Function: abscisic acid binding (GO:0010427);; Molecular Function: signaling receptor activity (GO:0038023);; ","K05387|2.3e-12|peq:110030824|K05387 glutamate receptor, ionotropic, plant | (RefSeq) LOW QUALITY PROTEIN: glutamate receptor 2.3-like","--","--","Pathogenesis-related protein Bet v 1 family","Major strawberry allergen Fra a 1.06 OS=Fragaria ananassa OX=3747 GN=Fra a 1.06 PE=1 SV=1","Bet_v_1 domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_000264 PE=3 SV=1","H","Coenzyme transport and metabolism","major allergen Pru ar 1-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089)","--"]
["c94985.graph_c2",216,14.11,215,13.38,204,13.79,1666,112.01,1495,114.83,1722,114.72,7.43e-180,2.613151858,"up","--","--","Cellular Component: chloroplast (GO:0009507);; ","K03542|1.6e-137|oeu:111381850|K03542 photosystem II 22kDa protein | (RefSeq) photosystem II 22 kDa protein, chloroplastic","--","--","Chlorophyll A-B binding protein","Photosystem II 22 kDa protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PSBS PE=3 SV=1","Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003551 PE=4 SV=1","C","Energy production and conversion","photosystem II 22 kDa protein, chloroplastic [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Photosynthesis (ko00195)"]
["c115577.graph_c0",7,0.14,5,0.1,1,0.02,33,0.73,48,1.19,49,1.08,2.12e-07,2.759493394,"up","--","--","--","K12821|1.0e-24|cann:107846076|K12821 pre-mRNA-processing factor 40 | (RefSeq) pre-mRNA-processing protein 40A-like","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05538 PE=4 SV=1","--","--","outer dense fiber protein 2 [Olea europaea var. sylvestris]","--","Spliceosome (ko03040)"]
["c108988.graph_c0",31,4.23,30,4.35,35,5.21,19,3.33,9,1.67,18,2.35,0.002224105,-1.329051711,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97047.graph_c0",4,0.38,2,0.15,12,0.94,42,3.86,35,3.73,68,6.16,1.69e-06,2.453518347,"up","--","--","--","K20456|1.1e-84|oeu:111382182|K20456 oxysterol-binding protein 1 | (RefSeq) oxysterol-binding protein-related protein 2B-like isoform X1","[I]","Lipid transport and metabolism ","Pleckstrin homology domain;; PH domain","Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana OX=3702 GN=ORP2A PE=2 SV=1","Oxysterol-binding protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22073 PE=4 SV=1","I","Lipid transport and metabolism","oxysterol-binding protein-related protein 2B-like isoform X3 [Olea europaea var. sylvestris]","--","--"]
["c108066.graph_c3",33,2.83,44,2.58,42,2.65,14,0.88,23,3.2,12,0.77,0.000235735,-1.515347872,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: defense response (GO:0006952);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; Molecular Function: ADP binding (GO:0043531);; ","K12393|2.7e-21|aof:109845736|K12393 AP-1 complex subunit mu | (RefSeq) LOW QUALITY PROTEIN: AP-1 complex subunit mu-2-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Zinc knuckle","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Oryza brachyantha OX=4533 PE=3 SV=1","T","Signal transduction mechanisms","OSJNBa0033G05.13 [Oryza sativa Japonica Group]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c104121.graph_c0",95,4.72,73,3.66,53,2.58,195,9.47,240,14.72,262,13.64,3.33e-10,1.323607674,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","B3 DNA binding domain","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00011586001 PE=4 SV=1","K","Transcription","B3 domain-containing protein At3g18960-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c95944.graph_c0",20,0.39,14,0.26,10,0.2,37,0.75,34,0.77,62,1.22,0.005283969,1.202023374,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K22262|3.9e-141|qsu:112034235|K22262 WD repeat and FYVE domain-containing protein 3 | (RefSeq) protein SPIRRIG","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; DYW family of nucleic acid deaminases;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1","DYW_deaminase domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01849 PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At2g27610 [Sesamum indicum]","molecular function: binding (GO:0005488)","--"]
["c114795.graph_c1",31681,790.43,33478,793.75,31887,821.56,20288,515.53,16010,464.6,18147,458.55,3.44e-86,-1.15722872,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: ATP binding (GO:0005524);; Biological Process: protein folding (GO:0006457);; Biological Process: protein refolding (GO:0042026);; ","K04077|2.5e-294|vvi:100261815|K04077 chaperonin GroEL | (RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic","[O]","Posttranslational modification, protein turnover, chaperones ","TCP-1/cpn60 chaperonin family","Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B1 PE=1 SV=3","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03930 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Coffea arabica]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)","RNA degradation (ko03018)"]
["c99831.graph_c1",75,3.76,82,3.77,103,5.27,16,1.13,14,1.07,22,1.53,1.23e-15,-2.578728101,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107935.graph_c0",50,2.01,48,1.79,55,2.28,121,4.72,138,6.14,151,5.82,4.15e-06,1.082037405,"up","--","--","--","--","--","--","--","--","BRO1 domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_22100 PE=4 SV=1","S","Function unknown","programmed cell death 6-interacting protein [Olea europaea var. sylvestris]","--","--"]
["c116087.graph_c0",1716,40,1869,41.58,1635,39.06,423,10.93,477,13.61,480,12.69,4.93e-161,-2.234188161,"down","[V]","Defense mechanisms ","Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: transporter activity (GO:0005215);; Molecular Function: ion channel activity (GO:0005216);; Molecular Function: voltage-gated ion channel activity (GO:0005244);; Molecular Function: anion channel activity (GO:0005253);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: transport (GO:0006810);; Biological Process: ion transport (GO:0006811);; Biological Process: anion transport (GO:0006820);; Biological Process: chloride transport (GO:0006821);; Biological Process: cellular ion homeostasis (GO:0006873);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: biological_process (GO:0008150);; Molecular Function: voltage-gated anion channel activity (GO:0008308);; Molecular Function: anion transmembrane transporter activity (GO:0008509);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cellular process (GO:0009987);; Biological Process: response to inorganic substance (GO:0010035);; Molecular Function: ion transmembrane transporter activity (GO:0015075);; Molecular Function: inorganic anion transmembrane transporter activity (GO:0015103);; Molecular Function: channel activity (GO:0015267);; Molecular Function: inorganic molecular entity transmembrane transporter activity (GO:0015318);; Biological Process: inorganic anion transport (GO:0015698);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular homeostasis (GO:0019725);; Molecular Function: passive transmembrane transporter activity (GO:0022803);; Molecular Function: voltage-gated channel activity (GO:0022832);; Molecular Function: gated channel activity (GO:0022836);; Molecular Function: channel activity (GO:0022838);; Molecular Function: ion gated channel activity (GO:0022839);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: ion transmembrane transport (GO:0034220);; Biological Process: response to chemical (GO:0042221);; Biological Process: homeostatic process (GO:0042592);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: chemical homeostasis (GO:0048878);; Biological Process: ion homeostasis (GO:0050801);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: cellular chemical homeostasis (GO:0055082);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Cellular Component: cell periphery (GO:0071944);; Biological Process: anion transmembrane transport (GO:0098656);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","Voltage-dependent anion channel","S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1","Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_03289 PE=3 SV=1","S","Function unknown","S-type anion channel SLAH2-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425)","--"]
["c115435.graph_c0",40,1.28,23,0.68,16,0.56,167,5.23,214,7.79,258,8.01,1.34e-22,2.640164384,"up","[N]","Cell motility ","Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: mitotic cytokinesis (GO:0000281);; Biological Process: cytokinesis (GO:0000910);; Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cell cycle (GO:0007049);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: glucan biosynthetic process (GO:0009250);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: plant-type primary cell wall biogenesis (GO:0009833);; Biological Process: plant-type secondary cell wall biogenesis (GO:0009834);; Biological Process: cellular process (GO:0009987);; Biological Process: response to inorganic substance (GO:0010035);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: cellulose synthase activity (GO:0016759);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellulose metabolic process (GO:0030243);; Biological Process: cellulose biosynthetic process (GO:0030244);; Cellular Component: external encapsulating structure (GO:0030312);; Biological Process: cellular polysaccharide biosynthetic process (GO:0033692);; Biological Process: cellular carbohydrate biosynthetic process (GO:0034637);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Molecular Function: UDP-glucosyltransferase activity (GO:0035251);; Biological Process: response to chemical (GO:0042221);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: glucan metabolic process (GO:0044042);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: cellular polysaccharide metabolic process (GO:0044264);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: glucosyltransferase activity (GO:0046527);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Biological Process: beta-glucan metabolic process (GO:0051273);; Biological Process: beta-glucan biosynthetic process (GO:0051274);; Biological Process: cell division (GO:0051301);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cytoskeleton-dependent cytokinesis (GO:0061640);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Biological Process: defense response to other organism (GO:0098542);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: mitotic cell cycle process (GO:1903047);; ","K10999|0.0e+00|oeu:111412157|K10999 cellulose synthase A [EC:2.4.1.12] | (RefSeq) cellulose synthase A catalytic subunit 8 [UDP-forming]","--","--","Cellulose synthase;; Cellulose synthase","Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica OX=39946 GN=CESA4 PE=2 SV=2","Cellulose synthase OS=Paulownia fortunei OX=586722 GN=Ces8 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","cellulose synthase A catalytic subunit 8 [UDP-forming] [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c104451.graph_c0",0,0,0,0,0,0,43,7.4,54,10.65,44,7.51,1.97e-11,5.427818113,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c86916.graph_c0",20,0.66,49,1.72,18,0.76,1,0.04,8,0.39,7,0.25,2e-05,-2.470758757,"down","[L]","Replication, recombination and repair ","Biological Process: reproduction (GO:0000003);; Biological Process: RNA splicing, via transesterification reactions (GO:0000375);; Biological Process: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile (GO:0000377);; Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: double-stranded DNA binding (GO:0003690);; Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA helicase activity (GO:0003724);; Molecular Function: double-stranded RNA binding (GO:0003725);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: RNA helicase activity (GO:0004004);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: binding (GO:0005488);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: spliceosomal complex (GO:0005681);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: RNA processing (GO:0006396);; Biological Process: mRNA processing (GO:0006397);; Biological Process: RNA localization (GO:0006403);; Biological Process: RNA export from nucleus (GO:0006405);; Biological Process: mRNA export from nucleus (GO:0006406);; Biological Process: protein export from nucleus (GO:0006611);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: transport (GO:0006810);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: response to stress (GO:0006950);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: multicellular organism development (GO:0007275);; Molecular Function: helicase activity (GO:0008026);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: RNA-dependent ATPase activity (GO:0008186);; Biological Process: RNA splicing (GO:0008380);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: pollen development (GO:0009555);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: flower development (GO:0009908);; Biological Process: cellular process (GO:0009987);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to metal ion (GO:0010038);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: RNA secondary structure unwinding (GO:0010501);; Biological Process: protein transport (GO:0015031);; Biological Process: peptide transport (GO:0015833);; Biological Process: nucleobase-containing compound transport (GO:0015931);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: mRNA metabolic process (GO:0016071);; Molecular Function: pyrophosphatase activity (GO:0016462);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on acid anhydrides (GO:0016817);; Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Cellular Component: cell junction (GO:0030054);; Biological Process: protein-containing complex localization (GO:0031503);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: response to chemical (GO:0042221);; Molecular Function: ATPase activity (GO:0042623);; Biological Process: amide transport (GO:0042886);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: establishment of protein localization (GO:0045184);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: response to cadmium ion (GO:0046686);; Biological Process: intracellular transport (GO:0046907);; Biological Process: gametophyte development (GO:0048229);; Biological Process: shoot system development (GO:0048367);; Biological Process: floral organ development (GO:0048437);; Biological Process: floral whorl development (GO:0048438);; Biological Process: stamen development (GO:0048443);; Biological Process: androecium development (GO:0048466);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: anther development (GO:0048653);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: nucleic acid transport (GO:0050657);; Biological Process: RNA transport (GO:0050658);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; Biological Process: mRNA transport (GO:0051028);; Biological Process: nuclear export (GO:0051168);; Biological Process: nuclear transport (GO:0051169);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: establishment of RNA localization (GO:0051236);; Biological Process: cellular localization (GO:0051641);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: cellular response to stimulus (GO:0051716);; Cellular Component: symplast (GO:0055044);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Molecular Function: obsolete purine NTP-dependent helicase activity (GO:0070035);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: ribonucleoprotein complex localization (GO:0071166);; Biological Process: ribonucleoprotein complex export from nucleus (GO:0071426);; Biological Process: mRNA-containing ribonucleoprotein complex export from nucleus (GO:0071427);; Biological Process: organic substance transport (GO:0071702);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: reproductive shoot system development (GO:0090567);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: plant organ development (GO:0099402);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Cellular Component: ribonucleoprotein complex (GO:1990904);; ","K12812|3.2e-143|han:110891513|K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 56-like isoform X1","[A]","RNA processing and modification ","DEAD/DEAH box helicase;; Type III restriction enzyme, res subunit;; Helicase conserved C-terminal domain","DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1","DEAD-box ATP-dependent RNA helicase 15 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116976pilonHSYRG00012 PE=4 SV=1","A","RNA processing and modification","spliceosome RNA helicase DDX39B-like [Rhodamnia argentea]","biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: cell junction (GO:0030054);; biological process: localization (GO:0051179);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; cellular component: symplast (GO:0055044);; biological process: biological regulation (GO:0065007)","RNA transport (ko03013);; mRNA surveillance pathway (ko03015);; Spliceosome (ko03040)"]
["c107160.graph_c0",3,0.15,3,0.14,3,0.16,34,1.77,57,3.4,31,1.61,7.57e-08,3.105618612,"up","--","--","--","K19307|1.2e-75|nta:107784212|K19307 25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313] | (RefSeq) uncharacterized protein At4g26485-like","[S]","Function unknown ","Domain of unknown function (DUF2431)","Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX=3702 GN=HIPP41 PE=3 SV=1","DUF2431 domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038689001 PE=4 SV=1","S","Function unknown","uncharacterized protein At4g26485-like [Olea europaea var. sylvestris]","--","--"]
["c85620.graph_c0",37,6.75,33,6,29,5.59,140,25.11,165,34.64,163,29.56,2.15e-14,1.891039284,"up","--","--","Molecular Function: molybdate ion transmembrane transporter activity (GO:0015098);; Cellular Component: integral component of membrane (GO:0016021);; ","K24175|3.7e-23|oeu:111396339|K24175 MFS transporter, MFS domain-containing protein family, molybdate-anion transporter | (RefSeq) molybdate-anion transporter-like","[G]","Carbohydrate transport and metabolism ","--","--","Major facilitator superfamily domain-containing protein 5 OS=Salvia splendens OX=180675 GN=Saspl_006329 PE=3 SV=1","G","Carbohydrate transport and metabolism","molybdate-anion transporter-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102028.graph_c1",37,4.11,23,1.68,20,2.13,7,1.19,3,1.3,6,2.29,9.17e-06,-2.42235119,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105719.graph_c0",4,0.24,7,0.4,1,0.06,18,1.12,33,2.35,22,1.36,0.001048993,2.050831756,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116921.graph_c0",38,0.72,31,0.52,45,0.87,127,2.47,143,3.13,179,3.46,1.31e-10,1.619102651,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825);; Biological Process: trehalose biosynthetic process (GO:0005992);; ","K16055|8.4e-239|nto:104105815|K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] | (RefSeq) alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like isoform X1","[G]","Carbohydrate transport and metabolism ","Glycosyltransferase family 20;; Trehalose-phosphatase","Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana OX=3702 GN=TPS1 PE=1 SV=1","Alpha,alpha-trehalose-phosphate synthase (UDP-forming) OS=Nyssa sinensis OX=561372 GN=F0562_013791 PE=3 SV=1","G","Carbohydrate transport and metabolism","hypothetical protein F0562_013791 [Nyssa sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Starch and sucrose metabolism (ko00500)"]
["c108239.graph_c0",120,7.09,117,4.08,107,4.95,430,14.78,507,19.67,570,22.36,6.49e-34,1.798644838,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: membrane (GO:0016020);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: cell periphery (GO:0071944);; ","K19996|1.5e-119|atr:18449038|K19996 phosphatidylinositol transfer protein SFH5 | (RefSeq) patellin-3","[I]","Lipid transport and metabolism ","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Patellin-3 OS=Arabidopsis thaliana OX=3702 GN=PATL3 PE=1 SV=2","Phosphatidylinositol transfer protein SEC14 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14890 PE=3 SV=1","I","Lipid transport and metabolism","patellin-3 [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226)","--"]
["c100638.graph_c0",27,1.36,15,0.72,29,1.53,87,4.49,94,5.45,104,5.28,1.82e-07,1.631587763,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23052|4.3e-116|oeu:111398763|K23052 NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [EC:1.6.5.-] | (RefSeq) NAD(P)H-quinone oxidoreductase subunit U, chloroplastic isoform X1","--","--","--","NAD(P)H-quinone oxidoreductase subunit U, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhU PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28807 PE=4 SV=1","S","Function unknown","NAD(P)H-quinone oxidoreductase subunit U, chloroplastic isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c91951.graph_c0",2,0.07,3,0.09,1,0.03,79,2.64,102,3.94,96,3.32,4.07e-18,4.703345823,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_022099 PE=4 SV=1","--","--","uncharacterized protein LOC111383969 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104612.graph_c0",55,5.46,74,6.5,60,6.02,27,2.17,21,2.43,17,1.57,7.03e-08,-1.800034455,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18445 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111365819 [Olea europaea var. sylvestris]","--","--"]
["c112559.graph_c0",769,139.24,872,150.81,740,139,2416,351.36,2487,411.06,2709,385.18,1.41e-78,1.354717024,"up","--","--","Biological Process: ribosomal large subunit assembly (GO:0000027);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: assembly of large subunit precursor of preribosome (GO:1902626);; ","K02896|1.6e-77|oeu:111386372|K02896 large subunit ribosomal protein L24e | (RefSeq) 60S ribosomal protein L24","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L24e","60S ribosomal protein L24-1 OS=Arabidopsis thaliana OX=3702 GN=RPL24A PE=1 SV=2","TRASH domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G085300 PE=2 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L24 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c112383.graph_c0",171,5.02,203,6.62,172,5.74,2274,89.68,2744,120.19,2834,101.94,3e-232,3.516754705,"up","[E]","Amino acid transport and metabolism ","Cellular Component: cytoplasm (GO:0005737);; Biological Process: L-phenylalanine catabolic process (GO:0006559);; Biological Process: cinnamic acid biosynthetic process (GO:0009800);; Molecular Function: phenylalanine ammonia-lyase activity (GO:0045548);; ","K10775|0.0e+00|oeu:111403111|K10775 phenylalanine ammonia-lyase [EC:4.3.1.24] | (RefSeq) phenylalanine ammonia-lyase-like isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Aromatic amino acid lyase;; Aromatic amino acid lyase","Phenylalanine ammonia-lyase OS=Camellia sinensis OX=4442 GN=PAL PE=2 SV=1","Phenylalanine ammonia-lyase OS=Olea europaea OX=4146 GN=PAL PE=2 SV=1","H","Coenzyme transport and metabolism","phenylalanine ammonia-lyase-like isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Phenylalanine metabolism (ko00360);; Phenylpropanoid biosynthesis (ko00940)"]
["c113648.graph_c0",24,8.82,19,6.46,19,7.04,55,20.74,58,25.16,53,19.75,0.003067061,1.065993389,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c104873.graph_c0",14,0.84,8,0.46,11,0.68,57,3.4,62,4.23,64,3.67,2.01e-07,2.055525461,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11516 PE=4 SV=1","--","--","uncharacterized protein LOC111408829 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107978.graph_c4",0,0,0,0,0,0,17,0.8,14,0.69,30,1.38,1.06e-06,4.303641555,"up","[CR]","--","Molecular Function: furaneol oxidoreductase activity (GO:0102978);; ","K18980|5.2e-179|oeu:111410814|K18980 2-methylene-furan-3-one reductase [EC:1.3.1.105] | (RefSeq) 2-methylene-furan-3-one reductase-like","[CR]","--","Zinc-binding dehydrogenase;; Zinc-binding dehydrogenase;; Alcohol dehydrogenase GroES-like domain","2-methylene-furan-3-one reductase OS=Solanum lycopersicum OX=4081 GN=EO PE=1 SV=1","Putative 2-methylene-furan-3-one reductase-like OS=Davidia involucrata OX=16924 GN=Din_047414 PE=4 SV=1","C","Energy production and conversion","2-methylene-furan-3-one reductase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c114925.graph_c0",126,3.56,106,2.86,90,2.64,494,16.93,493,19.43,587,20.35,4.33e-42,1.955092274,"up","[C]","Energy production and conversion ","Molecular Function: malic enzyme activity (GO:0004470);; Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);; Molecular Function: malate dehydrogenase (decarboxylating) (NADP+) activity (GO:0004473);; Biological Process: pyruvate metabolic process (GO:0006090);; Biological Process: malate metabolic process (GO:0006108);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NAD binding (GO:0051287);; ","K00029|0.0e+00|sind:105172655|K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] | (RefSeq) NADP-dependent malic enzyme-like isoform X1","[C]","Energy production and conversion ","Malic enzyme, NAD binding domain;; Malic enzyme, N-terminal domain","NADP-dependent malic enzyme OS=Populus trichocarpa OX=3694 PE=2 SV=3","Malic enzyme OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003353mg PE=3 SV=1","C","Energy production and conversion","NADP-dependent malic enzyme-like isoform X1 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c111126.graph_c1",126,4.73,138,4.2,150,6.19,449,18.12,377,16.2,460,18.57,3.09e-20,1.300709963,"up","--","--","Molecular Function: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (GO:0016655);; ","--","--","--","Cyanobacterial and plastid NDH-1 subunit M","NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1","NAD(P)H dehydrogenase subunit M OS=Olea europaea OX=4146 PE=2 SV=1","S","Function unknown","uncharacterized protein LOC111402319 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c99458.graph_c0",15129,752.93,14520,683.89,13048,670.85,7163,365.13,6683,390.7,7490,380.16,1.92e-161,-1.321827955,"down","--","--","Molecular Function: NAD-dependent histone deacetylase activity (H3-K14 specific) (GO:0032041);; ","--","[R]","General function prediction only ","Leucine rich repeat;; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies);; Leucine Rich repeat","DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2","Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08356 PE=4 SV=1","S","Function unknown","DNA damage-repair/toleration protein DRT100-like, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c97571.graph_c0",6,0.79,5,0.84,7,1.1,111,28.89,68,20.06,95,24.74,4.01e-16,3.41109263,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","--","RING-CH-type domain-containing protein OS=Solanum tuberosum OX=4113 PE=4 SV=1","--","--","uncharacterized protein LOC111397822 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c110988.graph_c1",33,1.28,31,1.13,40,1.59,12,0.47,23,1.04,21,0.83,0.005705948,-1.159584409,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c86516.graph_c0",9,0.6,17,0.89,14,0.8,103,5.77,108,7.23,105,6.07,8.97e-15,2.581478286,"up","--","--","--","K03283|1.4e-34|cann:107854185|K03283 heat shock 70kDa protein 1/2/6/8 | (RefSeq) heat shock cognate 70 kDa protein 2-like","--","--","Lecithin retinol acyltransferase","Protein LEAD-SENSITIVE 1 OS=Arabidopsis thaliana OX=3702 GN=PSE1 PE=2 SV=1","LRAT domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027687001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC113761835 [Coffea eugenioides]","--","Spliceosome (ko03040);; Protein processing in endoplasmic reticulum (ko04141);; Endocytosis (ko04144)"]
["c111341.graph_c0",24,1.39,14,0.92,15,0.46,92,4.06,108,5.62,94,3.77,1.3e-10,2.092995886,"up","[D]","Cell cycle control, cell division, chromosome partitioning ","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; ","K10260|2.1e-16|ota:OT_ostta09g00430|K10260 F-box and WD-40 domain protein 7 | (RefSeq) WD40/YVTN repeat-like-containing domain","[S]","Function unknown ","U-box domain;; Armadillo/beta-catenin-like repeat","U-box domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUB9 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Davidia involucrata OX=16924 GN=Din_000508 PE=4 SV=1","S","Function unknown","U-box domain-containing protein 9-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ubiquitin mediated proteolysis (ko04120)"]
["c105040.graph_c0",73,2.69,120,3.5,87,2.77,542,18.35,567,20.88,633,20.97,4.75e-52,2.303104882,"up","[I]","Lipid transport and metabolism ","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18243 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111399401 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c105101.graph_c0",151,11.25,156,11.17,136,10.35,65,4.31,62,4.82,99,6.48,9.53e-10,-1.284688796,"down","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K21630|5.9e-28|cpep:111804029|K21630 GATA-type zinc finger protein 1 | (RefSeq) GATA transcription factor 5-like isoform X1","[K]","Transcription ","GATA zinc finger","GATA transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=GATA8 PE=1 SV=1","GATA transcription factor OS=Davidia involucrata OX=16924 GN=Din_005192 PE=3 SV=1","K","Transcription","GATA transcription factor 8-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c106913.graph_c0",463,15.99,443,15.18,388,14.28,217,6.58,228,8.11,293,8.54,7.83e-19,-1.129679568,"down","--","--","Biological Process: proteolysis (GO:0006508);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","--","--","--","Ulp1 protease family, C-terminal catalytic domain;; Domain of unknown function (DUF1985)","--","uncharacterized protein LOC107831527 OS=Nicotiana tabacum OX=4097 GN=LOC107831527 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111365640 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","--"]
["c74885.graph_c0",41,8.99,34,6.97,28,6.26,0,0,0,0,0,0,6.5e-12,-5.543147583,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c83230.graph_c0",2,0.17,2,0.16,3,0.26,28,2.38,29,2.84,27,2.35,5.66e-06,2.859334313,"up","--","--","Molecular Function: electron transfer activity (GO:0009055);; ","--","--","--","Plastocyanin-like domain","Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2","Phytocyanin domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12229 PE=4 SV=1","S","Function unknown","early nodulin-like protein 3 isoform X1 [Olea europaea var. sylvestris]","molecular function: electron carrier activity (GO:0009055)","--"]
["c100397.graph_c0",19,1.24,47,2.64,41,2.42,124,8.51,127,9.91,155,10.95,1.82e-08,1.566120051,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[A]","RNA processing and modification ","Protein of unknown function (DUF3675)","--","Protein involved in mRNA turnover and stability OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20078 PE=4 SV=1","A","RNA processing and modification","uncharacterized protein LOC111371406 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108929.graph_c0",42,1.74,51,2.01,32,1.42,189,8.01,179,8.85,164,6.73,4.51e-14,1.750117531,"up","--","--","Molecular Function: 3-oxo-5-alpha-steroid 4-dehydrogenase activity (GO:0003865);; Biological Process: dolichol-linked oligosaccharide biosynthetic process (GO:0006488);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: polyprenol reductase activity (GO:0102389);; ","K12345|1.8e-181|oeu:111410560|K12345 3-oxo-5-alpha-steroid 4-dehydrogenase 3 / polyprenol reductase [EC:1.3.1.22 1.3.1.94] | (RefSeq) polyprenol reductase 2-like isoform X1","[I]","Lipid transport and metabolism ","3-oxo-5-alpha-steroid 4-dehydrogenase","Polyprenol reductase 2 OS=Arabidopsis thaliana OX=3702 GN=PPRD2 PE=1 SV=2","Putative steroid reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28472 PE=4 SV=1","I","Lipid transport and metabolism","polyprenol reductase 2-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","N-Glycan biosynthesis (ko00510)"]
["c96589.graph_c0",62,4.32,53,3.53,67,4.7,209,17.73,192,18.79,260,20.15,6.15e-14,1.512617143,"up","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: galactosylxylosylprotein 3-beta-galactosyltransferase activity (GO:0047220);; ","K20843|1.1e-283|sind:105156819|K20843 hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-] | (RefSeq) hydroxyproline O-galactosyltransferase GALT3","[G]","Carbohydrate transport and metabolism ","Galactosyltransferase;; Galactoside-binding lectin","Hydroxyproline O-galactosyltransferase GALT3 OS=Arabidopsis thaliana OX=3702 GN=GALT3 PE=2 SV=1","Galactosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04033 PE=3 SV=1","G","Carbohydrate transport and metabolism","hydroxyproline O-galactosyltransferase GALT3 [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c91216.graph_c0",563,30.04,613,30.9,484,26.55,1331,74.23,1622,103.62,1722,95.54,1.53e-30,1.173427838,"up","--","--","Biological Process: metal ion transport (GO:0030001);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_7X13200 PE=4 SV=1","S","Function unknown","heavy metal-associated isoprenylated plant protein 6-like [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c109760.graph_c0",3,0.47,5,0.27,0,0,142,6.12,152,7.31,161,6.31,1.09e-26,5.105447312,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K11593|3.1e-42|dct:110097550|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 1A-like","[R]","General function prediction only ","GAG-pre-integrase domain;; gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Integrase catalytic domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021528 PE=4 SV=1","K","Transcription","hypothetical protein EZV62_021528 [Acer yangbiense]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c114080.graph_c0",7,0.2,5,0.14,4,0.12,34,0.99,30,0.99,39,1.13,3e-05,2.177908281,"up","--","--","Biological Process: DNA replication initiation (GO:0006270);; Biological Process: cell division (GO:0051301);; ","K06628|0.0e+00|oeu:111385818|K06628 cell division control protein 45 | (RefSeq) cell division control protein 45 homolog","[L]","Replication, recombination and repair ","CDC45-like protein","--","cell division control protein 45 homolog OS=Nicotiana sylvestris OX=4096 GN=LOC104239647 PE=3 SV=1","L","Replication, recombination and repair","cell division control protein 45 homolog [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c90052.graph_c0",44,4.71,31,3.12,42,4.61,13,1.42,14,1.76,11,1.2,1.01e-05,-1.851365382,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111391237 [Olea europaea var. sylvestris]","--","--"]
["c80681.graph_c0",18,1.29,15,1.02,7,0.52,51,3.75,73,6.15,65,4.75,2.93e-06,1.849396632,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: methionine adenosyltransferase activity (GO:0004478);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Biological Process: S-adenosylmethionine biosynthetic process (GO:0006556);; Biological Process: one-carbon metabolic process (GO:0006730);; Molecular Function: metal ion binding (GO:0046872);; ","K00789|1.5e-54|oeu:111389750|K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] | (RefSeq) S-adenosylmethionine synthase 5","[H]","Coenzyme transport and metabolism ","S-adenosylmethionine synthetase, C-terminal domain","S-adenosylmethionine synthase 2 OS=Vitis vinifera OX=29760 GN=METK2 PE=3 SV=1","S-adenosylmethionine synthase OS=Ricinus communis OX=3988 GN=RCOM_1003190 PE=3 SV=1","H","Coenzyme transport and metabolism","S-adenosylmethionine synthase 5 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Cysteine and methionine metabolism (ko00270);; Biosynthesis of amino acids (ko01230)"]
["c103548.graph_c0",117,11.48,140,12.81,112,11.99,329,25.54,329,28.15,423,31.64,1.84e-15,1.218652862,"up","--","--","Biological Process: cytoskeleton organization (GO:0007010);; Molecular Function: microtubule binding (GO:0008017);; ","--","--","--","Microtubule-associated protein 70","Microtubule-associated protein 70-1 OS=Oryza sativa subsp. japonica OX=39947 GN=MAP70.1 PE=2 SV=1","Putative microtubule-associated protein 70-2 OS=Davidia involucrata OX=16924 GN=Din_013327 PE=3 SV=1","S","Function unknown","microtubule-associated protein 70-1-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488)","--"]
["c93732.graph_c0",36,2.2,49,2.85,35,2.22,2,0.13,3,0.22,0,0,2.05e-12,-4.277324136,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K08794|2.1e-117|oeu:111371229|K08794 calcium/calmodulin-dependent protein kinase I [EC:2.7.11.17] | (RefSeq) phosphoenolpyruvate carboxylase kinase 1-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Phosphoenolpyruvate carboxylase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PPCK2 PE=1 SV=2","C-Jun N-terminal kinase OS=Salvia splendens OX=180675 GN=JNK PE=3 SV=1","T","Signal transduction mechanisms","phosphoenolpyruvate carboxylase kinase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c108143.graph_c0",20,1.46,28,1.96,22,1.95,63,3.57,50,3.49,76,4.21,0.001736341,1.070884219,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; ","K13195|1.1e-37|cic:CICLE_v10016768mg|K13195 cold-inducible RNA-binding protein | (RefSeq) hypothetical protein","[R]","General function prediction only ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM6 PE=1 SV=1","Putative nucleotide-binding alpha-beta plait domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0020731 PE=4 SV=1","A","RNA processing and modification","small RNA-binding protein 11, chloroplastic isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c101263.graph_c1",149,5.92,121,4.54,141,5.8,658,26.71,600,27.9,660,26.66,1.06e-48,1.889068618,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; ","K11274|5.3e-33|cre:CHLREDRAFT_193148|K11274 chromosome transmission fidelity protein 4 | (RefSeq) predicted protein","[R]","General function prediction only ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_048313 PE=4 SV=1","A","RNA processing and modification","polyadenylate-binding protein RBP47B' isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c113897.graph_c1",43,4.4,33,3.28,23,2.2,142,14.35,136,17.43,144,15.14,1.53e-11,1.741399078,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_035019 PE=4 SV=1","--","--","uncharacterized protein LOC111403861 [Olea europaea var. sylvestris]","--","--"]
["c85105.graph_c0",34,3.08,26,2.12,24,2.14,10,0.89,8,0.81,16,1.41,0.00111379,-1.539552359,"down","--","--","--","--","--","--","--","Cadmium-induced protein AS8 OS=Arabidopsis thaliana OX=3702 GN=At4g19070 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014701mg PE=4 SV=1","S","Function unknown","cadmium-induced protein AS8 [Olea europaea var. sylvestris]","--","--"]
["c118297.graph_c0",63,14.43,69,14.77,83,19.45,32,7.57,20,5.4,26,6.06,2.46e-08,-1.746100792,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c73628.graph_c0",41,2.64,54,3.34,40,2.63,1,0.07,6,0.45,6,0.39,7.61e-12,-3.4168202,"down","[C]","Energy production and conversion ","Molecular Function: lipid binding (GO:0008289);; Molecular Function: proton transmembrane transporter activity (GO:0015078);; Biological Process: ATP synthesis coupled proton transport (GO:0015986);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263);; ","K02128|4.2e-18|ccp:ChcroMp11|K02128 F-type H+-transporting ATPase subunit c | (RefSeq) atp9; ATP synthase F0 subunit 9","[C]","Energy production and conversion ","ATP synthase subunit C","ATP synthase subunit 9, mitochondrial OS=Chondrus crispus OX=2769 GN=ATP9 PE=3 SV=1","ATP synthase lipid-binding protein, mitochondrial (Fragment) OS=Anthurium amnicola OX=1678845 GN=AT5G PE=3 SV=1","C","Energy production and conversion","ATP synthase F0 subunit 9 [Globisporangium ultimum]","molecular function: binding (GO:0005488);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","Oxidative phosphorylation (ko00190)"]
["c114305.graph_c1",55,2.09,59,1.99,62,2.32,196,6.97,201,8.77,222,8.41,1.48e-13,1.474791174,"up","--","--","Biological Process: fucose metabolic process (GO:0006004);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K23280|5.1e-74|lang:109339296|K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) uncharacterized protein At1g04910-like","--","--","GDP-fucose protein O-fucosyltransferase","O-fucosyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=OFUT9 PE=2 SV=1","O-fucosyltransferase family protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003510mg PE=3 SV=1","G","Carbohydrate transport and metabolism","O-fucosyltransferase 9 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c107663.graph_c1",29,2.86,19,1.92,29,2.88,9,0.91,12,1.42,15,1.57,0.005619907,-1.340047805,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c95070.graph_c0",0,0,0,0,0,0,356,30.82,515,51.09,529,45.54,5.6e-34,8.302414273,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: defense response (GO:0006952);; ","--","--","--","Thaumatin family","Osmotin-like protein OS=Solanum lycopersicum OX=4081 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a012525mg PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","osmotin-like protein [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; biological process: response to stimulus (GO:0050896)","--"]
["c98064.graph_c0",23,0.87,38,1.33,18,0.69,113,4.31,98,4.25,150,5.68,4.77e-10,1.824605892,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: mannan endo-1,4-beta-mannosidase activity (GO:0016985);; ","K19355|1.0e-255|oeu:111402407|K19355 mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] | (RefSeq) mannan endo-1,4-beta-mannosidase 6-like","--","--","Cellulase (glycosyl hydrolase family 5)","Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MAN6 PE=2 SV=2","Mannan endo-1,4-beta-mannosidase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a006272mg PE=3 SV=1","G","Carbohydrate transport and metabolism","mannan endo-1,4-beta-mannosidase 6-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Fructose and mannose metabolism (ko00051)"]
["c82083.graph_c2",9,1.21,4,0.51,8,1.1,30,4.14,26,4.05,28,3.69,0.003716167,1.542947668,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K16302|1.3e-90|oeu:111412444|K16302 metal transporter CNNM | (RefSeq) DUF21 domain-containing protein At2g14520-like","[S]","Function unknown ","--","DUF21 domain-containing protein At4g33700 OS=Arabidopsis thaliana OX=3702 GN=CBSDUF6 PE=1 SV=1","Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10028492mg PE=4 SV=1","S","Function unknown","DUF21 domain-containing protein At2g14520-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c90007.graph_c0",4,0.2,2,0.1,1,0.05,17,0.88,28,1.67,28,1.45,6e-05,2.651036325,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","K01379|1.2e-06|zma:103643987|K01379 cathepsin D [EC:3.4.23.5] | (RefSeq) aspartic proteinase isoform X1","--","--","TFIIS helical bundle-like domain","Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana OX=3702 GN=MED26C PE=1 SV=1","TFIIS N-terminal domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04123 PE=4 SV=1","K","Transcription","probable mediator of RNA polymerase II transcription subunit 26c [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c104418.graph_c0",199,7.12,171,5.78,167,6.17,5008,183.41,4765,199.94,5273,192.19,0,4.477190549,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K21995|1.4e-284|oeu:111378346|K21995 cytochrome P450 family 77 subfamily A [EC:1.14.-.-] | (RefSeq) cytochrome P450 77A2-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450","Cytochrome P450 77A2 OS=Solanum melongena OX=4111 GN=CYP77A2 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00029568001 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 77A2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Cutin, suberine and wax biosynthesis (ko00073)"]
["c109653.graph_c1",1,0.47,7,3.03,4,1.88,21,10.12,19,10.56,32,15.23,0.001247579,2.004865735,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110505.graph_c1",2206,61.83,2528,66.66,2407,69.12,1264,35.02,1014,32.59,1185,33.26,9.41e-76,-1.367106945,"down","[PR]","--","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: chlorophyllide a oxygenase [overall] activity (GO:0010277);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; ","K13600|1.5e-294|oeu:111394351|K13600 chlorophyllide a oxygenase [EC:1.14.13.122] | (RefSeq) chlorophyllide a oxygenase, chloroplastic-like","--","--","Rieske [2Fe-2S] domain;; Vanillate O-demethylase oxygenase C-terminal domain;; Pheophorbide a oxygenase","Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CAO PE=2 SV=1","Chlorophyllide-a oxygenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19913 PE=4 SV=1","P","Inorganic ion transport and metabolism","chlorophyllide a oxygenase, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Porphyrin and chlorophyll metabolism (ko00860)"]
["c116156.graph_c0",480,7.94,552,8.67,487,8.29,338,6.38,260,5.58,318,5.84,3.07e-20,-1.05043051,"down","--","--","Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (GO:0004439);; Biological Process: phosphatidylinositol dephosphorylation (GO:0046856);; ","K01099|6.0e-38|var:108345715|K01099 inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36] | (RefSeq) type IV inositol polyphosphate 5-phosphatase 9-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Endonuclease/Exonuclease/phosphatase family","Type I inositol polyphosphate 5-phosphatase 8 OS=Arabidopsis thaliana OX=3702 GN=IP5P8 PE=2 SV=1","Putative type IV inositol polyphosphate 5-phosphatase 7 OS=Davidia involucrata OX=16924 GN=Din_022086 PE=3 SV=1","T","Signal transduction mechanisms","type I inositol polyphosphate 5-phosphatase 4-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070)"]
["c100886.graph_c0",11,0.43,5,0.21,9,0.37,61,2.78,70,4.86,105,4.22,1.39e-11,2.765584692,"up","--","--","Biological Process: malate transport (GO:0015743);; Cellular Component: integral component of membrane (GO:0016021);; ","K03695|1.8e-33|egr:104416563|K03695 ATP-dependent Clp protease ATP-binding subunit ClpB | (RefSeq) chaperone protein ClpB1-like","[R]","General function prediction only ","Aluminium activated malate transporter;; Fusaric acid resistance protein-like","Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=ALMT2 PE=2 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030875 PE=3 SV=1","S","Function unknown","aluminum-activated malate transporter 2-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102896.graph_c0",208,25.43,177,22.02,187,25.09,555,54.6,502,58.12,519,51.89,7.48e-19,1.134800714,"up","--","--","Biological Process: defense response (GO:0006952);; Molecular Function: ADP binding (GO:0043531);; ","K13453|1.7e-68|sot:102596100|K13453 disease resistance protein | (RefSeq) putative late blight resistance protein homolog R1B-23","[T]","Signal transduction mechanisms ","NB-ARC domain","Putative late blight resistance protein homolog R1B-14 OS=Solanum demissum OX=50514 GN=R1B-14 PE=3 SV=1","NB-ARC domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000577mg PE=4 SV=1","T","Signal transduction mechanisms","putative late blight resistance protein homolog R1B-14 isoform X3 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c116090.graph_c0",126,4.65,180,6.42,164,5.95,549,21.16,472,20.02,629,21.69,1.96e-26,1.476268326,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","K20100|2.6e-119|oeu:111368792|K20100 YTH domain-containing protein 1 | (RefSeq) uncharacterized protein LOC111368792 isoform X1","[TA]","--","YT521-B-like domain;; YT521-B-like domain","Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0677700 PE=4 SV=1","Putative signal transduction protein involved in RNA splicing OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19514 PE=4 SV=1","--","--","zinc finger CCCH domain-containing protein 45-like isoform X5 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c97494.graph_c0",71,10.75,64,9.19,58,9.03,30,4.47,38,6.58,34,5.09,6.4e-05,-1.207401836,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114470.graph_c0",66,0.94,109,4.97,96,3.56,29,1.86,41,1.43,26,0.95,5.53e-09,-1.762358554,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Plus3 domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_20326 PE=4 SV=1","K","Transcription","uncharacterized protein At5g08430-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c104722.graph_c1",27508,1139.61,28996,1138.18,25865,1106.76,16491,694.81,14902,719.35,16848,707.2,1.85e-169,-1.093593938,"down","[E]","Amino acid transport and metabolism ","Molecular Function: glutamate-ammonia ligase activity (GO:0004356);; Molecular Function: ATP binding (GO:0005524);; Biological Process: glutamine biosynthetic process (GO:0006542);; ","K01915|4.3e-205|oeu:111408686|K01915 glutamine synthetase [EC:6.3.1.2] | (RefSeq) glutamine synthetase cytosolic isozyme 2-like isoform X1","[E]","Amino acid transport and metabolism ","Glutamine synthetase, catalytic domain;; Glutamine synthetase, beta-Grasp domain","Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera OX=29760 GN=GS1-2 PE=2 SV=1","Glutamine synthetase OS=Avicennia marina OX=82927 PE=2 SV=1","E","Amino acid transport and metabolism","glutamine synthetase cytosolic isozyme 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Arginine biosynthesis (ko00220);; Alanine, aspartate and glutamate metabolism (ko00250);; Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910);; Biosynthesis of amino acids (ko01230)"]
["c100418.graph_c0",7,0.41,10,0.56,4,0.27,36,2.18,53,3.67,46,2.77,3.05e-06,2.225367317,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_002557 PE=4 SV=1","--","--","uncharacterized protein LOC111392580 [Olea europaea var. sylvestris]","--","--"]
["c93881.graph_c0",1,0.07,6,0.33,3,0.18,52,3.18,64,4.41,57,3.41,2.42e-11,3.484675104,"up","--","--","Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: nucleus (GO:0005634);; Biological Process: reciprocal meiotic recombination (GO:0007131);; ","--","[DR]","--","Mnd1 HTH domain;; Leucine zipper with capping helix domain","Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=MND1 PE=1 SV=1","Meiotic nuclear division protein 1 homolog OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013270mg PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","meiotic nuclear division protein 1 homolog isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c104229.graph_c1",3,0.11,2,0.07,2,0.08,46,1.84,37,1.66,69,2.68,1.67e-10,3.671095794,"up","--","--","--","--","--","--","--","--","Putative proline-rich protein 4-like OS=Davidia involucrata OX=16924 GN=Din_047821 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111412859 [Olea europaea var. sylvestris]","--","--"]
["c89816.graph_c0",23,6.75,15,4.14,11,3.27,48,13.07,58,20.68,43,11.65,0.002248551,1.240210416,"up","--","--","--","--","--","--","--","--","Stem-specific protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04270 PE=4 SV=1","S","Function unknown","PREDICTED: uncharacterized protein LOC104245722 isoform X1 [Nicotiana sylvestris]","--","--"]
["c97883.graph_c1",82,5.65,100,6.59,79,5.51,247,17.81,195,15.93,278,19.58,6.22e-10,1.126665128,"up","--","--","Biological Process: regulation of monopolar cell growth (GO:0051513);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14765 PE=4 SV=1","S","Function unknown","protein LONGIFOLIA 1-like [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007)","--"]
["c71489.graph_c0",1,0.17,1,0.16,0,0,55,9.47,39,8.05,37,6.34,1.76e-10,4.545432205,"up","[T]","Signal transduction mechanisms ","Molecular Function: calcium ion binding (GO:0005509);; Biological Process: calcium-mediated signaling (GO:0019722);; ","K13448|8.5e-41|sind:105171604|K13448 calcium-binding protein CML | (RefSeq) calmodulin-like protein 11","[T]","Signal transduction mechanisms ","EF hand;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; EF hand;; EF-hand domain;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region;; EF-hand domain;; Caleosin related protein;; Dockerin type I domain","Calmodulin-2 OS=Oryza sativa subsp. indica OX=39946 GN=CAM2 PE=3 SV=1","Calmodulin OS=Salix brachista OX=2182728 GN=DKX38_013164 PE=3 SV=1","T","Signal transduction mechanisms","calmodulin-like protein 8 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","Plant-pathogen interaction (ko04626)"]
["c74594.graph_c0",31,3.48,25,2.64,25,2.99,11,1.26,8,1.05,10,1.14,0.000406383,-1.694638844,"down","--","--","--","--","--","--","--","--","Nucleoporin like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13718 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111394764 [Olea europaea var. sylvestris]","--","--"]
["c117047.graph_c4",838,12.6,888,13.41,732,12.39,2403,38.53,2522,43.61,2521,42.32,8.85e-62,1.280082128,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830);; Molecular Function: dTDP-4-dehydrorhamnose reductase activity (GO:0008831);; Biological Process: UDP-rhamnose biosynthetic process (GO:0010253);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Biological Process: dTDP-rhamnose biosynthetic process (GO:0019305);; ","K12451|1.4e-168|oeu:111376278|K12451 3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-] | (RefSeq) bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase","[G]","Carbohydrate transport and metabolism ","RmlD substrate binding domain;; NAD dependent epimerase/dehydratase family;; GDP-mannose 4,6 dehydratase;; Polysaccharide biosynthesis protein;; Fibronectin type-III domain","Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1","RmlD_sub_bind domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010842mg PE=4 SV=1","G","Carbohydrate transport and metabolism","bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c110043.graph_c0",48,2.25,21,1.46,19,1.36,1046,41.35,1021,48.2,1160,52.95,2.98e-39,4.694385214,"up","[N]","Cell motility ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: glucomannan 4-beta-mannosyltransferase activity (GO:0047259);; ","K13680|1.7e-252|oeu:111379915|K13680 beta-mannan synthase [EC:2.4.1.32] | (RefSeq) glucomannan 4-beta-mannosyltransferase 2-like","--","--","Glycosyl transferase family group 2;; Glycosyltransferase like family 2;; Glycosyl transferase family 2;; Glycosyl transferase family 21","Glucomannan 4-beta-mannosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=CSLA2 PE=1 SV=1","Glucomannan 4-beta-mannosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16518 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","Glucomannan 4-beta-mannosyltransferase [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c100174.graph_c0",3,0.23,5,0.36,9,0.72,59,4.67,42,3.81,64,5.04,5.82e-09,2.750965935,"up","--","--","--","--","--","--","PDDEXK-like family of unknown function","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_037144 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111370973 [Olea europaea var. sylvestris]","--","--"]
["c94441.graph_c0",8,0.33,9,0.35,10,0.43,82,3.42,64,3.03,71,2.94,6.85e-11,2.564902387,"up","--","--","Biological Process: cell cycle checkpoint (GO:0000075);; Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: mitotic cell cycle (GO:0000278);; Cellular Component: chromosome, centromeric region (GO:0000775);; Cellular Component: kinetochore (GO:0000776);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: cell cycle (GO:0007049);; Biological Process: regulation of mitotic nuclear division (GO:0007088);; Biological Process: mitotic cell cycle checkpoint (GO:0007093);; Biological Process: mitotic spindle assembly checkpoint (GO:0007094);; Biological Process: regulation of mitotic cell cycle (GO:0007346);; Biological Process: biological_process (GO:0008150);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of cell cycle process (GO:0010564);; Biological Process: negative regulation of organelle organization (GO:0010639);; Biological Process: negative regulation of cell cycle process (GO:0010948);; Biological Process: regulation of mitotic sister chromatid separation (GO:0010965);; Biological Process: cell cycle process (GO:0022402);; Biological Process: regulation of mitotic metaphase/anaphase transition (GO:0030071);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Biological Process: spindle checkpoint (GO:0031577);; Molecular Function: ubiquitin-like protein binding (GO:0032182);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: regulation of organelle organization (GO:0033043);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: regulation of sister chromatid segregation (GO:0033045);; Biological Process: negative regulation of sister chromatid segregation (GO:0033046);; Biological Process: regulation of mitotic sister chromatid segregation (GO:0033047);; Biological Process: negative regulation of mitotic sister chromatid segregation (GO:0033048);; Cellular Component: mitotic checkpoint complex (GO:0033597);; Molecular Function: ubiquitin binding (GO:0043130);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chromosomal part (GO:0044427);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of cell cycle (GO:0045786);; Biological Process: negative regulation of mitotic nuclear division (GO:0045839);; Biological Process: negative regulation of mitotic metaphase/anaphase transition (GO:0045841);; Biological Process: negative regulation of mitotic cell cycle (GO:0045930);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: negative regulation of cellular component organization (GO:0051129);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: regulation of nuclear division (GO:0051783);; Biological Process: negative regulation of nuclear division (GO:0051784);; Biological Process: regulation of chromosome segregation (GO:0051983);; Biological Process: negative regulation of chromosome segregation (GO:0051985);; Biological Process: biological regulation (GO:0065007);; Biological Process: spindle assembly checkpoint (GO:0071173);; Biological Process: mitotic spindle checkpoint (GO:0071174);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; Cellular Component: chromosomal region (GO:0098687);; Biological Process: regulation of cell cycle phase transition (GO:1901987);; Biological Process: negative regulation of cell cycle phase transition (GO:1901988);; Biological Process: regulation of mitotic cell cycle phase transition (GO:1901990);; Biological Process: negative regulation of mitotic cell cycle phase transition (GO:1901991);; Biological Process: regulation of metaphase/anaphase transition of cell cycle (GO:1902099);; Biological Process: negative regulation of metaphase/anaphase transition of cell cycle (GO:1902100);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: mitotic cell cycle process (GO:1903047);; Biological Process: regulation of chromosome separation (GO:1905818);; Biological Process: negative regulation of chromosome separation (GO:1905819);; Cellular Component: transferase complex (GO:1990234);; Cellular Component: bub1-bub3 complex (GO:1990298);; Biological Process: negative regulation of mitotic sister chromatid separation (GO:2000816);; Biological Process: negative regulation of chromosome organization (GO:2001251);; ","K02180|2.3e-111|sind:105160006|K02180 cell cycle arrest protein BUB3 | (RefSeq) mitotic checkpoint protein BUB3.3","[D]","Cell cycle control, cell division, chromosome partitioning ","WD domain, G-beta repeat","Mitotic checkpoint protein BUB3.3 OS=Arabidopsis thaliana OX=3702 GN=BUB3.3 PE=2 SV=1","Mitotic spindle checkpoint protein BUB3, WD repeat superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19674 PE=4 SV=1","D","Cell cycle control, cell division, chromosome partitioning","mitotic checkpoint protein BUB3.3 [Sesamum indicum]","biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; molecular function: binding (GO:0005488)","--"]
["c113248.graph_c0",3,0.24,12,0.44,2,0.07,121,4.02,116,4.26,128,4.62,7.99e-22,3.907702572,"up","[E]","Amino acid transport and metabolism ","Biological Process: glutathione catabolic process (GO:0006751);; Molecular Function: glutathione hydrolase activity (GO:0036374);; ","K18592|5.1e-179|oeu:111373088|K18592 gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase [EC:2.3.2.2 3.4.19.13 3.4.19.14] | (RefSeq) glutathione hydrolase 1-like isoform X1","[E]","Amino acid transport and metabolism ","Gamma-glutamyltranspeptidase","Glutathione hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=GGT1 PE=2 SV=1","Gamma-glutamyltranspeptidase 1 OS=Nicotiana attenuata OX=49451 GN=GGT1 PE=4 SV=1","E","Amino acid transport and metabolism","glutathione hydrolase 1-like isoform X2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","Taurine and hypotaurine metabolism (ko00430);; Cyanoamino acid metabolism (ko00460);; Glutathione metabolism (ko00480);; Arachidonic acid metabolism (ko00590)"]
["c70563.graph_c0",8,0.56,3,0.2,2,0.14,25,1.9,26,2.24,28,2.05,0.000508057,2.05481916,"up","[C]","Energy production and conversion ","Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: oxaloacetate metabolic process (GO:0006107);; Biological Process: malate metabolic process (GO:0006108);; Biological Process: NADH metabolic process (GO:0006734);; Molecular Function: L-malate dehydrogenase activity (GO:0030060);; ","K00025|2.8e-149|oeu:111410862|K00025 malate dehydrogenase [EC:1.1.1.37] | (RefSeq) malate dehydrogenase, cytoplasmic-like isoform X1","[C]","Energy production and conversion ","lactate/malate dehydrogenase, NAD binding domain;; lactate/malate dehydrogenase, alpha/beta C-terminal domain","Malate dehydrogenase OS=Nicotiana tabacum OX=4097 GN=MD1 PE=1 SV=1","Malate dehydrogenase OS=Ricinus communis OX=3988 GN=RCOM_1609380 PE=3 SV=1","C","Energy production and conversion","malate dehydrogenase-like isoform X2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Citrate cycle (TCA cycle) (ko00020);; Cysteine and methionine metabolism (ko00270);; Pyruvate metabolism (ko00620);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c110493.graph_c0",61,3.85,85,5.05,73,4.74,21,1.3,3,0.21,13,0.78,7.7e-13,-2.777787645,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","--","--","--","Reverse transcriptase-like","--","--","--","--","--","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c88653.graph_c0",2,0.2,4,0.37,6,0.6,47,4.71,59,6.78,52,5.18,6.89e-10,3.137088073,"up","--","--","Molecular Function: electron transfer activity (GO:0009055);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","K15893|1.1e-07|cann:107865473|K15893 glycerate dehydrogenase [EC:1.1.1.29] | (RefSeq) glycerate dehydrogenase HPR, peroxisomal-like","--","--","Plastocyanin-like domain","--","lamin-like protein OS=Nicotiana tabacum OX=4097 GN=LOC107806868 PE=4 SV=1","S","Function unknown","cucumber peeling cupredoxin-like [Olea europaea var. sylvestris]","molecular function: electron carrier activity (GO:0009055);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","Glycine, serine and threonine metabolism (ko00260);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200)"]
["c95039.graph_c0",48,7.14,59,7.9,37,6,2,0.32,4,0.69,6,0.92,4.62e-13,-3.60975375,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c88145.graph_c0",4048,319.2,3779,281.18,3606,292.27,2189,176.65,1844,170.51,1912,153.6,2.79e-72,-1.2632728,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Domain of unknown function (DUF588)","CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1","CASP-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26961 PE=3 SV=1","S","Function unknown","CASP-like protein 1E2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","--"]
["c110386.graph_c0",261,10.77,233,8.43,217,9.14,121,4.86,77,3.65,95,4.05,6.3e-19,-1.590407004,"down","[G]","Carbohydrate transport and metabolism ","Biological Process: biosynthetic process (GO:0009058);; Molecular Function: strictosidine synthase activity (GO:0016844);; ","--","[R]","General function prediction only ","Strictosidine synthase;; SMP-30/Gluconolactonase/LRE-like region","Protein STRICTOSIDINE SYNTHASE-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=SSL7 PE=2 SV=1","Str_synth domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036981001 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","protein STRICTOSIDINE SYNTHASE-LIKE 6-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","--"]
["c100268.graph_c0",10,1.47,15,2.08,8,1.2,37,5.51,41,7.1,41,5.92,0.001072232,1.455774663,"up","--","--","Biological Process: auxin-activated signaling pathway (GO:0009734);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","K13947|3.5e-45|oeu:111405232|K13947 auxin efflux carrier family protein | (RefSeq) probable auxin efflux carrier component 1c isoform X1","--","--","Membrane transport protein","Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1","Auxin efflux carrier component OS=Davidia involucrata OX=16924 GN=Din_028064 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable auxin efflux carrier component 1c isoform X1 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c93890.graph_c0",47,4.74,67,5.87,67,7.1,22,2.31,14,1.25,13,1.36,4.2e-09,-2.128470871,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99744.graph_c0",27,1.75,41,2.3,23,1.41,103,6.27,118,9.34,110,6.73,8.51e-08,1.518209292,"up","--","--","Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","[GMW]","--","--","Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana OX=3702 GN=At3g07620 PE=3 SV=1","Exostosin domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_005696 PE=3 SV=1","--","--","probable glycosyltransferase At3g07620 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c101292.graph_c0",14,1.4,10,1.05,3,0.14,48,2.45,48,3.71,78,4.67,5.05e-07,2.232069335,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c37051.graph_c0",20,3.13,25,3.67,32,5.12,0,0,0,0,0,0,5.35e-10,-5.159660175,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116444.graph_c1",40,2.5,56,3.12,44,2.81,19,1.29,22,1.52,26,1.78,0.000192769,-1.336941205,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97667.graph_c0",47,2.13,41,1.77,21,1.15,106,5.26,133,6.99,135,6.47,2.95e-07,1.435851087,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K19476|3.8e-25|cic:CICLE_v10026997mg|K19476 vacuolar protein sorting-associated protein IST1 | (RefSeq) hypothetical protein","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein;; Tryptophan/tyrosine permease family","Lysine histidine transporter-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g25530 PE=2 SV=1","Lysine histidine transporter 2 OS=Camellia sinensis OX=4442 GN=LHT2 PE=2 SV=1","E","Amino acid transport and metabolism","lysine histidine transporter-like 6 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Endocytosis (ko04144)"]
["c82543.graph_c0",2,0.07,0,0,0,0,19,0.65,20,0.79,35,1.2,1.38e-06,3.728311984,"up","--","--","--","--","--","--","--","Uncharacterized protein At4g38062 OS=Arabidopsis thaliana OX=3702 GN=At4g38062 PE=4 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_036519 PE=4 SV=1","S","Function unknown","uncharacterized protein At4g38062 [Sesamum indicum]","--","--"]
["c102170.graph_c0",26,2.1,27,2.01,26,2.16,69,5.87,72,7.02,68,5.75,0.000910152,1.056374016,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c83404.graph_c0",105,8.24,126,9.32,78,6.29,60,4.82,37,3.4,64,5.11,1.56e-06,-1.243349827,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Late embryogenesis abundant protein","--","LEA_2 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_024321 PE=4 SV=1","S","Function unknown","late embryogenesis abundant protein At1g64065-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104660.graph_c2",2821,124.43,2991,124.54,2764,125.74,38,1.33,37,2.16,40,1.33,0,-6.504282097,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111392198 [Olea europaea var. sylvestris]","--","--"]
["c105556.graph_c0",104,7.91,89,6.82,63,5.94,828,77.46,745,76.98,902,82.34,9.71e-101,2.934886626,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; ","K00430|1.6e-178|oeu:111372231|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 12-like","--","--","Peroxidase","Peroxidase 12 OS=Arabidopsis thaliana OX=3702 GN=PER12 PE=1 SV=1","Peroxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27302 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","peroxidase 12-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c115582.graph_c0",86,3.61,69,2.84,91,4.31,3,0.37,5,0.28,3,0.14,3.24e-22,-4.488281188,"down","--","--","--","--","[S]","Function unknown ","--","--","Uncharacterized protein OS=Arabis alpina OX=50452 GN=AALP_AA6G198500 PE=3 SV=1","--","--","hypothetical protein AALP_AA6G198500 [Arabis alpina]","--","--"]
["c95650.graph_c0",25,0.73,24,0.62,27,0.91,0,0,1,0.02,4,0.06,3.29e-08,-3.643038521,"down","--","--","Molecular Function: RNA binding (GO:0003723);; ","K18757|9.5e-10|mus:103989640|K18757 la-related protein 1 | (RefSeq) la-related protein 1A isoform X2","[T]","Signal transduction mechanisms ","--","--","HTH La-type RNA-binding domain-containing protein OS=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) OX=431595 PE=4 SV=1","A","RNA processing and modification","hypothetical protein BCR42DRAFT_402344 [Absidia repens]","molecular function: binding (GO:0005488)","--"]
["c103308.graph_c0",56,1.02,116,2,75,1.41,4,0.08,12,0.26,5,0.09,4.36e-18,-3.656515949,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K06630|3.2e-101|ppp:112287901|K06630 14-3-3 protein epsilon | (RefSeq) 14-3-3 protein 7","[O]","Posttranslational modification, protein turnover, chaperones ","14-3-3 protein","14-3-3-like protein OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1","14-3-3 protein epsilon (Fragment) OS=Anthurium amnicola OX=1678845 GN=14-3-3epsilon PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","DNA damage checkpoint protein rad24 [Kalmanozyma brasiliensis GHG001]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101360.graph_c0",559,19.71,488,16.33,505,18.87,138,5.09,111,4.74,183,6.46,4.23e-54,-2.165498963,"down","[C]","Energy production and conversion ","Biological Process: cytokinin metabolic process (GO:0009690);; Molecular Function: cytokinin dehydrogenase activity (GO:0019139);; Molecular Function: FAD binding (GO:0071949);; ","K00279|1.8e-173|oeu:111386064|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 7-like","[C]","Energy production and conversion ","FAD binding domain;; Cytokinin dehydrogenase 1, FAD and cytokinin binding;; Cytokinin dehydrogenase 1, FAD and cytokinin binding","Cytokinin dehydrogenase 7 OS=Arabidopsis thaliana OX=3702 GN=CKX7 PE=1 SV=1","Cytokinin dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18198 PE=3 SV=1","C","Energy production and conversion","cytokinin dehydrogenase 7-like, partial [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Zeatin biosynthesis (ko00908)"]
["c112316.graph_c0",130,6.55,153,9.23,154,8.04,419,30.71,282,19.89,414,27.42,2e-10,1.012457003,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: methylation (GO:0032259);; ","K23870|3.8e-172|oeu:111396210|K23870 putative pectin methyltransferase [EC:2.1.1.-] | (RefSeq) probable methyltransferase PMT5 isoform X1","--","--","Putative S-adenosyl-L-methionine-dependent methyltransferase;; Putative S-adenosyl-L-methionine-dependent methyltransferase;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain","Probable methyltransferase PMT5 OS=Arabidopsis thaliana OX=3702 GN=At2g03480 PE=2 SV=2","Methyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22321 PE=3 SV=1","S","Function unknown","probable methyltransferase PMT5 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c114385.graph_c3",376571,18240.88,384736,18030.84,366900,18167.72,133353,6685.67,100525,5711.5,116936,5789.57,2.04e-227,-2.008516415,"down","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20623|3.3e-275|oeu:111387769|K20623 typhasterol/6-deoxotyphasterol 2alpha-hydroxylase | (RefSeq) cytochrome P450 71A1-like","[R]","General function prediction only ","Cytochrome P450","Trimethyltridecatetraene synthase OS=Zea mays OX=4577 GN=CYP92C6 PE=1 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009724 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 71A1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Brassinosteroid biosynthesis (ko00905)"]
["c110478.graph_c3",86,26.97,86,25.78,89,28.29,37,11.63,28,10.04,24,7.28,1.37e-10,-1.832068849,"down","--","--","--","--","--","--","--","Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP9 PE=1 SV=1","probable plastid-lipid-associated protein 13, chloroplastic OS=Nicotiana tabacum OX=4097 GN=LOC107829677 PE=4 SV=1","S","Function unknown","probable plastid-lipid-associated protein 13, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c95853.graph_c0",4,0.31,2,0.15,5,0.4,25,2,24,2.2,23,1.83,0.000482548,2.125962244,"up","[H]","Coenzyme transport and metabolism ","Biological Process: isoprenoid biosynthetic process (GO:0008299);; Molecular Function: transferase activity (GO:0016740);; ","K13789|7.1e-104|sind:105177958|K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] | (RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic","[H]","Coenzyme transport and metabolism ","Polyprenyl synthetase","Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2","Geranylgeranyl diphosphate synthase 3 OS=Leucosceptrum canum OX=694369 PE=2 SV=1","H","Coenzyme transport and metabolism","geranylgeranyl diphosphate synthase 3 [Leucosceptrum canum]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Terpenoid backbone biosynthesis (ko00900)"]
["c44263.graph_c0",720,293.37,723,272.08,647,265.31,401,167.67,382,183.96,392,161.9,4.64e-32,-1.148189313,"down","--","--","Molecular Function: NADPH-hemoprotein reductase activity (GO:0003958);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Molecular Function: FMN binding (GO:0010181);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: NADP binding (GO:0050661);; ","K00327|5.2e-17|oeu:111403616|K00327 NADPH-ferrihemoprotein reductase [EC:1.6.2.4] | (RefSeq) NADPH--cytochrome P450 reductase-like","--","--","--","NADPH--cytochrome P450 reductase OS=Catharanthus roseus OX=4058 GN=CPR PE=2 SV=1","NADPH--cytochrome P450 reductase OS=Andrographis paniculata OX=175694 GN=CPR4 PE=3 SV=1","C","Energy production and conversion","NADPH--cytochrome P450 reductase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c112883.graph_c0",160,4.11,127,2.61,116,2.74,359,8.74,371,9.5,425,9.22,4.55e-15,1.189166742,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Cellular Component: plastid inner membrane (GO:0009528);; Cellular Component: plastid (GO:0009536);; Biological Process: plastid organization (GO:0009657);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: cellular process (GO:0009987);; Biological Process: chloroplast fission (GO:0010020);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: organelle inner membrane (GO:0019866);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: envelope (GO:0031975);; Cellular Component: plastid membrane (GO:0042170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: plastid fission (GO:0043572);; Molecular Function: protein self-association (GO:0043621);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: organelle fission (GO:0048285);; Biological Process: cellular component organization or biogenesis (GO:0071840);; ","--","--","--","Protein of unknown function (DUF4101)","Plastid division protein CDP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDP1 PE=1 SV=2","DUF4101 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09823 PE=4 SV=1","S","Function unknown","plastid division protein CDP1, chloroplastic isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020)","--"]
["c109556.graph_c0",159,5.22,170,5.87,141,5.14,531,19.87,490,20.15,546,21.04,4.33e-29,1.40985578,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K12818|6.3e-34|smo:SELMODRAFT_429199|K12818 ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13] | (RefSeq) hypothetical protein","[R]","General function prediction only ","Major Facilitator Superfamily;; Sugar (and other) transporter","Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=ZIFL1 PE=2 SV=1","MFS domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28989 PE=3 SV=1","S","Function unknown","protein ZINC INDUCED FACILITATOR-LIKE 1-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","Spliceosome (ko03040)"]
["c115328.graph_c0",625,31.38,386,18.74,393,20.93,1668,83.19,1652,93.35,1882,93.26,4.94e-11,1.542551494,"up","[IR]","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: fatty acid metabolic process (GO:0006631);; Molecular Function: acetylesterase activity (GO:0008126);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: cellular process (GO:0009987);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Molecular Function: short-chain carboxylesterase activity (GO:0034338);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule metabolic process (GO:0044281);; Molecular Function: carboxylic ester hydrolase activity (GO:0052689);; Biological Process: organic substance metabolic process (GO:0071704);; ","K01206|1.4e-16|crb:17894383|K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) alpha-L-fucosidase 3","--","--","GDSL-like Lipase/Acylhydrolase;; GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana OX=3702 GN=At3g48460 PE=2 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_028342 PE=4 SV=1","S","Function unknown","GDSL esterase/lipase At3g48460-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Other glycan degradation (ko00511)"]
["c61396.graph_c0",17,4.36,19,4.55,17,4.44,0,0,5,1.51,4,1.04,0.000166725,-2.488667936,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02912|1.2e-42|vcn:VOLCADRAFT_72833|K02912 large subunit ribosomal protein L32e | (RefSeq) rpl32; component of cytosolic 80S ribosome and 60S large subunit","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L32","60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2","60S ribosomal protein L32 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpL32_1 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","ribosomal protein L32e [Basidiobolus meristosporus CBS 931.73]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c110201.graph_c0",20,0.42,6,0.12,15,0.33,49,1.06,50,1.23,45,0.96,0.0010462,1.413703154,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; ","K11273|0.0e+00|oeu:111396855|K11273 chromosome transmission fidelity protein 1 [EC:3.6.4.13] | (RefSeq) ATP-dependent DNA helicase DDX11 isoform X1","[L]","Replication, recombination and repair ","DEAD_2;; Helicase C-terminal domain;; Type III restriction enzyme, res subunit;; PhoH-like protein","Regulator of telomere elongation helicase 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RTEL1 PE=2 SV=1","DNA helicase OS=Striga asiatica OX=4170 GN=STAS_25510 PE=3 SV=1","L","Replication, recombination and repair","ATP-dependent DNA helicase DDX11 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)","--"]
["c110155.graph_c1",245,16.13,214,13.44,227,14.81,82,7.91,84,9.5,88,7.98,3.29e-23,-1.742165074,"down","--","--","Biological Process: cell fate specification (GO:0001708);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: cell differentiation (GO:0030154);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: cell fate commitment (GO:0045165);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: bundle sheath cell fate specification (GO:0090610);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: plant organ development (GO:0099402);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","GRAS domain family;; GRAS domain family","Scarecrow-like protein 23 OS=Arabidopsis thaliana OX=3702 GN=SCL23 PE=1 SV=1","GRAS domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_017030 PE=3 SV=1","K","Transcription","scarecrow-like protein 23 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501)","--"]
["c117576.graph_c0",2477,21.24,2859,23.24,2556,22.61,1680,14.73,1371,13.76,1746,15.24,1.5e-54,-1.042876044,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","K22048|5.0e-250|oeu:111379567|K22048 mechanosensitive ion channel protein 4/5/6/7/8/9/10 | (RefSeq) mechanosensitive ion channel protein 10-like isoform X1","[M]","Cell wall/membrane/envelope biogenesis ","--","Mechanosensitive ion channel protein 9 OS=Arabidopsis thaliana OX=3702 GN=MSL9 PE=1 SV=1","Mechanosensitive ion channel protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26076 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","mechanosensitive ion channel protein 10-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c111062.graph_c1",76,6.83,81,6.98,47,4.64,364,37.06,531,61.51,582,58.84,1.05e-37,2.514492878,"up","[R]","General function prediction only ","Molecular Function: O-methyltransferase activity (GO:0008171);; ","K00588|7.9e-134|oeu:111387945|K00588 caffeoyl-CoA O-methyltransferase [EC:2.1.1.104] | (RefSeq) caffeoyl-CoA O-methyltransferase-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","O-methyltransferase;; Methyltransferase domain","Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera OX=29760 PE=2 SV=1","Caffeoyl-CoA O-methyltransferase OS=Fraxinus mandshurica OX=56029 GN=CCoAOMT PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","caffeoyl CoA-O- methyl-transferas [Fraxinus mandshurica]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)"]
["c110873.graph_c1",4,0.21,4,0.2,6,0.33,121,6.53,83,5.13,122,6.55,2.77e-20,3.973818371,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103862.graph_c2",296,26.01,284,23.58,238,21.48,863,77.6,1156,119.13,1230,109.97,2.15e-38,1.664540296,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K22425|9.2e-82|oeu:111404214|K22425 oleuropein beta-glucosidase [EC:3.2.1.206] | (RefSeq) beta-glucosidase","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolase family 1","Oleuropein beta-glucosidase OS=Olea europaea OX=4146 GN=GLU PE=1 SV=1","Beta-glucosidase OS=Olea europaea OX=4146 GN=bglc PE=2 SV=1","G","Carbohydrate transport and metabolism","beta-glucosidase-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c110264.graph_c1",2567,69.73,2554,66.73,2389,68.74,1458,40.78,1262,40.17,1329,37.92,2.97e-73,-1.211429716,"down","[L]","Replication, recombination and repair ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: signaling receptor binding (GO:0005102);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: cellular process (GO:0009987);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: ligase activity (GO:0016874);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: protein modification process (GO:0036211);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Molecular Function: transmembrane receptor protein serine/threonine kinase binding (GO:0070696);; Biological Process: organic substance metabolic process (GO:0071704);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K10260|2.6e-14|csl:COCSUDRAFT_23114|K10260 F-box and WD-40 domain protein 7 | (RefSeq) WD40 repeat-like protein","[S]","Function unknown ","U-box domain;; Armadillo/beta-catenin-like repeat;; Kinesin-associated protein (KAP)","U-box domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=PUB6 PE=2 SV=2","RING-type E3 ubiquitin transferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12238 PE=4 SV=1","S","Function unknown","U-box domain-containing protein 45 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","Ubiquitin mediated proteolysis (ko04120)"]
["c81604.graph_c0",24,1.6,81,5.09,39,2.67,0,0,0,0,0,0,1.21e-13,-5.887827359,"down","--","--","--","--","--","--","Lipase","--","--","--","--","pancreatic lipase-related protein 2-like [Rhodamnia argentea]","--","--"]
["c95265.graph_c0",188,8.15,47,1.93,62,2.77,18,0.8,16,0.81,15,0.66,2.8e-05,-2.591783722,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: pectin catabolic process (GO:0045490);; Molecular Function: metal ion binding (GO:0046872);; ","K01728|8.3e-251|oeu:111372517|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) pectate lyase-like","--","--","Pectate lyase;; Pectate lyase, N terminus","Pectate lyase OS=Lilium longiflorum OX=4690 PE=2 SV=1","Pectate lyase OS=Dorcoceras hygrometricum OX=472368 GN=F511_32722 PE=3 SV=1","G","Carbohydrate transport and metabolism","pectate lyase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Pentose and glucuronate interconversions (ko00040)"]
["c100366.graph_c1",3830,112.33,3600,98.78,3507,107.68,436,11.41,478,13.11,584,13.92,0,-3.187864177,"down","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K05681|7.4e-174|nau:109228191|K05681 ATP-binding cassette, subfamily G (WHITE), member 2 | (RefSeq) ABC transporter G family member 9-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter;; ABC-2 type transporter;; AAA domain, putative AbiEii toxin, Type IV TA system;; ABC-2 type transporter","ABC transporter G family member 14 OS=Arabidopsis thaliana OX=3702 GN=ABCG14 PE=1 SV=1","Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14841 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 14-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","ABC transporters (ko02010)"]
["c96987.graph_c0",385,15.91,283,11.06,273,11.63,894,40.08,767,40.32,966,43.73,3.32e-22,1.150327104,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; ","--","--","--","--","Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1","protodermal factor 1-like OS=Nicotiana tabacum OX=4097 GN=LOC107786119 PE=4 SV=1","S","Function unknown","protodermal factor 1-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576)","--"]
["c114561.graph_c1",1024,25.71,1051,25.91,965,24.97,548,15.7,546,18.68,609,17.61,6.79e-45,-1.156229166,"down","[HC]","--","Cellular Component: chloroplast (GO:0009507);; Molecular Function: zeaxanthin epoxidase [overall] activity (GO:0009540);; Biological Process: abscisic acid biosynthetic process (GO:0009688);; Cellular Component: membrane (GO:0016020);; Molecular Function: FAD binding (GO:0071949);; ","K09838|1.7e-136|oeu:111383342|K09838 zeaxanthin epoxidase [EC:1.14.15.21] | (RefSeq) zeaxanthin epoxidase, chloroplastic","[CR]","--","FHA domain;; FAD binding domain","Zeaxanthin epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ZEP PE=1 SV=1","Zeaxanthin epoxidase, chloroplastic OS=Corchorus capsularis OX=210143 GN=CCACVL1_26372 PE=4 SV=1","C","Energy production and conversion","zeaxanthin epoxidase, chloroplastic [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488)","Carotenoid biosynthesis (ko00906)"]
["c104963.graph_c0",14,0.71,18,0.86,13,0.67,61,3.14,117,6.96,96,4.92,1.06e-09,2.214849207,"up","--","--","Molecular Function: diacylglycerol kinase activity (GO:0004143);; ","K03283|7.8e-11|qsu:112029738|K03283 heat shock 70kDa protein 1/2/6/8 | (RefSeq) heat shock 70 kDa protein-like","--","--","C1 domain;; Phorbol esters/diacylglycerol binding domain (C1 domain)","--","Diacylglycerol kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_30363 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111396739 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Spliceosome (ko03040);; Protein processing in endoplasmic reticulum (ko04141);; Endocytosis (ko04144)"]
["c107417.graph_c0",332,15.29,373,16.54,360,18.14,2628,139.79,2080,129.08,2410,127.56,2.86e-168,2.410627008,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324);; Cellular Component: chloroplast (GO:0009507);; ","K02641|1.1e-199|oeu:111381891|K02641 ferredoxin--NADP+ reductase [EC:1.18.1.2] | (RefSeq) ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic isoform X1","[C]","Energy production and conversion ","Oxidoreductase NAD-binding domain;; Oxidoreductase FAD-binding domain","Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PETH PE=2 SV=1","Ferredoxin--NADP reductase, chloroplastic OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05217 PE=3 SV=1","C","Energy production and conversion","ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Photosynthesis (ko00195)"]
["c83890.graph_c0",12,0.72,1,0.08,4,0.25,48,3.11,26,2.41,41,2.58,6.36e-05,2.208722271,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Molecular Function: transcription factor binding (GO:0008134);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity (GO:0016740);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Biological Process: protein modification process (GO:0036211);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","F-box-like;; F-box domain;; Kelch motif","--","F-box domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_003748 PE=4 SV=1","S","Function unknown","F-box protein At5g49610-like [Coffea arabica]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c71638.graph_c0",10,1.63,16,2.44,4,0.66,69,11.49,77,14.71,91,15.04,7.96e-11,2.552208442,"up","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_035147 PE=4 SV=1","--","--","hypothetical protein C3L33_16140, partial [Rhododendron williamsianum]","--","--"]
["c103431.graph_c1",2,0.13,5,0.31,9,0.54,37,2.65,26,2.13,45,3.2,3.74e-05,2.212827397,"up","[T]","Signal transduction mechanisms ","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: metal ion binding (GO:0046872);; ","K06269|5.3e-159|pxb:103939751|K06269 serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] | (RefSeq) serine/threonine-protein phosphatase PP1 isoform X1","[TR]","--","Calcineurin-like phosphoesterase;; Serine-threonine protein phosphatase N-terminal domain","Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus OX=35862 PE=3 SV=1","Serine/threonine-protein phosphatase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1","T","Signal transduction mechanisms","serine/threonine-protein phosphatase alpha-2 isoform [Rhodamnia argentea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","mRNA surveillance pathway (ko03015)"]
["c103798.graph_c0",20,0.83,19,0.75,15,0.64,94,4.01,138,6.74,130,5.56,3.25e-14,2.365120648,"up","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Biological Process: proteolysis (GO:0006508);; Biological Process: protein catabolic process (GO:0030163);; ","K22683|5.6e-48|ccaj:109791702|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal;; Eukaryotic aspartyl protease","Probable aspartyl protease At4g16563 OS=Arabidopsis thaliana OX=3702 GN=At4g16563 PE=2 SV=1","Peptidase A1 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a025649mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable aspartyl protease At4g16563 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c101545.graph_c0",3,0.34,0,0,3,0.1,36,1.16,58,2.14,49,1.62,4.18e-10,3.753798265,"up","--","--","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: L-ascorbate oxidase activity (GO:0008447);; ","K19791|2.9e-148|var:108335831|K19791 iron transport multicopper oxidase | (RefSeq) L-ascorbate oxidase homolog","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana OX=3702 GN=SKS1 PE=2 SV=1","Multicopper oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16631 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","monocopper oxidase-like protein SKS1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c112012.graph_c0",542,114.62,629,128.72,587,131.26,130,30.39,130,35.73,153,35.58,4.66e-82,-2.403130804,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","HIG1 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15346 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111384874 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c115643.graph_c0",138,7.72,172,9.42,155,9.34,97,2.33,88,1.83,90,2.22,3.68e-08,-1.067943565,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K22733|5.6e-90|cit:102612526|K22733 magnesium transporter | (RefSeq) uncharacterized protein LOC102612526","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; PPR repeat family;; PPR repeat","Pentatricopeptide repeat-containing protein At2g17210 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E77 PE=3 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11365 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At2g17210 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c101100.graph_c0",5,0.12,7,0.18,4,0.13,61,2.5,51,2.41,54,2.01,9.65e-10,2.861733216,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_248020 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111391006 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110231.graph_c1",4,1.39,5,1.57,10,2.93,46,2.94,67,4.9,86,5.46,2.79e-10,2.872941075,"up","--","--","Molecular Function: N-acetyltransferase activity (GO:0008080);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_05789 PE=4 SV=1","S","Function unknown","increased DNA methylation 1 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","--"]
["c111375.graph_c0",33,1.1,53,1.74,27,0.99,27,1.07,10,0.47,13,0.5,0.001420279,-1.415328042,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; ","K20456|1.8e-14|oeu:111390304|K20456 oxysterol-binding protein 1 | (RefSeq) oxysterol-binding protein-related protein 1C-like","[I]","Lipid transport and metabolism ","B3 DNA binding domain","Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1","B3 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc04681 PE=4 SV=1","K","Transcription","B3 domain-containing protein REM16-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c110824.graph_c0",56,0.96,70,1.13,52,0.91,147,2.57,132,2.65,178,3.1,3.45e-06,1.022397156,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein BYPASS1-related","Protein ROH1 OS=Arabidopsis thaliana OX=3702 GN=ROH1 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22298 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111380484 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c95930.graph_c0",9,0.93,13,1.27,7,0.74,59,6.06,111,13.07,95,9.7,4.4e-12,2.755504533,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K01510|2.5e-22|peq:110028934|K01510 apyrase [EC:3.6.1.5] | (RefSeq) probable apyrase 6 isoform X1","--","--","Protein of unknown function (DUF679)","Protein DMP2 OS=Arabidopsis thaliana OX=3702 GN=DMP2 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20784 PE=3 SV=1","S","Function unknown","protein DMP2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240)"]
["c66247.graph_c0",17,3.7,45,9.74,21,4.95,0,0,2,0.55,1,0.24,5.33e-09,-4.140601007,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; ","K02908|3.6e-23|ppp:112277110|K02908 large subunit ribosomal protein L30e | (RefSeq) 60S ribosomal protein L30-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family","60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1","60S ribosomal protein L30 OS=Anthurium amnicola OX=1678845 GN=RpL30_0 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L30-like [Physcomitrium patens]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c105233.graph_c0",31,3.4,29,3.01,21,2.37,4,0.39,1,0.11,7,0.68,9.83e-07,-2.791834781,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c90812.graph_c0",18,1.22,33,2.38,17,1.18,155,10.75,109,8.66,139,9.58,3.42e-14,2.194319343,"up","--","--","Biological Process: chlororespiration (GO:0010478);; ","--","--","--","--","Protein POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PIFI PE=2 SV=1","uncharacterized protein LOC107830728 OS=Nicotiana tabacum OX=4097 GN=LOC107830728 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111386345 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c115742.graph_c1",262,5.94,233,5.42,228,5.7,1197,29.33,1068,29.33,1165,26.89,7.36e-83,1.918255977,"up","[I]","Lipid transport and metabolism ","Molecular Function: long-chain fatty acid [acyl-carrier-protein] ligase activity (GO:0008922);; ","K01897|0.0e+00|oeu:111389294|K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] | (RefSeq) probable acyl-activating enzyme 16, chloroplastic","[I]","Lipid transport and metabolism ","AMP-binding enzyme","Probable acyl-activating enzyme 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AAE16 PE=2 SV=1","4-coumarate--CoA ligase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04598 PE=4 SV=1","I","Lipid transport and metabolism","probable acyl-activating enzyme 16, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Fatty acid biosynthesis (ko00061);; Fatty acid degradation (ko00071);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)"]
["c113556.graph_c0",89,1.34,58,0.78,51,0.74,180,3.39,173,3.53,230,4.51,3.46e-08,1.215900764,"up","[L]","Replication, recombination and repair ","Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: endonuclease activity (GO:0004519);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleotide-excision repair (GO:0006289);; ","K10846|0.0e+00|oeu:111368077|K10846 DNA excision repair protein ERCC-5 | (RefSeq) DNA repair protein UVH3-like","[L]","Replication, recombination and repair ","XPG N-terminal domain;; XPG I-region","DNA repair protein UVH3 OS=Arabidopsis thaliana OX=3702 GN=UVH3 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004669 PE=3 SV=1","L","Replication, recombination and repair","DNA repair protein UVH3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)","Nucleotide excision repair (ko03420)"]
["c106074.graph_c1",0,0,3,0.06,1,0.02,20,0.41,15,0.36,18,1.08,0.00027029,2.752433431,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","K17086|1.6e-51|fve:101300290|K17086 transmembrane 9 superfamily member 2/4 | (RefSeq) uncharacterized LOC101300290","--","--","SWIM zinc finger","--","Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa023172mg PE=4 SV=1","--","--","uncharacterized protein LOC111409429 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c86033.graph_c1",13,2.29,18,2.97,10,1.8,64,11.55,34,7.04,41,7.34,0.001395903,1.370671672,"up","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K13493|1.7e-22|ath:AT5G05870|K13493 cytokinin-N-glucosyltransferase [EC:2.4.1.-] | (RefSeq) UGT76C1; UDP-glucosyl transferase 76C1","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glucose iridoid glucosyltransferase OS=Catharanthus roseus OX=4058 GN=UGT76A2 PE=1 SV=1","UDP-glucuronosyltransferase OS=Solanum tuberosum OX=4113 PE=4 SV=1","--","--","UDP-glycosyltransferase 76B1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Zeatin biosynthesis (ko00908)"]
["c110172.graph_c0",9,0.54,3,0.2,0,0,28,1.48,25,1.87,41,2.45,9.4e-05,2.359610313,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c94121.graph_c0",1,0.09,3,0.24,1,0.04,27,1.29,33,2.21,46,3.12,5.49e-08,3.514821392,"up","--","--","Molecular Function: translation initiation factor activity (GO:0003743);; Biological Process: male meiosis II (GO:0007142);; ","--","--","--","--","--","Putative transcription initiation factor TFIID subunit 7-like (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030346 PE=4 SV=1","--","--","uncharacterized protein LOC111401528 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c96719.graph_c0",232,16.69,195,13.08,208,13.12,96,6.39,99,6.59,106,7.69,2.42e-15,-1.389154206,"down","--","--","--","--","--","--","--","--","--","--","--","protein VAC14 homolog [Olea europaea var. sylvestris]","--","--"]
["c116094.graph_c2",724,21.56,772,22.88,706,21.31,376,17.59,349,20.54,400,17.5,8.04e-43,-1.28891557,"down","[I]","Lipid transport and metabolism ","Molecular Function: phospholipase D activity (GO:0004630);; Biological Process: phosphatidic acid biosynthetic process (GO:0006654);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: inositol lipid-mediated signaling (GO:0048017);; Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);; ","K01115|9.7e-190|oeu:111389896|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D zeta 1-like isoform X1","[I]","Lipid transport and metabolism ","PLD-like domain;; Phospholipase D Active site motif","Phospholipase D zeta 1 OS=Arabidopsis thaliana OX=3702 GN=PLDZETA1 PE=1 SV=1","Phospholipase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17292 PE=3 SV=1","I","Lipid transport and metabolism","phospholipase D zeta 1-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)"]
["c117661.graph_c2",4,0.17,6,0.24,4,0.18,24,1.04,21,1.05,30,1.44,0.00104353,1.896692488,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107772.graph_c0",29,1.39,20,1.14,23,1.09,86,2.9,110,4.07,107,3.81,1.45e-08,1.710446133,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K15111|5.2e-104|oeu:111373058|K15111 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 | (RefSeq) S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1","[C]","Energy production and conversion ","Mitochondrial carrier protein;; Mitochondrial carrier protein","S-adenosylmethionine carrier 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAMC1 PE=1 SV=1","S-adenosylmethionine transporter OS=Solanum tuberosum OX=4113 GN=102579591 PE=3 SV=1","C","Energy production and conversion","S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105723.graph_c0",128,5.96,116,4.95,93,4.42,54,2.27,69,3.37,64,2.65,1.17e-06,-1.14797174,"down","--","--","Biological Process: malate transport (GO:0015743);; Cellular Component: integral component of membrane (GO:0016021);; ","K03695|5.6e-25|egr:104416563|K03695 ATP-dependent Clp protease ATP-binding subunit ClpB | (RefSeq) chaperone protein ClpB1-like","[R]","General function prediction only ","Aluminium activated malate transporter;; Fusaric acid resistance protein-like","Aluminum-activated malate transporter 8 OS=Arabidopsis thaliana OX=3702 GN=ALMT8 PE=3 SV=1","Putative membrane protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08575 PE=3 SV=1","S","Function unknown","aluminum-activated malate transporter 8-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c92053.graph_c0",120,7.17,117,6.61,89,5.47,307,18.91,451,31.86,461,28.23,3.14e-18,1.573613484,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; ","K13448|4.4e-87|oeu:111405234|K13448 calcium-binding protein CML | (RefSeq) calcium-binding allergen Ole e 8-like","[T]","Signal transduction mechanisms ","EF hand;; EF-hand domain pair;; EF hand;; EF-hand domain;; EF-hand domain pair;; Secreted protein acidic and rich in cysteine Ca binding region","Calcium-binding allergen Ole e 8 OS=Olea europaea OX=4146 PE=1 SV=1","Calmodulin and related proteins (EF-Hand superfamily) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03619 PE=4 SV=1","T","Signal transduction mechanisms","calcium-binding allergen Ole e 8-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c95262.graph_c0",21,0.62,21,0.58,26,0.79,0,0,10,0.34,5,0.15,0.000284536,-2.21540982,"down","[L]","Replication, recombination and repair ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; ","K12823|1.4e-145|mng:MNEG_7555|K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] | (RefSeq) ATP-dependent RNA helicase DDX5/DBP2","[A]","RNA processing and modification ","DEAD/DEAH box helicase;; Helicase conserved C-terminal domain","DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1","ATP-dependent RNA helicase p62 OS=Anthurium amnicola OX=1678845 GN=Rm62_1 PE=3 SV=1","A","RNA processing and modification","hypothetical protein M406DRAFT_271384 [Cryphonectria parasitica EP155]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","Spliceosome (ko03040)"]
["c104525.graph_c1",19,2.93,19,2.75,21,3.31,4,0.63,1,0.18,3,0.47,1.16e-05,-2.809125049,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116877.graph_c0",3,0.22,5,0.09,6,0.12,197,6.48,217,6.78,184,5.64,4.28e-34,4.853503311,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K12349|3.5e-105|ccaj:109806181|K12349 neutral ceramidase [EC:3.5.1.23] | (RefSeq) neutral ceramidase-like","[R]","General function prediction only ","Retroviral aspartyl protease;; Retrotransposon gag protein;; Aspartyl protease;; gag-polyprotein putative aspartyl protease;; Integrase zinc binding domain;; Integrase core domain","--","Integrase catalytic domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC113756011 [Coffea eugenioides]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Sphingolipid metabolism (ko00600)"]
["c113497.graph_c0",82,5.79,99,6.28,81,4.98,5,0.84,11,3.15,14,3.56,2.31e-20,-3.32076542,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855);; ","K12447|4.4e-111|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Copia protein OS=Vitis vinifera OX=29760 GN=GIP_46 PE=4 SV=1","L","Replication, recombination and repair","Copia protein [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c96107.graph_c0",30,1.94,50,3.05,44,2.93,175,11.43,156,11.66,184,11.94,2.17e-13,1.705013784,"up","--","--","--","--","--","--","NLI interacting factor-like phosphatase","--","FCP1 homology domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_09532 PE=4 SV=1","S","Function unknown","uncharacterized FCP1 homology domain-containing protein C1271.03c-like [Olea europaea var. sylvestris]","--","--"]
["c100736.graph_c0",103,8.58,112,8.87,86,7.6,278,24.54,265,27.12,279,24.31,1.39e-11,1.122248572,"up","--","--","Biological Process: ribosomal large subunit assembly (GO:0000027);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytosolic ribosome (GO:0022626);; ","K14815|4.1e-126|oeu:111409780|K14815 mRNA turnover protein 4 | (RefSeq) mRNA turnover protein 4 homolog","[A]","RNA processing and modification ","Insertion domain in 60S ribosomal protein L10P;; Ribosomal protein L10","--","Ribosome assembly factor mrt4 OS=Coffea canephora OX=49390 GN=GSCOC_T00014894001 PE=3 SV=1","A","RNA processing and modification","mRNA turnover protein 4 homolog [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991)","--"]
["c87145.graph_c1",0,0,1,0.08,0,0,27,2.04,55,4.76,54,4.06,1e-10,4.916329974,"up","--","--","--","--","--","--","--","--","DUF4378 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13519 PE=4 SV=1","--","--","uncharacterized protein LOC111386835 [Olea europaea var. sylvestris]","--","--"]
["c108315.graph_c0",81,2.56,76,2.58,85,2.42,223,8.22,258,10.86,268,11.05,1.96e-12,1.295856089,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111558.graph_c1",57,5.21,59,3.92,35,2.89,29,2.33,28,2.51,30,3.16,0.001678223,-1.076749767,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111369520 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c106041.graph_c0",227,7.58,237,7.15,215,6.69,114,2.99,101,3.76,132,3.07,2.41e-15,-1.284830856,"down","--","--","Molecular Function: kinase activity (GO:0016301);; ","K08880|3.4e-61|oeu:111396768|K08880 serine/threonine kinase 19 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase 19 isoform X1","--","--","Serine-threonine protein kinase 19","--","Putative serine/threonine-protein kinase 19 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_037462 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111396768 isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c96552.graph_c0",1233,64.95,1220,61.91,1064,57.28,125,7.66,133,8.75,172,10.69,4.48e-206,-3.344375701,"down","[T]","Signal transduction mechanisms ","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: metal ion binding (GO:0046872);; ","K14379|1.9e-171|oeu:111374799|K14379 tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2] | (RefSeq) purple acid phosphatase 17","[O]","Posttranslational modification, protein turnover, chaperones ","Calcineurin-like phosphoesterase","Purple acid phosphatase 17 OS=Arabidopsis thaliana OX=3702 GN=PAP17 PE=2 SV=1","Purple acid phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21204 PE=3 SV=1","G","Carbohydrate transport and metabolism","purple acid phosphatase 17 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Riboflavin metabolism (ko00740)"]
["c102304.graph_c3",71,1.45,63,1.22,50,1.08,5,0.11,4,0.1,11,0.26,4.89e-15,-3.343605268,"down","--","--","Biological Process: immune system process (GO:0002376);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: immune response (GO:0006955);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: cell death (GO:0008219);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: plant-type hypersensitive response (GO:0009626);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: cellular process (GO:0009987);; Biological Process: programmed cell death (GO:0012501);; Cellular Component: membrane (GO:0016020);; Biological Process: signaling (GO:0023052);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: host programmed cell death induced by symbiont (GO:0034050);; Biological Process: response to external biotic stimulus (GO:0043207);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: innate immune response (GO:0045087);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; Biological Process: defense response to other organism (GO:0098542);; ","K13453|1.3e-112|sly:101263413|K13453 disease resistance protein | (RefSeq) putative late blight resistance protein homolog R1A-4","[T]","Signal transduction mechanisms ","NB-ARC domain","Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1","NB-ARC domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a020693mg PE=4 SV=1","T","Signal transduction mechanisms","putative late blight resistance protein homolog R1A-10 isoform X1 [Olea europaea var. sylvestris]","biological process: immune system process (GO:0002376);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c56124.graph_c0",417,53.81,533,64.55,526,69.54,238,31.41,172,26.01,261,34.18,5.82e-26,-1.461282226,"down","[IQ]","--","Molecular Function: catalytic activity (GO:0003824);; ","K23618|1.5e-39|aly:9324545|K23618 acyl-activating enzyme 11/12 [EC:6.2.1.2 6.2.1.-] | (RefSeq) butyrate--CoA ligase AAE11, peroxisomal","[I]","Lipid transport and metabolism ","AMP-binding enzyme","Probable acyl-activating enzyme 5, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE5 PE=1 SV=1","4-coumarate--CoA ligase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14824 PE=4 SV=1","I","Lipid transport and metabolism","probable acyl-activating enzyme 6 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c115754.graph_c0",309,6.84,319,6.5,259,5.48,128,2.71,110,2.74,112,2.39,1.14e-26,-1.649944819,"down","[N]","Cell motility ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|1.1e-81|han:110929858|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160-like","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00033662001 PE=4 SV=1","T","Signal transduction mechanisms","MDIS1-interacting receptor like kinase 2-like [Coffea arabica]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c114126.graph_c0",0,0,0,0,1,0.65,45,7.83,60,13.2,46,8.76,9.52e-12,5.082375747,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106170.graph_c0",461,24.34,527,24.72,488,30.04,247,13.87,208,11.55,258,12.45,7.39e-32,-1.369820823,"down","[I]","Lipid transport and metabolism ","Biological Process: lipid metabolic process (GO:0006629);; ","K16818|3.0e-06|sita:101779020|K16818 phospholipase A1 [EC:3.1.1.32] | (RefSeq) phospholipase A(1) DAD1, chloroplastic","[I]","Lipid transport and metabolism ","Lipase (class 3);; Protein of unknown function (DUF2974)","Triacylglycerol lipase OBL1 OS=Arabidopsis thaliana OX=3702 GN=OBL1 PE=1 SV=1","Lipase_3 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008893mg PE=4 SV=1","G","Carbohydrate transport and metabolism","lipase [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Glycerophospholipid metabolism (ko00564);; alpha-Linolenic acid metabolism (ko00592)"]
["c86397.graph_c0",0,0,1,0.02,0,0,47,0.83,72,1.46,77,1.35,1.09e-13,5.417968794,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|2.1e-50|pda:103696970|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) brassinosteroid LRR receptor kinase BRI1-like","--","--","Leucine rich repeat;; Protein kinase domain;; Leucine Rich repeats (2 copies);; Protein tyrosine and serine/threonine kinase;; Leucine Rich Repeat;; Leucine Rich repeat;; Leucine rich repeat N-terminal domain","Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana OX=3702 GN=At4g36180 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25396 PE=3 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c117457.graph_c3",48,2.52,68,3.65,73,4.46,219,13.2,243,17.13,278,16.58,6.79e-16,1.626119039,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: polysaccharide binding (GO:0030247);; ","K23544|5.9e-95|brp:103842861|K23544 serine incorporator 1/3 | (RefSeq) serine incorporator 3","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Wall-associated receptor kinase galacturonan-binding;; EGF-like domain;; Calcium-binding EGF domain;; EGF domain","Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11905 PE=4 SV=1","--","--","wall-associated receptor kinase-like 1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109885.graph_c0",26,1.33,13,0.63,15,0.79,58,3.03,52,3.11,76,3.99,0.000168157,1.399538221,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96701.graph_c0",1,0.06,2,0.11,4,0.24,23,1.39,19,1.32,23,1.39,0.000209277,2.48264858,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034067 PE=4 SV=1","--","--","uncharacterized protein LOC111369337 [Olea europaea var. sylvestris]","--","--"]
["c104586.graph_c1",0,0,0,0,0,0,19,0.65,16,0.61,26,0.9,8.55e-07,4.327488287,"up","--","--","Molecular Function: cysteine-type endopeptidase activity (GO:0004197);; Molecular Function: thiol-dependent ubiquitin-specific protease activity (GO:0004843);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytosol (GO:0005829);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein deubiquitination (GO:0016579);; ","K11851|7.0e-24|oeu:111373011|K11851 ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1","--","--","--","Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana OX=3702 GN=UBP27 PE=2 SV=1","Ubiquitin carboxyl-terminal hydrolase (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a0249452mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin carboxyl-terminal hydrolase 27 isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","--"]
["c114877.graph_c0",19,0.33,14,0.44,34,0.88,66,3.42,59,3.85,58,3.72,0.004269026,1.07579655,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14451 PE=4 SV=1","S","Function unknown","nitrate regulatory gene2 protein-like [Olea europaea var. sylvestris]","--","--"]
["c109331.graph_c0",22,0.82,16,0.57,17,0.74,42,1.69,60,3.05,91,4.24,0.000187397,1.422192936,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G470800 PE=4 SV=1","--","--","uncharacterized protein LOC7471709 [Populus trichocarpa]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112269.graph_c0",1447,95.65,1571,97.57,1381,95.09,344,27.83,312,27.68,338,26.65,4.62e-192,-2.462667825,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity (GO:0004514);; Molecular Function: nicotinate phosphoribosyltransferase activity (GO:0004516);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to stress (GO:0006950);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: biological_process (GO:0008150);; Biological Process: NAD biosynthetic process (GO:0009435);; Molecular Function: ligase activity (GO:0016874);; Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; ","K00763|1.3e-31|oeu:111400216|K00763 nicotinate phosphoribosyltransferase [EC:6.3.4.21] | (RefSeq) nicotinate phosphoribosyltransferase 1-like","[H]","Coenzyme transport and metabolism ","--","Nicotinate phosphoribosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=NAPRT2 PE=2 SV=1","Nicotinate phosphoribosyltransferase OS=Asparagus officinalis OX=4686 GN=A4U43_C04F25200 PE=3 SV=1","H","Coenzyme transport and metabolism","Nicotinate phosphoribosyltransferase [Capsicum annuum]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c103752.graph_c0",956,44.23,1059,46.31,885,42.12,536,25.34,414,22.43,519,24.42,2.49e-46,-1.302153267,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013333mg PE=4 SV=1","--","--","uncharacterized protein LOC111372529 [Olea europaea var. sylvestris]","--","--"]
["c113516.graph_c3",33,3.55,41,4.27,40,4.19,152,15.89,103,12.37,176,18.34,1.18e-09,1.555690139,"up","--","--","Molecular Function: guanylate kinase activity (GO:0004385);; ","K00942|1.8e-15|oeu:111399539|K00942 guanylate kinase [EC:2.7.4.8] | (RefSeq) guanylate kinase 2-like isoform X1","--","--","--","--","Guanylate kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07305 PE=3 SV=1","F","Nucleotide transport and metabolism","guanylate kinase 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Purine metabolism (ko00230)"]
["c112803.graph_c0",12,0.39,10,0.27,8,0.2,75,2.06,115,3.65,108,3.01,9e-15,2.88043348,"up","[V]","Defense mechanisms ","Cellular Component: nuclear heterochromatin (GO:0005720);; Biological Process: maintenance of DNA methylation (GO:0010216);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: ubiquitin protein ligase activity (GO:0061630);; ","K10638|1.6e-263|oeu:111396123|K10638 E3 ubiquitin-protein ligase UHRF1 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like","--","--","SAD/SRA domain;; Ring finger domain;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; zinc finger of C3HC4-type, RING;; PHD-finger;; zinc-RING finger domain","E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana OX=3702 GN=ORTH2 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002386mg PE=4 SV=1","B","Chromatin structure and dynamics","E3 ubiquitin-protein ligase ORTHRUS 2-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c87946.graph_c2",24,8.71,41,13.79,45,16.49,8,2.98,15,6.43,19,7,0.000259938,-1.625391901,"down","[P]","Inorganic ion transport and metabolism ","Molecular Function: catalase activity (GO:0004096);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; ","K03781|2.8e-69|oeu:111397533|K03781 catalase [EC:1.11.1.6] | (RefSeq) catalase","[P]","Inorganic ion transport and metabolism ","Catalase","Catalase isozyme 1 OS=Gossypium hirsutum OX=3635 GN=CAT1 PE=2 SV=2","Catalase OS=Panax ginseng OX=4054 GN=Cat1 PE=2 SV=1","P","Inorganic ion transport and metabolism","catalase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; molecular function: binding (GO:0005488)","Tryptophan metabolism (ko00380);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; MAPK signaling pathway - plant (ko04016);; Peroxisome (ko04146)"]
["c93545.graph_c0",2,0.1,2,0.09,2,0.1,37,1.85,80,4.67,88,4.38,3.19e-13,4.239516801,"up","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","K20720|2.0e-20|soe:110777011|K20720 reticulon-4 | (RefSeq) reticulon-like protein B21 isoform X1","--","--","Reticulon;; Reticulon","Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1","Reticulon-like protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_23158 PE=4 SV=1","S","Function unknown","reticulon-like protein B17 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c116969.graph_c0",44,0.79,30,0.5,38,0.69,20,0.36,20,0.41,28,0.5,0.009599032,-1.010533167,"down","--","--","--","K10268|4.2e-56|aof:109825399|K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 20-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Reverse transcriptase Ty1/copia-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_12717 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein F511_12717 [Dorcoceras hygrometricum]","--","--"]
["c103524.graph_c0",5,0.19,7,0.28,11,0.47,31,1.18,42,1.97,60,2.52,1.8e-05,2.055327908,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: binding (GO:0005488);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","[L]","Replication, recombination and repair ","--","Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana OX=3702 GN=CID7 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_012722 PE=4 SV=1","L","Replication, recombination and repair","polyadenylate-binding protein-interacting protein 7 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c90529.graph_c0",202,13.89,148,9.53,104,7.32,599,41.18,560,44.38,612,41.53,2.03e-25,1.634733989,"up","--","--","Molecular Function: intramolecular lyase activity (GO:0016872);; ","K01859|9.7e-68|pxb:103936753|K01859 chalcone isomerase [EC:5.5.1.6] | (RefSeq) chalcone--flavonone isomerase","--","--","Chalcone-flavanone isomerase;; Chalcone isomerase like;; Chalcone-flavanone isomerase","Chalcone--flavonone isomerase OS=Camellia sinensis OX=4442 GN=CHI PE=2 SV=2","Chalcone-flavonone isomerase family protein OS=Osmanthus fragrans OX=93977 GN=CHI PE=2 SV=1","G","Carbohydrate transport and metabolism","chalcone isomerase [Osmanthus fragrans]","molecular function: catalytic activity (GO:0003824)","Flavonoid biosynthesis (ko00941)"]
["c90202.graph_c0",12,0.9,3,0.21,10,0.77,32,2.48,19,1.66,42,3.25,0.008254573,1.423568321,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_10463 PE=4 SV=1","--","--","hypothetical protein A4A49_10463 [Nicotiana attenuata]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102721.graph_c3",553,24.88,602,26.94,552,26.3,348,16.25,357,19.62,335,15.44,4.01e-21,-1.030073316,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114149.graph_c0",219,6,226,6.16,220,6.05,552,14.08,712,21.21,733,19.29,2.69e-21,1.260777804,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11167 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111403970 [Olea europaea var. sylvestris]","--","--"]
["c106535.graph_c0",75,2.23,60,1.53,70,1.94,373,12.85,443,17.53,511,17.34,7.31e-42,2.349939489,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K02184|4.6e-209|sind:105170502|K02184 formin 2 | (RefSeq) formin-like protein 1","[TZ]","--","Formin Homology 2 Domain","Formin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FH1 PE=1 SV=1","Formin-like protein OS=Coffea canephora OX=49390 GN=GSCOC_T00016517001 PE=3 SV=1","--","--","formin-like protein 1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c92452.graph_c0",15,0.67,13,0.5,10,0.48,67,2.99,60,3.24,88,3.86,1.5e-08,2.090294681,"up","[N]","Cell motility ","Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K03424|4.4e-169|oeu:111370552|K03424 TatD DNase family protein [EC:3.1.21.-] | (RefSeq) uncharacterized protein LOC111370552 isoform X1","[L]","Replication, recombination and repair ","TatD related DNase","--","Putative deoxyribonuclease tatdn3 OS=Davidia involucrata OX=16924 GN=Din_027393 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111370552 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c114367.graph_c3",320,11.17,369,14.24,350,13.5,120,5.24,102,5.14,126,4.66,3.17e-38,-1.892138923,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K09422|1.3e-18|oeu:111401738|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB52-like","--","--","SPARK","--","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033642 PE=4 SV=1","T","Signal transduction mechanisms","nodulation receptor kinase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100305.graph_c0",2986,314.16,1040,103.12,951,102.66,601,64.56,330,40.64,409,43.69,0.0002809,-2.025870037,"down","[S]","Function unknown ","Cellular Component: extracellular region (GO:0005576);; ","K13449|1.7e-84|oeu:111384289|K13449 pathogenesis-related protein 1 | (RefSeq) basic form of pathogenesis-related protein 1-like","[S]","Function unknown ","Cysteine-rich secretory protein family","Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1","Pathogenesis-related protein 1 OS=Striga asiatica OX=4170 GN=STAS_12730 PE=4 SV=1","S","Function unknown","basic form of pathogenesis-related protein 1-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c103313.graph_c0",39,2.3,36,2,29,1.76,79,4.81,120,8.27,106,6.34,2.95e-05,1.212445386,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114093.graph_c0",94,2.62,112,2.76,95,2.51,47,1.62,54,1.93,63,1.8,1.06e-06,-1.17936546,"down","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: isoprenoid metabolic process (GO:0006720);; Biological Process: terpenoid metabolic process (GO:0006721);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: gibberellin metabolic process (GO:0009685);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Molecular Function: ent-copalyl diphosphate synthase activity (GO:0009905);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Molecular Function: terpene synthase activity (GO:0010333);; Biological Process: gibberellin mediated signaling pathway (GO:0010476);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: organic acid biosynthetic process (GO:0016053);; Biological Process: diterpenoid metabolic process (GO:0016101);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Molecular Function: isomerase activity (GO:0016853);; Molecular Function: intramolecular lyase activity (GO:0016872);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: signaling (GO:0023052);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: hormone biosynthetic process (GO:0042446);; Molecular Function: ion binding (GO:0043167);; Molecular Function: cation binding (GO:0043169);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to gibberellin stimulus (GO:0071370);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K04120|2.1e-14|pvu:PHAVU_001G152100g|K04120 ent-copalyl diphosphate synthase [EC:5.5.1.13] | (RefSeq) hypothetical protein","--","--","--","Ent-copalyl diphosphate synthase, chloroplastic OS=Salvia miltiorrhiza OX=226208 GN=CPS5 PE=1 SV=1","(+)-delta-cadinene synthase OS=Gossypium barbadense OX=3634 GN=ES319_D08G078200v1 PE=4 SV=1","S","Function unknown","hypothetical protein GOBAR_AA40271 [Gossypium barbadense]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007);; cellular component: organelle (GO:0043226)","Diterpenoid biosynthesis (ko00904)"]
["c85576.graph_c0",7705,815.25,8169,813.61,7156,776.58,3161,343.88,3335,416.34,3457,373.83,6.67e-159,-1.527652783,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: protein peptidyl-prolyl isomerization (GO:0000413);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Molecular Function: drug binding (GO:0008144);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: cellular process (GO:0009987);; Cellular Component: endomembrane system (GO:0012505);; Molecular Function: cyclosporin A binding (GO:0016018);; Cellular Component: membrane (GO:0016020);; Molecular Function: isomerase activity (GO:0016853);; Molecular Function: cis-trans isomerase activity (GO:0016859);; Biological Process: peptidyl-amino acid modification (GO:0018193);; Biological Process: peptidyl-proline modification (GO:0018208);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: signaling (GO:0023052);; Cellular Component: cell junction (GO:0030054);; Cellular Component: organelle membrane (GO:0031090);; Molecular Function: amide binding (GO:0033218);; Biological Process: protein modification process (GO:0036211);; Molecular Function: peptide binding (GO:0042277);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete vacuolar part (GO:0044437);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: apoplast (GO:0048046);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Cellular Component: symplast (GO:0055044);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: bounding membrane of organelle (GO:0098588);; Cellular Component: whole membrane (GO:0098805);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K01802|1.4e-94|sind:105169753|K01802 peptidylprolyl isomerase [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans isomerase 1","[O]","Posttranslational modification, protein turnover, chaperones ","Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1","Peptidyl-prolyl cis-trans isomerase OS=Olea europaea OX=4146 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","peptidyl-prolyl cis-trans isomerase 1 [Sesamum indicum]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: symplast (GO:0055044)","--"]
["c116854.graph_c1",19,1.65,28,2.29,27,2.41,7,0.62,9,0.92,15,1.33,0.003181758,-1.479626487,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c80874.graph_c0",0,0,0,0,0,0,29,1.64,88,5.71,53,2.99,3.58e-12,5.60118395,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","PLATZ transcription factor","--","B box-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_028802 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111387043 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c108079.graph_c0",2,0.11,3,0.16,2,0.12,25,1.44,25,1.65,41,2.35,2.43e-06,2.954409393,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110940.graph_c2",24,1.3,40,1.68,44,2.03,26,1.92,15,1.09,9,0.56,0.002788722,-1.353177892,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105024.graph_c2",164,10.91,149,10.2,142,12.87,65,7.5,37,4.61,72,8.76,3.31e-14,-1.696978111,"down","--","--","--","--","--","--","--","--","--","--","--","scarecrow-like protein 30 [Olea europaea var. sylvestris]","--","--"]
["c107659.graph_c0",19,1.36,8,0.72,17,0.83,71,7,80,8.67,63,5.83,5.42e-07,1.886202888,"up","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K08712|5.5e-59|gsl:Gasu_29800|K08712 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 | (RefSeq) ABC transporter, ATP-binding protein","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-2 type transporter;; ABC-2 type transporter","Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum OX=4097 GN=PDR1 PE=2 SV=1","Pleiotropic drug resistance protein OS=Striga asiatica OX=4170 GN=STAS_22050 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","pleiotropic drug resistance protein 1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","ABC transporters (ko02010)"]
["c94809.graph_c1",26,3.86,34,4.82,32,4.91,2,0.31,8,1.42,6,0.92,6.5e-07,-2.611073294,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: recognition of pollen (GO:0048544);; ","K01183|6.8e-26|nsy:104241083|K01183 chitinase [EC:3.2.1.14] | (RefSeq) chitinase-3-like protein 2","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1","Receptor-like serine/threonine-protein kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002204mg PE=3 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c97926.graph_c0",69,3.22,61,2.66,63,3.49,155,7.19,183,9.86,201,9.32,4.89e-08,1.14554878,"up","--","--","Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: transmembrane transport (GO:0055085);; ","K15377|1.5e-208|oeu:111402524|K15377 solute carrier family 44 (choline transporter-like protein), member 2/4/5 | (RefSeq) choline transporter protein 1 isoform X1","[I]","Lipid transport and metabolism ","Plasma-membrane choline transporter","Choline transporter protein 1 OS=Arabidopsis thaliana OX=3702 GN=CHER1 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002214mg PE=3 SV=1","I","Lipid transport and metabolism","choline transporter protein 1 isoform X3 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c101394.graph_c1",21,0.87,32,1.26,25,1.06,74,4.55,100,6.71,121,7.27,4.12e-07,1.556861957,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K13422|3.3e-11|ppp:112288376|K13422 transcription factor MYC2 | (RefSeq) transcription factor MYC3-like isoform X1","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17346 PE=4 SV=1","K","Transcription","transcription factor bHLH18-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c75236.graph_c0",40,6.88,35,7.95,53,13.54,11,2.7,12,3.22,12,3.31,5.01e-07,-2.094319421,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: protein catabolic process (GO:0030163);; ","K03061|2.3e-08|cic:CICLE_v10025681mg|K03061 26S proteasome regulatory subunit T1 | (RefSeq) hypothetical protein","[O]","Posttranslational modification, protein turnover, chaperones ","--","26S proteasome regulatory subunit 7A OS=Oryza sativa subsp. japonica OX=39947 GN=RPT1A PE=2 SV=1","26S protease regulatory subunit 7 OS=Striga asiatica OX=4170 GN=STAS_04139 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","26S protease regulatory subunit 7 [Striga asiatica]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Proteasome (ko03050)"]
["c115096.graph_c0",58,5.55,70,6.29,64,6.59,25,2.68,15,1.83,22,2.02,8.42e-09,-1.900151264,"down","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: transmembrane transport (GO:0055085);; Cellular Component: cell periphery (GO:0071944);; ","K14638|4.9e-47|cann:107843454|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.6-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 5.6 OS=Arabidopsis thaliana OX=3702 GN=NPF5.6 PE=2 SV=1","Protein NRT1/ PTR FAMILY 5.6 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc27755 PE=3 SV=1","E","Amino acid transport and metabolism","Protein NRT1/ PTR FAMILY 5.6 like [Actinidia chinensis var. chinensis]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c72811.graph_c0",30,4.22,45,5.94,37,5.33,164,23.66,185,30.56,174,24.99,2.52e-15,1.877871983,"up","--","--","Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: mitochondrial intermembrane space (GO:0005758);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: chaperone-mediated protein transport (GO:0072321);; ","K17781|3.0e-34|oeu:111371765|K17781 mitochondrial import inner membrane translocase subunit TIM13 | (RefSeq) mitochondrial import inner membrane translocase subunit Tim13-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Tim10/DDP family zinc finger","Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM13 PE=3 SV=2","Mitochondrial import inner membrane translocase subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28700 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import inner membrane translocase subunit Tim13-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c111676.graph_c0",507,22.77,484,20.8,469,21.49,221,12.31,193,13.87,203,11.94,1.69e-38,-1.559036772,"down","--","--","Molecular Function: cysteine-type peptidase activity (GO:0008234);; Molecular Function: ADP binding (GO:0043531);; ","--","--","--","--","--","Putative powdery mildew resistance protein, RPW8 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0104761 PE=3 SV=1","--","--","ubiquitin-like-specific protease 1A [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","--"]
["c102588.graph_c0",5,0.41,1,0.08,3,0.25,21,1.76,16,1.53,29,2.41,0.00071434,2.209997276,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99293.graph_c0",176,7.19,123,4.6,107,4.56,3081,120.46,2804,124.87,3258,126.82,1.82e-118,4.133141038,"up","[V]","Defense mechanisms ","Cellular Component: vacuolar membrane (GO:0005774);; Molecular Function: antiporter activity (GO:0015297);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K03327|5.3e-217|oeu:111406315|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 29-like","[R]","General function prediction only ","MatE","Protein DETOXIFICATION 31 OS=Arabidopsis thaliana OX=3702 GN=DTX31 PE=2 SV=1","Protein DETOXIFICATION OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004692mg PE=3 SV=1","V","Defense mechanisms","protein DETOXIFICATION 29-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c115287.graph_c1",336,36.58,365,35.22,328,36.09,1008,114.23,1157,150.34,1260,139.07,6.1e-43,1.410247362,"up","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: ribosomal small subunit assembly (GO:0000028);; Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: structural constituent of ribosome (GO:0003735);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: ribosome (GO:0005840);; Cellular Component: polysome (GO:0005844);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: rRNA processing (GO:0006364);; Biological Process: RNA processing (GO:0006396);; Biological Process: translation (GO:0006412);; Biological Process: peptide metabolic process (GO:0006518);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Cellular Component: small ribosomal subunit (GO:0015935);; Biological Process: cellular component organization (GO:0016043);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: rRNA metabolic process (GO:0016072);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: rRNA binding (GO:0019843);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: ribonucleoprotein complex assembly (GO:0022618);; Cellular Component: cytosolic ribosome (GO:0022626);; Cellular Component: cytosolic small ribosomal subunit (GO:0022627);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: cellular protein-containing complex assembly (GO:0034622);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: ribosome assembly (GO:0042255);; Biological Process: ribosomal small subunit biogenesis (GO:0042274);; Cellular Component: polysomal ribosome (GO:0042788);; Biological Process: peptide biosynthetic process (GO:0043043);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: cellular amide metabolic process (GO:0043603);; Biological Process: amide biosynthetic process (GO:0043604);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: ribosomal subunit (GO:0044391);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cytosolic part (GO:0044445);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Molecular Function: mRNA 5'-UTR binding (GO:0048027);; Biological Process: protein-containing complex assembly (GO:0065003);; Cellular Component: intracellular organelle lumen (GO:0070013);; Molecular Function: small ribosomal subunit rRNA binding (GO:0070181);; Biological Process: organelle assembly (GO:0070925);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: ribonucleoprotein complex subunit organization (GO:0071826);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; Cellular Component: ribonucleoprotein complex (GO:1990904);; ","K02955|3.2e-55|oeu:111412530|K02955 small subunit ribosomal protein S14e | (RefSeq) 40S ribosomal protein S14-3","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S11;; Ribosomal protein S11","40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2","Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb09t02120 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","hypothetical protein C4D60_Mb09t02120 [Musa balbisiana]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: macromolecular complex (GO:0032991)","Ribosome (ko03010)"]
["c97094.graph_c2",9,0.58,7,0.42,5,0.33,21,1.38,30,2.26,28,1.83,0.00659759,1.471321666,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K17085|4.3e-31|oeu:111373148|K17085 transmembrane 9 superfamily member 1 | (RefSeq) transmembrane 9 superfamily member 5","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana OX=3702 GN=TMN2 PE=2 SV=1","Transmembrane 9 superfamily member OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01854 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","transmembrane 9 superfamily member 5 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c114123.graph_c0",393,8.47,420,8.7,393,9.15,1049,24.93,940,26.08,1186,28.61,2.34e-32,1.068063206,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K11498|3.7e-169|oeu:111410085|K11498 centromeric protein E | (RefSeq) kinesin-like protein KIN-7D, mitochondrial isoform X1","[Z]","Cytoskeleton ","Zinc finger, C3HC4 type (RING finger)","Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KIN7D PE=2 SV=1","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22576 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-7D, mitochondrial isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c112632.graph_c1",17,0.36,18,0.36,15,0.33,62,1.34,71,1.76,77,1.66,1.1e-06,1.693077458,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: cell morphogenesis (GO:0000902);; Biological Process: response to acid chemical (GO:0001101);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: response to stress (GO:0006950);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: phototransduction (GO:0007602);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: biological_process (GO:0008150);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of abiotic stimulus (GO:0009582);; Biological Process: detection of light stimulus (GO:0009583);; Biological Process: red, far-red light phototransduction (GO:0009585);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: photoperiodism (GO:0009648);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: cellular process (GO:0009987);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: circumnutation (GO:0010031);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Biological Process: signaling (GO:0023052);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: response to lipid (GO:0033993);; Biological Process: growth (GO:0040007);; Biological Process: response to chemical (GO:0042221);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: rhythmic process (GO:0048511);; Biological Process: photoperiodism, flowering (GO:0048573);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: developmental growth (GO:0048589);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: multicellular organismal movement (GO:0050879);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of multicellular organismal process (GO:0051239);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to abiotic stimulus (GO:0071214);; Biological Process: cellular response to radiation (GO:0071478);; Biological Process: cellular response to light stimulus (GO:0071482);; Biological Process: cellular response to red or far red light (GO:0071489);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: response to alcohol (GO:0097305);; Biological Process: cellular response to environmental stimulus (GO:0104004);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of multicellular organismal development (GO:2000026);; Biological Process: regulation of photoperiodism, flowering (GO:2000028);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of reproductive process (GO:2000241);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K12125|6.3e-146|oeu:111376119|K12125 protein EARLY FLOWERING 3 | (RefSeq) protein EARLY FLOWERING 3-like isoform X1","--","--","--","Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana OX=3702 GN=ELF3 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00026970001 PE=4 SV=1","S","Function unknown","protein EARLY FLOWERING 3-like isoform X2 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: signaling (GO:0023052);; biological process: multicellular organismal process (GO:0032501);; biological process: rhythmic process (GO:0048511);; biological process: growth (GO:0040007)","Circadian rhythm - plant (ko04712)"]
["c106982.graph_c0",40,1.37,48,1.56,41,1.45,0,0,1,0.04,0,0,1.2e-13,-5.428211549,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","--","--","--","--","--","uncharacterized protein LOC109004931 OS=Juglans regia OX=51240 GN=LOC109004931 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111387334 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c116644.graph_c0",553,16.43,609,15.59,553,14.52,191,4.64,189,5.09,210,4.99,1.67e-59,-1.85511297,"down","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: xylan 1,4-beta-xylosidase activity (GO:0009044);; ","K15920|1.1e-175|atr:18422386|K15920 xylan 1,4-beta-xylosidase [EC:3.2.1.37] | (RefSeq) beta-D-xylosidase 4","--","--","Glycosyl hydrolase family 3 C-terminal domain;; Glycosyl hydrolase family 3 N terminal domain;; Fibronectin type III-like domain;; Glycosyl hydrolase family 3 N terminal domain","Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1","Putative beta-D-xylosidase OS=Davidia involucrata OX=16924 GN=Din_025697 PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-D-xylosidase 1-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c107768.graph_c0",115,2.68,130,2.87,104,2.48,55,1.31,38,1.06,68,1.63,2.29e-09,-1.423699582,"down","--","--","--","--","--","--","Proline-rich nuclear receptor coactivator motif","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18405 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111406639 [Olea europaea var. sylvestris]","--","--"]
["c115548.graph_c0",132,3.97,136,3.65,129,4.26,2012,47.11,1996,54.31,2100,48.87,1.04e-274,3.612267379,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: pectin catabolic process (GO:0045490);; Molecular Function: metal ion binding (GO:0046872);; ","K01728|9.4e-231|oeu:111367050|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 18 isoform X1","--","--","Pectate lyase","Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1","Pectate lyase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13900 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable pectate lyase 18 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Pentose and glucuronate interconversions (ko00040)"]
["c102611.graph_c0",61,2.45,84,3.2,61,2.53,224,9.21,206,9.75,231,9.45,2.28e-12,1.348555758,"up","--","--","Biological Process: response to red or far red light (GO:0009639);; Biological Process: negative gravitropism (GO:0009959);; ","--","--","--","Plant protein of unknown function (DUF641)","Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana OX=3702 GN=GIL1 PE=1 SV=1","DUF641 domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_03170 PE=4 SV=1","S","Function unknown","protein GRAVITROPIC IN THE LIGHT 1 isoform X1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c94631.graph_c0",71,8.05,60,8.33,59,4.74,17,1.75,32,5.81,38,5.03,2.15e-05,-1.407854734,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109101.graph_c0",59,2.85,60,2.89,87,4.9,172,7.08,157,7.39,239,9.8,8.36e-07,1.110043827,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c95071.graph_c0",629,21.57,691,22.54,603,21.35,141,5.18,112,5.24,129,6.46,2.46e-103,-2.643293212,"down","--","--","Molecular Function: calmodulin binding (GO:0005516);; Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Cellular Component: integral component of membrane (GO:0016021);; ","K08472|9.1e-263|oeu:111393561|K08472 mlo protein | (RefSeq) MLO-like protein 1","--","--","Mlo family","MLO-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=MLO1 PE=1 SV=1","MLO-like protein OS=Erythranthe guttata OX=4155 GN=MLO PE=3 SV=1","G","Carbohydrate transport and metabolism","MLO-like protein 1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103047.graph_c1",1914,50.68,1831,47.85,1791,50.88,624,17.75,536,17.78,632,19.69,3.47e-153,-1.949376275,"down","--","--","Molecular Function: ferric-chelate reductase activity (GO:0000293);; Cellular Component: integral component of membrane (GO:0016021);; ","K00521|2.7e-309|sind:105169029|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic","[PQ]","--","Ferric reductase like transmembrane component;; FAD-binding domain;; Ferric reductase NAD binding domain","Ferric reduction oxidase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FRO7 PE=2 SV=1","Ferric reductase, NADH/NADPH oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05043 PE=4 SV=1","--","--","ferric reduction oxidase 7, chloroplastic [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106679.graph_c0",0,0,2,0.18,2,0.2,36,3.61,34,3.91,31,3.09,4.55e-08,3.665934099,"up","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_257910 PE=4 SV=1","--","--","hypothetical protein CUMW_257910, partial [Citrus unshiu]","--","--"]
["c106095.graph_c2",3785,216.27,4499,243.68,3639,215.97,1174,74.53,1067,77.07,1207,76.09,5.54e-228,-2.10781414,"down","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: drug binding (GO:0008144);; Cellular Component: membrane (GO:0016020);; Molecular Function: AMP binding (GO:0016208);; Molecular Function: purine nucleotide binding (GO:0017076);; Molecular Function: adenyl nucleotide binding (GO:0030554);; Molecular Function: ribonucleotide binding (GO:0032553);; Molecular Function: purine ribonucleotide binding (GO:0032555);; Molecular Function: adenyl ribonucleotide binding (GO:0032559);; Molecular Function: small molecule binding (GO:0036094);; Molecular Function: ion binding (GO:0043167);; Molecular Function: anion binding (GO:0043168);; Molecular Function: cation binding (GO:0043169);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: cell periphery (GO:0071944);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: carbohydrate derivative binding (GO:0097367);; Molecular Function: nucleoside phosphate binding (GO:1901265);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","Phosphotyrosine interaction domain (PTB/PID);; Phosphotyrosine-binding domain","--","Universal stress protein 8 OS=Salvia miltiorrhiza OX=226208 PE=2 SV=1","T","Signal transduction mechanisms","universal stress protein PHOS34-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","--"]
["c97981.graph_c1",25,1.52,23,1.32,28,1.75,1,0.06,1,0.07,2,0.12,1.04e-08,-3.855976114,"down","--","--","--","K01873|2.0e-07|nau:109209380|K01873 valyl-tRNA synthetase [EC:6.1.1.9] | (RefSeq) valine--tRNA ligase, mitochondrial 1-like","--","--","--","--","Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00010 PE=4 SV=1","L","Replication, recombination and repair","pol polyprotein [Cucumis melo var. makuwa]","--","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c111412.graph_c4",144,6.62,131,5.01,131,5.39,379,12.63,379,14.78,454,15.02,1.82e-18,1.245966171,"up","[J]","Translation, ribosomal structure and biogenesis ","--","K14565|3.7e-156|oeu:111403302|K14565 nucleolar protein 58 | (RefSeq) probable nucleolar protein 5-2","[AJ]","--","snoRNA binding domain, fibrillarin;; NOP5NT (NUC127) domain","Probable nucleolar protein 5-2 OS=Arabidopsis thaliana OX=3702 GN=NOP5-2 PE=1 SV=1","Nucleolar protein like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07860 PE=3 SV=1","--","--","probable nucleolar protein 5-2 [Olea europaea var. sylvestris]","--","Ribosome biogenesis in eukaryotes (ko03008)"]
["c108331.graph_c0",2807,50.78,2758,48.96,2646,48.67,1601,30.44,1508,33.02,1687,33.68,6.06e-78,-1.097986461,"down","--","--","Cellular Component: exocyst (GO:0000145);; Biological Process: exocytosis (GO:0006887);; Biological Process: Golgi to plasma membrane transport (GO:0006893);; Biological Process: protein transport (GO:0015031);; ","K17637|0.0e+00|oeu:111376149|K17637 exocyst complex component 2 | (RefSeq) exocyst complex component SEC5A-like isoform X1","[U]","Intracellular trafficking, secretion, and vesicular transport ","Exocyst complex component Sec5","Exocyst complex component SEC5A OS=Arabidopsis thaliana OX=3702 GN=SEC5A PE=1 SV=1","Exocyst complex component SEC5 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27673 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","Sec5 subunit of exocyst complex [Handroanthus impetiginosus]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c110625.graph_c1",1,0.03,6,0.15,7,0.19,30,0.82,23,0.72,36,0.98,0.000233263,2.111912681,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115995.graph_c0",165,4.6,138,3.26,161,4.22,12,0.28,17,1.14,27,1.4,1.49e-32,-3.307492668,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117139.graph_c0",8,0.15,17,0.28,9,0.18,44,0.85,55,1.31,51,1,3.93e-05,1.741597458,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13416|2.5e-51|ccaj:109804867|K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Chromo (CHRromatin Organisation MOdifier) domain","Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28230 PE=3 SV=1","T","Signal transduction mechanisms","rust resistance kinase Lr10-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c105318.graph_c3",17161,829.14,17037,798.43,16110,801.37,7634,368.56,5921,338.01,6974,337.01,1.49e-166,-1.616890042,"down","[C]","Energy production and conversion ","Molecular Function: phenylacetaldehyde dehydrogenase activity (GO:0008957);; ","K00128|6.1e-132|sind:105168246|K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) aldehyde dehydrogenase family 2 member B7, mitochondrial","[C]","Energy production and conversion ","Aldehyde dehydrogenase family","Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ALDH2B7 PE=1 SV=2","Aldehyde dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29976 PE=3 SV=1","C","Energy production and conversion","Aldehyde dehydrogenase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Glycolysis / Gluconeogenesis (ko00010);; Ascorbate and aldarate metabolism (ko00053);; Fatty acid degradation (ko00071);; Valine, leucine and isoleucine degradation (ko00280);; Lysine degradation (ko00310);; Arginine and proline metabolism (ko00330);; Histidine metabolism (ko00340);; Tryptophan metabolism (ko00380);; beta-Alanine metabolism (ko00410);; Glycerolipid metabolism (ko00561);; Pyruvate metabolism (ko00620);; Pantothenate and CoA biosynthesis (ko00770);; Limonene and pinene degradation (ko00903)"]
["c108980.graph_c0",1161,28.46,1230,27.6,1040,25.42,546,13.22,519,14.39,633,15.26,1.93e-59,-1.335298395,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: microtubule bundle formation (GO:0001578);; Biological Process: liver development (GO:0001889);; Biological Process: heart looping (GO:0001947);; Biological Process: morphogenesis of an epithelium (GO:0002009);; Biological Process: regionalization (GO:0003002);; Biological Process: heart morphogenesis (GO:0003007);; Biological Process: embryonic heart tube morphogenesis (GO:0003143);; Biological Process: cilium movement (GO:0003341);; Biological Process: regulation of cilium movement (GO:0003352);; Biological Process: regulation of cilium beat frequency (GO:0003356);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cytoskeleton (GO:0005856);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cilium (GO:0005929);; Cellular Component: axoneme (GO:0005930);; Biological Process: movement of cell or subcellular component (GO:0006928);; Biological Process: organelle organization (GO:0006996);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: microtubule-based process (GO:0007017);; Biological Process: microtubule-based movement (GO:0007018);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: determination of left/right symmetry (GO:0007368);; Biological Process: pattern specification process (GO:0007389);; Biological Process: heart development (GO:0007507);; Biological Process: biological_process (GO:0008150);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: embryo development (GO:0009790);; Biological Process: specification of symmetry (GO:0009799);; Biological Process: determination of bilateral symmetry (GO:0009855);; Biological Process: animal organ morphogenesis (GO:0009887);; Biological Process: tissue development (GO:0009888);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: nuclear body (GO:0016604);; Cellular Component: nuclear speck (GO:0016607);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: cell projection organization (GO:0030030);; Biological Process: cell projection assembly (GO:0030031);; Biological Process: respiratory tube development (GO:0030323);; Biological Process: lung development (GO:0030324);; Biological Process: pancreas development (GO:0031016);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Cellular Component: plasma membrane bounded cell projection cytoplasm (GO:0032838);; Biological Process: regulation of localization (GO:0032879);; Biological Process: regulation of microtubule-based process (GO:0032886);; Biological Process: cellular protein-containing complex assembly (GO:0034622);; Biological Process: embryonic heart tube development (GO:0035050);; Biological Process: axoneme assembly (GO:0035082);; Biological Process: tube morphogenesis (GO:0035239);; Biological Process: tube development (GO:0035295);; Biological Process: determination of pancreatic left/right asymmetry (GO:0035469);; Biological Process: outer dynein arm assembly (GO:0036158);; Biological Process: inner dynein arm assembly (GO:0036159);; Cellular Component: cell projection (GO:0042995);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoskeletal part (GO:0044430);; Cellular Component: obsolete ciliary part (GO:0044441);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete nucleoplasm part (GO:0044451);; Biological Process: motile cilium assembly (GO:0044458);; Cellular Component: obsolete cell projection part (GO:0044463);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: cilium organization (GO:0044782);; Molecular Function: protein-containing complex binding (GO:0044877);; Biological Process: animal organ development (GO:0048513);; Biological Process: embryonic organ morphogenesis (GO:0048562);; Biological Process: digestive tract development (GO:0048565);; Biological Process: embryonic organ development (GO:0048568);; Biological Process: embryonic morphogenesis (GO:0048598);; Biological Process: tissue morphogenesis (GO:0048729);; Biological Process: system development (GO:0048731);; Biological Process: gland development (GO:0048732);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of cellular component movement (GO:0051270);; Biological Process: digestive system development (GO:0055123);; Biological Process: cilium assembly (GO:0060271);; Biological Process: epithelium development (GO:0060429);; Biological Process: respiratory system development (GO:0060541);; Biological Process: epithelial tube morphogenesis (GO:0060562);; Biological Process: regulation of microtubule-based movement (GO:0060632);; Biological Process: left/right pattern formation (GO:0060972);; Biological Process: hepaticobiliary system development (GO:0061008);; Biological Process: determination of heart left/right asymmetry (GO:0061371);; Biological Process: protein-containing complex assembly (GO:0065003);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: axonemal dynein complex assembly (GO:0070286);; Molecular Function: dynein complex binding (GO:0070840);; Biological Process: organelle assembly (GO:0070925);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: determination of digestive tract left/right asymmetry (GO:0071907);; Biological Process: determination of liver left/right asymmetry (GO:0071910);; Cellular Component: cell periphery (GO:0071944);; Biological Process: circulatory system development (GO:0072359);; Cellular Component: ciliary plasm (GO:0097014);; Cellular Component: cytoplasmic region (GO:0099568);; Cellular Component: plasma membrane bounded cell projection (GO:0120025);; Biological Process: plasma membrane bounded cell projection assembly (GO:0120031);; Biological Process: plasma membrane bounded cell projection organization (GO:0120036);; Cellular Component: obsolete plasma membrane bounded cell projection part (GO:0120038);; ","--","[T]","Signal transduction mechanisms ","Leucine Rich repeats (2 copies);; Leucine rich repeat;; Leucine-rich repeat;; Leucine Rich Repeat","--","U2-associated snRNP A' protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16956 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111408848 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020)","--"]
["c105481.graph_c0",2,0.07,4,0.13,5,0.18,16,0.57,22,0.91,20,0.72,0.004641565,1.829445728,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c85216.graph_c0",0,0,1,0.05,0,0,76,4.51,138,9.37,133,7.84,9.95e-19,6.156423749,"up","[I]","Lipid transport and metabolism ","Molecular Function: methyl indole-3-acetate esterase activity (GO:0080030);; ","K14493|1.9e-45|smo:SELMODRAFT_450797|K14493 gibberellin receptor GID1 [EC:3.-.-.-] | (RefSeq) GID1b-1; hypothetical protein","[V]","Defense mechanisms ","alpha/beta hydrolase fold;; Carboxylesterase family;; Steryl acetyl hydrolase","Probable carboxylesterase 15 OS=Arabidopsis thaliana OX=3702 GN=CXE15 PE=2 SV=1","Arylacetamide deacetylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01931 PE=4 SV=1","V","Defense mechanisms","probable carboxylesterase 15 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Plant hormone signal transduction (ko04075)"]
["c99150.graph_c0",2765,145.21,3074,152.39,2837,153.04,1385,73.96,1088,66.72,1374,73.29,1.56e-108,-1.497679855,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: generation of precursor metabolites and energy (GO:0006091);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid stroma (GO:0009532);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: photosynthetic electron transport chain (GO:0009767);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: cellular process (GO:0009987);; Biological Process: photosynthesis (GO:0015979);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: photosynthesis, light reaction (GO:0019684);; Biological Process: electron transport chain (GO:0022900);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Cellular Component: plastid thylakoid (GO:0031976);; Cellular Component: organelle subcompartment (GO:0031984);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: tetrapyrrole metabolic process (GO:0033013);; Biological Process: tetrapyrrole biosynthetic process (GO:0033014);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: protein-membrane adaptor activity (GO:0043495);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: obsolete regulation of cofactor metabolic process (GO:0051193);; Biological Process: obsolete positive regulation of cofactor metabolic process (GO:0051194);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of heme biosynthetic process (GO:0070453);; Biological Process: positive regulation of heme biosynthetic process (GO:0070455);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: regulation of tetrapyrrole metabolic process (GO:1901401);; Biological Process: positive regulation of tetrapyrrole metabolic process (GO:1901403);; Biological Process: regulation of tetrapyrrole biosynthetic process (GO:1901463);; Biological Process: positive regulation of tetrapyrrole biosynthetic process (GO:1901465);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","--","--","--","Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLUTRBP PE=1 SV=1","DUF2470 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_039011 PE=4 SV=1","S","Function unknown","glutamyl-tRNA reductase-binding protein, chloroplastic [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007)","--"]
["c102980.graph_c1",6200,285.01,6939,299.24,6183,289.66,2907,136.08,2642,145.94,2913,136.06,2.36e-187,-1.511739855,"down","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978);; Biological Process: galactose metabolic process (GO:0006012);; ","K01784|1.6e-135|oeu:111382371|K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] | (RefSeq) bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like","[M]","Cell wall/membrane/envelope biogenesis ","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; Polysaccharide biosynthesis protein;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; RmlD substrate binding domain;; Male sterility protein;; GDP-mannose 4,6 dehydratase","Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=UGE1 PE=1 SV=2","UDP-glucose 4-epimerase OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS5018 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Galactose metabolism (ko00052);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c109171.graph_c0",1425,76.14,1390,70.31,1377,88.13,727,48.1,648,44.93,743,37.17,1.05e-67,-1.307538375,"down","--","--","--","--","--","--","C2 domain","--","C2 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29243 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111368814 [Olea europaea var. sylvestris]","--","--"]
["c105220.graph_c0",86,4.07,94,3.72,68,3.04,280,5.42,252,5.77,265,5.02,1.43e-14,1.354439729,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K01768|0.0e+00|ghi:107911085|K01768 adenylate cyclase [EC:4.6.1.1] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107911085","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; gag-polypeptide of LTR copia-type;; Integrase core domain;; GAG-pre-integrase domain;; Domain of unknown function (DUF4219)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Putative RNA-directed DNA polymerase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0101191 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","putative RNA-directed DNA polymerase [Medicago truncatula]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Purine metabolism (ko00230)"]
["c96205.graph_c0",30,2.09,30,1.97,28,2,3,0.21,2,0.16,0,0,1.63e-09,-3.844357584,"down","[H]","Coenzyme transport and metabolism ","Molecular Function: alternative oxidase activity (GO:0009916);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion binding (GO:0046872);; Cellular Component: respirasome (GO:0070469);; Molecular Function: ubiquinol:oxygen oxidoreductase activity (GO:0102721);; ","K17893|1.7e-162|oeu:111398599|K17893 ubiquinol oxidase [EC:1.10.3.11] | (RefSeq) ubiquinol oxidase 2, mitochondrial-like isoform X1","--","--","Alternative oxidase","Ubiquinol oxidase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=AOX3 PE=1 SV=2","Ubiquinol oxidase OS=Olea europaea OX=4146 GN=AOX1b PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ubiquinol oxidase 2, mitochondrial-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c89640.graph_c0",1302,73.06,1484,78.69,1370,79.13,400,22.96,335,22.03,420,24.03,2.37e-141,-2.168202657,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleosome assembly (GO:0006334);; Cellular Component: host cell nucleus (GO:0042025);; ","K11275|4.7e-47|oeu:111365389|K11275 histone H1/5 | (RefSeq) histone H1-like","--","--","linker histone H1 and H5 family","Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1","H15 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_04946 PE=3 SV=1","B","Chromatin structure and dynamics","histone H1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c117012.graph_c0",498,11.96,483,10.89,446,11.16,1306,34.17,1042,31.24,1342,34.87,9.39e-32,1.041624386,"up","[M]","Cell wall/membrane/envelope biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: UDP-glucuronate decarboxylase activity (GO:0048040);; ","K08678|9.6e-139|sind:105171535|K08678 UDP-glucuronate decarboxylase [EC:4.1.1.35] | (RefSeq) UDP-glucuronic acid decarboxylase 2","[GM]","--","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family","UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1","dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24837 PE=4 SV=1","--","--","UDP-glucuronic acid decarboxylase 2 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c101371.graph_c1",166,9.52,163,7.68,147,8.46,23,1.42,35,2.34,33,1.72,1.48e-28,-2.662622452,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[T]","Signal transduction mechanisms ","--","--","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11168 PE=4 SV=1","T","Signal transduction mechanisms","Serine/threonine protein kinase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116258.graph_c0",95,1.05,92,0.96,80,0.94,243,2.91,258,3.48,310,3.56,2.73e-13,1.269214289,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Biological Process: protein phosphorylation (GO:0006468);; ","K00924|1.7e-298|oeu:111398674|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor-like protein kinase HSL1","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat;; PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E23 PE=3 SV=2","Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1","T","Signal transduction mechanisms","pentatricopeptide repeat-containing protein At2g34400 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c102256.graph_c0",75,2.27,132,3.76,130,4.03,43,1.32,52,1.83,74,2.26,1.97e-06,-1.299366843,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_045516 PE=4 SV=1","--","--","uncharacterized protein LOC111401899 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108248.graph_c0",17,1.13,16,1.01,16,1.1,47,3.2,51,3.98,72,4.88,0.000174997,1.410364764,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24829 PE=4 SV=1","--","--","uncharacterized protein LOC111396926 [Olea europaea var. sylvestris]","--","--"]
["c111637.graph_c0",326,6.03,291,5.11,267,5.1,109,2.06,95,3.24,126,3.38,1.53e-28,-1.735541044,"down","--","--","Molecular Function: G protein-coupled receptor binding (GO:0001664);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: signaling receptor binding (GO:0005102);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: dopamine receptor binding (GO:0050780);; ","--","[O]","Posttranslational modification, protein turnover, chaperones ","--","--","J domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16499 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111378997 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c113730.graph_c0",359,16.3,410,17.06,370,17.07,1267,58.61,1075,55.58,1196,54.08,1.66e-46,1.309590131,"up","[H]","Coenzyme transport and metabolism ","Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: lipoate biosynthetic process (GO:0009107);; Biological Process: protein lipoylation (GO:0009249);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: lipoate synthase activity (GO:0016992);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; Molecular Function: lipoyl synthase activity (acting on glycine-cleavage complex H protein (GO:0102552);; Molecular Function: lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein) (GO:0102553);; ","K03644|6.2e-166|sind:105156140|K03644 lipoyl synthase [EC:2.8.1.8] | (RefSeq) lipoyl synthase, chloroplastic","[H]","Coenzyme transport and metabolism ","Radical SAM superfamily;; N-terminal domain of lipoyl synthase of Radical_SAM family","Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1","Lipoyl synthase, chloroplastic OS=Erythranthe guttata OX=4155 GN=LIP1P PE=3 SV=1","H","Coenzyme transport and metabolism","PREDICTED: lipoyl synthase, chloroplastic [Erythranthe guttata]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Lipoic acid metabolism (ko00785)"]
["c113580.graph_c1",230,34.2,262,35.69,231,35.55,92,8.28,114,12.08,126,11.79,1.78e-17,-1.432801949,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K09422|2.5e-15|adu:107480624|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB102","[K]","Transcription ","--","Transcription factor MYB74 OS=Arabidopsis thaliana OX=3702 GN=MYB74 PE=2 SV=1","Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g011715 PE=4 SV=1","--","--","hypothetical protein Ahy_A03g011715 [Arachis hypogaea]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c102651.graph_c3",4,0.29,1,0.07,0,0,25,1.87,24,2.06,34,2.53,3.15e-06,3.161584618,"up","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: ATP binding (GO:0005524);; Biological Process: phospholipid transport (GO:0015914);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase-coupled intramembrane lipid transporter activity (GO:0140326);; ","K01530|4.4e-96|oeu:111397871|K01530 phospholipid-translocating ATPase [EC:7.6.2.1] | (RefSeq) probable phospholipid-transporting ATPase 8","[R]","General function prediction only ","Phospholipid-translocating ATPase N-terminal","Probable phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana OX=3702 GN=ALA8 PE=3 SV=1","Phospholipid-transporting ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18348 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable phospholipid-transporting ATPase 8 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c113963.graph_c0",7,0.49,7,0.32,7,0.43,424,53.85,496,71.24,481,60.13,1.51e-66,5.562652735,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Molecular Function: ATPase activity (GO:0016887);; ","K12608|2.4e-23|oeu:111409991|K12608 CCR4-NOT complex subunit CAF16 | (RefSeq) ABC transporter I family member 20","[RK]","--","--","ABC transporter I family member 20 OS=Arabidopsis thaliana OX=3702 GN=ABCI20 PE=2 SV=1","ABC transporter I family member 20 OS=Capsicum baccatum OX=33114 GN=CQW23_34015 PE=4 SV=1","K","Transcription","ABC transporter I family member 20 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","RNA degradation (ko03018)"]
["c105498.graph_c0",78,2.32,75,1.86,72,2.18,233,7.04,201,6.54,270,8.69,1.18e-12,1.305827397,"up","--","--","Biological Process: fucose metabolic process (GO:0006004);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K23280|5.9e-80|zma:103634607|K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) uncharacterized protein LOC103634607","--","--","GDP-fucose protein O-fucosyltransferase","O-fucosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=OFUT7 PE=2 SV=1","O-fucosyltransferase family protein OS=Davidia involucrata OX=16924 GN=Din_037598 PE=3 SV=1","G","Carbohydrate transport and metabolism","O-fucosyltransferase 7 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c85245.graph_c0",0,0,0,0,0,0,54,7.37,79,12.36,66,8.95,8.64e-14,5.860427726,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","Transcription factor bHLH25 OS=Arabidopsis thaliana OX=3702 GN=BHLH25 PE=2 SV=2","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00008657001 PE=4 SV=1","K","Transcription","transcription factor bHLH18-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c100914.graph_c1",35,2.15,39,2.26,25,1.58,7,0.44,9,0.65,4,0.25,8.45e-07,-2.430149338,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K12447|4.0e-72|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37929 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c95418.graph_c0",25,2.99,22,2.48,27,3.42,0,0,1,0.14,1,0.12,4.14e-09,-4.330268973,"down","--","--","--","K06630|3.3e-50|ini:109169617|K06630 14-3-3 protein epsilon | (RefSeq) 14-3-3 protein 9","[O]","Posttranslational modification, protein turnover, chaperones ","14-3-3 protein","14-3-3-like protein D OS=Glycine max OX=3847 GN=GF14D PE=2 SV=1","14-3-3 protein zeta OS=Anthurium amnicola OX=1678845 GN=14-3-3zeta PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","14-3-3 protein zeta [Rhodamnia argentea]","--","--"]
["c106668.graph_c1",5355,209.79,5356,200.05,5076,205.5,1369,87.69,1246,94.83,1490,91.99,0,-2.26626109,"down","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20617|3.0e-83|ini:109177006|K20617 cytochrome P450 family 71 subfamily A | (RefSeq) cytochrome P450 71A3-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450;; Cytochrome P450","Cytochrome P450 736A117 OS=Prunus mume OX=102107 GN=CYP736A117 PE=2 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_023390 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 71A6-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c79334.graph_c0",23,1.42,3,0.18,11,0.7,73,4.61,111,8.03,93,5.84,0.000561212,2.258797344,"up","[K]","Transcription ","Molecular Function: O-methyltransferase activity (GO:0008171);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: methylation (GO:0032259);; Molecular Function: protein dimerization activity (GO:0046983);; ","K16040|1.1e-188|oeu:111392924|K16040 trans-resveratrol di-O-methyltransferase [EC:2.1.1.240] | (RefSeq) trans-resveratrol di-O-methyltransferase-like","[R]","General function prediction only ","O-methyltransferase domain;; Dimerisation domain","Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera OX=29760 GN=ROMT PE=1 SV=2","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g02840 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","trans-resveratrol di-O-methyltransferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)"]
["c65566.graph_c1",4,1.87,0,0,2,0.94,19,9.09,18,9.94,21,9.92,0.000479197,2.47476182,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: GDP-mannose 3,5-epimerase activity (GO:0047918);; Molecular Function: NAD binding (GO:0051287);; ","K10046|2.1e-60|crb:17883756|K10046 GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-] | (RefSeq) GDP-mannose 3,5-epimerase","[GM]","--","NAD dependent epimerase/dehydratase family;; GDP-mannose 4,6 dehydratase","GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana OX=3702 GN=At5g28840 PE=1 SV=1","GDP-D-mannose 3',5'-epimerase OS=Striga asiatica OX=4170 GN=STAS_18311 PE=4 SV=1","--","--","GDP-mannose 3,5-epimerase 2 [Ipomoea triloba]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c97262.graph_c0",10,0.4,3,0.11,5,0.21,19,0.79,30,1.42,39,1.6,0.001483893,1.78737049,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","--","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04176 PE=4 SV=1","--","--","transcription factor EMB1444-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c103696.graph_c0",39,1.2,32,0.94,28,0.9,2,0.07,8,0.3,3,0.1,3.81e-08,-2.955561221,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","--","--","--","--","--","uncharacterized protein LOC108994001 OS=Juglans regia OX=51240 GN=LOC108994001 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111371184 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c95914.graph_c0",36,2.64,37,2.63,37,4.09,186,13.67,232,19.54,243,19,3.83e-23,2.23488313,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleosome assembly (GO:0006334);; Cellular Component: host cell nucleus (GO:0042025);; ","--","--","--","linker histone H1 and H5 family;; AT hook motif","HMG-Y-related protein A OS=Glycine max OX=3847 PE=2 SV=1","HMG-Y-related protein A-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_06405 PE=4 SV=1","K","Transcription","HMG-Y-related protein B-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c111188.graph_c0",72,2.14,102,3.34,92,2.16,352,11,323,11.25,401,14.12,9.43e-25,1.678520151,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: damaged DNA binding (GO:0003684);; Molecular Function: ATP binding (GO:0005524);; Biological Process: DNA repair (GO:0006281);; Molecular Function: DNA-dependent ATPase activity (GO:0008094);; ","K04485|1.4e-146|sind:105157702|K04485 DNA repair protein RadA/Sms | (RefSeq) uncharacterized protein LOC105157702 isoform X1","--","--","AAA domain;; KaiC;; DnaB-like helicase C terminal domain;; Rubredoxin metal binding domain;; ATPase family associated with various cellular activities (AAA);; Subunit ChlI of Mg-chelatase;; Lon protease (S16) C-terminal proteolytic domain","--","Endopeptidase La OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10242 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC105157702 isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)","--"]
["c99769.graph_c0",5,1.09,2,0.41,4,0.89,23,5.14,23,5.89,23,5.09,0.000767145,2.068597439,"up","--","--","Biological Process: regulation of cyclin-dependent protein serine/threonine kinase activity (GO:0000079);; Molecular Function: protein kinase binding (GO:0019901);; ","K01255|4.7e-24|mng:MNEG_4524|K01255 leucyl aminopeptidase [EC:3.4.11.1] | (RefSeq) leucyl aminopeptidase","[R]","General function prediction only ","Cyclin;; Cyclin, N-terminal domain","Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1","Cyclin OS=Nyssa sinensis OX=561372 GN=F0562_014680 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","cyclin-U4-1-like isoform X1 [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","Glutathione metabolism (ko00480)"]
["c98966.graph_c1",2,0.08,7,0.26,4,0.16,23,0.92,30,1.38,28,1.12,0.000325878,2.099060342,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.4e-222|ccav:112518663|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.2-like","[E]","Amino acid transport and metabolism ","POT family;; Major Facilitator Superfamily","Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042481 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 5.2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c85952.graph_c2",8,1.74,18,2.08,10,1.16,70,9.36,58,8.85,90,11.88,1.14e-08,2.179875997,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; ","K24345|5.0e-58|oeu:111396475|K24345 calcium-binding protein KIC and related proteins | (RefSeq) calcium-binding protein PBP1-like","[ZD]","--","EF-hand domain pair","Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1","EF-hand domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25848 PE=4 SV=1","--","--","calcium-binding protein PBP1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c112059.graph_c0",123,10.15,128,12.07,117,11.11,311,29.63,326,32.92,321,29.85,8.01e-12,1.054752639,"up","--","--","--","--","--","--","--","--","RING-type domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21995 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111384658 [Olea europaea var. sylvestris]","--","--"]
["c68639.graph_c0",43,9.5,60,12.39,40,9.18,151,34.21,141,36.69,156,35.01,1.39e-08,1.310038491,"up","--","--","Molecular Function: ubiquitin protein ligase activity (GO:0061630);; ","K11982|2.3e-71|oeu:111410422|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) uncharacterized protein LOC111410422","[O]","Posttranslational modification, protein turnover, chaperones ","zinc-ribbon","--","RING-type E3 ubiquitin transferase OS=Salvia splendens OX=180675 GN=RNF115_126 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111410422 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c106747.graph_c0",5719,177.2,6057,173.93,5808,180.27,2260,70.67,1853,67.25,2208,69.48,1.9e-220,-1.799997014,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: tRNA binding (GO:0000049);; Molecular Function: glutamate-tRNA ligase activity (GO:0004818);; Molecular Function: ATP binding (GO:0005524);; Biological Process: glutamyl-tRNA aminoacylation (GO:0006424);; Molecular Function: zinc ion binding (GO:0008270);; ","K01885|5.7e-195|oeu:111410513|K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] | (RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial","[J]","Translation, ribosomal structure and biogenesis ","tRNA synthetases class I (E and Q), catalytic domain","Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Glutamyl-tRNA synthetase OS=Nyssa sinensis OX=561372 GN=F0562_028387 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","glutamate--tRNA ligase, chloroplastic/mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Porphyrin and chlorophyll metabolism (ko00860);; Aminoacyl-tRNA biosynthesis (ko00970)"]
["c105971.graph_c0",18,0.66,12,0.41,8,0.3,290,10.9,312,13.46,390,14.56,3.87e-54,4.285457602,"up","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Biological Process: proteolysis (GO:0006508);; Biological Process: protein catabolic process (GO:0030163);; ","K22683|6.7e-268|oeu:111384916|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Aspartyl protease family protein 2 OS=Arabidopsis thaliana OX=3702 GN=APF2 PE=2 SV=1","Peptidase A1 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005685mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartyl protease family protein 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c106331.graph_c0",229,7.33,242,7.87,206,7.24,141,4.75,128,4.86,151,5.08,1.3e-10,-1.004766301,"down","--","--","Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: protein dimerization activity (GO:0046983);; ","K18878|2.1e-18|cann:107866053|K18878 BHLH transcription factor Upa20 | (RefSeq) Upa20; transcription factor bHLH137-like","--","--","--","Transcription factor bHLH62 OS=Arabidopsis thaliana OX=3702 GN=BHLH62 PE=2 SV=1","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17562 PE=4 SV=1","K","Transcription","transcription factor bHLH78-like [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c101061.graph_c1",119,19.71,128,19.58,137,23.56,86,13.53,73,13.82,52,7.97,8.05e-07,-1.163839985,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K03798|8.6e-28|vvi:100266289|K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain","Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2","Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31480 PE=4 SV=1","S","Function unknown","Pentatricopeptide repeat-containing protein [Actinidia chinensis var. chinensis]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106898.graph_c0",124,4.29,150,4.56,106,3.56,372,12.56,539,22.38,562,21.6,1.94e-21,1.627059106,"up","--","--","Biological Process: biological_process (GO:0008150);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of stomatal opening (GO:1902456);; ","K10144|6.1e-97|cpap:110822245|K10144 RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RZFP34","[R]","General function prediction only ","Zinc-ribbon;; Ring finger domain;; RING-type zinc-finger;; CHY zinc finger","E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1","RING finger and CHY zinc finger domain-containing protein 1 (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_23465 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","hypothetical protein HYC85_025181 [Camellia sinensis]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","Ubiquitin mediated proteolysis (ko04120)"]
["c100137.graph_c0",24,1.5,20,1.13,24,1.5,2,0.1,2,0.12,0,0,9.02e-08,-3.679349423,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103011.graph_c1",125,5.5,107,4.56,82,3.09,2,0.08,3,0.13,8,0.61,8.44e-27,-4.636962639,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108351.graph_c0",113,2.42,105,2.33,100,2.22,54,1.19,73,1.83,69,1.51,2.16e-05,-1.001773426,"down","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: nuclear division (GO:0000280);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: organelle organization (GO:0006996);; Biological Process: cell cycle (GO:0007049);; Biological Process: male meiotic nuclear division (GO:0007140);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: gamete generation (GO:0007276);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: xylem development (GO:0010089);; Biological Process: fruit development (GO:0010154);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellular process involved in reproduction in multicellular organism (GO:0022412);; Biological Process: reproductive process (GO:0022414);; Biological Process: root system development (GO:0022622);; Biological Process: signaling (GO:0023052);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: multicellular organism reproduction (GO:0032504);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: protein modification process (GO:0036211);; Biological Process: response to chemical (GO:0042221);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: multi-organism reproductive process (GO:0044703);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: male gamete generation (GO:0048232);; Biological Process: organelle fission (GO:0048285);; Biological Process: seed development (GO:0048316);; Biological Process: root development (GO:0048364);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: meiotic cell cycle (GO:0051321);; Biological Process: multi-organism process (GO:0051704);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: metaxylem development (GO:0090058);; Biological Process: plant organ development (GO:0099402);; Biological Process: meiotic nuclear division (GO:0140013);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: meiotic cell cycle process (GO:1903046);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","bHLH-MYC and R2R3-MYB transcription factors N-terminal","Transcription factor bHLH157 OS=Arabidopsis thaliana OX=3702 GN=BHLH157 PE=1 SV=1","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25283 PE=4 SV=1","S","Function unknown","transcription factor bHLH157-like [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","--"]
["c109239.graph_c0",274,6.29,270,6.22,256,6.19,821,20.08,837,23.17,994,24.3,2.4e-41,1.400670005,"up","--","--","Cellular Component: cytosol (GO:0005829);; Molecular Function: lipid binding (GO:0008289);; Molecular Function: sterol transporter activity (GO:0015248);; Cellular Component: membrane (GO:0016020);; Molecular Function: sterol binding (GO:0032934);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","K20456|0.0e+00|oeu:111376605|K20456 oxysterol-binding protein 1 | (RefSeq) oxysterol-binding protein-related protein 1D-like isoform X1","[I]","Lipid transport and metabolism ","Oxysterol-binding protein;; Pleckstrin homology domain;; PH domain;; Oxysterol-binding protein","Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana OX=3702 GN=ORP1D PE=2 SV=1","PH domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001454mg PE=4 SV=1","I","Lipid transport and metabolism","oxysterol-binding protein-related protein 1D-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226)","--"]
["c83331.graph_c0",0,0,0,0,0,0,20,0.71,22,0.94,25,0.92,2.82e-07,4.464684769,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);; ","K20027|1.1e-122|oeu:111389762|K20027 palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] | (RefSeq) protein S-acyltransferase 18","[R]","General function prediction only ","DHHC palmitoyltransferase","Protein S-acyltransferase 18 OS=Arabidopsis thaliana OX=3702 GN=PAT18 PE=2 SV=2","S-acyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07201 PE=3 SV=1","S","Function unknown","protein S-acyltransferase 18 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c116438.graph_c1",255,4.94,310,5.54,293,5.72,56,1.7,51,1.26,47,1.02,4.32e-50,-2.772111098,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K15601|2.2e-42|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1205 PE=4 SV=1","L","Replication, recombination and repair","PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X4 [Daucus carota subsp. sativus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c104429.graph_c3",1195,63.44,1214,61.24,1036,56.94,625,33.86,605,37.53,594,32.03,7.59e-47,-1.233057346,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","uncharacterized protein LOC107816711 OS=Nicotiana tabacum OX=4097 GN=LOC107816711 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111388717 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110589.graph_c0",49,0.81,62,1.09,48,1.04,251,4.95,247,5.11,289,5.6,1.13e-24,1.965421164,"up","[KL]","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: ATP binding (GO:0005524);; ","K14440|1.7e-61|gab:108486715|K14440 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12] | (RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1","[B]","Chromatin structure and dynamics ","Helicase conserved C-terminal domain;; HNH endonuclease;; SNF2 family N-terminal domain","TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana OX=3702 GN=BTAF1 PE=1 SV=1","Putative DNA annealing helicase and endonuclease ZRANB3 isoform X1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041013 PE=4 SV=1","B","Chromatin structure and dynamics","DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152)","--"]
["c91649.graph_c0",64,8.88,77,10.03,81,11.5,246,34.95,208,33.88,178,25.1,1.89e-08,1.176805615,"up","--","--","--","--","--","--","--","Light-harvesting complex-like protein OHP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP1 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_047533 PE=4 SV=1","S","Function unknown","light-harvesting complex-like protein OHP1, chloroplastic [Sesamum indicum]","--","--"]
["c89924.graph_c0",27,3.8,47,6.22,31,4.47,4,0.58,0,0,6,0.86,2.54e-09,-3.363361637,"down","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02993|2.8e-53|cre:CHLREDRAFT_179706|K02993 small subunit ribosomal protein S7e | (RefSeq) RPS7; ribosomal protein S7","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S7e","40S ribosomal protein S7 OS=Avicennia marina OX=82927 GN=RPS7 PE=2 SV=1","40S ribosomal protein S7 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpS7_0 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","40S ribosomal protein S7-like [Rhodamnia argentea]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c106661.graph_c0",117,3.23,93,2.46,79,2.37,987,27.33,811,25.58,941,25.77,6.13e-107,2.907014043,"up","[IQ]","--","Molecular Function: ligase activity (GO:0016874);; ","K01904|1.9e-212|oeu:111367091|K01904 4-coumarate--CoA ligase [EC:6.2.1.12] | (RefSeq) 4-coumarate--CoA ligase-like 9 isoform X1","[I]","Lipid transport and metabolism ","AMP-binding enzyme;; AMP-binding enzyme C-terminal domain","4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana OX=3702 GN=4CLL9 PE=1 SV=2","4-coumarate--CoA ligase OS=Sesamum indicum OX=4182 GN=4CL PE=2 SV=1","I","Lipid transport and metabolism","4-coumarate--CoA ligase-like 9 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Phenylpropanoid biosynthesis (ko00940)"]
["c116255.graph_c0",56,5.06,69,6.4,58,4.94,35,4.66,23,3.95,32,4.07,2.64e-05,-1.314697998,"down","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K14432|1.6e-48|oeu:111366243|K14432 ABA responsive element binding factor | (RefSeq) protein ABSCISIC ACID-INSENSITIVE 5-like","--","--","bZIP transcription factor;; Basic region leucine zipper;; bZIP Maf transcription factor","Protein ABSCISIC ACID-INSENSITIVE 5 OS=Arabidopsis thaliana OX=3702 GN=ABI5 PE=1 SV=1","BZIP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01575 PE=4 SV=1","K","Transcription","protein ABSCISIC ACID-INSENSITIVE 5-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c107099.graph_c0",1265,90.8,1383,97.21,1271,94.59,657,48.33,581,47.9,675,50.01,6.29e-71,-1.356170416,"down","--","--","Molecular Function: RNA binding (GO:0003723);; ","K12890|1.4e-97|oeu:111389727|K12890 splicing factor, arginine/serine-rich 1 | (RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1","[A]","RNA processing and modification ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00000657001 PE=4 SV=1","A","RNA processing and modification","serine/arginine-rich splicing factor SR30-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Spliceosome (ko03040)"]
["c107506.graph_c1",0,0,0,0,0,0,27,0.82,21,0.73,20,0.61,2.46e-07,4.482161378,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111391932 [Olea europaea var. sylvestris]","--","--"]
["c117102.graph_c0",6069,111.33,6138,104.68,6094,110.32,2193,41.47,1924,41.31,2138,37.63,3.04e-248,-1.871467452,"down","--","--","Biological Process: signal transduction (GO:0007165);; ","--","[T]","Signal transduction mechanisms ","T-complex protein 11;; T-complex protein 11","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000411mg PE=3 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111409838 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c116052.graph_c0",38,1.42,51,1.62,31,1.96,279,63.9,186,50.13,219,50.08,4.36e-21,2.158508772,"up","--","--","Biological Process: ribosomal large subunit assembly (GO:0000027);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Cellular Component: ribosome (GO:0005840);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Cellular Component: large ribosomal subunit (GO:0015934);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: ribonucleoprotein complex assembly (GO:0022618);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Cellular Component: cytosolic ribosome (GO:0022626);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular protein-containing complex assembly (GO:0034622);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: ribosome assembly (GO:0042255);; Biological Process: ribosomal large subunit biogenesis (GO:0042273);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Cellular Component: ribosomal subunit (GO:0044391);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cytosolic part (GO:0044445);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: protein-containing complex assembly (GO:0065003);; Biological Process: organelle assembly (GO:0070925);; Biological Process: ribonucleoprotein complex subunit organization (GO:0071826);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Cellular Component: ribonucleoprotein complex (GO:1990904);; ","K03935|5.7e-14|lsv:111880662|K03935 NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2] | (RefSeq) uncharacterized protein LOC111880662","--","--","--","60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2","F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07543 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111398113 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422)","Oxidative phosphorylation (ko00190)"]
["c110727.graph_c0",5,0.32,0,0,0,0,19,0.81,46,2.92,37,2.08,0.004018302,2.674493151,"up","--","--","--","--","--","--","Protein of unknown function (DUF620)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25339 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111389323 [Olea europaea var. sylvestris]","--","--"]
["c115522.graph_c0",55,1.04,62,1.11,74,1.44,41,0.79,37,0.82,37,0.71,0.000602032,-1.032491447,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","--","[R]","General function prediction only ","--","--","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35823 PE=4 SV=1","--","--","hypothetical protein CRG98_011656 [Punica granatum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108724.graph_c0",587,22.9,602,21.74,468,19.19,1376,59.93,1307,64.45,1551,71.21,3.17e-33,1.029908258,"up","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: oligosaccharyltransferase complex (GO:0008250);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein N-linked glycosylation via asparagine (GO:0018279);; ","K12670|9.3e-116|oeu:111401067|K12670 oligosaccharyltransferase complex subunit beta | (RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like","[O]","Posttranslational modification, protein turnover, chaperones ","Oligosaccharyltransferase 48 kDa subunit beta","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Arabidopsis thaliana OX=3702 GN=OST48 PE=2 SV=1","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a0072661mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","N-Glycan biosynthesis (ko00510);; Various types of N-glycan biosynthesis (ko00513);; Protein processing in endoplasmic reticulum (ko04141)"]
["c104044.graph_c0",5,0.2,1,0.04,6,0.24,277,11.11,235,10.84,274,10.94,2.58e-41,5.418010791,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: cellulase activity (GO:0008810);; ","K01179|3.4e-173|oeu:111392407|K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) uncharacterized protein LOC111392407 isoform X1","--","--","Cellulase (glycosyl hydrolase family 5)","Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1","Mannan endo-1,4-beta-mannosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20188 PE=3 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111392407 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c106123.graph_c0",82,4.85,63,3.4,74,4.69,591,37.38,570,41.2,635,39.61,1.29e-73,2.694994661,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: ferroxidase activity (GO:0004322);; Biological Process: iron ion transport (GO:0006826);; Biological Process: cellular iron ion homeostasis (GO:0006879);; Molecular Function: ferric iron binding (GO:0008199);; ","K00522|8.0e-127|oeu:111380006|K00522 ferritin heavy chain [EC:1.16.3.2] | (RefSeq) ferritin-3, chloroplastic-like","[P]","Inorganic ion transport and metabolism ","Ferritin-like domain","Ferritin-2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=FER2 PE=2 SV=1","Ferritin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12786 PE=3 SV=1","P","Inorganic ion transport and metabolism","ferritin-3, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c85613.graph_c0",214,18,257,20.39,167,14.43,95,8.18,109,10.75,105,8.99,4.34e-13,-1.34621124,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c85857.graph_c0",625,30.87,579,27.08,463,23.52,8128,408.14,8130,467.64,8626,430.78,0,3.576179315,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endosome (GO:0005768);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: trans-Golgi network (GO:0005802);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: biological_process (GO:0008150);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Cellular Component: vesicle (GO:0031982);; Cellular Component: organelle subcompartment (GO:0031984);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete Golgi apparatus part (GO:0044431);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: intracellular vesicle (GO:0097708);; Cellular Component: Golgi apparatus subcompartment (GO:0098791);; ","K12472|4.8e-32|bvg:104885038|K12472 epidermal growth factor receptor substrate 15 | (RefSeq) filaggrin-like","--","--","BURP domain","BURP domain protein RD22 OS=Arabidopsis thaliana OX=3702 GN=RD22 PE=2 SV=1","BURP domain protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12497 PE=4 SV=1","S","Function unknown","BURP domain protein RD22-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: response to stimulus (GO:0050896)","Endocytosis (ko04144)"]
["c103162.graph_c0",125,5.77,154,7.06,117,5.84,68,9.32,65,10.06,88,11.77,6.83e-08,-1.150772492,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K00924|1.5e-39|csat:104712177|K00924 kinase [EC:2.7.1.-] | (RefSeq) probable receptor-like protein kinase At3g55450 isoform X1","[T]","Signal transduction mechanisms ","--","Probable serine/threonine-protein kinase PIX7 OS=Arabidopsis thaliana OX=3702 GN=PIX7 PE=1 SV=1","Putative serine/threonine-protein kinase PIX7 OS=Vitis vinifera OX=29760 GN=PIX7_7 PE=4 SV=1","T","Signal transduction mechanisms","probable serine/threonine-protein kinase PIX7 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c111559.graph_c0",37,1.31,41,1.4,34,1.24,502,17.98,680,27.71,807,28.04,2.39e-81,3.785939516,"up","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: terpene synthase activity (GO:0010333);; ","K14175|4.4e-162|oeu:111396015|K14175 (3S,6E)-nerolidol synthase [EC:4.2.3.48] | (RefSeq) tricyclene synthase Oc15, chloroplastic-like","--","--","Terpene synthase, N-terminal domain;; Terpene synthase family, metal binding domain;; Terpene synthase family, metal binding domain;; Terpene synthase family 2, C-terminal metal binding","Tricyclene synthase Oc15, chloroplastic OS=Antirrhinum majus OX=4151 GN=Oc15 PE=1 SV=1","Plastid terpene synthase OS=Osmanthus fragrans OX=93977 GN=TPS2 PE=2 SV=1","S","Function unknown","plastid terpene synthase [Osmanthus fragrans]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","Sesquiterpenoid and triterpenoid biosynthesis (ko00909)"]
["c114629.graph_c2",2,0.18,3,0.31,6,0.55,37,1.82,28,1.15,44,2.24,1.51e-06,2.692662644,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101228.graph_c1",13,0.39,7,0.46,4,0.11,400,14.26,402,15.62,425,13.92,1.21e-63,5.204324973,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Molecular Function: ATPase-coupled sulfate transmembrane transporter activity (GO:0015419);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K08712|2.6e-38|gsl:Gasu_29800|K08712 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 | (RefSeq) ABC transporter, ATP-binding protein","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-2 type transporter;; ABC-2 type transporter","ABC transporter G family member 32 OS=Arabidopsis thaliana OX=3702 GN=ABCG32 PE=1 SV=1","Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19379 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 32-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","ABC transporters (ko02010)"]
["c87321.graph_c0",335,21.79,428,26.29,329,22.01,176,11.76,184,14.06,203,13.48,5.24e-20,-1.268149688,"down","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K08200|3.5e-09|cre:CHLREDRAFT_191717|K08200 MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 3 | (RefSeq) predicted protein","[R]","General function prediction only ","Sugar (and other) transporter","Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1","Putative organic cation/carnitine transporter 7 OS=Davidia involucrata OX=16924 GN=Din_035146 PE=3 SV=1","C","Energy production and conversion","organic cation/carnitine transporter 7 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c111882.graph_c0",465,14.57,327,9.78,293,9.81,195,5.72,113,3.97,151,4.7,3.1e-17,-1.553563017,"down","--","--","--","--","--","--","Leucine rich repeat","Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1","pollen-specific leucine-rich repeat extensin-like protein 4 OS=Nicotiana tabacum OX=4097 GN=LOC107796977 PE=4 SV=1","S","Function unknown","pollen-specific leucine-rich repeat extensin-like protein 1 [Olea europaea var. sylvestris]","--","--"]
["c91952.graph_c0",19,4.3,17,3.6,21,4.85,42,9.76,49,13.07,70,16.11,0.003045391,1.122503069,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K23232|6.4e-79|oeu:111385603|K23232 8-hydroxygeraniol dehydrogenase [EC:1.1.1.324] | (RefSeq) 8-hydroxygeraniol dehydrogenase-like isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Zinc-binding dehydrogenase;; Alanine dehydrogenase/PNT, C-terminal domain;; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain","Probable mannitol dehydrogenase OS=Fragaria ananassa OX=3747 GN=CAD PE=2 SV=1","PKS_ER domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_039541 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","8-hydroxygeraniol dehydrogenase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Monoterpenoid biosynthesis (ko00902)"]
["c86001.graph_c0",100,12.64,108,12.84,83,10.77,18,2.33,13,1.93,11,1.41,5.77e-21,-3.019253952,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017270mg PE=4 SV=1","--","--","uncharacterized protein LOC111411626 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97574.graph_c1",24,1.14,40,1.8,36,1.89,7,0.34,16,1.57,19,2.06,0.001089407,-1.486578489,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105428.graph_c1",24,1.42,34,1.9,16,1.04,96,5.48,115,7.81,149,8.44,1.46e-10,1.915723062,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101263742 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111369366 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c71359.graph_c0",9,0.81,10,0.85,6,0.56,613,56.59,835,88.44,907,83.21,5.99e-90,6.068795464,"up","--","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; ","--","--","--","Plant invertase/pectin methylesterase inhibitor","Putative invertase inhibitor OS=Platanus acerifolia OX=140101 PE=1 SV=1","Invertase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_19060 PE=4 SV=1","S","Function unknown","putative invertase inhibitor [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c103709.graph_c1",63,2.23,49,1.64,61,2.23,17,0.62,22,0.91,23,0.83,3.51e-07,-1.748188033,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92451.graph_c0",3,0.15,0,0,0,0,106,6.24,100,6.76,116,6.84,1.6e-19,5.507032698,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","K14787|4.5e-35|oeu:111401004|K14787 multiple RNA-binding domain-containing protein 1 | (RefSeq) LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like","--","--","--","--","Putative multiple RNA-binding domain-containing protein 1 OS=Davidia involucrata OX=16924 GN=Din_045307 PE=4 SV=1","A","RNA processing and modification","LOW QUALITY PROTEIN: multiple RNA-binding domain-containing protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c114157.graph_c0",135,3.41,171,4.05,126,3.29,356,9.15,355,10.45,377,9.4,7.12e-12,1.008650574,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Molecular Function: uridylyltransferase activity (GO:0070569);; ","K00963|2.2e-210|oeu:111410431|K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] | (RefSeq) UTP--glucose-1-phosphate uridylyltransferase-like","[G]","Carbohydrate transport and metabolism ","UTP--glucose-1-phosphate uridylyltransferase;; Ribosomal protein S2","UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum OX=4113 PE=1 SV=3","Utp--glucose-1-phosphate uridylyltransferase OS=Nicotiana attenuata OX=49451 GN=UGPA_1 PE=3 SV=1","--","--","UTP--glucose-1-phosphate uridylyltransferase-like [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c113555.graph_c0",623,19.39,733,19.09,708,20.77,441,14.58,348,12.09,400,13.07,1.89e-25,-1.117095567,"down","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: response to acid chemical (GO:0001101);; Biological Process: regulation of neurotransmitter levels (GO:0001505);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: nitric-oxide synthase activity (GO:0004517);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of carbohydrate metabolic process (GO:0006109);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: nitric oxide biosynthetic process (GO:0006809);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: organelle organization (GO:0006996);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: plastid organization (GO:0009657);; Biological Process: plastid membrane organization (GO:0009668);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: thylakoid membrane organization (GO:0010027);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to ozone (GO:0010193);; Biological Process: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway (GO:0010322);; Biological Process: regulation of cellular ketone metabolic process (GO:0010565);; Biological Process: regulation of cellular carbohydrate metabolic process (GO:0010675);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: pyrophosphatase activity (GO:0016462);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on acid anhydrides (GO:0016817);; Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Biological Process: drug metabolic process (GO:0017144);; Biological Process: regulation of lipid metabolic process (GO:0019216);; Biological Process: regulation of phosphate metabolic process (GO:0019220);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of isoprenoid metabolic process (GO:0019747);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: neurotransmitter metabolic process (GO:0042133);; Biological Process: neurotransmitter biosynthetic process (GO:0042136);; Biological Process: response to chemical (GO:0042221);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: response to drug (GO:0042493);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: nitric oxide metabolic process (GO:0046209);; Biological Process: response to antibiotic (GO:0046677);; Biological Process: regulation of lipid biosynthetic process (GO:0046890);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of phosphorus metabolic process (GO:0051174);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: membrane organization (GO:0061024);; Biological Process: regulation of small molecule metabolic process (GO:0062012);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: regulation of phospholipid biosynthetic process (GO:0071071);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: plant organ development (GO:0099402);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: reactive oxygen species biosynthetic process (GO:1903409);; Biological Process: regulation of phospholipid metabolic process (GO:1903725);; Biological Process: reactive nitrogen species metabolic process (GO:2001057);; ","K13427|1.7e-196|oeu:111390921|K13427 nitric-oxide synthase, plant [EC:1.14.13.39] | (RefSeq) putative nitric oxide synthase","[R]","General function prediction only ","50S ribosome-binding GTPase","NO-associated protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOA1 PE=1 SV=1","Putative GTPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13415 PE=4 SV=1","S","Function unknown","putative nitric oxide synthase [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502)","Arginine biosynthesis (ko00220);; Arginine and proline metabolism (ko00330);; Plant-pathogen interaction (ko04626)"]
["c105793.graph_c2",33,6.89,37,7.23,47,10.01,9,1.93,10,2.46,11,2.34,5.92e-07,-2.171074304,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102702.graph_c2",81,9.81,53,7.15,80,10.12,33,4.06,36,6.3,42,4.33,3.96e-05,-1.246648167,"down","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K14432|1.0e-52|oeu:111408794|K14432 ABA responsive element binding factor | (RefSeq) bZIP transcription factor 46-like isoform X1","--","--","bZIP transcription factor;; Basic region leucine zipper","ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=ABF2 PE=1 SV=1","bZIP transcription factor TRAB1-like OS=Nicotiana tabacum OX=4097 GN=LOC107790244 PE=4 SV=1","K","Transcription","bZIP transcription factor 46-like isoform X3 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Plant hormone signal transduction (ko04075)"]
["c111148.graph_c0",14,0.37,16,0.59,25,0.76,51,1.47,41,1.14,72,1.54,0.002374216,1.184988684,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|2.4e-19|han:110910940|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase TMK1-like","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Protein tyrosine and serine/threonine kinase;; Leucine Rich Repeat","Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana OX=3702 GN=At3g03770 PE=1 SV=1","Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_017616 PE=4 SV=1","T","Signal transduction mechanisms","probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102476.graph_c0",4,0.12,2,0.06,1,0.03,40,1.27,40,1.45,39,1.23,1.57e-08,3.351497315,"up","--","--","--","--","--","--","Plant organelle RNA recognition domain","Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1","PORR domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22801 PE=4 SV=1","S","Function unknown","protein ROOT PRIMORDIUM DEFECTIVE 1 [Olea europaea var. sylvestris]","--","--"]
["c111829.graph_c0",103,3.69,124,4.15,135,4.9,83,3.07,54,2.31,72,2.67,1.66e-06,-1.106954196,"down","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","--","--","--","Ribosomal protein S21","30S ribosomal protein S21, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps21 PE=1 SV=2","30S ribosomal protein S21 OS=Morus notabilis OX=981085 GN=L484_002683 PE=3 SV=1","S","Function unknown","30S ribosomal protein S21, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c60172.graph_c0",65,2.8,57,2.32,37,1.64,1,0.04,1,0.05,2,0.09,1.53e-15,-4.878493704,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: quercetin 3-O-glucosyltransferase activity (GO:0080043);; Molecular Function: quercetin 7-O-glucosyltransferase activity (GO:0080044);; ","K13691|1.1e-125|oeu:111378209|K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74E2-like","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","UDP glycosyltransferase 9 OS=Catharanthus roseus OX=4058 GN=UGT9 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a006158mg PE=4 SV=1","--","--","UDP-glycosyltransferase 74E2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c98162.graph_c0",233,19.98,264,20.54,242,20.57,123,9.97,98,9.22,93,7.97,1.08e-19,-1.542960075,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K05278|5.0e-31|fve:101296827|K05278 flavonol synthase [EC:1.14.20.6] | (RefSeq) flavonol synthase/flavanone 3-hydroxylase-like","[QR]","--","2OG-Fe(II) oxygenase superfamily","Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida OX=4102 GN=FL PE=2 SV=1","Fe2OG dioxygenase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_021001 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","codeine O-demethylase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Flavonoid biosynthesis (ko00941)"]
["c115323.graph_c0",255,7.13,256,8.84,209,6.88,633,24.96,593,20.39,638,24.92,2.52e-20,1.048731987,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K10398|1.1e-11|eus:EUTSA_v10016147mg|K10398 kinesin family member 11 | (RefSeq) hypothetical protein","--","--","D-mannose binding lectin","G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2","Receptor-like serine/threonine-protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26051 PE=3 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c90129.graph_c0",2,0.18,4,0.31,3,0.25,41,3.25,41,3.86,33,2.77,1.06e-07,3.028985576,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: nucleoside-triphosphate diphosphatase activity (GO:0047429);; ","K06287|3.0e-84|sind:105177987|K06287 septum formation protein | (RefSeq) maf-like protein DDB_G0281937","[D]","Cell cycle control, cell division, chromosome partitioning ","Maf-like protein","--","Putative nucleic acid-binding protein ASMTL OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20350 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","maf-like protein DDB_G0281937 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824)","--"]
["c100749.graph_c2",54,11.85,57,12.49,53,12.57,12,2.42,7,1.88,15,3.43,1.05e-10,-2.493070597,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_005561 PE=4 SV=1","S","Function unknown","putative WEB family protein At1g65010, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c111568.graph_c0",1061,52.92,1148,54.04,1030,52.95,682,34.61,559,32.68,699,35.44,2.99e-39,-1.062633978,"down","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","--","[O]","Posttranslational modification, protein turnover, chaperones ","--","E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1","Putative E3 ubiquitin-protein ligase-like OS=Solanum chacoense OX=4108 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin-protein ligase At3g02290-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c94766.graph_c0",12,0.83,13,0.73,6,0.35,61,3.61,70,4.94,97,5.98,3.44e-10,2.447064459,"up","--","--","Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; ","--","--","--","Ubiquitin-binding WIYLD domain","--","WIYLD domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_047982 PE=4 SV=1","S","Function unknown","probable inactive histone-lysine N-methyltransferase SUVR1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c110476.graph_c0",229,20.9,255,21.45,212,19.18,627,78.6,641,89.61,707,85.72,1.07e-25,1.180089649,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08311 PE=4 SV=1","--","--","uncharacterized protein LOC111390292 [Olea europaea var. sylvestris]","--","--"]
["c107467.graph_c1",907,102.08,1006,112.31,833,98.49,2494,222.89,2616,272.52,2766,249.07,7.16e-61,1.199809832,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02938|5.6e-150|oeu:111393450|K02938 large subunit ribosomal protein L8e | (RefSeq) 60S ribosomal protein L8","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal Proteins L2, C-terminal domain;; Ribosomal Proteins L2, RNA binding domain","60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1","Ribosomal protein L2 OS=Macleaya cordata OX=56857 GN=BVC80_8997g16 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L8 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c108132.graph_c0",10,0.34,14,0.45,11,0.39,32,1.14,35,1.39,38,1.32,0.008215477,1.197648682,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K08869|4.8e-06|cre:CHLREDRAFT_165812|K08869 aarF domain-containing kinase | (RefSeq) predicted protein","[O]","Posttranslational modification, protein turnover, chaperones ","--","Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1","Transcription factor SRM1 OS=Glycine soja OX=3848 GN=D0Y65_052778 PE=4 SV=1","K","Transcription","transcription factor SRM1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c99308.graph_c0",5,0.19,5,0.18,6,0.21,32,1.11,38,1.52,46,1.6,4.04e-06,2.343941695,"up","--","--","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K19791|3.4e-201|han:110912433|K19791 iron transport multicopper oxidase | (RefSeq) L-ascorbate oxidase homolog","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_019141 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","L-ascorbate oxidase homolog [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c88778.graph_c0",85,3.56,116,4.59,76,3.28,25,1.07,15,0.74,13,0.56,4.11e-16,-2.622248492,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K09422|4.2e-128|oeu:111387813|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB44-like","[K]","Transcription ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1","R2R3-MYB protein OS=Rehmannia glutinosa OX=99300 GN=MYB20 PE=2 SV=1","K","Transcription","transcription factor MYB44-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c103478.graph_c1",30,1.71,18,0.96,33,1.94,135,7.76,152,9.98,146,8.42,6.59e-14,2.051151042,"up","--","--","--","K22763|2.5e-141|oeu:111374057|K22763 deubiquitinase DESI2 [EC:3.4.19.12] | (RefSeq) deSI-like protein At4g17486","[S]","Function unknown ","PPPDE putative peptidase domain","DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1","DUF862 domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00024846001 PE=3 SV=1","S","Function unknown","deSI-like protein At4g17486 [Olea europaea var. sylvestris]","--","--"]
["c103168.graph_c0",174,9.36,136,6.96,123,6.82,76,4.18,58,3.66,56,3.07,3.95e-11,-1.487796577,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=107063350 PE=4 SV=1","--","--","uncharacterized protein LOC111388778 [Olea europaea var. sylvestris]","--","--"]
["c116335.graph_c0",20,0.65,14,0.41,16,0.52,139,4.67,134,5.18,140,4.67,1.29e-19,2.658465775,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: DNA integration (GO:0015074);; ","K12447|1.4e-38|csat:109127935|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC109127935","[R]","General function prediction only ","Retrotransposon gag protein","--","Integrase, catalytic core OS=Corchorus capsularis OX=210143 GN=CCACVL1_08519 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111411399 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c110437.graph_c2",393876,10685.99,409248,10511.78,383413,10723.83,147303,5810.93,107769,4857.71,128678,5074.2,6.63e-197,-1.95218212,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Molecular Function: metal ion binding (GO:0046872);; ","K09840|3.8e-263|sind:105172767|K09840 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] | (RefSeq) probable carotenoid cleavage dioxygenase 4, chloroplastic","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Retinal pigment epithelial membrane protein","Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCD4 PE=1 SV=1","Carotenoid cleavage dioxygenase 4 OS=Osmanthus fragrans OX=93977 GN=CCD4 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","carotenoid cleavage dioxygenase 4 [Osmanthus fragrans]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Carotenoid biosynthesis (ko00906)"]
["c108383.graph_c0",15,0.32,13,0.28,7,0.13,56,0.96,66,1.3,76,1.3,7.35e-08,2.090872311,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09565 PE=4 SV=1","--","--","uncharacterized protein LOC111406295 [Olea europaea var. sylvestris]","--","--"]
["c112157.graph_c0",0,0,1,0.03,0,0,40,1.29,56,2.33,67,2.24,3.07e-12,5.173513521,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endosome (GO:0005768);; Cellular Component: endosome membrane (GO:0010008);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Cellular Component: vesicle (GO:0031982);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic vesicle part (GO:0044433);; Cellular Component: obsolete endosomal part (GO:0044440);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: intracellular vesicle (GO:0097708);; Cellular Component: bounding membrane of organelle (GO:0098588);; Cellular Component: whole membrane (GO:0098805);; ","K20285|1.5e-166|oeu:111409990|K20285 Rab9 effector protein with kelch motifs | (RefSeq) uncharacterized protein LOC111409990 isoform X1","--","--","Kelch motif;; Galactose oxidase, central domain;; Galactose oxidase, central domain;; Kelch motif;; Kelch motif;; Kelch motif","--","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_016538 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111409990 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422)","--"]
["c44053.graph_c0",50,10.3,35,6.75,37,7.78,0,0,0,0,1,0.21,4.28e-13,-5.351321948,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111880.graph_c0",10,0.44,8,0.54,16,1.03,55,2.06,67,3.36,63,3.72,4.12e-07,2.02548744,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112054.graph_c0",10,0.36,14,0.44,9,0.35,106,4.45,65,3.02,91,3.92,3.83e-12,2.560783113,"up","--","--","--","--","--","--","Plant protein of unknown function (DUF868)","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_003861 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111368259 [Olea europaea var. sylvestris]","--","--"]
["c72341.graph_c0",27,5.64,30,5.92,24,5.14,74,16.15,68,16.89,84,17.78,0.000250574,1.128163683,"up","--","--","Biological Process: defense response (GO:0006952);; ","--","--","--","--","Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16751 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111382714 isoform X1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c117339.graph_c0",3099,76.82,3442,82.36,3136,81.04,1826,51.21,1430,46.14,1741,48.27,1.52e-83,-1.277205338,"down","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (GO:0047130);; ","K14157|0.0e+00|oeu:111403740|K14157 alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9] | (RefSeq) alpha-aminoadipic semialdehyde synthase","[E]","Amino acid transport and metabolism ","Alanine dehydrogenase/PNT, N-terminal domain;; LOR/SDH bifunctional enzyme conserved region;; Saccharopine dehydrogenase C-terminal domain;; Saccharopine dehydrogenase NADP binding domain;; Alanine dehydrogenase/PNT, C-terminal domain;; eRF1 domain 2;; eRF1 domain 3;; eRF1 domain 1;; Saccharopine dehydrogenase C-terminal domain","Alpha-aminoadipic semialdehyde synthase OS=Arabidopsis thaliana OX=3702 GN=LKR/SDH PE=1 SV=1","Lysine ketoglutarate reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13500 PE=4 SV=1","E","Amino acid transport and metabolism","alpha-aminoadipic semialdehyde synthase [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Lysine degradation (ko00310)"]
["c100026.graph_c0",37,2.31,36,1.31,39,1.27,242,8.04,303,11.73,360,11.8,7.99e-35,2.654812531,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA helicase activity (GO:0003724);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: methyltransferase activity (GO:0008168);; ","K14563|9.7e-98|oeu:111373631|K14563 rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] | (RefSeq) probable mediator of RNA polymerase II transcription subunit 36b isoform X1","[A]","RNA processing and modification ","Fibrillarin;; tRNA methyltransferase complex GCD14 subunit;; Fibrillarin","rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1","Fibrillarin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02174 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","probable mediator of RNA polymerase II transcription subunit 36b isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Ribosome biogenesis in eukaryotes (ko03008)"]
["c113030.graph_c0",1546,163.46,1682,170.61,1479,165.28,807,84.34,858,102.29,879,87,1.22e-56,-1.205027377,"down","--","--","Molecular Function: O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (GO:0033829);; ","K14780|1.7e-69|dcr:108220614|K14780 ATP-dependent RNA helicase DHX37/DHR1 [EC:3.6.4.13] | (RefSeq) ATP-dependent RNA helicase DEAH13-like isoform X1","[G]","Carbohydrate transport and metabolism ","Protein of unknown function, DUF604;; Fringe-like","--","Galactosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08994 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111389732 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c102533.graph_c0",7,1.4,5,0.89,7,1.64,45,2.94,36,2.49,48,3.67,1.93e-06,2.275049398,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c88907.graph_c0",0,0,2,0.36,0,0,69,12.49,66,13.94,49,9.25,2.92e-13,5.0126036,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: transcription coregulator activity (GO:0003712);; Molecular Function: transcription corepressor activity (GO:0003714);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: regulation of defense response (GO:0031347);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of response to stress (GO:0080134);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","Jas motif","--","Tify domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_025674 PE=3 SV=1","S","Function unknown","protein TIFY 5A-like [Olea europaea var. sylvestris]","molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)","--"]
["c103963.graph_c0",4,0.09,4,0.09,2,0.05,39,1.01,64,1.95,70,1.72,4.61e-11,3.472398175,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10398|1.2e-253|ccav:112522138|K10398 kinesin family member 11 | (RefSeq) kinesin-like protein KIN-10A","[Z]","Cytoskeleton ","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-10A OS=Arabidopsis thaliana OX=3702 GN=KIN10A PE=1 SV=1","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25704 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-10A [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c114307.graph_c0",686,26.99,706,26.28,606,24.59,400,16.13,363,16.77,321,12.85,5.51e-26,-1.194299049,"down","[QV]","--","Molecular Function: iron ion binding (GO:0005506);; Molecular Function: heme binding (GO:0020037);; Molecular Function: isoflavone 2'-hydroxylase activity (GO:0033773);; ","K13260|1.9e-176|nau:109240371|K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) isoflavone 2'-hydroxylase-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450","Cytochrome P450 81Q32 OS=Catharanthus roseus OX=4058 GN=CYP81Q32 PE=2 SV=1","Cytochrome P450 CYP2 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25928 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 81E8-like isoform X2 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Isoflavonoid biosynthesis (ko00943)"]
["c110068.graph_c0",22,1.14,10,0.31,6,0.17,41,1.83,45,2.49,55,2.47,0.000834147,1.487765706,"up","[DPM]","--","Molecular Function: copper ion binding (GO:0005507);; Cellular Component: extracellular region (GO:0005576);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K00423|8.6e-154|sind:105163722|K00423 L-ascorbate oxidase [EC:1.10.3.3] | (RefSeq) L-ascorbate oxidase","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase OS=Nicotiana tabacum OX=4097 GN=AAO PE=2 SV=1","L-ascorbate oxidase OS=Nyssa sinensis OX=561372 GN=F0562_001734 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","hypothetical protein F0562_001734 [Nyssa sinensis]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Ascorbate and aldarate metabolism (ko00053)"]
["c89994.graph_c1",25,0.63,58,1.39,34,0.89,0,0,0,0,0,0,1.6e-12,-5.669296366,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K17545|2.6e-132|zma:103634684|K17545 serine/threonine-protein kinase ULK4 [EC:2.7.11.1] | (RefSeq) uncharacterized protein LOC103634684","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22314 PE=4 SV=1","K","Transcription","hypothetical protein VITISV_029336 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c85494.graph_c0",6,0.37,7,0.41,3,0.19,42,2.65,34,2.46,25,1.57,6.08e-05,2.156651774,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c75051.graph_c0",0,0,0,0,2,0.09,19,1.29,23,2.04,43,2.52,3e-07,3.898042635,"up","[L]","Replication, recombination and repair ","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; ","K10260|1.0e-14|cre:CHLREDRAFT_205525|K10260 F-box and WD-40 domain protein 7 | (RefSeq) predicted protein","[S]","Function unknown ","U-box domain;; Armadillo/beta-catenin-like repeat","U-box domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUB9 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Davidia involucrata OX=16924 GN=Din_000508 PE=4 SV=1","S","Function unknown","U-box domain-containing protein 9-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ubiquitin mediated proteolysis (ko04120)"]
["c99640.graph_c0",18,0.65,24,0.82,14,0.52,109,4.04,78,3.31,143,5.3,1.24e-11,2.164542452,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: phosphoric diester hydrolase activity (GO:0008081);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana OX=3702 GN=At5g67130 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009053 PE=4 SV=1","S","Function unknown","PI-PLC X domain-containing protein At5g67130-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c69876.graph_c0",62,4.16,91,5.76,47,3.24,5,0.34,23,1.81,15,1.06,2.94e-09,-2.399064817,"down","[C]","Energy production and conversion ","Cellular Component: mitochondrial inner membrane (GO:0005743);; Molecular Function: ubiquinol-cytochrome-c reductase activity (GO:0008121);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: respiratory electron transport chain (GO:0022904);; Cellular Component: respiratory chain complex III (GO:0045275);; Molecular Function: metal ion binding (GO:0046872);; ","K00412|7.9e-91|ccp:ChcroMp07|K00412 ubiquinol-cytochrome c reductase cytochrome b subunit | (RefSeq) cob; apocytochrome b","[C]","Energy production and conversion ","--","Cytochrome b OS=Cyanidium caldarium OX=2771 GN=MT-CYB PE=3 SV=1","Cytochrome b OS=Ceramium japonicum OX=218448 GN=cob PE=3 SV=1","C","Energy production and conversion","apocytochrome b [Capsaspora owczarzaki]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488)","Oxidative phosphorylation (ko00190)"]
["c101464.graph_c2",499,28.38,484,25.84,432,24.13,2174,122.71,1609,104.2,2013,112.97,9.49e-80,1.704447926,"up","[C]","Energy production and conversion ","Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; ","K00627|5.8e-191|oeu:111405964|K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] | (RefSeq) dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic","[C]","Energy production and conversion ","2-oxoacid dehydrogenases acyltransferase (catalytic domain);; e3 binding domain;; Biotin-requiring enzyme","Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LTA2 PE=2 SV=1","Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Salvia miltiorrhiza OX=226208 GN=DHLAT2 PE=2 SV=1","C","Energy production and conversion","dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Glycolysis / Gluconeogenesis (ko00010);; Citrate cycle (TCA cycle) (ko00020);; Pyruvate metabolism (ko00620);; Carbon metabolism (ko01200)"]
["c96330.graph_c0",2,0.07,4,0.13,5,0.18,42,1.55,46,1.9,52,1.87,5.47e-09,3.067167441,"up","--","--","Molecular Function: nutrient reservoir activity (GO:0045735);; ","--","--","--","Cupin;; Cupin domain","--","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0034g01870 PE=3 SV=1","S","Function unknown","PREDICTED: glutelin type-A 3 isoform X1 [Vitis vinifera]","molecular function: nutrient reservoir activity (GO:0045735)","--"]
["c98901.graph_c0",108,3.67,137,4.35,106,3.72,10,0.33,17,0.68,14,0.49,1.55e-26,-3.319319739,"down","--","--","--","--","--","--","N-terminal C2 in EEIG1 and EHBP1 proteins","--","Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_28660 PE=4 SV=1","--","--","uncharacterized protein LOC111389586 [Olea europaea var. sylvestris]","--","--"]
["c108606.graph_c1",13,0.41,29,0.96,19,0.75,76,4.54,75,3.71,85,4.94,2.41e-06,1.583641427,"up","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","K07375|1.2e-45|cpap:110811257|K07375 tubulin beta | (RefSeq) tubulin beta-3 chain-like","[Z]","Cytoskeleton ","Tubulin/FtsZ family, GTPase domain;; Tubulin/FtsZ family, GTPase domain;; Tubulin C-terminal domain","Tubulin beta-1 chain (Fragment) OS=Avena sativa OX=4498 GN=TUBB1 PE=2 SV=1","Tubulin beta chain OS=Carpinus fangiana OX=176857 GN=FH972_017274 PE=3 SV=1","Z","Cytoskeleton","hypothetical protein FH972_017274 [Carpinus fangiana]","molecular function: catalytic activity (GO:0003824);; molecular function: structural molecule activity (GO:0005198);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080)","Phagosome (ko04145)"]
["c99201.graph_c0",17,0.5,22,0.62,20,0.61,7,0.21,9,0.31,10,0.3,0.009696737,-1.388384945,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","[L]","Replication, recombination and repair ","hAT family C-terminal dimerisation region;; Domain of unknown function (DUF4413)","--","Zinc finger BED domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33180 PE=4 SV=1","L","Replication, recombination and repair","zinc finger BED domain-containing protein RICESLEEPER 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c109922.graph_c1",426,11.18,538,13.06,474,12.71,113,2.74,109,3.11,97,2.3,3.57e-65,-2.476356058,"down","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K03319|1.4e-274|oeu:111397072|K03319 divalent anion:Na+ symporter, DASS family | (RefSeq) dicarboxylate transporter 2.1, chloroplastic-like isoform X1","--","--","Sodium:sulfate symporter transmembrane region;; Citrate transporter","Dicarboxylate transporter 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=DIT2 PE=1 SV=1","Dicarboxylate transporter 2.1, chloroplastic-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_12089 PE=3 SV=1","P","Inorganic ion transport and metabolism","dicarboxylate transporter 2.1, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c104712.graph_c0",24,1.03,16,0.65,25,1.23,96,5.47,143,7.77,115,5.82,2.49e-11,2.072594692,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K13260|6.8e-176|oeu:111367220|K13260 isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] | (RefSeq) cytochrome P450 81E8-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450","Cytochrome P450 81Q32 OS=Catharanthus roseus OX=4058 GN=CYP81Q32 PE=2 SV=1","Cytochrome P450 CYP2 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10217 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 81E8-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Isoflavonoid biosynthesis (ko00943)"]
["c112782.graph_c1",304,10.14,311,10.73,243,8.13,148,6.52,101,5.93,112,5.62,6.02e-21,-1.557752782,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13418|4.7e-06|smo:SELMODRAFT_172211|K13418 somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) hypothetical protein","--","--","Leucine rich repeat N-terminal domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1","Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_012157 PE=4 SV=1","T","Signal transduction mechanisms","protein MALE DISCOVERER 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c113765.graph_c0",58,2.3,46,1.45,42,2.93,321,10.13,264,10.13,231,7.9,8.94e-24,2.138837277,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K01534|3.6e-83|var:108330779|K01534 Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] | (RefSeq) cadmium/zinc-transporting ATPase HMA3-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana OX=3702 GN=At5g57670 PE=2 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00041441001 PE=3 SV=1","T","Signal transduction mechanisms","probable receptor-like serine/threonine-protein kinase At5g57670 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c116026.graph_c0",2,0.06,4,0.11,1,0.03,111,3.89,77,2.4,98,2.91,1.43e-18,4.583654793,"up","--","--","--","--","--","--","--","--","JmjC domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_025562 PE=4 SV=1","--","--","uncharacterized protein LOC111391006 [Olea europaea var. sylvestris]","--","--"]
["c95345.graph_c2",118,3.99,149,4.83,148,5.43,0,0,1,0.05,5,0.2,4.9e-31,-5.872768775,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|3.3e-150|sind:105174545|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.5 isoform X1","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 5.5 OS=Arabidopsis thaliana OX=3702 GN=NPF5.5 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023378001 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 5.5-like [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c109088.graph_c0",214,20.29,298,26.2,218,19.89,55,5.22,54,6.3,51,5.35,4.06e-36,-2.478743656,"down","--","--","Cellular Component: lytic vacuole (GO:0000323);; Biological Process: immune system process (GO:0002376);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: endopeptidase activity (GO:0004175);; Molecular Function: cysteine-type endopeptidase activity (GO:0004197);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: extracellular space (GO:0005615);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: lysosome (GO:0005764);; Cellular Component: vacuole (GO:0005773);; Biological Process: proteolysis (GO:0006508);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: immune response (GO:0006955);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: cellular process (GO:0009987);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete extracellular region part (GO:0044421);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Molecular Function: peptidase activity, acting on L-amino acid peptides (GO:0070011);; Biological Process: organic substance metabolic process (GO:0071704);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; ","K01366|6.3e-43|oeu:111368619|K01366 cathepsin H [EC:3.4.22.16] | (RefSeq) cysteine proteinase 3-like","[O]","Posttranslational modification, protein turnover, chaperones ","Cathepsin propeptide inhibitor domain (I29);; Papain family cysteine protease","Cysteine proteinase 3 OS=Solanum lycopersicum OX=4081 GN=CYP-3 PE=2 SV=1","Cysteine proteinase 2 OS=Morella rubra OX=262757 GN=CJ030_MR5G024479 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","cysteine proteinase 3-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: immune system process (GO:0002376);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987)","--"]
["c80317.graph_c0",399,59.66,448,62.88,407,62.26,52,7.96,80,14.05,64,9.73,5.58e-71,-2.971044066,"down","--","--","--","--","--","--","--","--","uncharacterized protein LOC104228562 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104228562 PE=4 SV=1","--","--","PREDICTED: uncharacterized protein LOC104228562 isoform X1 [Nicotiana sylvestris]","--","--"]
["c107435.graph_c0",28,2.34,23,1.75,31,2.02,101,5.58,73,4.88,106,5.24,2.45e-06,1.403650496,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09874|2.1e-131|sind:105165797|K09874 aquaporin NIP | (RefSeq) probable aquaporin NIP5-1","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Probable aquaporin NIP5-1 OS=Arabidopsis thaliana OX=3702 GN=NIP5-1 PE=2 SV=1","Aquaporin (Major intrinsic protein family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07288 PE=3 SV=1","G","Carbohydrate transport and metabolism","Aquaporin (major intrinsic protein family) [Handroanthus impetiginosus]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116337.graph_c1",309,7.24,359,7.97,305,7.35,871,20.05,758,20.02,814,18.64,1.03e-22,1.004569159,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: ATP-dependent peptidase activity (GO:0004176);; Molecular Function: serine-type endopeptidase activity (GO:0004252);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrial matrix (GO:0005759);; Biological Process: protein quality control for misfolded or incompletely synthesized proteins (GO:0006515);; Biological Process: mitochondrion organization (GO:0007005);; Biological Process: cellular response to oxidative stress (GO:0034599);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: chaperone-mediated protein complex assembly (GO:0051131);; Biological Process: oxidation-dependent protein catabolic process (GO:0070407);; ","K08675|0.0e+00|oeu:111390212|K08675 ATP-dependent Lon protease [EC:3.4.21.53] | (RefSeq) LOW QUALITY PROTEIN: lon protease homolog 1, mitochondrial-like","[O]","Posttranslational modification, protein turnover, chaperones ","Lon protease (S16) C-terminal proteolytic domain;; ATPase family associated with various cellular activities (AAA);; ATP-dependent protease La (LON) substrate-binding domain;; Holliday junction DNA helicase RuvB P-loop domain;; AAA domain (dynein-related subfamily);; AAA domain (Cdc48 subfamily);; PrkA AAA domain","Lon protease homolog, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27415 PE=2 SV=1","Lon protease homolog, mitochondrial OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000877mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","LOW QUALITY PROTEIN: lon protease homolog 1, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: response to stimulus (GO:0050896)","--"]
["c93884.graph_c0",16,1.42,15,1.38,17,1.79,41,2.47,54,4.45,52,3.49,0.001542142,1.242588134,"up","[R]","General function prediction only ","Biological Process: lipid catabolic process (GO:0016042);; Molecular Function: hydrolase activity (GO:0016787);; ","--","[I]","Lipid transport and metabolism ","Patatin-like phospholipase","Patatin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=PLP6 PE=1 SV=1","Patatin OS=Nicotiana tabacum OX=4097 GN=LOC107773086 PE=3 SV=1","I","Lipid transport and metabolism","PREDICTED: patatin-like protein 3 [Nicotiana tabacum]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c107707.graph_c0",41,5.08,63,6.4,28,2.89,13,1.36,11,1.67,6,0.61,2.73e-07,-2.301379297,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111395226 [Olea europaea var. sylvestris]","--","--"]
["c90429.graph_c0",28,1.54,27,1.43,20,1.08,10,0.61,11,0.75,13,0.77,0.004294918,-1.371877299,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114775.graph_c1",17,1.06,18,0.92,26,1.37,88,2.82,88,4.31,121,6.01,1.5e-09,1.897959809,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13420|3.8e-32|sind:105162157|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) probable LRR receptor-like serine/threonine-protein kinase At3g47570","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00033425001 PE=3 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c117947.graph_c0",1237,7.97,1142,7,1032,6.91,517,3.43,480,3.71,502,3.36,6.22e-65,-1.503714234,"down","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K16732|4.4e-132|sind:105160166|K16732 protein regulator of cytokinesis 1 | (RefSeq) 65-kDa microtubule-associated protein 6-like","[DZ]","--","Microtubule associated protein (MAP65/ASE1 family);; Protein of unknown function (DUF 659);; hAT family C-terminal dimerisation region;; Microtubule associated protein (MAP65/ASE1 family)","65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=MAP65-6 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_023134 PE=4 SV=1","--","--","COP1-interactive protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117265.graph_c1",5,0.16,8,0.22,7,0.16,137,4.7,134,4.58,132,4.08,1.01e-24,3.848114971,"up","--","--","--","--","--","--","Domain of unknown function (DUF4378);; DUF761-associated sequence motif","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034885 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111371323 [Olea europaea var. sylvestris]","--","--"]
["c94522.graph_c0",405,39.18,121,7.91,122,10.91,105,9.6,50,5.73,80,6.24,0.009204326,-1.608466514,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|7.0e-76|gab:108480998|K20628 expansin | (RefSeq) expansin-A5","--","--","Expansin C-terminal domain;; Lytic transglycolase","Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1","Expansin OS=Dorcoceras hygrometricum OX=472368 GN=F511_03261 PE=3 SV=1","S","Function unknown","expansin-A11-like isoform X1 [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c111745.graph_c1",153,5.93,167,6.25,139,5.81,31,1.21,49,2.31,68,2.76,5.7e-16,-1.927069863,"down","--","--","--","--","--","--","CBS domain","CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana OX=3702 GN=CBSX5 PE=2 SV=2","Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_04800 PE=4 SV=1","S","Function unknown","CBS domain-containing protein CBSX5-like [Olea europaea var. sylvestris]","--","--"]
["c107520.graph_c0",676,20.91,701,20.29,593,19.02,4566,144.36,4048,146.81,4787,152,0,2.440234137,"up","--","--","Molecular Function: transcription coregulator activity (GO:0003712);; Cellular Component: nucleus (GO:0005634);; ","K14494|0.0e+00|oeu:111367486|K14494 DELLA protein | (RefSeq) DELLA protein GAI-like","--","--","GRAS domain family;; Transcriptional regulator DELLA protein N terminal","DELLA protein GAI OS=Solanum lycopersicum OX=4081 GN=GAI PE=2 SV=1","GRAS family transcription factor family protein OS=Fraxinus mandshurica OX=56029 GN=GAI PE=2 SV=1","K","Transcription","DELLA protein GAI-like [Olea europaea var. sylvestris]","molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Plant hormone signal transduction (ko04075)"]
["c98000.graph_c0",10,0.85,5,0.4,4,0.35,47,4.1,53,5.35,77,6.67,3.24e-09,2.716125755,"up","--","--","--","--","--","--","--","--","G protein-regulated inducer of neurite outgrowth 1 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc29977 PE=4 SV=1","--","--","uncharacterized protein LOC111396778 [Olea europaea var. sylvestris]","--","--"]
["c107719.graph_c2",97,4.39,124,5.31,98,4.59,1,0.05,1,0.06,0,0,1.01e-23,-6.331658787,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101463.graph_c0",666,30.01,772,30.8,687,31.05,332,14.65,247,14.98,226,12.38,1.15e-40,-1.711478073,"down","--","--","Molecular Function: cyclin-dependent protein serine/threonine kinase activity (GO:0004693);; Molecular Function: ATP binding (GO:0005524);; ","--","--","--","--","--","Cyclin-dependent kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03763 PE=4 SV=1","--","--","uncharacterized protein LOC111405693 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c90578.graph_c0",11,0.64,0,0,2,0.12,38,2.29,48,3.32,76,4.56,0.007505017,2.383037138,"up","[IQR]","--","Molecular Function: oxidoreductase activity (GO:0016491);; ","K11147|4.3e-29|tcc:18597252|K11147 dehydrogenase/reductase SDR family member 4 [EC:1.1.-.-] | (RefSeq) tropinone reductase-like 3","[R]","General function prediction only ","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","NADPH-dependent aldehyde reductase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ChlADR1 PE=1 SV=1","Reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26012 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","NADPH-dependent aldehyde reductase 1, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Peroxisome (ko04146)"]
["c95985.graph_c1",16,1.83,17,1.58,15,1.66,106,12.19,117,13.38,116,12.48,4.09e-15,2.434807855,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12937 PE=4 SV=1","--","--","mucin-5AC-like [Olea europaea var. sylvestris]","--","--"]
["c91392.graph_c0",0,0,3,0.12,2,0.09,357,16.04,476,24.38,516,23.02,5.69e-45,7.047500475,"up","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; ","K19891|1.9e-69|eus:EUTSA_v10004013mg|K19891 glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39] | (RefSeq) hypothetical protein","--","--","Glycosyl hydrolases family 17","Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana OX=3702 GN=At1g32860 PE=2 SV=1","Glucan endo-1,3-beta-D-glucosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03080 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-glucosidase 11-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c111044.graph_c0",31,0.6,29,0.5,26,0.53,292,6.81,258,7.13,338,8.55,1e-43,3.001455216,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20718|4.2e-242|oeu:111405573|K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERL1 isoform X1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine Rich repeat;; Leucine rich repeat N-terminal domain","LRR receptor-like serine/threonine-protein kinase SIK1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIK1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15585 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase ERL2 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016)"]
["c114490.graph_c0",101,2.53,100,2.78,101,2.48,257,5.92,235,7.18,274,6.96,1.31e-09,1.010474481,"up","[NW]","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13416|1.2e-44|cam:101506449|K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Nodulation receptor kinase OS=Pisum sativum OX=3888 GN=NORK PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03051 PE=3 SV=1","T","Signal transduction mechanisms","probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c114829.graph_c0",2574,55.91,2615,52.86,2387,53.71,763,12.95,840,15.8,920,15.3,2.81e-155,-1.904984868,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);; Biological Process: sucrose catabolic process (GO:0005987);; Molecular Function: glycopeptide alpha-N-acetylgalactosaminidase activity (GO:0033926);; ","K04125|8.4e-165|oeu:111376817|K04125 gibberellin 2beta-dioxygenase [EC:1.14.11.13] | (RefSeq) gibberellin 2-beta-dioxygenase 2-like","--","--","Alkaline and neutral invertase;; non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily;; Alkaline and neutral invertase;; Alkaline and neutral invertase","Alkaline/neutral invertase C, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=INVC PE=1 SV=1","Alkaline/neutral invertase OS=Nyssa sinensis OX=561372 GN=F0562_034947 PE=3 SV=1","S","Function unknown","alkaline/neutral invertase A, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Diterpenoid biosynthesis (ko00904)"]
["c104968.graph_c0",155,5.09,163,4.99,170,5.75,1017,37.02,841,34.36,962,35.29,1.59e-83,2.197847669,"up","[L]","Replication, recombination and repair ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; ","K17679|3.1e-213|pda:103708331|K17679 ATP-dependent RNA helicase MSS116, mitochondrial [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 31-like","[A]","RNA processing and modification ","DEAD/DEAH box helicase;; Helicase conserved C-terminal domain;; Type III restriction enzyme, res subunit","DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 PE=2 SV=2","Dead box ATP-dependent RNA helicase OS=Striga asiatica OX=4170 GN=STAS_25835 PE=4 SV=1","A","RNA processing and modification","DEAD-box ATP-dependent RNA helicase 31 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c115748.graph_c0",5,1.19,1,0.22,1,0.24,120,3.37,102,3.13,141,3.88,2.66e-22,4.916240616,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K01537|1.2e-16|oeu:111398112|K01537 P-type Ca2+ transporter type 2C [EC:7.2.2.10] | (RefSeq) calcium-transporting ATPase 12, plasma membrane-type-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca013638 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111409515 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c107396.graph_c2",46,4.85,39,3.87,42,4.54,0,0,0,0,0,0,1.74e-13,-5.824766834,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c69188.graph_c0",0,0,0,0,0,0,41,5.43,51,7.65,53,6.88,1.3e-11,5.461295916,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111375742 [Olea europaea var. sylvestris]","--","--"]
["c114332.graph_c1",20,0.98,48,2.24,35,2.07,8,0.33,10,0.45,11,0.4,2.16e-05,-2.012432511,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117198.graph_c0",328,4.99,345,6.56,326,7.03,1137,27.76,1117,28.63,1333,28.67,1.48e-61,1.516268247,"up","[DZ]","--","Molecular Function: metal ion binding (GO:0046872);; ","K10615|8.5e-48|ppp:112282946|K10615 E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26] | (RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1","--","--","Regulator of chromosome condensation (RCC1) repeat;; Transcription factor regulating root and shoot growth via Pin3;; Regulator of chromosome condensation (RCC1) repeat;; Transcription factor BRX N-terminal domain;; FYVE zinc finger;; Pleckstrin homology domain","PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRAF1 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027544 PE=4 SV=1","--","--","PH, RCC1 and FYVE domains-containing protein 1-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Ubiquitin mediated proteolysis (ko04120)"]
["c87140.graph_c0",1,0.23,0,0,0,0,92,21.58,81,22.02,94,22.38,1.18e-16,5.840552077,"up","--","--","Cellular Component: plasmodesma (GO:0009506);; Biological Process: calcium-mediated signaling (GO:0019722);; ","--","--","--","Rapid ALkalinization Factor (RALF)","Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1","Putative rapid ALkalinization Factor OS=Medicago truncatula OX=3880 GN=11409897 PE=2 SV=1","S","Function unknown","protein RALF-like 34 [Hevea brasiliensis]","cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c39364.graph_c0",333,12.53,363,12.92,361,13.99,236,9.12,172,7.58,243,9.3,6.07e-14,-1.023722424,"down","[J]","Translation, ribosomal structure and biogenesis ","--","--","--","--","Polyketide cyclase / dehydrase and lipid transport","--","Polyketide_cyc domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_10084 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111389794 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c92009.graph_c0",45,1.6,31,1.58,23,0.91,6,0.5,9,0.86,15,1.24,5.65e-05,-1.919929954,"down","--","--","--","K18328|2.1e-06|atr:18442444|K18328 lariat debranching enzyme [EC:3.1.-.-] | (RefSeq) lariat debranching enzyme isoform X2","--","--","--","--","--","--","--","--","--","--"]
["c118008.graph_c0",398,8.11,476,9.47,389,7.43,221,5.24,209,5.06,271,6.35,1.39e-20,-1.168169077,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; ","K12472|2.9e-14|oeu:111380811|K12472 epidermal growth factor receptor substrate 15 | (RefSeq) epidermal growth factor receptor substrate 15-like 1","[TU]","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_29201 PE=4 SV=1","--","--","epidermal growth factor receptor substrate 15-like 1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Endocytosis (ko04144)"]
["c75119.graph_c0",36,12.56,58,18.76,61,21.51,23,8.56,30,12.36,39,13.81,0.003058361,-1.046288021,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Molecular Function: potassium:proton antiporter activity (GO:0015386);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","K(+) efflux antiporter 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KEA2 PE=1 SV=2","RCK N-terminal domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000390mg PE=4 SV=1","P","Inorganic ion transport and metabolism","K(+) efflux antiporter 2, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99279.graph_c0",47,1.97,52,2.03,68,2.86,1179,50.35,1130,55.6,1220,52.07,1.07e-176,4.054365292,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (GO:0004365);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to cold (GO:0009409);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Cellular Component: plastid stroma (GO:0009532);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to sucrose (GO:0009744);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: stromule (GO:0010319);; Biological Process: carbon fixation (GO:0015977);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (GO:0016620);; Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors (GO:0016903);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; Biological Process: photosynthesis, dark reaction (GO:0019685);; Molecular Function: enzyme binding (GO:0019899);; Molecular Function: kinase binding (GO:0019900);; Molecular Function: protein domain specific binding (GO:0019904);; Biological Process: cellular component assembly (GO:0022607);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: chloroplast membrane (GO:0031969);; Cellular Component: envelope (GO:0031975);; Cellular Component: plastid thylakoid (GO:0031976);; Cellular Component: organelle subcompartment (GO:0031984);; Biological Process: response to disaccharide (GO:0034285);; Cellular Component: photosynthetic membrane (GO:0034357);; Molecular Function: small molecule binding (GO:0036094);; Cellular Component: plastid membrane (GO:0042170);; Biological Process: response to chemical (GO:0042221);; Cellular Component: thylakoid membrane (GO:0042651);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity (GO:0043891);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete thylakoid part (GO:0044436);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: protein dimerization activity (GO:0046983);; Molecular Function: obsolete cofactor binding (GO:0048037);; Cellular Component: apoplast (GO:0048046);; Molecular Function: NADP binding (GO:0050661);; Molecular Function: obsolete coenzyme binding (GO:0050662);; Biological Process: response to stimulus (GO:0050896);; Biological Process: protein complex oligomerization (GO:0051259);; Biological Process: protein homooligomerization (GO:0051260);; Biological Process: protein tetramerization (GO:0051262);; Molecular Function: NAD binding (GO:0051287);; Biological Process: protein homotetramerization (GO:0051289);; Cellular Component: plastid thylakoid membrane (GO:0055035);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: protein-containing complex assembly (GO:0065003);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: disordered domain specific binding (GO:0097718);; Cellular Component: supramolecular complex (GO:0099080);; Molecular Function: nucleoside phosphate binding (GO:1901265);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K05298|1.9e-134|sind:105156113|K05298 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13] | (RefSeq) glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic","[G]","Carbohydrate transport and metabolism ","Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain","Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GAPA1 PE=1 SV=3","Glyceraldehyde-3-phosphate dehydrogenase OS=Lupinus albus OX=3870 GN=Lal_00021284 PE=3 SV=1","G","Carbohydrate transport and metabolism","glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: supramolecular complex (GO:0099080)","Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c103877.graph_c1",43,5.62,50,6.04,50,7.52,1,0.16,3,0.42,10,1.23,4.78e-12,-3.420406358,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108298.graph_c0",93,5.97,82,5.27,111,7.34,66,3.61,32,2.05,56,3.02,1.25e-05,-1.207547803,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Sulfotransferase domain","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_007657 PE=4 SV=1","I","Lipid transport and metabolism","uncharacterized protein LOC111367867 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c80908.graph_c0",4,0.25,1,0.06,5,0.32,25,1.6,19,1.39,26,1.66,0.000537253,2.179157062,"up","[S]","Function unknown ","Cellular Component: integral component of membrane (GO:0016021);; ","K22736|1.5e-07|obr:102720070|K22736 vacuolar iron transporter family protein | (RefSeq) vacuolar iron transporter homolog 3-like","--","--","Protein of unknown function, DUF599","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_003129 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105158014 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94458.graph_c0",4,0.5,7,0.95,10,1.31,57,7.14,36,5.06,45,5.71,2.46e-06,2.233098779,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03336 PE=4 SV=1","--","--","uncharacterized protein LOC111408068 [Olea europaea var. sylvestris]","--","--"]
["c106244.graph_c0",21,1.51,18,1.28,27,2.4,70,3.66,57,3.68,70,3.2,0.000394868,1.208407474,"up","--","--","--","--","--","--","Aluminium induced protein;; Glutamine amidotransferase domain;; Aluminium induced protein","Stem-specific protein TSJT1 OS=Nicotiana tabacum OX=4097 GN=TSJT1 PE=2 SV=1","DUF3700 domain-containing protein OS=Papaver somniferum OX=3469 GN=C5167_017370 PE=4 SV=1","S","Function unknown","stem-specific protein TSJT1-like isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c89446.graph_c0",58,6.46,57,5.91,64,7.21,177,19.92,152,19.6,197,22.11,6.61e-09,1.211896092,"up","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; ","K07904|4.4e-69|sind:105165421|K07904 Ras-related protein Rab-11A | (RefSeq) ras-related protein Rab11B","[U]","Intracellular trafficking, secretion, and vesicular transport ","Ras family;; Ras of Complex, Roc, domain of DAPkinase;; ADP-ribosylation factor family","Ras-related protein RABA1f OS=Arabidopsis thaliana OX=3702 GN=RABA1F PE=2 SV=1","GTPase Rab11/YPT3, small G protein superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06443 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","GTPase Rab11/YPT3, small G protein superfamily [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Endocytosis (ko04144)"]
["c117924.graph_c0",41,2.05,34,2.22,43,2.74,116,3.15,98,3.5,119,3.19,9.77e-06,1.147409957,"up","--","--","--","K03327|2.7e-59|oeu:111370159|K03327 multidrug resistance protein, MATE family | (RefSeq) LOW QUALITY PROTEIN: ethionine resistance-conferring protein 1-like","--","--","Retrotransposon gag protein","--","uncharacterized protein LOC104590568 OS=Nelumbo nucifera OX=4432 GN=LOC104590568 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111409414 [Olea europaea var. sylvestris]","--","--"]
["c113410.graph_c0",15,0.47,33,0.9,12,0.38,266,7.67,341,12.09,394,11.87,1.37e-45,3.673404413,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K15333|9.3e-49|nsy:104224633|K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) uncharacterized protein LOC104224633","--","--","Subtilase family;; Peptidase inhibitor I9;; PA domain;; Fibronectin type-III domain;; Subtilase family","Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana OX=3702 GN=SBT1.8 PE=1 SV=1","Cucumisin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24057 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","subtilisin-like protease SBT1.8 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c103338.graph_c0",2057,80.79,2419,90.49,2110,87.15,148,6.02,149,6.74,139,5.55,0,-4.225292199,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K14207|6.1e-55|thj:104823877|K14207 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2 | (RefSeq) probable sodium-coupled neutral amino acid transporter 6","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein;; Tryptophan/tyrosine permease family;; Transmembrane amino acid transporter protein","Amino acid transporter AVT6C OS=Arabidopsis thaliana OX=3702 GN=AVT6C PE=2 SV=1","Amino acid transporter protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14033 PE=4 SV=1","E","Amino acid transport and metabolism","Amino acid transporter protein [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107690.graph_c0",38,1.83,33,1.51,27,1.34,12,0.59,7,0.4,5,0.25,4.96e-06,-2.194210501,"down","--","--","--","K21249|9.3e-07|oeu:111374258|K21249 UV radiation resistance-associated gene protein | (RefSeq) uncharacterized protein LOC111374258","--","--","--","--","--","--","--","--","--","--"]
["c98233.graph_c0",116,3.83,96,3.14,98,3.54,918,30.86,874,33.32,1099,36.99,7.75e-116,2.881953595,"up","--","--","Biological Process: cell morphogenesis (GO:0000902);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: structural molecule activity (GO:0005198);; Molecular Function: structural constituent of cell wall (GO:0005199);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: tissue development (GO:0009888);; Biological Process: cellular process (GO:0009987);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: root system development (GO:0022622);; Cellular Component: cell junction (GO:0030054);; Biological Process: cell differentiation (GO:0030154);; Cellular Component: external encapsulating structure (GO:0030312);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: growth (GO:0040007);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: root development (GO:0048364);; Biological Process: cell development (GO:0048468);; Biological Process: developmental growth (GO:0048589);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Cellular Component: symplast (GO:0055044);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Biological Process: plant epidermis development (GO:0090558);; Biological Process: plant epidermal cell differentiation (GO:0090627);; Biological Process: plant organ development (GO:0099402);; Biological Process: plant organ morphogenesis (GO:1905392);; ","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich repeat","Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1","Leucine-rich repeat extensin-like protein 2 OS=Nicotiana attenuata OX=49451 GN=LRX2 PE=4 SV=1","S","Function unknown","leucine-rich repeat extensin-like protein 6 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: multicellular organismal process (GO:0032501);; cellular component: symplast (GO:0055044);; biological process: growth (GO:0040007)","--"]
["c117279.graph_c0",11,0.63,7,0.38,6,0.15,52,2.12,53,2.43,47,1.79,5.38e-07,2.218331686,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: integral component of membrane (GO:0016021);; ","K17604|3.2e-77|qsu:112025462|K17604 zinc finger SWIM domain-containing protein 3 | (RefSeq) protein FAR1-RELATED SEQUENCE 5-like","--","--","MULE transposase domain;; SWIM zinc finger;; FAR1 DNA-binding domain","Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1","Protein FAR1-RELATED SEQUENCE OS=Dorcoceras hygrometricum OX=472368 GN=F511_44280 PE=3 SV=1","S","Function unknown","protein FAR-RED IMPAIRED RESPONSE 1-like [Dorcoceras hygrometricum]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110051.graph_c0",23,0.79,25,0.81,25,0.88,5,0.17,7,0.29,13,0.45,0.00074288,-1.741583131,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108038.graph_c0",10653,231.93,12112,249.58,11211,251.76,38759,866.8,30706,787.44,36072,805.02,1.24e-108,1.308898548,"up","--","--","Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Molecular Function: metal ion binding (GO:0046872);; ","K00454|4.5e-252|oeu:111393284|K00454 lipoxygenase [EC:1.13.11.12] | (RefSeq) linoleate 13S-lipoxygenase 2-1, chloroplastic-like","--","--","Lipoxygenase;; PLAT/LH2 domain;; Lipoxygenase","Lipoxygenase 2, chloroplastic OS=Tanacetum cinerariifolium OX=118510 GN=LOX2 PE=2 SV=1","Lipoxygenase OS=Olea europaea OX=4146 GN=lox2 PE=2 SV=1","E","Amino acid transport and metabolism","lipoxygenase 2 [Olea europaea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Linoleic acid metabolism (ko00591);; alpha-Linolenic acid metabolism (ko00592)"]
["c101191.graph_c0",437,24.24,485,25.41,400,22.83,31,1.76,10,0.65,6,0.34,4.48e-16,-4.623151516,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07646 PE=4 SV=1","--","--","hypothetical protein CDL12_07646 [Handroanthus impetiginosus]","--","--"]
["c106234.graph_c0",3,0.19,8,0.59,4,0.32,28,2.24,30,2.69,49,3.85,2.05e-05,2.297440371,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: brassinosteroid mediated signaling pathway (GO:0009742);; ","K11592|2.6e-07|oeu:111384491|K11592 endoribonuclease Dicer [EC:3.1.26.-] | (RefSeq) endoribonuclease Dicer homolog 2 isoform X1","--","--","BES1/BZR1 plant transcription factor, N-terminal","BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana OX=3702 GN=BEH4 PE=1 SV=1","BES1/BZR1-like protein 4 OS=Vitis vinifera OX=29760 GN=BEH4_0 PE=3 SV=1","S","Function unknown","BES1/BZR1 homolog protein 4-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","--"]
["c102107.graph_c0",1507,82.05,1575,81.21,1502,84.2,762,40.56,665,40.51,787,41.75,5.63e-81,-1.372750711,"down","--","--","Molecular Function: small molecule binding (GO:0036094);; ","--","[M]","Cell wall/membrane/envelope biogenesis ","Lipocalin / cytosolic fatty-acid binding protein family;; Lipocalin-like domain","Chloroplastic lipocalin OS=Arabidopsis thaliana OX=3702 GN=CHL PE=1 SV=1","Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_15G074100 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","chloroplastic lipocalin [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117127.graph_c0",22,0.58,16,0.37,18,0.45,94,3.01,110,5.06,150,5.52,2.17e-13,2.269472681,"up","[E]","Amino acid transport and metabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; ","K13366|5.4e-221|oeu:111407809|K13366 polyamine oxidase [EC:1.5.3.14 1.5.3.16 1.5.3.-] | (RefSeq) polyamine oxidase 1-like isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Flavin containing amine oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD dependent oxidoreductase;; FAD binding domain;; FAD binding domain;; Flavin containing amine oxidoreductase","Polyamine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=PAO1 PE=1 SV=1","Polyamine oxidase 1 OS=Nicotiana attenuata OX=49451 GN=PAO1 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","polyamine oxidase 1-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Arginine and proline metabolism (ko00330);; beta-Alanine metabolism (ko00410)"]
["c102082.graph_c0",13,0.5,3,0.11,5,0.2,55,2.17,82,3.65,92,3.6,2.18e-11,2.948864721,"up","--","--","Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xylogalacturonan beta-1,3-xylosyltransferase activity (GO:0102983);; ","K20889|1.1e-246|oeu:111372502|K20889 probable glucuronoxylan glucuronosyltransferase IRX7 [EC:2.4.1.-] | (RefSeq) probable glucuronoxylan glucuronosyltransferase IRX7","[GMW]","--","Exostosin family;; Exostosin family","Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana OX=3702 GN=IRX7 PE=2 SV=1","Acetylglucosaminyltransferase EXT1/exostosin 1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25081 PE=3 SV=1","--","--","probable glucuronoxylan glucuronosyltransferase IRX7 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c96655.graph_c0",0,0,0,0,0,0,23,1.52,41,3.03,30,1.88,6.38e-09,4.893562729,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: metal ion binding (GO:0046872);; Molecular Function: dioxygenase activity (GO:0051213);; ","K24028|7.3e-27|mtr:MTR_8g024120|K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-] | (RefSeq) 1-aminocyclopropane-1-carboxylate oxidase","[QR]","--","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana OX=3724 PE=2 SV=1","flavonol synthase/flavanone 3-hydroxylase-like OS=Nicotiana tabacum OX=4097 GN=LOC107800501 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","flavonol synthase/flavanone 3-hydroxylase-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c115490.graph_c0",605,34.32,698,35.14,648,39.58,204,13.79,225,17.78,271,18.42,2.62e-54,-1.796267962,"down","[C]","Energy production and conversion ","Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: ATP synthesis coupled electron transport (GO:0042773);; Molecular Function: quinone binding (GO:0048038);; ","K05575|1.8e-108|nau:109226728|K05575 NAD(P)H-quinone oxidoreductase subunit 4 [EC:7.1.1.2] | (RefSeq) uncharacterized protein LOC109226728","[C]","Energy production and conversion ","Fe-S metabolism associated domain;; Proton-conducting membrane transporter","NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhD PE=3 SV=1","NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Osmanthus fragrans OX=93977 GN=ndhD PE=3 SV=1","C","Energy production and conversion","sufE-like protein 2, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Oxidative phosphorylation (ko00190)"]
["c37610.graph_c1",0,0,0,0,0,0,24,2.69,14,1.8,23,2.56,8.91e-07,4.323170895,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; ","K11420|7.8e-58|sind:105171817|K11420 [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] | (RefSeq) histone-lysine N-methyltransferase family member SUVH9-like","--","--","SAD/SRA domain","Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana OX=3702 GN=SUVH9 PE=1 SV=1","Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22484 PE=4 SV=1","B","Chromatin structure and dynamics","histone-lysine N-methyltransferase family member SUVH9-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Lysine degradation (ko00310)"]
["c109488.graph_c0",1799,34.63,2095,37.97,1857,35.87,125,4.37,89,3.53,98,5.82,0,-4.511133096,"down","--","--","Biological Process: glutamine metabolic process (GO:0006541);; Molecular Function: hydrolase activity (GO:0016787);; ","K15227|2.0e-08|oeu:111389512|K15227 arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC111389512","--","--","--","Putative glutamine amidotransferase GAT1_2.1 OS=Arabidopsis thaliana OX=3702 GN=GAT1_2.1 PE=2 SV=1","Glutamine amidotransferase type-1 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_032702 PE=4 SV=1","F","Nucleotide transport and metabolism","uncharacterized protein LOC111400305 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c93829.graph_c0",3,0.09,6,0.18,1,0.03,44,3.03,32,1.91,30,1.99,1.5e-06,2.784112421,"up","--","--","Molecular Function: nutrient reservoir activity (GO:0045735);; ","--","--","--","Cupin;; Cupin;; Cupin","11S globulin seed storage protein Jug r 4 OS=Juglans regia OX=51240 PE=1 SV=1","Cupin type-1 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008983mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","11S globulin subunit beta-like [Olea europaea var. sylvestris]","molecular function: nutrient reservoir activity (GO:0045735)","--"]
["c102717.graph_c1",37,4.97,40,4.07,44,5.71,936,56.1,821,58.48,1016,59.17,1.99e-147,4.161323888,"up","--","--","--","K20890|2.0e-38|oeu:111370894|K20890 xylan alpha-glucuronosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glucuronate:xylan alpha-glucuronosyltransferase 1-like","[R]","General function prediction only ","Domain of unknown function","--","ANK_REP_REGION domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR2G000236 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111408312 [Olea europaea var. sylvestris]","--","--"]
["c96791.graph_c0",248,12.47,273,12.97,240,12.44,15,0.77,17,1,24,1.23,8.59e-62,-4.019875744,"down","--","--","--","--","--","--","Cotton fibre expressed protein","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_009584 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111377941 [Olea europaea var. sylvestris]","--","--"]
["c106435.graph_c0",46,3.26,65,4.47,73,5.67,119,4.83,138,9.94,213,8.78,8.47e-05,1.000664116,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: plant organ development (GO:0099402);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","CW-type Zinc Finger","B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0563300 PE=3 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_018433 PE=4 SV=1","K","Transcription","B3 domain-containing protein Os07g0563300-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)","--"]
["c103609.graph_c1",119,36.94,98,28.72,116,36.88,63,19.88,37,13.7,29,9.24,2.92e-09,-1.655542649,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92749.graph_c0",2,0.08,7,0.28,0,0,54,2.31,47,2.3,66,2.81,7.19e-11,3.540411018,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96078.graph_c0",43,6.4,59,8.24,68,10.35,28,4.35,26,4.6,21,3.27,2.36e-05,-1.454787006,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K08867|7.5e-19|oeu:111401673|K08867 WNK lysine deficient protein kinase [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase WNK3","--","--","--","--","Non-specific serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00878 PE=4 SV=1","--","--","probable serine/threonine-protein kinase WNK3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c79543.graph_c0",1855,266.27,2230,300.69,1981,291.1,849,124.85,817,137.76,800,116.76,6.16e-90,-1.614445861,"down","--","--","Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);; ","--","--","--","Aspartic acid proteinase inhibitor;; Cystatin domain","Cysteine proteinase inhibitor OS=Vigna unguiculata OX=3917 PE=1 SV=1","Cysteine proteinase inhibitor OS=Dorcoceras hygrometricum OX=472368 GN=F511_05733 PE=3 SV=1","G","Carbohydrate transport and metabolism","cysteine proteinase inhibitor-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c91730.graph_c1",4,0.09,0,0,0,0,56,1.27,88,2.3,86,1.94,3.13e-15,4.798580805,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication initiation (GO:0006270);; Cellular Component: MCM complex (GO:0042555);; ","K02542|0.0e+00|sind:105165582|K02542 DNA replication licensing factor MCM6 [EC:3.6.4.12] | (RefSeq) DNA replication licensing factor MCM6","[L]","Replication, recombination and repair ","MCM P-loop domain;; MCM OB domain;; MCM AAA-lid domain;; MCM6 C-terminal winged-helix domain;; MCM N-terminal domain;; Magnesium chelatase, subunit ChlI;; AAA domain (dynein-related subfamily)","DNA replication licensing factor MCM6 OS=Arabidopsis thaliana OX=3702 GN=MCM6 PE=1 SV=1","DNA helicase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22741 PE=3 SV=1","L","Replication, recombination and repair","DNA replication licensing factor MCM6 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: macromolecular complex (GO:0032991)","DNA replication (ko03030)"]
["c110928.graph_c0",1493,43.87,1574,44.02,1416,43.25,793,25.47,647,23.88,737,23.97,4.12e-72,-1.363034578,"down","[GER]","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","EamA-like transporter family","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17173 PE=3 SV=1","--","--","uncharacterized protein LOC111401417 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116300.graph_c0",40,1.77,50,1.83,46,1.82,203,6.98,251,10.49,278,9.23,1.37e-22,2.080669668,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102418.graph_c0",2328,108.8,2389,106.04,2327,112.42,362,17.74,304,16.62,408,19.41,0,-3.035330544,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; ","--","[V]","Defense mechanisms ","Lanthionine synthetase C-like protein","LanC-like protein GCL1 OS=Arabidopsis thaliana OX=3702 GN=GCL1 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036580001 PE=3 SV=1","V","Defense mechanisms","lanC-like protein GCL1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c90923.graph_c0",13,0.95,9,0.59,9,0.65,45,3.05,66,5.34,59,3.9,9.28e-07,2.037952717,"up","--","--","Biological Process: metal ion transport (GO:0030001);; Molecular Function: metal ion binding (GO:0046872);; ","--","[P]","Inorganic ion transport and metabolism ","Heavy-metal-associated domain;; Heavy-metal-associated domain","Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a020149mg PE=4 SV=1","P","Inorganic ion transport and metabolism","heavy metal-associated isoprenylated plant protein 3-like [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c115120.graph_c0",6,0.16,8,0.27,19,0.6,38,1.53,51,2.4,42,1.56,0.000802402,1.564673306,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","CCT motif;; B-box zinc finger","Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06944 PE=3 SV=1","K","Transcription","zinc finger protein CONSTANS-LIKE 10-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c116525.graph_c1",66,4.97,44,3.17,43,3.21,456,9.97,395,9.76,519,11.42,1.86e-56,2.810235347,"up","--","--","--","K14638|8.9e-34|han:110918990|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 4.6-like","[R]","General function prediction only ","Aspartyl protease","--","Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14818 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC102609448 [Citrus sinensis]","--","--"]
["c116980.graph_c0",14,0.3,12,0.16,12,0.17,74,2.81,76,1.32,89,1.43,2.32e-10,2.247590665,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Biological Process: DNA integration (GO:0015074);; ","K03006|3.5e-193|adu:107466525|K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; GAG-pre-integrase domain;; gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0453691 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","putative RNA-directed DNA polymerase [Rosa chinensis]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","RNA polymerase (ko03020)"]
["c115349.graph_c0",1130,37.03,1115,35.22,1112,37.92,4478,155.9,4043,161.19,4482,157.42,1.26e-161,1.628399102,"up","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_005167 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111374326 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c115289.graph_c1",305,57.21,350,56.88,344,66.97,111,14.13,84,9.81,108,10.82,2.24e-39,-2.03442841,"down","[V]","Defense mechanisms ","Biological Process: drug transmembrane transport (GO:0006855);; Molecular Function: antiporter activity (GO:0015297);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; Biological Process: transmembrane transport (GO:0055085);; ","K20456|3.0e-24|smo:SELMODRAFT_417928|K20456 oxysterol-binding protein 1 | (RefSeq) hypothetical protein","[R]","General function prediction only ","--","Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1","Polysacc_synt_C domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25735 PE=3 SV=1","V","Defense mechanisms","protein DETOXIFICATION 44, chloroplastic [Sesamum indicum]","biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101949.graph_c0",11,0.42,14,0.5,13,0.6,36,1.4,54,2.51,53,2.05,0.00027204,1.519858348,"up","--","--","Biological Process: ribosome biogenesis (GO:0042254);; ","K14771|1.6e-218|sind:105165583|K14771 U3 small nucleolar RNA-associated protein 19 | (RefSeq) nucleolar complex protein 4 homolog isoform X1","[J]","Translation, ribosomal structure and biogenesis ","CBF/Mak21 family","Protein NUCLEOLAR COMPLEX ASSOCIATED 4 OS=Arabidopsis thaliana OX=3702 GN=NOC4 PE=2 SV=1","Putative nucleolar protein involved in ribosome biogenesis OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11643 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","putative nucleolar protein involved in ribosome biogenesis [Handroanthus impetiginosus]","biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c104560.graph_c0",36,1.53,24,0.96,18,0.78,91,3.62,77,3.56,82,3.31,2.94e-05,1.324755488,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K13434|5.4e-20|jcu:105638678|K13434 pathogenesis-related genes transcriptional activator PTI6 | (RefSeq) pathogenesis-related genes transcriptional activator PTI6","--","--","AP2 domain","Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1","AP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09536 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor WIN1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Plant-pathogen interaction (ko04626)"]
["c89118.graph_c0",46,15.47,45,14.25,40,13.52,0,0,0,0,0,0,9.98e-14,-5.864728315,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110733.graph_c0",509,25.67,623,29.68,518,26.89,1556,80.11,1297,76.5,1418,72.66,8.74e-32,1.048978849,"up","[R]","General function prediction only ","--","--","--","--","Tetratricopeptide repeat","protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1","TPR_REGION domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_031352 PE=4 SV=1","S","Function unknown","protein SLOW GREEN 1, chloroplastic-like [Olea europaea var. sylvestris]","--","--"]
["c115884.graph_c0",127,3.59,150,3.9,123,3.49,1116,33.07,933,31.94,1178,34.46,1.4e-122,2.677298467,"up","--","--","Biological Process: proteolysis (GO:0006508);; Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","--","--","--","Ulp1 protease family, C-terminal catalytic domain","--","Ulp1 protease family protein OS=Striga asiatica OX=4170 GN=STAS_34156 PE=3 SV=1","--","--","uncharacterized protein LOC111409629 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","--"]
["c110015.graph_c0",991,16.26,1054,16.49,994,16.93,3866,66.01,3264,63.97,3727,63.41,2.91e-123,1.511345219,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: glycogen phosphorylase activity (GO:0008184);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Molecular Function: linear malto-oligosaccharide phosphorylase activity (GO:0102250);; Molecular Function: SHG alpha-glucan phosphorylase activity (GO:0102499);; ","K00688|0.0e+00|oeu:111396073|K00688 glycogen phosphorylase [EC:2.4.1.1] | (RefSeq) glycogen phosphorylase 1-like isoform X1","[G]","Carbohydrate transport and metabolism ","Carbohydrate phosphorylase;; Carbohydrate phosphorylase","Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum OX=4113 PE=1 SV=1","Alpha-1,4 glucan phosphorylase OS=Davidia involucrata OX=16924 GN=Din_047684 PE=3 SV=1","G","Carbohydrate transport and metabolism","glycogen phosphorylase 1-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Starch and sucrose metabolism (ko00500)"]
["c113662.graph_c0",7,2.03,4,1.08,14,4.11,56,16.61,52,17.72,50,14.88,1.06e-06,2.196344585,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: auxin-activated signaling pathway (GO:0009734);; ","--","--","--","--","--","Auxin response factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26853 PE=3 SV=1","--","--","--","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","--"]
["c77942.graph_c0",7,1.92,8,2.05,6,1.68,21,5.93,39,12.64,31,8.66,0.001577239,1.669042472,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113629.graph_c4",556,16.71,560,15.72,522,16.1,96,2.74,116,3.9,108,2.65,3.2e-87,-2.66213174,"down","[M]","Cell wall/membrane/envelope biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.4e-118|jcu:105633905|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 4.5-like isoform X1","[E]","Amino acid transport and metabolism ","POT family;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana OX=3702 GN=NPF4.3 PE=2 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_044298 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 4.3-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c106178.graph_c0",128,6.6,142,6.82,173,9.26,495,29.7,408,27.79,468,27.27,1.44e-18,1.294243841,"up","--","--","Molecular Function: ubiquitin protein ligase activity (GO:0061630);; ","K11982|9.3e-156|oeu:111378126|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) uncharacterized protein LOC111378126","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; zinc-ribbon;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; Anaphase-promoting complex subunit 11 RING-H2 finger","E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Salvia splendens OX=180675 GN=RNF115_126 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111378126 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c91675.graph_c0",15,1.09,4,0.27,9,0.67,27,2.01,61,5.2,32,2.37,0.001289248,1.665425846,"up","[E]","Amino acid transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09874|4.1e-134|oeu:111366463|K09874 aquaporin NIP | (RefSeq) probable aquaporin NIP-type","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Probable aquaporin NIP-type OS=Nicotiana alata OX=4087 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011367mg PE=3 SV=1","G","Carbohydrate transport and metabolism","probable aquaporin NIP-type [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108937.graph_c0",93,8.23,117,7.14,91,7.55,53,4.51,42,5.17,61,7.34,3.12e-07,-1.25314748,"down","--","--","Biological Process: DNA replication (GO:0006260);; Cellular Component: delta DNA polymerase complex (GO:0043625);; ","K03504|4.4e-20|oeu:111368878|K03504 DNA polymerase delta subunit 3 | (RefSeq) uncharacterized protein LOC111368878 isoform X1","--","--","--","--","DNA polymerase delta subunit 3 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01776 PE=4 SV=1","--","--","uncharacterized protein LOC111368878 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","DNA replication (ko03030);; Base excision repair (ko03410);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430);; Homologous recombination (ko03440)"]
["c115595.graph_c0",479,10.03,518,10.23,417,7.6,242,4.09,230,5.95,246,4.05,6.11e-28,-1.292329777,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; ","--","--","--","non-haem dioxygenase in morphine synthesis N-terminal","--","Fe2OG dioxygenase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_009508 PE=3 SV=1","S","Function unknown","hypothetical protein F0562_009508 [Nyssa sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c117165.graph_c0",89,2.69,99,2.51,72,2.22,218,8.25,225,9.8,239,8.59,5.14e-09,1.063829185,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: integral component of membrane (GO:0016021);; ","K01537|0.0e+00|oeu:111369008|K01537 P-type Ca2+ transporter type 2C [EC:7.2.2.10] | (RefSeq) calcium-transporting ATPase 12, plasma membrane-type-like","[P]","Inorganic ion transport and metabolism ","E1-E2 ATPase;; Cation transporting ATPase, C-terminus;; haloacid dehalogenase-like hydrolase;; Cation transport ATPase (P-type);; Cation transporter/ATPase, N-terminus","Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA12 PE=2 SV=1","Cation_ATPase_C domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00026220001 PE=4 SV=1","P","Inorganic ion transport and metabolism","calcium-transporting ATPase 12, plasma membrane-type-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110573.graph_c0",23,0.37,49,0.76,31,0.53,0,0,6,0.12,1,0.02,2.17e-09,-3.66567324,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","--","[TZ]","--","Armadillo/beta-catenin-like repeat;; Adaptin N terminal region;; HEAT repeats;; non-SMC mitotic condensation complex subunit 1;; HEAT repeat","--","--","S","Function unknown","armadillo segment polarity protein-like [Rhodamnia argentea]","molecular function: binding (GO:0005488)","--"]
["c41674.graph_c0",5,1.69,5,1.57,9,3.07,23,7.97,27,10.76,22,7.54,0.009677905,1.461670127,"up","[HR]","--","Molecular Function: catalytic activity (GO:0003824);; ","K08726|1.8e-10|jcu:105643456|K08726 soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76] | (RefSeq) uncharacterized protein LOC105643456","[I]","Lipid transport and metabolism ","--","--","Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_008457 PE=4 SV=1","I","Lipid transport and metabolism","uncharacterized protein LOC111388464 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Arachidonic acid metabolism (ko00590);; Peroxisome (ko04146)"]
["c104634.graph_c0",66,1.34,41,0.79,18,0.38,26,0.54,17,0.41,12,0.25,0.002305144,-1.405862964,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K13435|4.1e-100|spen:107018783|K13435 serine/threonine-protein kinase Pto | (RefSeq) receptor-like protein kinase HERK 1 isoform X2","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Malectin-like domain;; Malectin domain","Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana OX=3702 GN=At2g21480 PE=3 SV=1","Putative receptor-like protein kinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_22131 PE=4 SV=1","T","Signal transduction mechanisms","probable receptor-like protein kinase At2g21480 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c91965.graph_c0",14,3.62,12,2.9,28,7.55,92,24.44,61,18.91,82,21.59,2.13e-06,1.717989207,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","--","--","--","--","--","BZIP transcription factor OS=Solanum tuberosum OX=4113 GN=102591302 PE=4 SV=1","K","Transcription","bZIP transcription factor 11-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","--"]
["c118100.graph_c0",72,8.25,60,6.47,57,6.7,3,0.35,14,1.88,13,1.52,1.85e-12,-2.836119682,"down","[C]","Energy production and conversion ","Molecular Function: cytochrome-c oxidase activity (GO:0004129);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: mitochondrial envelope (GO:0005740);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: mitochondrial respirasome (GO:0005746);; Cellular Component: mitochondrial respiratory chain complex IV (GO:0005751);; Biological Process: generation of precursor metabolites and energy (GO:0006091);; Biological Process: oxidative phosphorylation (GO:0006119);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: purine nucleotide metabolic process (GO:0006163);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nucleoside phosphate metabolic process (GO:0006753);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: nucleoside monophosphate metabolic process (GO:0009123);; Biological Process: purine nucleoside monophosphate metabolic process (GO:0009126);; Biological Process: nucleoside triphosphate metabolic process (GO:0009141);; Biological Process: purine nucleoside triphosphate metabolic process (GO:0009144);; Biological Process: purine ribonucleotide metabolic process (GO:0009150);; Biological Process: ribonucleoside monophosphate metabolic process (GO:0009161);; Biological Process: purine ribonucleoside monophosphate metabolic process (GO:0009167);; Biological Process: ribonucleoside triphosphate metabolic process (GO:0009199);; Biological Process: purine ribonucleoside triphosphate metabolic process (GO:0009205);; Biological Process: ribonucleotide metabolic process (GO:0009259);; Biological Process: cellular process (GO:0009987);; Biological Process: energy derivation by oxidation of organic compounds (GO:0015980);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);; Biological Process: drug metabolic process (GO:0017144);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: ribose phosphate metabolic process (GO:0019693);; Cellular Component: organelle inner membrane (GO:0019866);; Biological Process: electron transport chain (GO:0022900);; Biological Process: respiratory electron transport chain (GO:0022904);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: mitochondrial membrane (GO:0031966);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: envelope (GO:0031975);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: ATP synthesis coupled electron transport (GO:0042773);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete mitochondrial part (GO:0044429);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete mitochondrial membrane part (GO:0044455);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: respiratory chain complex IV (GO:0045277);; Biological Process: cellular respiration (GO:0045333);; Biological Process: ATP metabolic process (GO:0046034);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: nucleobase-containing small molecule metabolic process (GO:0055086);; Biological Process: oxidation-reduction process (GO:0055114);; Cellular Component: cytochrome complex (GO:0070069);; Cellular Component: respirasome (GO:0070469);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: purine-containing compound metabolic process (GO:0072521);; Cellular Component: membrane protein complex (GO:0098796);; Cellular Component: mitochondrial protein complex (GO:0098798);; Cellular Component: inner mitochondrial membrane protein complex (GO:0098800);; Cellular Component: respiratory chain complex (GO:0098803);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K02261|1.6e-36|bvg:809487|K02261 cytochrome c oxidase subunit 2 | (RefSeq) cox2, BevupMp088; cytochrome c oxidase subunit 2","[C]","Energy production and conversion ","--","Cytochrome c oxidase subunit 2 OS=Zea mays OX=4577 GN=COX2 PE=2 SV=4","Cytochrome c oxidase subunit 2 OS=Roya anglica OX=43943 GN=cox2 PE=4 SV=1","C","Energy production and conversion","cytochrome oxidase subunit 2 [Allomyces macrogynus]","molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; molecular function: electron carrier activity (GO:0009055);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: cellular process (GO:0009987)","Oxidative phosphorylation (ko00190)"]
["c111966.graph_c0",471,13.21,514,13.88,544,15.7,1290,36.9,1127,37.28,1481,42.27,7.51e-28,1.018104059,"up","--","--","Cellular Component: protein phosphatase type 2A complex (GO:0000159);; Biological Process: signal transduction (GO:0007165);; Molecular Function: protein phosphatase regulator activity (GO:0019888);; ","K11584|8.4e-263|oeu:111398717|K11584 serine/threonine-protein phosphatase 2A regulatory subunit B' | (RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like","[T]","Signal transduction mechanisms ","Protein phosphatase 2A regulatory B subunit (B56 family)","Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Arabidopsis thaliana OX=3702 GN=B'KAPPA PE=1 SV=1","Serine/threonine protein phosphatase 2A regulatory subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26577 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular function regulator (GO:0098772)","mRNA surveillance pathway (ko03015)"]
["c100590.graph_c0",23,1.55,46,3.15,24,1.66,0,0,0,0,0,0,5.21e-11,-5.376286777,"down","--","--","--","--","--","--","--","--","Polycystic kidney disease and receptor for egg jelly-related protein (Fragment) OS=Anthurium amnicola OX=1678845 GN=PKDREJ PE=4 SV=1","--","--","--","--","--"]
["c103423.graph_c1",12,0.68,21,1.16,23,1.47,46,2.68,74,5.72,62,3.74,0.000499631,1.331677857,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_22522 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111382435 [Olea europaea var. sylvestris]","--","--"]
["c37249.graph_c0",35,3.46,68,6.34,57,5.79,8,0.81,15,1.74,6,0.6,1.26e-09,-2.621931703,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02987|1.3e-103|egr:104426364|K02987 small subunit ribosomal protein S4e | (RefSeq) 40S ribosomal protein S4-3","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal family S4e;; 40S ribosomal protein S4 C-terminus;; RS4NT (NUC023) domain;; S4 domain;; KOW motif","40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1","40S ribosomal protein S4 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpS4_2 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","40S ribosomal protein S4 [Rozella allomycis CSF55]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c112779.graph_c0",1038,28.1,1116,28.95,1126,32.52,497,14.46,449,14.79,599,16.85,4.16e-54,-1.411483471,"down","--","--","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; ","K20285|6.9e-19|peq:110019524|K20285 Rab9 effector protein with kelch motifs | (RefSeq) rab9 effector protein with kelch motifs-like isoform X1","[R]","General function prediction only ","Kelch motif;; Galactose oxidase, central domain;; Kelch motif;; Kelch motif;; Kelch motif;; Galactose oxidase, central domain;; Acyl CoA binding protein","Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=ACBP4 PE=1 SV=1","Putative acyl-CoA-binding domain-containing protein 4-like isoform X1 OS=Davidia involucrata OX=16924 GN=Din_009122 PE=3 SV=1","I","Lipid transport and metabolism","acyl-CoA-binding domain-containing protein 4-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c95170.graph_c0",5,0.28,4,0.14,2,0.08,18,0.7,18,0.77,34,1.33,0.000941904,2.070356775,"up","[MDT]","--","Molecular Function: ATP binding (GO:0005524);; ","K22399|1.7e-255|oeu:111402227|K22399 pachytene checkpoint protein 2 | (RefSeq) pachytene checkpoint protein 2 homolog","[O]","Posttranslational modification, protein turnover, chaperones ","ATPase family associated with various cellular activities (AAA);; AAA domain;; AAA domain (Cdc48 subfamily)","Pachytene checkpoint protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=PCH2 PE=2 SV=1","AAA+-type ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00883 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","pachytene checkpoint protein 2 homolog [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c112262.graph_c0",259,9.87,252,8.86,226,7.91,150,6.81,117,6.02,153,6.5,3.48e-13,-1.129561115,"down","[G]","Carbohydrate transport and metabolism ","--","K05841|2.2e-06|bvg:104899450|K05841 sterol 3beta-glucosyltransferase [EC:2.4.1.173] | (RefSeq) sterol 3-beta-glucosyltransferase UGT80A2","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004761mg PE=4 SV=1","--","--","sterol 3-beta-glucosyltransferase UGT80A2 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c89564.graph_c0",16,0.49,7,0.2,17,0.53,37,1.15,38,1.35,46,1.42,0.007045757,1.197690254,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13429|1.3e-49|cam:101510407|K13429 chitin elicitor receptor kinase 1 | (RefSeq) chitin elicitor receptor kinase 1-like","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; LysM domain","LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027333 PE=4 SV=1","T","Signal transduction mechanisms","protein LYK5-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant-pathogen interaction (ko04626)"]
["c83218.graph_c0",8036,306.74,9433,340.62,8618,338.88,4430,172.9,3441,153.82,4067,157.99,1.24e-105,-1.450865257,"down","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K15405|1.2e-120|crb:17895978|K15405 midchain alkane hydroxylase | (RefSeq) alkane hydroxylase MAH1","[QI]","--","Cytochrome P450","Noroxomaritidine synthase 1 OS=Narcissus pseudonarcissus OX=39639 GN=Cyp96T1 PE=2 SV=1","Cytochrome P450 CYP4/CYP19/CYP26 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27125 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","alkane hydroxylase MAH1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Cutin, suberine and wax biosynthesis (ko00073)"]
["c97336.graph_c0",12,0.24,6,0.11,13,0.26,70,1.44,63,1.48,83,1.71,1.16e-09,2.363169122,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K11498|1.5e-201|sind:105161961|K11498 centromeric protein E | (RefSeq) kinesin-like protein NACK2","[Z]","Cytoskeleton ","Domain of unknown function (DUF3490);; Kinesin motor domain;; Microtubule binding","Kinesin-like protein NACK2 OS=Nicotiana tabacum OX=4097 GN=NACK2 PE=1 SV=1","Kinesin-like protein OS=Davidia involucrata OX=16924 GN=Din_047215 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein NACK2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c102053.graph_c0",1185,55.46,1302,58.25,1173,56.92,166,7.68,285,13.81,248,10.64,9.33e-26,-2.651473205,"down","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: membrane (GO:0016020);; ","--","[R]","General function prediction only ","Guanylate-binding protein, N-terminal domain","--","guanylate-binding protein 1-like OS=Gossypium hirsutum OX=3635 GN=LOC107962253 PE=3 SV=1","S","Function unknown","hypothetical protein CRG98_043247 [Punica granatum]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020)","--"]
["c113248.graph_c1",2,0.2,1,0.09,0,0,29,3.03,17,1.97,39,3.92,5.83e-07,3.627056289,"up","[E]","Amino acid transport and metabolism ","Molecular Function: peptidyltransferase activity (GO:0000048);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glutathione catabolic process (GO:0006751);; Molecular Function: glutathione hydrolase activity (GO:0036374);; ","K18592|1.6e-88|oeu:111373088|K18592 gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase [EC:2.3.2.2 3.4.19.13 3.4.19.14] | (RefSeq) glutathione hydrolase 1-like isoform X1","[E]","Amino acid transport and metabolism ","Gamma-glutamyltranspeptidase","Glutathione hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=GGT1 PE=2 SV=1","gamma-glutamyltranspeptidase 1-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107789318 PE=4 SV=1","E","Amino acid transport and metabolism","glutathione hydrolase 1-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Taurine and hypotaurine metabolism (ko00430);; Cyanoamino acid metabolism (ko00460);; Glutathione metabolism (ko00480);; Arachidonic acid metabolism (ko00590)"]
["c113807.graph_c2",47,1.02,64,1.14,55,0.98,777,14.96,758,16.19,894,16.79,9.03e-122,3.525176648,"up","--","--","--","--","--","--","N-terminal C2 in EEIG1 and EHBP1 proteins","--","Putative myosin-9 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_013572 PE=4 SV=1","S","Function unknown","golgin subfamily A member 4-like [Olea europaea var. sylvestris]","--","--"]
["c106620.graph_c0",39,4.8,37,4.3,42,5.47,85,11.01,124,17.97,99,12.32,0.000215937,1.047485478,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: large ribosomal subunit (GO:0015934);; ","K02911|8.4e-65|oeu:111395337|K02911 large subunit ribosomal protein L32 | (RefSeq) uncharacterized protein LOC111395337","--","--","Ribosomal L32p protein family","--","50S ribosomal protein L32, chloroplastic OS=Dorcoceras hygrometricum OX=472368 GN=F511_34179 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111395337 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c108006.graph_c0",1620,46.65,1603,43.67,1418,42.21,3967,116.36,3768,126.15,4429,129.34,5.83e-75,1.066033911,"up","[MDT]","--","Molecular Function: ATP binding (GO:0005524);; ","K08900|1.3e-104|nnu:104597594|K08900 mitochondrial chaperone BCS1 | (RefSeq) AAA-ATPase At4g25835-like","[O]","Posttranslational modification, protein turnover, chaperones ","ATPase family associated with various cellular activities (AAA)","AAA-ATPase At5g57480 OS=Arabidopsis thaliana OX=3702 GN=At5g57480 PE=3 SV=1","Adenosinetriphosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25722 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","AAA-ATPase At5g57480-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117206.graph_c0",162,5.89,148,4.96,142,5.54,452,14.32,369,14.51,487,15.82,2.33e-18,1.199250426,"up","--","--","--","--","--","--","Putative gypsy type transposon","--","Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00005179 PE=4 SV=1","--","--","uncharacterized protein LOC111374549 [Olea europaea var. sylvestris]","--","--"]
["c107355.graph_c1",63,3.86,57,2.76,71,4.08,172,10.61,190,13.56,212,12.31,1.76e-09,1.247330181,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K14500|2.4e-152|oeu:111368481|K14500 BR-signaling kinase [EC:2.7.11.1] | (RefSeq) probable serine/threonine-protein kinase At5g41260","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Serine/threonine-protein kinase BSK5 OS=Arabidopsis thaliana OX=3702 GN=BSK5 PE=1 SV=1","Putative serine/threonine-protein kinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_35441 PE=3 SV=1","T","Signal transduction mechanisms","probable serine/threonine-protein kinase BSK3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Plant hormone signal transduction (ko04075)"]
["c99591.graph_c1",4,0.14,0,0,3,0.11,48,1.74,68,2.83,58,2.1,6.14e-12,3.876466278,"up","[M]","Cell wall/membrane/envelope biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: long-chain-alcohol O-fatty-acyltransferase activity (GO:0047196);; Molecular Function: arachidoyl-CoA:1-dodecanol O-acyltransferase activity (GO:0102966);; ","--","--","--","Membrane bound O-acyl transferase family","Long-chain-alcohol O-fatty-acyltransferase OS=Simmondsia chinensis OX=3999 PE=1 SV=1","Long-chain-alcohol O-fatty-acyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20119 PE=3 SV=1","S","Function unknown","long-chain-alcohol O-fatty-acyltransferase-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c105991.graph_c0",33,1.18,45,1.52,56,2.06,14,0.55,12,0.5,20,0.73,7.13e-06,-1.796780469,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; ","K11583|5.3e-10|oeu:111376920|K11583 serine/threonine-protein phosphatase 2A regulatory subunit B'' | (RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1","[A]","RNA processing and modification ","--","Serine/threonine protein phosphatase 2A regulatory subunit B''beta OS=Arabidopsis thaliana OX=3702 GN=B''BETA PE=1 SV=1","Protein phosphatase 2 regulatory subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17006 PE=4 SV=1","A","RNA processing and modification","serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","mRNA surveillance pathway (ko03015)"]
["c98696.graph_c1",3,0.17,3,0.12,0,0,25,1.28,43,2.67,42,1.85,7.77e-08,3.387494052,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Auxin canalisation;; Plant pleckstrin homology-like region","VAN3-binding protein OS=Arabidopsis thaliana OX=3702 GN=VAB PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24734 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_24734 [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104984.graph_c0",1184,59.5,1060,50.36,1024,53,672,34.52,490,28.87,631,32.3,1.05e-35,-1.190433526,"down","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: base-excision repair (GO:0006284);; Biological Process: DNA modification (GO:0006304);; Biological Process: DNA alkylation (GO:0006305);; Biological Process: DNA methylation (GO:0006306);; Biological Process: regulation of gene expression by genetic imprinting (GO:0006349);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cellular process (GO:0009987);; Biological Process: fruit development (GO:0010154);; Biological Process: regulation of gene expression (GO:0010468);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Molecular Function: DNA N-glycosylase activity (GO:0019104);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Biological Process: methylation (GO:0032259);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Cellular Component: megasporocyte nucleus (GO:0043076);; Cellular Component: polar nucleus (GO:0043078);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: DNA methylation or demethylation (GO:0044728);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: seed development (GO:0048316);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: genetic imprinting (GO:0071514);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; ","--","--","--","--","Transcriptional activator DEMETER OS=Arabidopsis thaliana OX=3702 GN=DME PE=1 SV=2","ENDO3c domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000238mg PE=3 SV=1","L","Replication, recombination and repair","transcriptional activator DEMETER-like [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c105084.graph_c0",48,2.8,43,2.17,41,2,131,7.59,186,11.55,188,10.17,4.14e-11,1.591984145,"up","--","--","Biological Process: biological_process (GO:0008150);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: regulation of localization (GO:0032879);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of transport (GO:0051049);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: regulation of auxin polar transport (GO:2000012);; ","K18266|1.7e-131|vvi:100262295|K18266 protein NDRG1 | (RefSeq) pollen-specific protein SF21","[S]","Function unknown ","Ndr family","Protein NDL2 OS=Arabidopsis thaliana OX=3702 GN=NDL2 PE=1 SV=1","pollen-specific protein SF21-like isoform X5 OS=Nicotiana tabacum OX=4097 GN=LOC107808147 PE=3 SV=1","S","Function unknown","protein NDL2-like isoform X1 [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007)","--"]
["c105072.graph_c0",55,4.82,58,5.82,74,6.8,19,1.98,22,1.92,27,2.13,1.86e-07,-1.735698251,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c73048.graph_c1",40,5.62,42,5.64,46,6.62,112,16.13,120,19.82,131,18.73,2.91e-06,1.160905071,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: transcription coregulator activity (GO:0003712);; Molecular Function: transcription corepressor activity (GO:0003714);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to wounding (GO:0009611);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: regulation of defense response (GO:0031347);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of response to stress (GO:0080134);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: regulation of jasmonic acid mediated signaling pathway (GO:2000022);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K13464|1.0e-66|oeu:111404294|K13464 jasmonate ZIM domain-containing protein | (RefSeq) protein TIFY 10A-like","--","--","tify domain","Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1","Tify domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19004 PE=3 SV=1","S","Function unknown","protein TIFY 10A-like [Olea europaea var. sylvestris]","molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c109415.graph_c0",10,0.32,4,0.12,9,0.3,36,1.18,33,1.24,37,1.21,0.000390923,1.749068414,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K15472|2.4e-173|spen:107017184|K15472 premnaspirodiene oxygenase [EC:1.14.14.151] | (RefSeq) premnaspirodiene oxygenase","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450","Premnaspirodiene oxygenase OS=Hyoscyamus muticus OX=35626 GN=CYP71D55 PE=1 SV=1","Cytochrome P450 CYP71D413 OS=Salvia miltiorrhiza OX=226208 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 CYP71D413 [Salvia miltiorrhiza]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Sesquiterpenoid and triterpenoid biosynthesis (ko00909)"]
["c112569.graph_c0",2724,285.47,2845,283.09,2488,273.35,1326,136.02,1137,125.86,1213,117.21,1.12e-106,-1.451142658,"down","--","--","Cellular Component: integral component of plasma membrane (GO:0005887);; Molecular Function: sucrose transmembrane transporter activity (GO:0008515);; ","K15378|6.0e-57|oeu:111372470|K15378 solute carrier family 45, member 1/2/4 | (RefSeq) sucrose transport protein-like","[G]","Carbohydrate transport and metabolism ","--","Sucrose transport protein OS=Spinacia oleracea OX=3562 PE=2 SV=1","Sucrose transporter OS=Fraxinus excelsior OX=38873 GN=SUT1 PE=2 SV=1","G","Carbohydrate transport and metabolism","sucrose transport protein-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c107750.graph_c0",44,0.95,34,0.61,33,0.64,149,3.31,138,3.47,118,2.57,3.28e-09,1.523258093,"up","--","--","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: O-acyltransferase activity (GO:0008374);; Cellular Component: integral component of membrane (GO:0016021);; ","K00679|0.0e+00|oeu:111401783|K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] | (RefSeq) putative phospholipid:diacylglycerol acyltransferase 2 isoform X1","[I]","Lipid transport and metabolism ","Lecithin:cholesterol acyltransferase","Putative phospholipid:diacylglycerol acyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=PDAT2 PE=3 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_022185 PE=4 SV=1","I","Lipid transport and metabolism","putative phospholipid:diacylglycerol acyltransferase 2 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Glycerolipid metabolism (ko00561)"]
["c117905.graph_c0",31,0.38,20,0.22,28,0.34,9,0.11,11,0.15,12,0.14,0.00155198,-1.528868996,"down","[L]","Replication, recombination and repair ","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: DNA integration (GO:0015074);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K07393|1.1e-81|soe:110775499|K07393 glutathionyl-hydroquinone reductase [EC:1.8.5.7] | (RefSeq) uncharacterized protein LOC110775499","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase;; Reverse transcriptase-like;; Retrotransposon gag protein;; Integrase zinc binding domain;; RNase H","RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1","Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22840 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111412594 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c81550.graph_c0",0,0,0,0,2,0.18,137,12.29,188,19.21,178,15.78,3.83e-24,6.358934546,"up","--","--","--","--","--","--","--","--","--","--","--","E3 ubiquitin-protein ligase RNF181-like [Olea europaea var. sylvestris]","--","--"]
["c90088.graph_c0",385,78.82,453,86.76,397,83.02,146,35.2,157,43.41,181,42.88,8.97e-36,-1.66550101,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97682.graph_c0",15,0.58,9,0.34,8,0.34,100,4.12,132,6.12,129,5.18,1.12e-18,3.069423328,"up","[E]","Amino acid transport and metabolism ","Molecular Function: carboxy-lyase activity (GO:0016831);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","K01590|1.2e-271|oeu:111390604|K01590 histidine decarboxylase [EC:4.1.1.22] | (RefSeq) LOW QUALITY PROTEIN: serine decarboxylase-like","[E]","Amino acid transport and metabolism ","Pyridoxal-dependent decarboxylase conserved domain","Serine decarboxylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SDC1 PE=3 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_022327 PE=3 SV=1","E","Amino acid transport and metabolism","LOW QUALITY PROTEIN: serine decarboxylase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Histidine metabolism (ko00340)"]
["c113794.graph_c1",1493,32.1,1761,35.64,1631,36.7,5295,110.12,4276,103.05,5177,107.43,1.19e-78,1.266812425,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|5.4e-53|obr:102714965|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) brassinosteroid LRR receptor kinase","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat;; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana OX=3702 GN=At3g28040 PE=1 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00041994001 PE=4 SV=1","T","Signal transduction mechanisms","probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c92314.graph_c2",6,2.04,13,3.94,7,2.4,32,9.81,38,14.5,49,15.03,0.000198616,1.759589345,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97669.graph_c0",604,52.77,626,51.57,623,55.94,211,18.91,135,13.89,213,18.98,1.1e-58,-2.051060275,"down","--","--","Molecular Function: chaperone binding (GO:0051087);; ","--","[T]","Signal transduction mechanisms ","--","BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1","BAG family molecular chaperone regulator like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28019 PE=4 SV=1","T","Signal transduction mechanisms","BAG family molecular chaperone regulator 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c107482.graph_c2",461,20.4,531,22.27,528,24.07,115,5,87,4.53,111,5.09,7.53e-76,-2.592281297,"down","[R]","General function prediction only ","Molecular Function: protein binding (GO:0005515);; Biological Process: regulation of carbohydrate metabolic process (GO:0006109);; Biological Process: response to stress (GO:0006950);; Biological Process: organelle organization (GO:0006996);; Biological Process: cell communication (GO:0007154);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular response to starvation (GO:0009267);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: plastid organization (GO:0009657);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: response to extracellular stimulus (GO:0009991);; Biological Process: cellular response to sulfur starvation (GO:0010438);; Biological Process: regulation of glucosinolate biosynthetic process (GO:0010439);; Biological Process: regulation of cellular carbohydrate metabolic process (GO:0010675);; Biological Process: cellular component organization (GO:0016043);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: response to nutrient levels (GO:0031667);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: cellular response to nutrient levels (GO:0031669);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: response to starvation (GO:0042594);; Biological Process: regulation of sulfur metabolic process (GO:0042762);; Biological Process: regulation of carbohydrate biosynthetic process (GO:0043255);; Biological Process: regulation of secondary metabolic process (GO:0043455);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of small molecule metabolic process (GO:0062012);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to external stimulus (GO:0071496);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of secondary metabolite biosynthetic process (GO:1900376);; ","K14152|9.4e-32|cpep:111783531|K14152 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase [EC:3.6.1.31 3.5.4.19 1.1.1.23] | (RefSeq) uncharacterized protein LOC111783531","--","--","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana OX=3702 GN=At1g04770 PE=2 SV=1","TPR_REGION domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_035988 PE=4 SV=1","S","Function unknown","protein SULFUR DEFICIENCY-INDUCED 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Histidine metabolism (ko00340);; Biosynthesis of amino acids (ko01230)"]
["c104593.graph_c3",3,0.14,7,0.32,4,0.2,27,1.42,23,1.38,31,1.63,0.00044496,2.004306578,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c68938.graph_c0",46,5.19,51,5.42,42,4.86,26,3.01,9,1.19,6,0.69,6.94e-06,-1.969829553,"down","--","--","--","--","--","--","Lytic transglycolase","EG45-like domain containing protein OS=Citrus jambhiri OX=64884 GN=CjBAp12 PE=1 SV=1","Expansin-like EG45 domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_043602 PE=4 SV=1","S","Function unknown","EG45-like domain containing protein [Olea europaea var. sylvestris]","--","--"]
["c89591.graph_c0",4,0.17,3,0.12,1,0.04,26,1.14,15,0.75,20,0.87,0.000800223,2.25211881,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K15121|7.8e-180|oeu:111371547|K15121 solute carrier family 25, member 44 | (RefSeq) solute carrier family 25 member 44-like isoform X1","[C]","Energy production and conversion ","Mitochondrial carrier protein","Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana OX=3702 GN=BOU PE=1 SV=1","Putative solute carrier family 25 member 44-like OS=Davidia involucrata OX=16924 GN=Din_016744 PE=3 SV=1","C","Energy production and conversion","solute carrier family 25 member 44-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97137.graph_c1",22,0.79,22,0.75,23,0.89,58,2.03,69,2.59,59,1.93,0.001132706,1.120905526,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042909 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111374345 [Olea europaea var. sylvestris]","--","--"]
["c116179.graph_c0",87,3.71,104,4.19,62,3.09,243,13.46,237,14.52,267,14.67,2.94e-11,1.233306365,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16736 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111401129 [Olea europaea var. sylvestris]","--","--"]
["c102232.graph_c2",263,20.79,258,19.24,201,16.33,40,3.26,42,3.81,29,2.37,4.7e-44,-2.976509895,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97322.graph_c0",1,0.04,0,0,0,0,22,0.97,33,1.66,32,1.4,4.44e-08,4.338532,"up","--","--","Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","K19747|1.3e-65|hbr:110662183|K19747 BAHD acyltransferase [EC:2.3.1.-] | (RefSeq) BAHD acyltransferase DCR","--","--","Transferase family","Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN=At3g50280 PE=3 SV=1","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_011976 PE=3 SV=1","S","Function unknown","uncharacterized acetyltransferase At3g50280-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c117773.graph_c1",3361,85.82,3427,82.83,2998,78.91,512,13.36,333,9.97,469,12.2,0,-3.217102224,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K15601|6.9e-45|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034198 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein F0562_034198 [Nyssa sinensis]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c115460.graph_c0",13,0.74,5,0.54,8,0.35,102,3.25,100,3.54,110,4.43,2.76e-17,3.132361246,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","Transcription factor bHLH47 OS=Arabidopsis thaliana OX=3702 GN=BHLH47 PE=1 SV=1","Transcription factor BHLH039 (Fragment) OS=Vaccinium corymbosum OX=69266 PE=2 SV=1","K","Transcription","transcription factor bHLH47-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117289.graph_c1",14,0.78,10,0.53,9,0.52,46,2.63,53,3.47,35,1.99,0.000227503,1.623531269,"up","--","--","--","K14494|6.1e-26|pavi:110751454|K14494 DELLA protein | (RefSeq) DELLA protein GAIP-B","--","--","GRAS domain family","Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1","GRAS domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00030446001 PE=3 SV=1","K","Transcription","scarecrow-like protein 6 [Olea europaea var. sylvestris]","--","Plant hormone signal transduction (ko04075)"]
["c87376.graph_c0",164,10.98,175,11.06,148,10.19,820,56.17,733,57.53,748,50.95,2.61e-58,1.9134033,"up","[HR]","--","--","--","--","--","Alpha/beta hydrolase family;; alpha/beta hydrolase fold;; Serine aminopeptidase, S33","Probable esterase D14L OS=Oryza sativa subsp. japonica OX=39947 GN=D14L PE=1 SV=1","AB hydrolase-1 domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_18472 PE=4 SV=1","S","Function unknown","probable esterase D14L [Olea europaea var. sylvestris]","--","--"]
["c116137.graph_c0",2,0.19,14,1.32,3,0.29,65,6.3,74,8.22,50,4.81,4.91e-09,2.817307584,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","[K]","Transcription ","Associated with HOX","BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=BLH2 PE=1 SV=3","Homeobox domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_41525 PE=3 SV=1","K","Transcription","BEL1-like homeodomain protein 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c103919.graph_c0",316,8.31,299,7.58,260,7.04,658,17.88,768,24.05,777,21.34,6.91e-18,1.010568711,"up","--","--","Molecular Function: DNA binding (GO:0003677);; ","K11111|2.7e-06|mis:MICPUN_105273|K11111 telomeric repeat-binding factor 2 | (RefSeq) predicted protein","--","--","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","--","Telomere repeat-binding factor like-protein OS=Rehmannia glutinosa OX=99300 GN=MYB28 PE=2 SV=1","K","Transcription","uncharacterized protein LOC111365390 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c79163.graph_c0",191,16.95,252,21.09,168,15.31,806,73.21,1179,122.73,1241,112.04,2.09e-16,2.053013383,"up","--","--","Cellular Component: cell wall (GO:0005618);; Molecular Function: manganese ion binding (GO:0030145);; Molecular Function: nutrient reservoir activity (GO:0045735);; Cellular Component: apoplast (GO:0048046);; ","K00384|2.2e-11|vvi:109124153|K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] | (RefSeq) thioredoxin reductase 1-like","--","--","Cupin;; Cupin domain","Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana OX=3702 GN=At5g39130 PE=2 SV=1","Germin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21302 PE=3 SV=1","S","Function unknown","germin-like protein subfamily 1 member 13, partial [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: nutrient reservoir activity (GO:0045735);; cellular component: extracellular region (GO:0005576)","Selenocompound metabolism (ko00450)"]
["c90321.graph_c0",15,1.05,7,0.45,7,0.49,55,3.89,87,7.07,88,6.15,3.51e-10,2.545870892,"up","--","--","Molecular Function: electron transfer activity (GO:0009055);; ","--","--","--","Plastocyanin-like domain","Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1","Phytocyanin domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26947 PE=4 SV=1","S","Function unknown","lamin-like protein [Olea europaea var. sylvestris]","molecular function: electron carrier activity (GO:0009055)","--"]
["c117908.graph_c0",98,0.72,154,1.08,87,0.66,45,0.34,33,0.28,46,0.53,7.69e-11,-1.735342665,"down","--","--","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: DNA integration (GO:0015074);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K02469|2.0e-101|lang:109359716|K02469 DNA gyrase subunit A [EC:5.6.2.2] | (RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like","[R]","General function prediction only ","RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase;; Reverse transcriptase (RNA-dependent DNA polymerase);; Integrase zinc binding domain;; Retrotransposon gag protein;; Retroviral aspartyl protease","Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1","Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_043911 PE=4 SV=1","E","Amino acid transport and metabolism","hypothetical protein VITISV_043911 [Vitis vinifera]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c115296.graph_c0",188,4.72,235,5.27,211,5.23,550,19.67,523,19.4,606,18.86,3.89e-19,1.0776076,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity (GO:0047186);; ","K03377|4.2e-198|oeu:111376809|K03377 N-acetylneuraminate 9-O-acetyltransferase [EC:2.3.1.45] | (RefSeq) protein REDUCED WALL ACETYLATION 2-like","[R]","General function prediction only ","10 TM Acyl Transferase domain found in Cas1p","Protein REDUCED WALL ACETYLATION 2 OS=Arabidopsis thaliana OX=3702 GN=RWA2 PE=1 SV=1","O-acetyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16803 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein REDUCED WALL ACETYLATION 2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c85610.graph_c0",1538,144.73,1686,150.14,1330,123.8,273,25.47,293,31.41,398,38.52,1.16e-140,-2.556235124,"down","--","--","Biological Process: response to water (GO:0009415);; ","--","--","--","Dehydrin","--","Dehydrin (Fragment) OS=Hippophae rhamnoides subsp. sinensis OX=193531 PE=2 SV=1","--","--","dehydrin DHN1-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c105572.graph_c0",49,8.42,35,5.63,34,5.96,23,4.05,10,2.02,21,3.83,0.000608882,-1.397822579,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; ","K24345|2.5e-37|oeu:111411952|K24345 calcium-binding protein KIC and related proteins | (RefSeq) calcium-binding protein KIC-like","[ZD]","--","EF-hand domain pair","Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2","Ca2+-binding protein (Centrin/caltractin), EF-Hand superfamily protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09986 PE=4 SV=1","--","--","calcium-binding protein KIC-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c108947.graph_c0",93,3.91,117,4.64,82,3.3,37,1.81,22,0.95,43,1.73,7.3e-11,-1.806834259,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115455.graph_c0",140,4.79,144,3.94,125,3.87,462,14.04,382,13.41,462,13.98,9.39e-23,1.343892348,"up","--","--","Molecular Function: NAD+ kinase activity (GO:0003951);; Molecular Function: diacylglycerol kinase activity (GO:0004143);; Molecular Function: ATP binding (GO:0005524);; Biological Process: defense response (GO:0006952);; Biological Process: protein kinase C-activating G protein-coupled receptor signaling pathway (GO:0007205);; ","K00901|1.2e-177|oeu:111395389|K00901 diacylglycerol kinase (ATP) [EC:2.7.1.107] | (RefSeq) diacylglycerol kinase 5 isoform X1","[IT]","--","Diacylglycerol kinase catalytic domain;; Diacylglycerol kinase accessory domain","Diacylglycerol kinase 5 OS=Arabidopsis thaliana OX=3702 GN=DGK5 PE=2 SV=1","diacylglycerol kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005244mg PE=3 SV=1","--","--","diacylglycerol kinase 5 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564);; Phosphatidylinositol signaling system (ko04070)"]
["c114793.graph_c0",11,0.1,14,0.12,11,0.11,63,0.61,99,1.05,101,0.96,2.57e-11,2.455706194,"up","[R]","General function prediction only ","Cellular Component: nucleus (GO:0005634);; Molecular Function: metal ion binding (GO:0046872);; ","K20782|1.3e-19|oeu:111387211|K20782 hydroxyproline O-arabinosyltransferase [EC:2.4.2.58] | (RefSeq) hydroxyproline O-arabinosyltransferase 1-like","[BK]","--","PHD-zinc-finger like domain;; Tify domain binding domain;; PHD-like zinc-binding domain;; PHD-finger;; PHD-finger;; SET domain","Hydroxyproline O-arabinosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=HPAT1 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_031818 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375755 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","Other types of O-glycan biosynthesis (ko00514)"]
["c95439.graph_c0",40,1.19,19,0.54,44,1.36,209,6.56,216,7.68,245,7.71,1.28e-21,2.3314701,"up","--","--","Molecular Function: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (GO:0000224);; ","K03549|6.0e-16|cann:107865483|K03549 KUP system potassium uptake protein | (RefSeq) potassium transporter 5-like","--","--","Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis OX=3755 PE=1 SV=2","Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15276 PE=4 SV=1","S","Function unknown","peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c99119.graph_c0",6,0.32,4,0.2,2,0.11,40,2.19,85,5.8,99,5.38,1.04e-12,3.601564353,"up","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Cellular Component: membrane (GO:0016020);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: signaling (GO:0023052);; Biological Process: negative regulation of signaling (GO:0023057);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to alcohol (GO:0097305);; Biological Process: cellular response to alcohol (GO:0097306);; Biological Process: regulation of brassinosteroid mediated signaling pathway (GO:1900457);; Biological Process: negative regulation of brassinosteroid mediated signaling pathway (GO:1900458);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","Remorin, C-terminal region","Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1","Remorin_C domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_017130 PE=3 SV=1","S","Function unknown","remorin 4.1-like isoform X1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c101086.graph_c0",0,0,1,0.05,3,0.18,26,1.53,37,2.5,26,1.58,4.83e-07,3.475671199,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108220.graph_c0",42,1.89,35,1.57,37,1.65,160,5.72,174,6.94,207,7.99,2.16e-16,1.893701026,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","K20557|5.2e-25|aof:109830380|K20557 transcription factor VIP1 | (RefSeq) transcription factor RF2a-like","--","--","--","bZIP transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=BZIP18 PE=1 SV=1","BZIP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23263 PE=4 SV=1","K","Transcription","transcription factor RF2b [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","MAPK signaling pathway - plant (ko04016)"]
["c103879.graph_c0",413,24.3,421,22.83,387,22.47,74,3.15,56,2.72,63,3.12,3.43e-78,-2.963756879,"down","--","--","Biological Process: response to acid chemical (GO:0001101);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calcium-dependent phospholipid binding (GO:0005544);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: biological_process (GO:0008150);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to chemical (GO:0042221);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K17098|1.1e-87|oeu:111377845|K17098 annexin D | (RefSeq) annexin D3-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Annexin","Annexin D3 OS=Arabidopsis thaliana OX=3702 GN=ANN3 PE=2 SV=2","Annexin OS=Salvia splendens OX=180675 GN=Saspl_041159 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","annexin D3-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c114899.graph_c0",145,6.87,133,7.27,118,5.67,350,17.41,311,15.98,415,21.46,1.1e-13,1.108771772,"up","--","--","Biological Process: regulation of defense response to fungus (GO:1900150);; ","--","--","--","--","--","zinc_ribbon_12 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_012474 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111392676 [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007)","--"]
["c102432.graph_c0",203,9.87,220,10.11,160,8.01,103,5.12,114,6.49,116,5.74,5.4e-10,-1.114639189,"down","--","--","--","--","--","--","Carbohydrate esterase, sialic acid-specific acetylesterase","Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2","SASA domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_04820 PE=4 SV=1","S","Function unknown","probable carbohydrate esterase At4g34215 [Olea europaea var. sylvestris]","--","--"]
["c105523.graph_c0",1090,38.1,1079,35.94,1063,38.39,372,13.27,378,15.62,410,14.73,7.65e-92,-1.797533035,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity (GO:0016787);; ","--","--","--","--","--","Metallophos domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000678mg PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111408811 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c99288.graph_c0",51,3.8,54,2.89,60,4.1,8,0.46,2,0.1,9,0.47,1.63e-13,-3.259593938,"down","--","--","Biological Process: telomere maintenance (GO:0000723);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; ","K15255|1.0e-17|oeu:111404493|K15255 ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] | (RefSeq) uncharacterized protein LOC111404493","[D]","Cell cycle control, cell division, chromosome partitioning ","Homeodomain","--","ATP-dependent DNA helicase OS=Trema orientale OX=63057 GN=TorRG33x02_256560 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","uncharacterized protein LOC111370209 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)","--"]
["c98951.graph_c0",2,0.07,3,0.11,1,0.04,30,1.15,41,1.8,38,1.45,4.75e-08,3.389842935,"up","--","--","Molecular Function: zinc ion transmembrane transporter activity (GO:0005385);; Cellular Component: integral component of membrane (GO:0016021);; ","K14709|7.9e-181|oeu:111372341|K14709 solute carrier family 39 (zinc transporter), member 1/2/3 | (RefSeq) zinc transporter 5-like","[P]","Inorganic ion transport and metabolism ","ZIP Zinc transporter","Zinc transporter 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ZIP5 PE=2 SV=1","Zinc transporter 5-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_12064 PE=3 SV=1","P","Inorganic ion transport and metabolism","zinc transporter 5-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c118150.graph_c0",0,0,0,0,0,0,45,3.9,43,4.27,61,5.26,9.31e-12,5.488704172,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107392.graph_c2",1,0.06,3,0.16,7,0.4,58,3.24,39,2.45,53,2.92,2.96e-09,3.142383876,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ribosome binding (GO:0043022);; Molecular Function: ribosomal large subunit binding (GO:0043023);; ","--","--","--","Leucine Rich Repeat;; Leucine Rich repeat","LRR receptor-like serine/threonine-protein kinase GHR1 OS=Arabidopsis thaliana OX=3702 GN=GHR1 PE=1 SV=2","Obg-like ATPase 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_32700 PE=3 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At4g20940 isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101203.graph_c0",20,0.91,21,0.74,15,0.51,72,2.47,49,1.84,57,1.8,0.000337868,1.29984324,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K14498|5.7e-169|oeu:111377863|K14498 serine/threonine-protein kinase SRK2 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase SAPK7-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK7 PE=2 SV=2","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00005366001 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase SAPK7-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c98819.graph_c0",55,2.16,27,1,44,1.78,276,11.06,182,8.35,238,9.49,1.24e-18,2.099172637,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: quinolinate synthetase A activity (GO:0008987);; Biological Process: NAD biosynthetic process (GO:0009435);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K03517|3.1e-235|sind:105157297|K03517 quinolinate synthase [EC:2.5.1.72] | (RefSeq) quinolinate synthase, chloroplastic isoform X1","--","--","Quinolinate synthetase A protein","Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 SV=1","Quinolinate synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05243 PE=4 SV=1","H","Coenzyme transport and metabolism","quinolinate synthase, chloroplastic isoform X2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c88644.graph_c0",55,5.15,77,6.84,84,8.23,218,20.97,239,26.33,314,29.99,1.9e-13,1.489598346,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: auxin-activated signaling pathway (GO:0009734);; ","K14484|6.8e-42|nsy:104218852|K14484 auxin-responsive protein IAA | (RefSeq) auxin-responsive protein IAA28-like isoform X1","--","--","AUX/IAA family","Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2","Auxin-responsive protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03274 PE=3 SV=1","K","Transcription","auxin-responsive protein IAA29-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c88984.graph_c0",24,3.76,25,3.72,25,3.88,5,0.79,3,0.51,4,0.58,2.35e-06,-2.671278206,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_010063 PE=4 SV=1","--","--","uncharacterized protein LOC111396470 [Olea europaea var. sylvestris]","--","--"]
["c105578.graph_c1",27,0.72,17,0.45,21,0.6,51,1.43,87,2.79,81,2.25,9.35e-05,1.386606601,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication initiation (GO:0006270);; Cellular Component: MCM complex (GO:0042555);; ","K02541|0.0e+00|oeu:111397116|K02541 DNA replication licensing factor MCM3 [EC:3.6.4.12] | (RefSeq) DNA replication licensing factor MCM3 homolog 2","[L]","Replication, recombination and repair ","MCM P-loop domain;; MCM AAA-lid domain;; MCM OB domain;; Magnesium chelatase, subunit ChlI","DNA replication licensing factor MCM3 homolog 2 OS=Zea mays OX=4577 GN=ROA2 PE=2 SV=1","DNA helicase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07035 PE=3 SV=1","L","Replication, recombination and repair","DNA replication licensing factor MCM3 homolog 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; cellular component: macromolecular complex (GO:0032991)","DNA replication (ko03030)"]
["c115222.graph_c0",253,7.89,260,7.69,259,8.35,72,2.32,69,2.52,61,1.93,2.68e-36,-2.235269306,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106120.graph_c0",23,1.47,39,2.35,18,1.18,108,7.05,109,8.15,143,9.28,4.72e-10,1.808498839,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","--","Transcription factor bHLH60 OS=Arabidopsis thaliana OX=3702 GN=BHLH60 PE=1 SV=1","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07319 PE=4 SV=1","K","Transcription","transcription factor bHLH48-like isoform X1 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c86273.graph_c1",172,18.54,179,18.29,191,21.26,723,80.08,901,113.66,906,99.03,6e-48,1.893719805,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: monooxygenase activity (GO:0004497);; Cellular Component: chloroplast (GO:0009507);; Biological Process: photorespiration (GO:0009853);; Biological Process: carbon fixation (GO:0015977);; Biological Process: photosynthesis (GO:0015979);; Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984);; ","K01602|6.1e-94|oeu:111391236|K01602 ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] | (RefSeq) ribulose bisphosphate carboxylase small chain, chloroplastic-like","--","--","Ribulose bisphosphate carboxylase, small chain;; Ribulose-1,5-bisphosphate carboxylase small subunit","Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. OX=3751 GN=RBCS PE=2 SV=1","Ribulose bisphosphate carboxylase small chain OS=Nyssa sinensis OX=561372 GN=F0562_005278 PE=3 SV=1","E","Amino acid transport and metabolism","ribulose bisphosphate carboxylase small chain, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c98713.graph_c0",2,0.03,0,0,0,0,60,1.04,73,1.44,65,1.12,5.01e-14,5.114935942,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20359|2.9e-31|eus:EUTSA_v10006389mg|K20359 PRA1 family protein 1 | (RefSeq) hypothetical protein","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana OX=3702 GN=At5g10020 PE=1 SV=2","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001732 PE=4 SV=1","T","Signal transduction mechanisms","probable inactive receptor kinase At5g10020 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105313.graph_c0",66,2.31,84,2.88,57,2.04,194,7.05,240,10.07,255,9.24,3.23e-12,1.403173986,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: protein folding (GO:0006457);; Biological Process: biological_process (GO:0008150);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Cellular Component: cell junction (GO:0030054);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: symplast (GO:0055044);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","--","U1-type domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004357 PE=4 SV=1","S","Function unknown","BAG family molecular chaperone regulator 8, chloroplastic [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: symplast (GO:0055044)","--"]
["c103133.graph_c0",69,3.35,102,4.7,67,3.51,4,0.33,0,0,3,0.15,3.34e-21,-4.92687601,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111385064 [Olea europaea var. sylvestris]","--","--"]
["c98862.graph_c0",51,2.19,35,1.41,48,2.08,142,6.12,209,10.32,178,7.61,5.54e-11,1.635859335,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: transport (GO:0006810);; Biological Process: ion transport (GO:0006811);; Biological Process: cation transport (GO:0006812);; Biological Process: cellular ion homeostasis (GO:0006873);; Biological Process: cellular metal ion homeostasis (GO:0006875);; Biological Process: biological_process (GO:0008150);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: cellular process (GO:0009987);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular homeostasis (GO:0019725);; Biological Process: metal ion transport (GO:0030001);; Biological Process: cellular cation homeostasis (GO:0030003);; Cellular Component: cell junction (GO:0030054);; Biological Process: homeostatic process (GO:0042592);; Molecular Function: ion binding (GO:0043167);; Molecular Function: cation binding (GO:0043169);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: transition metal ion binding (GO:0046914);; Biological Process: cellular transition metal ion homeostasis (GO:0046916);; Biological Process: chemical homeostasis (GO:0048878);; Biological Process: ion homeostasis (GO:0050801);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Cellular Component: symplast (GO:0055044);; Biological Process: metal ion homeostasis (GO:0055065);; Biological Process: transition metal ion homeostasis (GO:0055076);; Biological Process: cation homeostasis (GO:0055080);; Biological Process: cellular chemical homeostasis (GO:0055082);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: inorganic ion homeostasis (GO:0098771);; ","--","[P]","Inorganic ion transport and metabolism ","--","Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029366 PE=4 SV=1","P","Inorganic ion transport and metabolism","heavy metal-associated isoprenylated plant protein 32-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: symplast (GO:0055044);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101470.graph_c0",83,1.99,93,2.06,71,1.84,415,10.3,464,13.1,514,13.21,3.86e-43,2.161147252,"up","--","--","Cellular Component: exocyst (GO:0000145);; Biological Process: exocytosis (GO:0006887);; ","K19986|0.0e+00|oeu:111389087|K19986 exocyst complex component 8 | (RefSeq) exocyst complex component EXO84C","[U]","Intracellular trafficking, secretion, and vesicular transport ","Exocyst component 84 C-terminal","Exocyst complex component EXO84C OS=Arabidopsis thaliana OX=3702 GN=EXO84C PE=2 SV=1","Exocyst complex subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25147 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","exocyst complex component EXO84C [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c117359.graph_c2",116,4.02,169,5.5,186,6.65,41,1.19,41,1.63,44,1.36,2.2e-19,-2.191961789,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication (GO:0006260);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; ","K10740|4.2e-52|oeu:111404055|K10740 replication factor A3 | (RefSeq) replication protein A 14 kDa subunit B","--","--","Replication factor A protein 3","Replication protein A 14 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA3B PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07823 PE=3 SV=1","S","Function unknown","replication protein A 14 kDa subunit B [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)","DNA replication (ko03030);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430);; Homologous recombination (ko03440)"]
["c110372.graph_c0",52,2.23,103,5.25,55,2.97,24,2.41,17,2,19,1.79,5.97e-09,-2.048414478,"down","--","--","--","K20029|6.3e-16|oeu:111374753|K20029 palmitoyltransferase ZDHHC3/7/25 [EC:2.3.1.225] | (RefSeq) probable protein S-acyltransferase 16","--","--","--","--","--","--","--","uncharacterized protein LOC111367011 [Olea europaea var. sylvestris]","--","--"]
["c104966.graph_c1",4,2.56,0,0,0,0,27,15.48,37,26.24,27,15.7,4.65e-07,3.499879317,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: cellulase activity (GO:0008810);; Biological Process: cellulose catabolic process (GO:0030245);; ","K01179|1.6e-11|sbi:8082678|K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) endoglucanase 8","--","--","Glycosyl hydrolase family 9","Endoglucanase OS=Phaseolus vulgaris OX=3885 PE=2 SV=2","Endoglucanase OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_007022 PE=3 SV=1","G","Carbohydrate transport and metabolism","endoglucanase-like isoform X1 [Camellia sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Starch and sucrose metabolism (ko00500)"]
["c79657.graph_c0",39,3.97,52,4.98,41,4.28,14,1.42,13,1.51,8,0.81,2.47e-07,-2.122871519,"down","--","--","--","--","--","--","--","--","S-crystallin like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02155 PE=4 SV=1","--","--","S-crystallin like [Actinidia chinensis var. chinensis]","--","--"]
["c116825.graph_c0",3052,105.19,3134,102,2971,107,893,32.64,891,37.07,1047,37.97,1.03e-220,-2.015476756,"down","--","--","Cellular Component: Golgi membrane (GO:0000139);; Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K20855|3.0e-194|oeu:111372294|K20855 beta-1,3-galactosyltransferase 1/2/3/4/5/7/8 [EC:2.4.1.-] | (RefSeq) probable beta-1,3-galactosyltransferase 2","[G]","Carbohydrate transport and metabolism ","Galactosyltransferase;; Domain of unknown function (DUF4094)","Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=B3GALT2 PE=2 SV=1","Hexosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29999 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable beta-1,3-galactosyltransferase 2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c113619.graph_c2",1683,66.43,1890,73.31,1740,72.9,153,16.69,128,14.37,119,7.93,0,-4.040422219,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96454.graph_c0",784,51.64,849,55.91,783,54.3,406,22,434,25.73,404,21.68,1.5e-37,-1.272421028,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K15121|3.1e-191|oeu:111406252|K15121 solute carrier family 25, member 44 | (RefSeq) solute carrier family 25 member 44-like","[C]","Energy production and conversion ","Mitochondrial carrier protein","Probable mitochondrial adenine nucleotide transporter BTL3 OS=Arabidopsis thaliana OX=3702 GN=At5g64970 PE=2 SV=1","Putative solute carrier family 25 member 44-like OS=Davidia involucrata OX=16924 GN=Din_007759 PE=3 SV=1","C","Energy production and conversion","solute carrier family 25 member 44-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c117780.graph_c1",16,0.46,23,0.4,18,0.36,193,4.2,225,5.84,289,7.2,1.18e-34,3.242789214,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K03006|4.5e-101|adu:107466525|K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Integrase core domain;; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2082 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","RNA polymerase (ko03020)"]
["c108634.graph_c0",289,11.65,288,11.13,254,10.62,815,33.83,717,34.14,854,35.05,4.75e-32,1.194549682,"up","[R]","General function prediction only ","Cellular Component: integral component of membrane (GO:0016021);; ","K23541|5.6e-14|ppp:112276856|K23541 Ca2+/H+ antiporter, TMEM165/GDT1 family | (RefSeq) GDT1-like protein 3","[S]","Function unknown ","Uncharacterized protein family UPF0016;; Uncharacterized protein family UPF0016","Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71-HL PE=1 SV=2","GDT1 family protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09139 PE=3 SV=1","L","Replication, recombination and repair","protein PAM71-homolog, chloroplastic [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c89364.graph_c0",19,2.09,20,2.07,31,3.49,3,0.34,15,1.93,10,1.12,0.006782867,-1.501364874,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06480 PE=4 SV=1","--","--","uncharacterized protein LOC111401019 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106831.graph_c0",319,10.33,313,9.8,238,7.88,1158,38.14,1107,42.19,1234,40.87,7.2e-65,1.683469746,"up","--","--","Cellular Component: Golgi membrane (GO:0000139);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: pectin biosynthetic process (GO:0045489);; Molecular Function: polygalacturonate 4-alpha-galacturonosyltransferase activity (GO:0047262);; Biological Process: cell wall organization (GO:0071555);; ","K13648|0.0e+00|oeu:111369784|K13648 alpha-1,4-galacturonosyltransferase [EC:2.4.1.43] | (RefSeq) galacturonosyltransferase 8-like","--","--","Glycosyl transferase family 8","Galacturonosyltransferase 8 OS=Arabidopsis thaliana OX=3702 GN=GAUT8 PE=1 SV=1","Hexosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13354 PE=3 SV=1","G","Carbohydrate transport and metabolism","galacturonosyltransferase 8-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c104470.graph_c0",2,0.06,3,0.09,3,0.1,28,0.89,27,0.98,30,0.94,8.69e-06,2.729804211,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; ","K09527|1.1e-264|oeu:111409421|K09527 DnaJ homolog subfamily C member 7 | (RefSeq) inactive TPR repeat-containing thioredoxin TTL3-like","[R]","General function prediction only ","Tetratricopeptide repeat;; Tetratricopeptide repeat;; TPR repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Bacterial transcriptional activator domain","Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis thaliana OX=3702 GN=TTL3 PE=1 SV=2","TPR_REGION domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004104mg PE=4 SV=1","S","Function unknown","inactive TPR repeat-containing thioredoxin TTL3-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","--"]
["c80701.graph_c0",16,3.1,2,0.36,0,0,86,17.53,167,38.78,163,33.06,0.003799363,2.732499585,"up","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to heat (GO:0009408);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to salicylic acid (GO:0009751);; Biological Process: response to organic substance (GO:0010033);; Biological Process: heat acclimation (GO:0010286);; Biological Process: response to organic cyclic compound (GO:0014070);; Cellular Component: cell junction (GO:0030054);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to drug (GO:0042493);; Biological Process: response to antibiotic (GO:0046677);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: symplast (GO:0055044);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K03860|3.7e-27|nnu:104608881|K03860 phosphatidylinositol N-acetylglucosaminyltransferase subunit Q | (RefSeq) N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1-like","--","--","Gibberellin regulated protein","Protein RSI-1 OS=Solanum lycopersicum OX=4081 GN=RSI-1 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24645 PE=3 SV=1","S","Function unknown","hypothetical protein CDL12_24645 [Handroanthus impetiginosus]","biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044)","Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (ko00563)"]
["c103837.graph_c0",42,1.65,39,1.48,28,1.13,22,0.87,8,0.37,16,0.64,0.00050875,-1.495620331,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109400.graph_c1",373,20.54,354,18.34,330,17.25,1024,46.34,876,46.25,1109,49.55,7.23e-36,1.180275705,"up","[F]","Nucleotide transport and metabolism ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: purine nucleoside catabolic process (GO:0006152);; Biological Process: pyrimidine nucleoside metabolic process (GO:0006213);; Biological Process: uridine catabolic process (GO:0006218);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: purine nucleosidase activity (GO:0008477);; Biological Process: catabolic process (GO:0009056);; Biological Process: nucleoside metabolic process (GO:0009116);; Biological Process: ribonucleoside metabolic process (GO:0009119);; Biological Process: nucleoside catabolic process (GO:0009164);; Biological Process: cellular process (GO:0009987);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Biological Process: aromatic compound catabolic process (GO:0019439);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: nucleobase-containing compound catabolic process (GO:0034655);; Biological Process: nucleobase-containing small molecule catabolic process (GO:0034656);; Biological Process: purine nucleoside metabolic process (GO:0042278);; Biological Process: ribonucleoside catabolic process (GO:0042454);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular nitrogen compound catabolic process (GO:0044270);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule catabolic process (GO:0044282);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: uridine nucleosidase activity (GO:0045437);; Biological Process: uridine metabolic process (GO:0046108);; Biological Process: pyrimidine ribonucleoside metabolic process (GO:0046131);; Biological Process: pyrimidine ribonucleoside catabolic process (GO:0046133);; Biological Process: pyrimidine nucleoside catabolic process (GO:0046135);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: heterocycle catabolic process (GO:0046700);; Molecular Function: adenosine nucleosidase activity (GO:0047622);; Molecular Function: inosine nucleosidase activity (GO:0047724);; Molecular Function: ribosylpyrimidine nucleosidase activity (GO:0050263);; Biological Process: nucleobase-containing small molecule metabolic process (GO:0055086);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: purine-containing compound metabolic process (GO:0072521);; Biological Process: purine-containing compound catabolic process (GO:0072523);; Biological Process: pyrimidine-containing compound metabolic process (GO:0072527);; Biological Process: pyrimidine-containing compound catabolic process (GO:0072529);; Molecular Function: xanthosine nucleotidase activity (GO:0072585);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: carbohydrate derivative catabolic process (GO:1901136);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound catabolic process (GO:1901361);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: glycosyl compound metabolic process (GO:1901657);; Biological Process: glycosyl compound catabolic process (GO:1901658);; ","K01240|5.2e-97|oeu:111388437|K01240 uridine nucleosidase [EC:3.2.2.3] | (RefSeq) uridine nucleosidase 1-like","[F]","Nucleotide transport and metabolism ","Inosine-uridine preferring nucleoside hydrolase","Uridine nucleosidase 1 OS=Arabidopsis thaliana OX=3702 GN=URH1 PE=1 SV=2","Putative uridine nucleosidase 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_33528 PE=3 SV=1","F","Nucleotide transport and metabolism","uridine nucleosidase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Pyrimidine metabolism (ko00240);; Nicotinate and nicotinamide metabolism (ko00760)"]
["c115303.graph_c0",429,24.12,374,19.35,390,23.07,2459,137.81,2284,148.08,2573,146.09,8.01e-186,2.288467221,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02930|1.9e-199|oeu:111391733|K02930 large subunit ribosomal protein L4e | (RefSeq) 60S ribosomal protein L4-1","[A]","RNA processing and modification ","Ribosomal protein L4/L1 family;; 60S ribosomal protein L4 C-terminal domain","60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1","Ribosomal protein RPL1/RPL2/RL4L4 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23759 PE=3 SV=1","A","RNA processing and modification","60S ribosomal protein L4-1 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c92414.graph_c0",277,38.17,304,39.35,201,28.46,39,5.5,23,3.72,49,6.86,4.05e-45,-3.099683877,"down","--","--","Molecular Function: cysteine-type endopeptidase inhibitor activity (GO:0004869);; ","--","--","--","Cystatin domain;; Aspartic acid proteinase inhibitor","Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=CYS6 PE=1 SV=2","Cysteine proteinase inhibitor OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g038300 PE=3 SV=1","G","Carbohydrate transport and metabolism","cysteine proteinase inhibitor A-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c105547.graph_c0",238,15.4,230,14.39,190,12.25,104,7.02,72,5.42,102,6.85,2.94e-18,-1.555070202,"down","[VI]","--","Molecular Function: glutathione peroxidase activity (GO:0004602);; Biological Process: response to oxidative stress (GO:0006979);; ","K00432|1.5e-26|ats:109732425|K00432 glutathione peroxidase [EC:1.11.1.9] | (RefSeq) LOC109732425; probable phospholipid hydroperoxide glutathione peroxidase","[O]","Posttranslational modification, protein turnover, chaperones ","--","Probable phospholipid hydroperoxide glutathione peroxidase OS=Solanum lycopersicum OX=4081 GN=GPXle-1 PE=2 SV=1","Glutathione peroxidase OS=Coffea canephora OX=49390 GN=GSCOC_T00030202001 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable phospholipid hydroperoxide glutathione peroxidase [Coffea arabica]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754)","Glutathione metabolism (ko00480);; Arachidonic acid metabolism (ko00590)"]
["c115664.graph_c0",216,21.73,222,20.68,171,17.55,41,4.17,55,6.56,38,3.98,4.39e-30,-2.46300462,"down","--","--","--","--","--","--","Universal stress protein family","--","Usp domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015230mg PE=4 SV=1","S","Function unknown","universal stress protein PHOS32-like [Olea europaea var. sylvestris]","--","--"]
["c109736.graph_c0",436,11.41,436,10.93,406,11.09,1112,31.38,1017,32.97,1137,31.78,1.11e-32,1.028807545,"up","[P]","Inorganic ion transport and metabolism ","Cellular Component: membrane (GO:0016020);; Biological Process: metal ion transport (GO:0030001);; Molecular Function: metal ion transmembrane transporter activity (GO:0046873);; Biological Process: transmembrane transport (GO:0055085);; ","--","--","--","CorA-like Mg2+ transporter protein","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13545 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105175671 [Sesamum indicum]","cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215)","--"]
["c91413.graph_c0",134,5.87,118,4.89,114,5.14,361,16.17,280,14.37,365,16.27,3.86e-13,1.12401132,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K20291|1.8e-08|soe:110804424|K20291 conserved oligomeric Golgi complex subunit 4 | (RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_018950 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At3g13150-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c102722.graph_c1",39,4.25,32,3.61,32,3.35,154,11.65,139,13.7,103,8.4,4.97e-09,1.596485877,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: peptide-methionine (S)-S-oxide reductase activity (GO:0008113);; ","K07304|5.2e-90|nsy:104228962|K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] | (RefSeq) peptide methionine sulfoxide reductase","[O]","Posttranslational modification, protein turnover, chaperones ","Peptide methionine sulfoxide reductase","Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum OX=4081 GN=E4 PE=3 SV=1","Protein-methionine-S-oxide reductase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_036310 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","unnamed protein product [Coffea canephora]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c105788.graph_c0",13,0.53,5,0.19,3,0.13,124,5.36,121,5.38,149,6.1,5.6e-23,3.741946056,"up","--","--","--","--","--","--","BRO1-like domain","--","BRO1 domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_004542 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC114311503 isoform X1 [Camellia sinensis]","--","--"]
["c114158.graph_c0",7,0.26,6,0.21,3,0.1,127,3.62,132,4.08,147,4.18,3.2e-25,4.138575583,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K11498|0.0e+00|oeu:111377815|K11498 centromeric protein E | (RefSeq) kinesin-like protein NACK1","[Z]","Cytoskeleton ","Kinesin motor domain;; Domain of unknown function (DUF3490);; Microtubule binding","Kinesin-like protein NACK1 OS=Nicotiana tabacum OX=4097 GN=NACK1 PE=1 SV=1","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29883 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein NACK1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c117729.graph_c0",312,9.69,361,12.3,315,9.22,96,2.29,95,2.6,112,2.27,1.48e-40,-2.015135917,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K12447|1.2e-34|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Zinc knuckle;; gag-polypeptide of LTR copia-type;; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Copia LTR rider OS=Trifolium pratense OX=57577 GN=L195_g019651 PE=4 SV=1","T","Signal transduction mechanisms","copia LTR rider [Trifolium pratense]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c96218.graph_c0",129,11.7,130,11.12,77,7.17,30,2.79,30,3.19,48,4.43,3.58e-12,-1.918805407,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09286|8.9e-98|oeu:111389555|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor RAP2-13-like","--","--","AP2 domain","Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana OX=3702 GN=RAP2-4 PE=1 SV=1","AP2/ERF domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08400 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor RAP2-13-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c99195.graph_c0",232,9.47,251,9.69,249,10.46,155,6.42,109,5.28,115,4.79,9.48e-14,-1.263697812,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111400329 [Olea europaea var. sylvestris]","--","--"]
["c117944.graph_c1",81,1.38,69,1.2,79,1.31,173,3.81,215,5,248,4.98,2.16e-08,1.135960013,"up","[L]","Replication, recombination and repair ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: ribonuclease III activity (GO:0004525);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: RISC complex (GO:0016442);; Biological Process: production of siRNA involved in RNA interference (GO:0030422);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; ","K11592|0.0e+00|oeu:111404196|K11592 endoribonuclease Dicer [EC:3.1.26.-] | (RefSeq) dicer-like protein 4 isoform X1","[A]","RNA processing and modification ","Ribonuclease III domain;; Dicer dimerisation domain;; Ribonuclease-III-like;; Helicase conserved C-terminal domain;; DEAD/DEAH box helicase;; Type III restriction enzyme, res subunit;; PAZ domain;; S-Ribosylhomocysteinase (LuxS)","Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000153mg PE=3 SV=1","A","RNA processing and modification","dicer-like protein 4 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c101983.graph_c0",44,2.91,22,1.45,23,1.99,12,0.69,14,1.14,11,1.15,0.001743435,-1.486806561,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K10268|4.8e-15|aof:109825399|K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 20-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2571 PE=4 SV=1","T","Signal transduction mechanisms","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c105210.graph_c1",12,0.89,11,0.74,16,1.18,106,7.86,79,6.71,99,7.29,8.42e-13,2.451127932,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99189.graph_c1",366,22.86,411,24.28,415,26.61,29,2.09,24,1.87,31,2.04,3.22e-92,-4.105125679,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05543 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase IRK [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c90031.graph_c1",152,22.34,176,24.29,164,24.67,71,10.69,35,6.04,54,8.07,1.32e-17,-1.922950405,"down","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: response to unfolded protein (GO:0006986);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: heat shock protein binding (GO:0031072);; Biological Process: cellular response to unfolded protein (GO:0034620);; Biological Process: protein refolding (GO:0042026);; Molecular Function: protein folding chaperone (GO:0044183);; Molecular Function: unfolded protein binding (GO:0051082);; Biological Process: chaperone cofactor-dependent protein refolding (GO:0051085);; Molecular Function: misfolded protein binding (GO:0051787);; ","K03283|3.5e-40|oeu:111382731|K03283 heat shock 70kDa protein 1/2/6/8 | (RefSeq) heat shock cognate 70 kDa protein-like","[O]","Posttranslational modification, protein turnover, chaperones ","--","Heat shock 70 kDa protein 4 OS=Arabidopsis thaliana OX=3702 GN=HSP70-4 PE=1 SV=1","Putative heat shock cognate 70 kDa protein OS=Helianthus annuus OX=4232 GN=HSP7C PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","heat shock cognate 70 kDa protein-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)","Spliceosome (ko03040);; Protein processing in endoplasmic reticulum (ko04141);; Endocytosis (ko04144)"]
["c113195.graph_c2",171,3.79,174,3.65,150,3.38,91,2.19,85,2.35,97,2.14,2.86e-10,-1.169709333,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K08869|4.4e-22|cre:CHLREDRAFT_165812|K08869 aarF domain-containing kinase | (RefSeq) predicted protein","[O]","Posttranslational modification, protein turnover, chaperones ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1","Putative transcription factor DIVARICATA-like OS=Solanum chacoense OX=4108 PE=4 SV=1","K","Transcription","transcription factor MYBS1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c92216.graph_c0",2,0.2,5,0.48,1,0.11,28,2.84,37,4.47,54,5.54,7.62e-08,3.183602541,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18127 PE=4 SV=1","--","--","hypothetical protein CDL12_18127 [Handroanthus impetiginosus]","--","--"]
["c102133.graph_c0",3,0.34,2,0.35,5,0.66,42,4.92,44,6.01,57,6.63,2.27e-09,3.200537711,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c80417.graph_c0",4,1.88,8,3.46,3,1.41,26,12.53,21,11.68,21,9.99,0.004687301,1.6842821,"up","--","--","Molecular Function: protein phosphatase inhibitor activity (GO:0004864);; Biological Process: defense response (GO:0006952);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Molecular Function: abscisic acid binding (GO:0010427);; Molecular Function: signaling receptor activity (GO:0038023);; ","--","--","--","Pathogenesis-related protein Bet v 1 family","Major allergen Pru ar 1 OS=Prunus armeniaca OX=36596 PE=1 SV=1","Putative major allergen Pru ar 1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_046911 PE=3 SV=1","S","Function unknown","major allergen Pru ar 1-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089)","--"]
["c112394.graph_c0",547,15.24,514,13.69,478,13.49,1754,49.84,1526,49.86,1714,48.58,3.74e-66,1.372838526,"up","--","--","--","--","--","--","--","--","TPR_REGION domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001061 PE=4 SV=1","S","Function unknown","hypothetical protein F0562_001061 [Nyssa sinensis]","--","--"]
["c104142.graph_c0",465,21.98,532,23.79,482,23.5,347,16.88,269,14.97,302,14.61,7.3e-18,-1.007492621,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K20291|8.7e-08|aip:107622926|K20291 conserved oligomeric Golgi complex subunit 4 | (RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like isoform X1","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26905 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020)","--"]
["c110851.graph_c1",43,1.61,65,2.5,24,1.18,125,4.77,135,6.29,141,4.68,3.87e-06,1.268894017,"up","[R]","General function prediction only ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mitochondrion organization (GO:0007005);; ","K17681|2.9e-215|sind:105166820|K17681 ATPase family AAA domain-containing protein 3A/B | (RefSeq) ATPase family AAA domain-containing protein 3-B","[O]","Posttranslational modification, protein turnover, chaperones ","Domain of unknown function (DUF3523);; ATPase family associated with various cellular activities (AAA);; AAA ATPase domain;; Domain of unknown function (DUF3523)","Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1","AAA+-type ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03754 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","AAA+-type ATPase [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c80094.graph_c0",0,0,0,0,0,0,31,1.68,23,1.41,31,1.67,1.95e-08,4.768790334,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a021565mg PE=4 SV=1","S","Function unknown","U-box domain-containing protein 25 [Olea europaea var. sylvestris]","--","--"]
["c79699.graph_c0",17,9.45,16,8.59,15,9.08,48,36.57,44,30.55,49,28,0.002402308,1.183063741,"up","[E]","Amino acid transport and metabolism ","Molecular Function: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity (GO:0003871);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: methionine biosynthetic process (GO:0009086);; ","K00549|7.6e-24|oeu:111399792|K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] | (RefSeq) 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase-like isoform X1","[E]","Amino acid transport and metabolism ","Cobalamin-independent synthase, N-terminal domain","5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0623900 PE=2 SV=1","5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase OS=Triticum aestivum OX=4565 PE=3 SV=1","E","Amino acid transport and metabolism","5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Cysteine and methionine metabolism (ko00270);; Selenocompound metabolism (ko00450);; Biosynthesis of amino acids (ko01230)"]
["c105810.graph_c0",20,6.66,23,7.06,25,4.23,76,20.1,48,9.3,85,26.28,0.000267843,1.24367312,"up","--","--","Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: mitochondrial intermembrane space (GO:0005758);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: chaperone-mediated protein transport (GO:0072321);; ","K17781|2.4e-21|oeu:111382394|K17781 mitochondrial import inner membrane translocase subunit TIM13 | (RefSeq) mitochondrial import inner membrane translocase subunit Tim13-like","--","--","Tim10/DDP family zinc finger","Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM13 PE=3 SV=2","Mitochondrial import inner membrane translocase subunit OS=Mikania micrantha OX=192012 GN=E3N88_30670 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import inner membrane translocase subunit Tim13-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c111353.graph_c1",181,4.83,128,3.29,111,3.05,80,2.15,75,2.35,92,2.37,1.38e-06,-1.074877618,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; ","K13412|3.8e-169|oeu:111399769|K13412 calcium-dependent protein kinase [EC:2.7.11.1] | (RefSeq) calcium-dependent protein kinase 1-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Lipopolysaccharide kinase (Kdo/WaaP) family;; EF hand;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; EF hand;; Cytoskeletal-regulatory complex EF hand;; Secreted protein acidic and rich in cysteine Ca binding region;; Caleosin related protein","Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CPK1 PE=1 SV=1","Calcium-dependent protein kinase 26-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_03212 PE=4 SV=1","T","Signal transduction mechanisms","calcium-dependent protein kinase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c95524.graph_c1",23,2.92,17,2,16,2.03,58,7.03,59,8.33,46,5.16,0.001656067,1.182491864,"up","[E]","Amino acid transport and metabolism ","Molecular Function: catalytic activity (GO:0003824);; Biological Process: biosynthetic process (GO:0009058);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","K15849|1.0e-43|oeu:111390067|K15849 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [EC:2.6.1.1 2.6.1.78 2.6.1.79] | (RefSeq) bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase isoform X1","[E]","Amino acid transport and metabolism ","Aminotransferase class I and II","Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase OS=Petunia hybrida OX=4102 PE=1 SV=1","Aminotran_1_2 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005497mg PE=3 SV=1","E","Amino acid transport and metabolism","bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960);; Biosynthesis of amino acids (ko01230)"]
["c108515.graph_c0",231,6.38,188,5.76,164,3.85,533,9.98,611,14.67,708,17.66,3.23e-22,1.338818271,"up","--","--","Molecular Function: inorganic anion exchanger activity (GO:0005452);; Cellular Component: integral component of membrane (GO:0016021);; ","K24194|2.9e-276|oeu:111368109|K24194 boron transporter | (RefSeq) boron transporter 1-like","[P]","Inorganic ion transport and metabolism ","HCO3- transporter family;; HCO3- transporter family;; HCO3- transporter family","Probable boron transporter 2 OS=Arabidopsis thaliana OX=3702 GN=BOR2 PE=2 SV=1","Putative boron transporter 2 OS=Davidia involucrata OX=16924 GN=Din_018978 PE=3 SV=1","P","Inorganic ion transport and metabolism","boron transporter 1-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111910.graph_c0",30,2.75,7,0.55,17,1.12,60,5.73,57,5.13,75,5.84,0.000375056,1.431328529,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K15333|4.6e-72|nsy:104224633|K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) uncharacterized protein LOC104224633","--","--","Subtilase family;; Fibronectin type-III domain;; Peptidase inhibitor I9","Subtilisin-like protease SBT3 OS=Solanum lycopersicum OX=4081 GN=sbt3 PE=1 SV=1","Tripeptidyl-peptidase II OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06232 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","subtilisin-like protease SBT1.9 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c116271.graph_c1",210,14.66,306,20.26,233,16.5,872,61.8,1170,95.14,1161,82.13,2.04e-38,1.773303745,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09872|2.6e-150|oeu:111378025|K09872 aquaporin PIP | (RefSeq) aquaporin PIP2-1-like","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Aquaporin PIP2-1 OS=Arabidopsis thaliana OX=3702 GN=PIP2-1 PE=1 SV=1","Aquaporin PIP2-1 OS=Capsicum chinense OX=80379 GN=BC332_23060 PE=3 SV=1","P","Inorganic ion transport and metabolism","aquaporin PIP2-1-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c117216.graph_c0",100,6.55,122,8.76,126,9.26,40,4.4,54,6.2,57,4.29,7.42e-10,-1.503003822,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98827.graph_c0",1,0.08,1,0.07,2,0.15,90,5.8,120,9.24,133,8.81,1.84e-20,5.360628325,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027699001 PE=4 SV=1","S","Function unknown","uncharacterized protein At4g00950-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106795.graph_c2",130,4.67,125,4.22,110,4.1,400,14.75,457,19.18,541,19.84,4.48e-27,1.604843183,"up","[R]","General function prediction only ","Molecular Function: protein binding (GO:0005515);; ","K03549|3.3e-28|csat:104769726|K03549 KUP system potassium uptake protein | (RefSeq) potassium transporter 8-like isoform X1","--","--","NHL repeat","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042820 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111395562 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c86060.graph_c0",2,0.26,0,0,3,0.41,35,4.82,28,4.34,34,4.74,2.15e-07,3.386215582,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","--","--","--","--","Glyoxalase-like domain;; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;; Glyoxalase-like domain","--","VOC domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_038628 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375719 [Olea europaea var. sylvestris]","--","--"]
["c99472.graph_c0",36,3.68,36,3.47,39,4.09,8,0.84,5,0.6,6,0.62,1.4e-08,-2.687897909,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97155.graph_c0",44,4.04,43,4.06,43,4.67,115,12,133,16.09,105,11.06,1.86e-05,1.107400266,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c86754.graph_c0",0,0,0,0,0,0,165,9.14,265,16.82,262,14.44,3.88e-25,7.413516343,"up","[IQR]","--","--","K09841|1.4e-70|aof:109848475|K09841 xanthoxin dehydrogenase [EC:1.1.1.288] | (RefSeq) zerumbone synthase","[R]","General function prediction only ","Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015963 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","secoisolariciresinol dehydrogenase-like [Sesamum indicum]","--","Carotenoid biosynthesis (ko00906)"]
["c112720.graph_c1",49,12.83,34,7.43,43,9.71,147,5,129,4.48,131,3.92,5.21e-08,1.345514066,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107269.graph_c0",4348,66.93,4667,68.08,4251,67.51,2888,45.44,2280,41.09,2759,43.23,1.6e-70,-1.066935397,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: RNA processing (GO:0006396);; Biological Process: regulation of translation (GO:0006417);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid stroma (GO:0009532);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: plastid organization (GO:0009657);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: posttranscriptional regulation of gene expression (GO:0010608);; Biological Process: positive regulation of gene expression (GO:0010628);; Biological Process: cellular component organization (GO:0016043);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Biological Process: chloroplast RNA processing (GO:0031425);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: positive regulation of cellular protein metabolic process (GO:0032270);; Biological Process: regulation of cellular amide metabolic process (GO:0034248);; Biological Process: positive regulation of cellular amide metabolic process (GO:0034250);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: positive regulation of protein metabolic process (GO:0051247);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3","Smr domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013465 PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At4g16390, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)","--"]
["c37565.graph_c0",57,4.46,51,3.76,37,2.97,6,0.48,4,0.37,6,0.48,2.08e-12,-3.277617755,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108788.graph_c0",92,3.4,93,3.29,97,3.84,338,12.52,310,12.26,358,13.38,1.43e-21,1.499822075,"up","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; ","K19892|1.7e-235|oeu:111407353|K19892 glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 4-like","--","--","Glycosyl hydrolases family 17;; X8 domain","Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1","Glucan endo-1,3-beta-D-glucosidase OS=Davidia involucrata OX=16924 GN=Din_005877 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-glucosidase 4-like, partial [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c97813.graph_c0",0,0,0,0,0,0,29,2.04,32,2.5,28,1.88,1.01e-08,4.838213472,"up","--","--","Molecular Function: N-acetyltransferase activity (GO:0008080);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","N-acetyltransferase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g01160 PE=4 SV=1","--","--","uncharacterized protein LOC111400074 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102586.graph_c0",2,0.05,3,0.07,3,0.08,87,1.53,126,2.82,150,2.77,9.32e-22,4.767230378,"up","[L]","Replication, recombination and repair ","Molecular Function: chromatin binding (GO:0003682);; Molecular Function: DNA (cytosine-5-)-methyltransferase activity (GO:0003886);; Cellular Component: nucleus (GO:0005634);; ","K00558|0.0e+00|oeu:111402842|K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] | (RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like","--","--","C-5 cytosine-specific DNA methylase;; Chromo (CHRromatin Organisation MOdifier) domain;; BAH domain","DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana OX=3702 GN=CMT2 PE=2 SV=3","Cytosine-specific methyltransferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_27524 PE=3 SV=1","B","Chromatin structure and dynamics","DNA (cytosine-5)-methyltransferase CMT2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Cysteine and methionine metabolism (ko00270)"]
["c113744.graph_c0",89,7.61,109,8.52,71,5.41,53,4.47,56,5.18,55,4.69,7.99e-05,-1.010477536,"down","--","--","Cellular Component: protein phosphatase type 2A complex (GO:0000159);; Biological Process: signal transduction (GO:0007165);; Molecular Function: protein phosphatase regulator activity (GO:0019888);; ","K11584|1.1e-24|zju:107431957|K11584 serine/threonine-protein phosphatase 2A regulatory subunit B' | (RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X1","[T]","Signal transduction mechanisms ","Protein phosphatase 2A regulatory B subunit (B56 family)","Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana OX=3702 GN=B'GAMMA PE=1 SV=2","Serine/threonine protein phosphatase 2A regulatory subunit OS=Malus domestica OX=3750 GN=DVH24_004706 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform isoform X2 [Ziziphus jujuba]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: molecular function regulator (GO:0098772)","mRNA surveillance pathway (ko03015)"]
["c108468.graph_c0",430,27.2,412,24.64,362,24.07,217,13.88,239,17.67,237,15.84,3.5e-18,-1.110696558,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a0109492mg PE=4 SV=1","--","--","uncharacterized protein LOC111398590 isoform X2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94184.graph_c0",24,1.15,51,2.31,47,2.32,2,0.1,0,0,4,0.2,8.85e-12,-4.119399619,"down","--","--","Molecular Function: actin binding (GO:0003779);; Cellular Component: cytoskeleton (GO:0005856);; ","K05759|1.8e-21|ats:109768398|K05759 profilin | (RefSeq) LOC109768398; profilin","[Z]","Cytoskeleton ","Profilin","--","Profilin OS=Anthurium amnicola OX=1678845 GN=PROF_0 PE=3 SV=1","Z","Cytoskeleton","Profilin conserved site domain-containing protein [Rozella allomycis CSF55]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c113276.graph_c0",5,0.11,0,0,0,0,66,1.47,83,2.12,97,2.16,3.77e-16,4.694483021,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99929.graph_c0",269,15.35,254,12.61,292,19.28,116,6.84,92,6.68,105,6.34,1.12e-24,-1.695292965,"down","--","--","Molecular Function: ribose-5-phosphate isomerase activity (GO:0004751);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: pentose-phosphate shunt, non-oxidative branch (GO:0009052);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; ","K01807|2.9e-59|oeu:111392528|K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] | (RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1","[G]","Carbohydrate transport and metabolism ","--","Probable ribose-5-phosphate isomerase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI4 PE=2 SV=1","Ribose-5-phosphate isomerase OS=Nicotiana attenuata OX=49451 GN=RPI4 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable ribose-5-phosphate isomerase 4, chloroplastic isoform X4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226)","Pentose phosphate pathway (ko00030);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c109241.graph_c1",245,11.93,175,7.04,131,5.43,427,19.64,499,24.51,574,24.61,5.99e-11,1.117147271,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K18878|4.4e-07|cann:107866053|K18878 BHLH transcription factor Upa20 | (RefSeq) Upa20; transcription factor bHLH137-like","--","--","Helix-loop-helix DNA-binding domain","bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1","BHLH domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_10072 PE=4 SV=1","K","Transcription","transcription factor bHLH69-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c101471.graph_c0",4,0.13,2,0.09,0,0,91,3.55,112,4.89,125,4.64,2.07e-20,4.933771074,"up","[GI]","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; ","K01051|4.8e-286|oeu:111412383|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) pectinesterase-like","--","--","Pectinesterase;; Plant invertase/pectin methylesterase inhibitor","Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana OX=3702 GN=PME40 PE=2 SV=1","Pectinesterase OS=Nyssa sinensis OX=561372 GN=F0562_021429 PE=3 SV=1","G","Carbohydrate transport and metabolism","pectinesterase-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152)","Pentose and glucuronate interconversions (ko00040)"]
["c96755.graph_c0",45,1.65,40,1.37,34,1.29,88,3.36,117,4.97,116,4.26,5.46e-05,1.093274988,"up","--","--","--","--","--","--","--","FCS-Like Zinc finger 8 OS=Arabidopsis thaliana OX=3702 GN=FLZ8 PE=1 SV=1","FLZ-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18404 PE=3 SV=1","S","Function unknown","protein MARD1-like [Olea europaea var. sylvestris]","--","--"]
["c110882.graph_c0",13,0.36,15,0.4,23,0.7,66,1.96,102,3.52,127,3.76,1.23e-09,2.127140234,"up","--","--","--","--","--","--","--","Uncharacterized protein At1g65710 OS=Arabidopsis thaliana OX=3702 GN=At1g65710 PE=2 SV=1","uncharacterized protein At1g65710-like OS=Nicotiana tabacum OX=4097 GN=LOC107809494 PE=4 SV=1","S","Function unknown","uncharacterized protein At1g65710-like [Olea europaea var. sylvestris]","--","--"]
["c103588.graph_c0",0,0,3,0.56,0,0,16,2.19,23,3.75,19,2.18,5.28e-05,3.122960469,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c78690.graph_c0",408,14.9,360,12.42,338,12.76,1415,53.02,1157,49.46,1447,53.89,2.94e-61,1.531717373,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K23154|9.3e-239|oeu:111400904|K23154 2-hydroxyflavanone C-glucosyltransferase [EC:2.4.1.360] | (RefSeq) UDP-glycosyltransferase 13-like","[GC]","--","--","UDP-glycosyltransferase 13 OS=Mangifera indica OX=29780 GN=CGT PE=1 SV=1","Glycosyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30748 PE=3 SV=1","--","--","UDP-glycosyltransferase 13-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c75796.graph_c2",11,2.54,17,3.66,12,2.82,39,9.23,37,10.05,43,10.08,0.005291239,1.19275963,"up","--","--","Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","protein STRUBBELIG-RECEPTOR FAMILY 6-like OS=Nicotiana tabacum OX=4097 GN=LOC107790703 PE=4 SV=1","T","Signal transduction mechanisms","protein STRUBBELIG-RECEPTOR FAMILY 6 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","--"]
["c115936.graph_c1",881,14.74,827,13.36,745,13.35,336,20.51,307,22.42,330,18.88,7.08e-63,-1.651109393,"down","[L]","Replication, recombination and repair ","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: DNA integration (GO:0015074);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K07393|1.4e-77|soe:110775499|K07393 glutathionyl-hydroquinone reductase [EC:1.8.5.7] | (RefSeq) uncharacterized protein LOC110775499","[R]","General function prediction only ","Retrotransposon gag protein;; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase;; Reverse transcriptase (RNA-dependent DNA polymerase)","RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1","Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44517 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111412594 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c114103.graph_c1",12,0.57,9,0.5,9,0.35,41,1.38,33,1.32,27,1,0.004850539,1.347356967,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K11593|2.1e-99|dct:110097550|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 1A-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; GAG-pre-integrase domain;; Integrase core domain","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3539 PE=4 SV=1","K","Transcription","Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108747.graph_c0",6,0.43,23,2.48,13,1.29,49,3.61,52,4.39,46,3.35,0.000979379,1.423817819,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115827.graph_c0",152,6.76,145,6.6,122,7.87,33,1.69,41,2.6,39,1.99,3.33e-20,-2.174694025,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","--","--","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_041073 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein VITISV_041073 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c112338.graph_c0",7,0.28,7,0.28,2,0.07,42,1.73,44,2.11,53,2.27,1.29e-07,2.604402799,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: positive regulation of growth (GO:0045927);; ","K18081|4.7e-49|bna:106425271|K18081 myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95] | (RefSeq) phosphatidylinositol-3-phosphatase myotubularin-2-like","--","--","Protein of unknown function (DUF668);; Domain of unknown function (DUF3475)","--","uncharacterized protein LOC107770950 OS=Nicotiana tabacum OX=4097 GN=LOC107770950 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111403921 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070)"]
["c101698.graph_c0",0,0,0,0,1,0.04,18,0.69,25,1.1,36,1.37,1.97e-07,4.184427176,"up","--","--","Biological Process: phototropism (GO:0009638);; ","--","--","--","--","Protein PHYTOCHROME KINASE SUBSTRATE 4 OS=Arabidopsis thaliana OX=3702 GN=PKS4 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21027 PE=4 SV=1","S","Function unknown","protein PHYTOCHROME KINASE SUBSTRATE 4 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c98501.graph_c2",7,0.6,3,0.36,8,0.43,69,11.5,62,12.42,53,10.41,3.69e-10,2.849598571,"up","--","--","--","K13691|3.4e-37|oeu:111396662|K13691 pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-] | (RefSeq) UDP-glycosyltransferase 74F2-like","[GC]","--","--","UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana OX=3702 GN=UGT74F2 PE=1 SV=1","Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_010587 PE=4 SV=1","--","--","UDP-glycosyltransferase 74F2-like [Olea europaea var. sylvestris]","--","--"]
["c91551.graph_c0",9,0.68,9,0.65,6,0.47,98,7.63,145,12.94,133,10.3,5.31e-21,3.509050385,"up","--","--","Molecular Function: NAD-dependent histone deacetylase activity (H3-K14 specific) (GO:0032041);; ","K13463|2.3e-20|oeu:111398039|K13463 coronatine-insensitive protein 1 | (RefSeq) coronatine-insensitive protein 1-like","--","--","Nucleoplasmin-like domain","Histone deacetylase HDT1 OS=Glycine max OX=3847 GN=HDT1 PE=2 SV=1","Histone deacetylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08926 PE=4 SV=1","--","--","histone deacetylase HDT1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Plant hormone signal transduction (ko04075)"]
["c106221.graph_c0",22,0.9,37,1.42,44,1.83,7,0.29,8,0.38,17,0.7,6.13e-05,-1.901550294,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c79476.graph_c0",124,8.12,99,6.04,65,4.41,424,29.34,414,32.78,492,33.75,7.88e-29,1.872579063,"up","[M]","Cell wall/membrane/envelope biogenesis ","--","--","--","--","--","Protein CDI OS=Arabidopsis thaliana OX=3702 GN=CDI PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19854 PE=4 SV=1","--","--","protein CDI-like [Olea europaea var. sylvestris]","--","--"]
["c94816.graph_c0",120,8.82,49,3.12,35,2.52,41,2.89,18,1.59,21,1.63,0.000139344,-1.593221515,"down","[S]","Function unknown ","--","K13449|9.5e-29|adu:107468687|K13449 pathogenesis-related protein 1 | (RefSeq) pathogenesis-related protein 1C","[S]","Function unknown ","Cysteine-rich secretory protein family","Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3","SCP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23591 PE=4 SV=1","S","Function unknown","pathogenesis-related protein 1C-like [Olea europaea var. sylvestris]","--","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c98595.graph_c0",20,0.99,13,0.61,19,1.06,45,2.32,88,5.24,91,4.71,5.77e-06,1.715262408,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09419|1.8e-178|oeu:111403714|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat shock factor protein HSF30-like","[K]","Transcription ","HSF-type DNA-binding","Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1","Heat shock transcription factor OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04322 PE=3 SV=1","K","Transcription","heat shock factor protein HSF30-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217);; molecular function: binding (GO:0005488)","--"]
["c115612.graph_c0",560,27.78,707,33.17,554,27.3,3424,193.45,3026,190.64,3428,192.42,2.17e-178,2.115475017,"up","--","--","--","--","--","--","Plant protein 1589 of unknown function (A_thal_3526)","--","PREDICTED: Plant OS=Prunus dulcis OX=3755 GN=ALMOND_2B013119 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111403138 [Olea europaea var. sylvestris]","--","--"]
["c68992.graph_c0",15,2.55,11,1.72,12,2.05,117,20.05,165,32.42,152,25.83,7.67e-22,3.102752027,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Cellular Component: nuclear chromatin (GO:0000790);; Molecular Function: DNA binding (GO:0003677);; Biological Process: chromatin organization (GO:0006325);; Biological Process: chromatin silencing (GO:0006342);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11251|8.4e-73|oeu:111410257|K11251 histone H2A | (RefSeq) histone H2A.1-like","[B]","Chromatin structure and dynamics ","C-terminus of histone H2A;; Core histone H2A/H2B/H3/H4;; Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Histone H2A.1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1","Histone H2A OS=Nicotiana tabacum OX=4097 GN=LOC107814561 PE=3 SV=1","B","Chromatin structure and dynamics","histone H2A.1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane-enclosed lumen (GO:0031974);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c108829.graph_c2",48,13.42,64,16.83,53,15.35,8,2.17,8,2.78,5,1.31,2.65e-13,-3.116661414,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c90893.graph_c0",22,2.11,10,0.91,25,2.47,83,8.17,81,9.13,143,13.98,6.24e-09,2.014711655,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09286|3.0e-26|mtr:MTR_2g101340|K09286 EREBP-like factor | (RefSeq) AP2 domain class transcription factor","--","--","AP2 domain","Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2","AP2/ERF domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_025564 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor ERF039-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c109510.graph_c2",186,30.63,200,30.92,158,26.61,7,1.27,7,1.58,7,1.28,3.93e-45,-4.83912375,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109623.graph_c0",89,4.05,80,3.32,60,3.36,376,14.28,352,15.13,368,13.84,1.06e-30,1.92527742,"up","[IQ]","--","Molecular Function: catalytic activity (GO:0003824);; ","K01054|1.7e-79|oeu:111400547|K01054 acylglycerol lipase [EC:3.1.1.23] | (RefSeq) caffeoylshikimate esterase-like","[I]","Lipid transport and metabolism ","Serine aminopeptidase, S33;; AMP-binding enzyme;; Serine aminopeptidase, S33","2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE14 PE=1 SV=1","Caffeoylshikimate esterase OS=Vitis vinifera OX=29760 GN=CSE_4 PE=4 SV=1","I","Lipid transport and metabolism","caffeoylshikimate esterase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Glycerolipid metabolism (ko00561)"]
["c92680.graph_c0",27,0.99,43,1.49,32,1.21,1,0.04,4,0.17,5,0.19,2.33e-09,-3.322457263,"down","--","--","Molecular Function: ornithine decarboxylase inhibitor activity (GO:0008073);; ","--","[E]","Amino acid transport and metabolism ","--","--","--","--","--","--","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c109418.graph_c0",33,1.92,23,1.27,27,1.62,13,0.76,15,1.01,14,0.82,0.006630315,-1.234199359,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Probable zinc metallopeptidase EGY3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EGY3 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014607001 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","probable zinc metallopeptidase EGY3, chloroplastic [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110020.graph_c0",88,1.96,34,0.75,40,1.15,345,7.34,339,8.36,356,7.62,2.93e-08,2.252611191,"up","[M]","Cell wall/membrane/envelope biogenesis ","Biological Process: nitrogen compound metabolic process (GO:0006807);; Molecular Function: racemase activity, acting on amino acids and derivatives (GO:0036361);; ","--","--","--","Asp/Glu/Hydantoin racemase","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_033457 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","uncharacterized protein LOC105164313 [Sesamum indicum]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","--"]
["c96619.graph_c0",39,2.04,43,2.22,33,1.77,5,0.28,12,0.75,7,0.38,1.5e-07,-2.414341654,"down","--","--","--","--","--","--","PDDEXK-like family of unknown function","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17561 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111407765 [Olea europaea var. sylvestris]","--","--"]
["c72730.graph_c0",44,3.79,33,2.68,30,2.65,0,0,0,0,0,0,3.6e-12,-5.592008097,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111394498 [Olea europaea var. sylvestris]","--","--"]
["c114920.graph_c0",3,0.09,0,0,4,0.11,21,0.52,14,0.39,19,0.46,0.001970781,2.199277851,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: fatty-acyl-CoA reductase (alcohol-forming) activity (GO:0080019);; Molecular Function: alcohol-forming fatty acyl-CoA reductase activity (GO:0102965);; ","K13356|0.0e+00|oeu:111391113|K13356 alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] | (RefSeq) fatty acyl-CoA reductase 2","[I]","Lipid transport and metabolism ","Male sterility protein;; Male sterility protein","Fatty acyl-CoA reductase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FAR2 PE=1 SV=2","Fatty acyl-CoA reductase OS=Nyssa sinensis OX=561372 GN=F0562_015792 PE=3 SV=1","I","Lipid transport and metabolism","fatty acyl-CoA reductase 2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Cutin, suberine and wax biosynthesis (ko00073);; Peroxisome (ko04146)"]
["c91813.graph_c0",9,0.7,13,1.24,5,0.52,51,5.09,67,7.43,56,5.39,1.22e-07,2.26044198,"up","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: ATP binding (GO:0005524);; Biological Process: phospholipid transport (GO:0015914);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase-coupled intramembrane lipid transporter activity (GO:0140326);; ","K14802|1.2e-18|oeu:111380031|K14802 phospholipid-transporting ATPase [EC:7.6.2.1] | (RefSeq) phospholipid-transporting ATPase 1-like","--","--","--","--","Phospholipid-transporting ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05913 PE=3 SV=1","P","Inorganic ion transport and metabolism","phospholipid-transporting ATPase 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c102985.graph_c0",687,24.24,806,27.47,717,25.27,2882,109.1,2418,101.38,2695,112.62,1.58e-93,1.530293202,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812);; Molecular Function: histidine-tRNA ligase activity (GO:0004821);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: tRNA metabolic process (GO:0006399);; Biological Process: translation (GO:0006412);; Biological Process: tRNA aminoacylation for protein translation (GO:0006418);; Biological Process: histidyl-tRNA aminoacylation (GO:0006427);; Biological Process: peptide metabolic process (GO:0006518);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: ligase activity (GO:0016874);; Molecular Function: ligase activity, forming carbon-oxygen bonds (GO:0016875);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: amino acid activation (GO:0043038);; Biological Process: tRNA aminoacylation (GO:0043039);; Biological Process: peptide biosynthetic process (GO:0043043);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular amide metabolic process (GO:0043603);; Biological Process: amide biosynthetic process (GO:0043604);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Molecular Function: catalytic activity, acting on a tRNA (GO:0140101);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K01892|4.4e-90|oeu:111369068|K01892 histidyl-tRNA synthetase [EC:6.1.1.21] | (RefSeq) histidine--tRNA ligase, chloroplastic/mitochondrial","[J]","Translation, ribosomal structure and biogenesis ","Histidyl-tRNA synthetase;; Histidyl-tRNA synthetase;; tRNA synthetase class II core domain (G, H, P, S and T);; Anticodon binding domain","Histidine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g46100 PE=2 SV=1","Histidine--tRNA ligase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005185mg PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","histidine--tRNA ligase, chloroplastic/mitochondrial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c104984.graph_c1",28,13.65,51,22.86,23,11.22,12,6,11,6.35,19,9.37,0.000824582,-1.511505,"down","[L]","Replication, recombination and repair ","Molecular Function: catalytic activity (GO:0003824);; Biological Process: base-excision repair (GO:0006284);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K10773|8.8e-11|ath:AT3G47830|K10773 endonuclease III [EC:4.2.99.18] | (RefSeq) DNA glycosylase superfamily protein","--","--","--","Protein ROS1A OS=Oryza sativa subsp. japonica OX=39947 GN=ROS1A PE=1 SV=2","transcriptional activator DEMETER OS=Juglans regia OX=51240 GN=LOC109015459 PE=3 SV=1","L","Replication, recombination and repair","transcriptional activator DEMETER-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","Base excision repair (ko03410)"]
["c81141.graph_c0",2,0.22,1,0.1,2,0.23,45,5.02,23,2.95,35,3.95,1.02e-07,3.46268185,"up","[V]","Defense mechanisms ","Molecular Function: magnesium ion binding (GO:0000287);; Cellular Component: cytosol (GO:0005829);; Biological Process: dCTP catabolic process (GO:0006253);; Biological Process: DNA protection (GO:0042262);; Molecular Function: dCTP diphosphatase activity (GO:0047840);; ","K16904|1.0e-39|oeu:111408248|K16904 dCTP diphosphatase [EC:3.6.1.12] | (RefSeq) dCTP pyrophosphatase 1-like","--","--","--","--","dCTP pyrophosphatase 1 OS=Citrus sinensis OX=2711 GN=CISIN_1g033069mg PE=4 SV=1","S","Function unknown","dCTP pyrophosphatase 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)","Pyrimidine metabolism (ko00240)"]
["c106373.graph_c0",410,16.88,444,17.32,393,17.32,1414,57.25,1251,62.08,1456,61.98,1.27e-64,1.398643186,"up","[C]","Energy production and conversion ","Molecular Function: FMN binding (GO:0010181);; Molecular Function: 12-oxophytodienoate reductase activity (GO:0016629);; ","K05894|6.2e-165|oeu:111375625|K05894 12-oxophytodienoic acid reductase [EC:1.3.1.42] | (RefSeq) putative 12-oxophytodienoate reductase 11 isoform X1","[CR]","--","NADH:flavin oxidoreductase / NADH oxidase family;; NADH:flavin oxidoreductase / NADH oxidase family","Putative 12-oxophytodienoate reductase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=OPR11 PE=2 SV=1","NADH:flavin oxidoreductase/12-oxophytodienoate reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00164 PE=3 SV=1","C","Energy production and conversion","putative 12-oxophytodienoate reductase 11 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","alpha-Linolenic acid metabolism (ko00592)"]
["c101761.graph_c0",39,3.2,21,1.66,25,2.1,172,14.06,244,23.27,227,18.85,8.3e-23,2.55348813,"up","--","--","--","--","--","--","Neprosin activation peptide","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02114 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111379855 [Olea europaea var. sylvestris]","--","--"]
["c85878.graph_c0",14,1.74,24,2.8,11,1.4,94,11.95,100,14.57,153,19.31,1.8e-13,2.424147239,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[G]","Carbohydrate transport and metabolism ","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_28035 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111371787 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106559.graph_c3",22,1.99,11,0.97,10,0.95,86,7.88,96,10.11,88,8.07,1.32e-10,2.254874171,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; ","--","--","--","bZIP transcription factor","Basic leucine zipper 4 OS=Arabidopsis thaliana OX=3702 GN=BZIP4 PE=1 SV=1","BZIP domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00040079001 PE=4 SV=1","K","Transcription","basic leucine zipper 4-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c98394.graph_c0",54,6.2,29,3.1,39,4.32,168,18.73,172,22.23,239,26.57,9.48e-15,1.883977978,"up","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; ","K13692|3.4e-23|adu:107467498|K13692 UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121] | (RefSeq) UDP-glycosyltransferase 84B1","[GC]","--","--","DIMBOA UDP-glucosyltransferase BX8 OS=Zea mays OX=4577 GN=Bx8 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004350 PE=4 SV=1","--","--","UDP-glycosyltransferase 83A1-like, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c111162.graph_c2",2,0.2,4,0.32,1,0.04,72,5.03,100,7.93,120,8.05,1.86e-18,4.60629148,"up","[S]","Function unknown ","--","--","--","--","Carbohydrate esterase, sialic acid-specific acetylesterase","Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2","SASA domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_035849 PE=4 SV=1","S","Function unknown","probable carbohydrate esterase At4g34215 [Olea europaea var. sylvestris]","--","--"]
["c112981.graph_c0",115,2.93,117,2.92,92,2.44,555,14.72,522,15.78,614,16.22,6.37e-52,2.051122962,"up","[T]","Signal transduction mechanisms ","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; ","K10260|4.8e-17|csl:COCSUDRAFT_23114|K10260 F-box and WD-40 domain protein 7 | (RefSeq) WD40 repeat-like protein","[S]","Function unknown ","U-box domain;; Armadillo/beta-catenin-like repeat","U-box domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=PUB16 PE=2 SV=1","RING-type E3 ubiquitin transferase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002394mg PE=4 SV=1","S","Function unknown","U-box domain-containing protein 16-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Ubiquitin mediated proteolysis (ko04120)"]
["c96761.graph_c0",28,1.33,33,1.52,47,2.3,164,7.98,204,11.37,205,9.93,6.76e-17,2.049181824,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K20359|1.1e-84|oeu:111405094|K20359 PRA1 family protein 1 | (RefSeq) PRA1 family protein F2-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","PRA1 family protein","PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1","PRA1 family protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22962 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","PRA1 family protein F2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112878.graph_c3",59,3.59,51,2.99,55,3.45,0,0,0,0,0,0,1.45e-15,-6.163643065,"down","--","--","--","--","--","--","--","Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0509200 PE=2 SV=1","--","--","--","--","--","--"]
["c98737.graph_c0",0,0,1,0.05,0,0,37,1.7,47,2.51,60,3.35,2.46e-11,5.010243303,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: membrane (GO:0016020);; Molecular Function: kinase activity (GO:0016301);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: cell periphery (GO:0071944);; ","K03164|3.5e-16|cann:107839447|K03164 DNA topoisomerase II [EC:5.6.2.2] | (RefSeq) DNA topoisomerase 2","--","--","--","Probable membrane-associated kinase regulator 2 OS=Arabidopsis thaliana OX=3702 GN=MAKR2 PE=2 SV=1","probable membrane-associated kinase regulator 2 OS=Nicotiana tabacum OX=4097 GN=LOC107800079 PE=4 SV=1","S","Function unknown","probable membrane-associated kinase regulator 2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c115176.graph_c2",415,15.54,424,14.26,489,16.53,1439,59.51,1289,61.26,1535,66.02,4.51e-48,1.351416311,"up","[E]","Amino acid transport and metabolism ","Molecular Function: aminopeptidase activity (GO:0004177);; Molecular Function: metallopeptidase activity (GO:0008237);; Molecular Function: zinc ion binding (GO:0008270);; ","K01267|5.2e-153|oeu:111399459|K01267 aspartyl aminopeptidase [EC:3.4.11.21] | (RefSeq) probable aspartyl aminopeptidase","[E]","Amino acid transport and metabolism ","Aminopeptidase I zinc metalloprotease (M18);; Aminopeptidase I zinc metalloprotease (M18);; M42 glutamyl aminopeptidase","Probable aspartyl aminopeptidase OS=Ricinus communis OX=3988 GN=RCOM_1506700 PE=2 SV=2","Putative aspartyl aminopeptidase isoform X1 OS=Davidia involucrata OX=16924 GN=Din_001455 PE=3 SV=1","E","Amino acid transport and metabolism","probable aspartyl aminopeptidase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","--"]
["c110698.graph_c0",397,19.06,438,19.91,370,17.96,134,6.76,120,7.12,175,8.82,8.54e-39,-1.806640725,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25826 PE=4 SV=1","--","--","uncharacterized protein LOC111397534 [Olea europaea var. sylvestris]","--","--"]
["c100744.graph_c0",1131,68.91,1276,72.8,1114,67.44,733,44.42,619,41.91,811,47.75,6.45e-37,-1.026783677,"down","[L]","Replication, recombination and repair ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: nuclease activity (GO:0004518);; ","--","--","--","Staphylococcal nuclease homologue","Staphylococcal-like nuclease CAN2 OS=Arabidopsis thaliana OX=3702 GN=CAN2 PE=1 SV=1","Micrococcal nuclease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26526 PE=4 SV=1","L","Replication, recombination and repair","staphylococcal-like nuclease CAN2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c84765.graph_c0",249,16.42,279,17.39,295,20.05,145,9.8,128,9.91,149,10.03,8.83e-17,-1.281647704,"down","--","--","--","K08238|2.7e-15|brp:103847104|K08238 xyloglucan 6-xylosyltransferase [EC:2.4.2.39] | (RefSeq) probable xyloglucan 6-xylosyltransferase 3","--","--","LURP-one-related","Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25589 PE=3 SV=1","S","Function unknown","protein LURP-one-related 10-like [Olea europaea var. sylvestris]","--","--"]
["c99722.graph_c1",63,2.09,78,2.43,57,1.95,190,6.37,176,6.73,247,8.23,1.88e-10,1.290343116,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: translation (GO:0006412);; Biological Process: peptide metabolic process (GO:0006518);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: mitochondrial translation (GO:0032543);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: peptide biosynthetic process (GO:0043043);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular amide metabolic process (GO:0043603);; Biological Process: amide biosynthetic process (GO:0043604);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: mitochondrial gene expression (GO:0140053);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","--","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Mitochondrial 28S ribosomal protein S27;; Mitochondrial ATPase expression","Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18236 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At5g01110 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c99981.graph_c0",869,53.92,840,49.88,719,46.84,8332,532.7,7968,580.91,8912,565.35,0,3.052020023,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|2.2e-114|oeu:111385342|K20628 expansin | (RefSeq) expansin-A8-like","--","--","Expansin C-terminal domain","Expansin-A8 OS=Arabidopsis thaliana OX=3702 GN=EXPA8 PE=2 SV=1","Expansin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26167 PE=3 SV=1","S","Function unknown","expansin-A8-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c113482.graph_c0",67,1.39,75,1.63,43,0.7,222,4.07,197,4.11,232,4.41,3.76e-13,1.479659543,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: membrane (GO:0016020);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: obsolete cofactor binding (GO:0048037);; Molecular Function: iron-sulfur cluster binding (GO:0051536);; Molecular Function: metal cluster binding (GO:0051540);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","CASP-like protein 4A3 OS=Arabidopsis thaliana OX=3702 GN=At2g36330 PE=2 SV=1","CASP-like protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_14349 PE=3 SV=1","S","Function unknown","CASP-like protein 4A3 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","--"]
["c105038.graph_c0",17,1.6,20,2.08,19,2.22,51,4.09,46,4.23,78,7.65,0.000617082,1.262962388,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c93224.graph_c0",1026,66.11,956,58.16,965,63.95,543,35.79,467,35.26,516,33.82,4.24e-46,-1.27093567,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29396 PE=4 SV=1","--","--","uncharacterized protein LOC111399696 [Olea europaea var. sylvestris]","--","--"]
["c113363.graph_c0",43,3.22,43,2.54,69,4.48,166,7.32,153,9.42,215,10.44,2.04e-09,1.425755929,"up","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K03444|1.5e-190|oeu:111366079|K03444 MFS transporter, SP family, ERD6-like sugar transporter | (RefSeq) sugar transporter ERD6-like 16 isoform X1","[R]","General function prediction only ","Sugar (and other) transporter;; Major Facilitator Superfamily;; Sugar (and other) transporter","Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana OX=3702 GN=At5g18840 PE=2 SV=2","Putative transporter (Major facilitator superfamily) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23733 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","sugar transporter ERD6-like 16 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c116224.graph_c1",41,2.77,34,2.48,23,1.8,19,1.44,11,0.95,24,2.05,0.008984652,-1.13312825,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103732.graph_c0",14,1.19,3,0.17,6,0.37,245,19.76,378,30.44,385,26.48,4.61e-21,4.736719447,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|4.0e-104|tcc:18587477|K20628 expansin | (RefSeq) expansin-A10","--","--","Expansin C-terminal domain;; Lytic transglycolase","Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2","Expansin OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a012073mg PE=3 SV=1","S","Function unknown","expansin-A6-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c94099.graph_c0",17,1.86,13,1.34,9,1.01,45,5.05,37,4.76,41,4.57,0.003072022,1.272419248,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K13425|1.9e-24|han:110922953|K13425 WRKY transcription factor 22 | (RefSeq) WRKY transcription factor 22-like","--","--","WRKY DNA -binding domain;; Plant zinc cluster domain","Probable WRKY transcription factor 21 OS=Arabidopsis thaliana OX=3702 GN=WRKY21 PE=1 SV=1","WRKY domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00016162001 PE=4 SV=1","K","Transcription","probable WRKY transcription factor 21 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c96016.graph_c0",328,26.1,428,32.08,405,33.24,228,19.37,219,21.5,244,20.58,2.83e-15,-1.066655028,"down","--","--","Cellular Component: photosystem II (GO:0009523);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: manganese ion binding (GO:0030145);; ","K02723|1.1e-96|oeu:111394892|K02723 photosystem II PsbY protein | (RefSeq) photosystem II core complex proteins psbY, chloroplastic-like","--","--","Photosystem II protein Y (PsbY)","Photosystem II core complex proteins psbY, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBY PE=1 SV=2","Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G019200 PE=3 SV=1","S","Function unknown","photosystem II core complex proteins psbY, chloroplastic-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Photosynthesis (ko00195)"]
["c104937.graph_c1",106,2.92,97,2.52,88,2.36,572,16.87,471,15.99,528,15.23,2.76e-48,2.097673063,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: cellular glucose homeostasis (GO:0001678);; Molecular Function: hexokinase activity (GO:0004396);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: glucose binding (GO:0005536);; Biological Process: glycolytic process (GO:0006096);; ","K00844|6.8e-102|oeu:111392003|K00844 hexokinase [EC:2.7.1.1] | (RefSeq) hexokinase-3-like","[G]","Carbohydrate transport and metabolism ","Hexokinase;; Hexokinase;; Hexokinase","Hexokinase-3 OS=Arabidopsis thaliana OX=3702 GN=At1g50460 PE=1 SV=1","Phosphotransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14811 PE=3 SV=1","G","Carbohydrate transport and metabolism","hexokinase-3-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520);; Carbon metabolism (ko01200)"]
["c90561.graph_c0",10,1.11,9,0.94,6,0.68,35,3.98,26,3.39,34,3.84,0.002505812,1.496391144,"up","--","--","Molecular Function: DNA binding (GO:0003677);; ","K09420|5.9e-34|nau:109237279|K09420 transcriptional activator Myb | (RefSeq) myb-related protein 3R-1-like","[K]","Transcription ","--","Transcription factor MYB3R-4 OS=Arabidopsis thaliana OX=3702 GN=MYB3R4 PE=1 SV=1","Myb-related protein 3R-1-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_07027 PE=4 SV=1","K","Transcription","transcription factor MYB3R-1 isoform X2 [Sesamum indicum]","molecular function: binding (GO:0005488)","--"]
["c106114.graph_c0",0,0,1,0.05,0,0,31,1.27,32,1.46,33,1.41,9.73e-09,4.482518427,"up","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K19892|1.6e-68|dct:110102174|K19892 glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 4 isoform X1","--","--","Glycosyl hydrolases family 17","Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana OX=3702 GN=At1g32860 PE=2 SV=1","Glucan endo-1,3-beta-D-glucosidase OS=Gossypium mustelinum OX=34275 GN=E1A91_A05G157500v1 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-glucosidase 11-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Starch and sucrose metabolism (ko00500)"]
["c61644.graph_c0",1,0.07,0,0,2,0.15,42,3.09,39,3.29,38,2.86,1.33e-09,4.132751518,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1","Putative Transcription factor bHLH61 isoform 2 OS=Davidia involucrata OX=16924 GN=Din_004311 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111404850 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c96985.graph_c0",120,12.35,126,12.73,155,16.37,26,2.74,22,2.69,14,1.47,5.29e-25,-2.946711434,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111300.graph_c0",26,2.51,22,1.84,36,3.73,6,0.76,13,1.69,21,2.76,0.007531066,-1.319993385,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","K01768|9.1e-37|ghi:107911085|K01768 adenylate cyclase [EC:4.6.1.1] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107911085","[R]","General function prediction only ","--","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_020664 PE=4 SV=1","G","Carbohydrate transport and metabolism","Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]","molecular function: binding (GO:0005488)","Purine metabolism (ko00230)"]
["c115480.graph_c0",8,0.12,0,0,1,0.01,39,0.54,82,1.31,59,0.82,0.000960087,2.892935184,"up","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K08712|3.3e-130|gsl:Gasu_29800|K08712 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 | (RefSeq) ABC transporter, ATP-binding protein","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-2 type transporter;; ABC transporter;; Plant PDR ABC transporter associated;; ABC-2 type transporter;; ABC-transporter N-terminal;; AAA domain, putative AbiEii toxin, Type IV TA system;; ATPase family associated with various cellular activities (AAA)","ABC transporter G family member 35 OS=Arabidopsis thaliana OX=3702 GN=ABCG35 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_022903 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 29-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","ABC transporters (ko02010)"]
["c94473.graph_c0",38,2.48,30,1.91,19,1.28,2,0.13,1,0.08,2,0.13,3.13e-09,-3.820489825,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20597 PE=4 SV=1","--","--","NDR1/HIN1-like protein 26 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97821.graph_c1",12,1.59,14,1.81,11,1.59,50,7.05,29,5.17,60,8.46,0.000493961,1.495140604,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K00279|2.6e-20|oeu:111388513|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 5-like","--","--","--","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2969 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Zeatin biosynthesis (ko00908)"]
["c114640.graph_c1",266,3.91,250,3.22,210,2.9,592,9.25,593,10.11,714,10.53,1.44e-19,1.060335578,"up","[L]","Replication, recombination and repair ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: ribonuclease III activity (GO:0004525);; Molecular Function: ATP binding (GO:0005524);; Biological Process: RNA processing (GO:0006396);; Biological Process: gene silencing by RNA (GO:0031047);; ","K11592|0.0e+00|oeu:111384661|K11592 endoribonuclease Dicer [EC:3.1.26.-] | (RefSeq) endoribonuclease Dicer homolog 2-like","[A]","RNA processing and modification ","Ribonuclease III domain;; Ribonuclease-III-like;; Helicase conserved C-terminal domain;; Dicer dimerisation domain;; PAZ domain;; DEAD/DEAH box helicase;; Type III restriction enzyme, res subunit","Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE=1 SV=2","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_008681 PE=3 SV=1","A","RNA processing and modification","endoribonuclease Dicer homolog 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c114451.graph_c0",69,2.3,67,2.83,59,2.25,29,1.72,30,1.17,35,1.25,7.55e-06,-1.342398288,"down","[M]","Cell wall/membrane/envelope biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Lipid II flippase MurJ;; Polysaccharide biosynthesis C-terminal domain","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004895 PE=4 SV=1","S","Function unknown","hypothetical protein F0562_004895 [Nyssa sinensis]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94900.graph_c0",65,13.14,57,10.72,48,10.45,22,5.15,37,11.34,33,7.98,0.000442899,-1.165690961,"down","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","Domain of unknown function (DUF4371)","--","TTF-type domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G145300v2 PE=4 SV=1","S","Function unknown","zinc finger MYM-type protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c109354.graph_c0",71,9.11,53,6.27,58,7.82,13,1.59,18,2.53,17,2,1.01e-09,-2.166494479,"down","--","--","Biological Process: defense response (GO:0006952);; Molecular Function: ADP binding (GO:0043531);; ","K13457|6.0e-21|adu:107487145|K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like","[T]","Signal transduction mechanisms ","--","Putative late blight resistance protein homolog R1B-19 OS=Solanum demissum OX=50514 GN=R1B-19 PE=5 SV=2","NBS-LRR class resistance protein Fy8-Ry8 (Fragment) OS=Sesamum indicum OX=4182 PE=4 SV=1","S","Function unknown","putative late blight resistance protein homolog R1B-16 isoform X2 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c105205.graph_c0",2,0.06,8,0.25,11,0.38,20,0.66,31,1.23,34,1.14,0.006016148,1.543992457,"up","--","--","--","K14494|1.0e-41|adu:107481054|K14494 DELLA protein | (RefSeq) DELLA protein GAI","--","--","GRAS domain family;; GRAS domain family;; GRAS domain family;; GRAS domain family","Scarecrow-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=SCL14 PE=1 SV=2","GRAS domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01945 PE=3 SV=1","K","Transcription","scarecrow-like protein 14 [Sesamum indicum]","--","Plant hormone signal transduction (ko04075)"]
["c110300.graph_c1",542,17.59,569,17.65,478,17.18,256,9.35,230,9.93,246,9.93,7.9e-37,-1.433594407,"down","[GEPR]","--","Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);; Biological Process: phosphate ion transport (GO:0006817);; Cellular Component: integral component of membrane (GO:0016021);; ","K08176|5.0e-297|oeu:111371596|K08176 MFS transporter, PHS family, inorganic phosphate transporter | (RefSeq) inorganic phosphate transporter 1-4-like","[P]","Inorganic ion transport and metabolism ","Sugar (and other) transporter;; Major Facilitator Superfamily","Low affinity inorganic phosphate transporter 1 OS=Petunia hybrida OX=4102 GN=PT1 PE=2 SV=1","Phosphate transporter OS=Catharanthus roseus OX=4058 GN=PIT1 PE=2 SV=1","P","Inorganic ion transport and metabolism","inorganic phosphate transporter 1-4-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116198.graph_c0",3,1.26,1,0.38,0,0,43,2.08,41,2.28,47,2.64,4.17e-10,4.029534796,"up","--","--","--","K15111|7.7e-07|oeu:111402055|K15111 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26 | (RefSeq) protein MITOFERRINLIKE 1, chloroplastic-like","--","--","--","--","--","--","--","--","--","--"]
["c104802.graph_c0",1832,77.51,2039,81.86,1807,79.04,1004,43.62,748,37.21,908,39.29,1e-71,-1.416127383,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K12900|7.8e-30|lang:109341833|K12900 FUS-interacting serine-arginine-rich protein 1 | (RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A","--","--","AP2 domain","Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2","AP2/ERF domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_027343 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor ERF110-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Spliceosome (ko03040)"]
["c104918.graph_c0",28,0.9,13,0.4,30,0.99,114,3.74,180,6.77,137,4.51,1.07e-12,2.222768476,"up","[DPM]","--","Molecular Function: copper ion binding (GO:0005507);; Biological Process: lignin catabolic process (GO:0046274);; Cellular Component: apoplast (GO:0048046);; Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);; ","K05909|1.1e-298|sind:105178005|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-11","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","Laccase-11 OS=Arabidopsis thaliana OX=3702 GN=LAC11 PE=2 SV=1","Laccase OS=Solanum tuberosum OX=4113 GN=102578526 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","laccase-11 [Sesamum indicum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: extracellular region (GO:0005576);; molecular function: catalytic activity (GO:0003824)","--"]
["c103636.graph_c2",48,3.23,31,1.74,48,3.37,247,13.43,235,15.43,251,16.63,1.9e-24,2.175433159,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: diacylglycerol O-acyltransferase activity (GO:0004144);; Biological Process: glycerolipid biosynthetic process (GO:0045017);; ","K15406|6.7e-58|bna:106451554|K15406 wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20] | (RefSeq) O-acyltransferase WSD1","--","--","WS/DGAT C-terminal domain;; Wax ester synthase-like Acyl-CoA acyltransferase domain;; Retrotransposon gag protein;; gag-polypeptide of LTR copia-type","O-acyltransferase WSD1 OS=Arabidopsis thaliana OX=3702 GN=WSD1 PE=2 SV=1","Diacylglycerol O-acyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18674 PE=4 SV=1","S","Function unknown","O-acyltransferase WSD1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Cutin, suberine and wax biosynthesis (ko00073)"]
["c82864.graph_c0",19,1.45,11,0.79,18,1.42,388,30.44,494,44.43,523,40.74,6.79e-71,4.467221109,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K09422|4.2e-128|oeu:111390480|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB8-like","[K]","Transcription ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1","Transcription factor OS=Salvia miltiorrhiza OX=226208 GN=MYB111 PE=2 SV=1","K","Transcription","transcription factor MYB8-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c107208.graph_c0",4,0.62,2,0.29,5,0.7,44,4.18,16,1.76,42,4.9,1.41e-05,2.564070137,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K03515|6.8e-89|ghi:107894697|K03515 DNA repair protein REV1 [EC:2.7.7.-] | (RefSeq) uncharacterized protein LOC107894697","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_042891 PE=4 SV=1","--","--","hypothetical protein VITISV_042891 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c109422.graph_c1",6,0.4,6,0.38,3,0.21,27,1.85,36,2.83,27,1.84,0.000167764,2.080658065,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113506.graph_c0",69,2.1,67,2.23,53,1.89,178,4.92,159,5.84,180,5.08,6.1e-08,1.117788406,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K17710|8.4e-71|nta:107815568|K17710 pentatricopeptide repeat domain-containing protein 1 | (RefSeq) pentatricopeptide repeat-containing protein At5g25630-like","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; PPR repeat;; Pentacotripeptide-repeat region of PRORP;; Mitochondrial ATPase expression","Pentatricopeptide repeat-containing protein At5g25630 OS=Arabidopsis thaliana OX=3702 GN=At5g25630 PE=2 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007151 PE=4 SV=1","S","Function unknown","hypothetical protein F0562_007151 [Nyssa sinensis]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c82968.graph_c0",0,0,0,0,0,0,127,18.76,207,35.09,206,30.21,1.82e-22,7.101933801,"up","--","--","--","--","--","--","--","--","Putative wall structural protein 1-like protein OS=Olea europaea subsp. europaea OX=158383 PE=2 SV=1","--","--","glycine-rich protein 5-like [Olea europaea var. sylvestris]","--","--"]
["c41736.graph_c0",7,5.52,6,4.12,5,3.72,43,33.11,44,39.46,56,42.6,1.21e-07,2.495351717,"up","--","--","Cellular Component: proteasome complex (GO:0000502);; ","K03029|6.2e-26|sind:105178155|K03029 26S proteasome regulatory subunit N10 | (RefSeq) 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","von Willebrand factor type A domain","26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RPN10 PE=1 SV=1","26S proteasome non-ATPase regulatory subunit 4 (Fragment) OS=Anthurium amnicola OX=1678845 GN=MBP1_6 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","hypothetical protein EUGRSUZ_J02453 [Eucalyptus grandis]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","Proteasome (ko03050)"]
["c116217.graph_c0",1390,28.93,1587,32.31,1494,31.96,710,15.62,566,14.42,696,16.25,6.72e-76,-1.503990535,"down","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: protein polyubiquitination (GO:0000209);; Biological Process: nucleotide-excision repair, DNA damage recognition (GO:0000715);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: damaged DNA binding (GO:0003684);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: DNA repair (GO:0006281);; Biological Process: nucleotide-excision repair (GO:0006289);; Biological Process: nucleotide-excision repair, preincision complex stabilization (GO:0006293);; Biological Process: nucleotide-excision repair, preincision complex assembly (GO:0006294);; Biological Process: nucleotide-excision repair, DNA incision, 5'-to lesion (GO:0006296);; Biological Process: chromatin organization (GO:0006325);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: protein monoubiquitination (GO:0006513);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to UV (GO:0009411);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cellular process (GO:0009987);; Biological Process: histone monoubiquitination (GO:0010390);; Biological Process: cellular component organization (GO:0016043);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: covalent chromatin modification (GO:0016569);; Biological Process: histone modification (GO:0016570);; Biological Process: histone ubiquitination (GO:0016574);; Biological Process: protein deubiquitination (GO:0016579);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: cellular component assembly (GO:0022607);; Cellular Component: cell junction (GO:0030054);; Biological Process: positive regulation of protein-containing complex assembly (GO:0031334);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Cellular Component: Cul4B-RING E3 ubiquitin ligase complex (GO:0031465);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: histone H2A ubiquitination (GO:0033522);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: nucleotide-excision repair, DNA incision (GO:0033683);; Biological Process: cellular protein-containing complex assembly (GO:0034622);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular response to UV (GO:0034644);; Biological Process: histone H2A monoubiquitination (GO:0035518);; Biological Process: protein modification process (GO:0036211);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: regulation of protein-containing complex assembly (GO:0043254);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: post-translational protein modification (GO:0043687);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: regulation of cellular component biogenesis (GO:0044087);; Biological Process: positive regulation of cellular component biogenesis (GO:0044089);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: protein-containing complex binding (GO:0044877);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: positive regulation of cellular component organization (GO:0051130);; Biological Process: chromosome organization (GO:0051276);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: protein autoubiquitination (GO:0051865);; Biological Process: protein-containing complex assembly (GO:0065003);; Biological Process: protein-DNA complex assembly (GO:0065004);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: protein modification by small protein removal (GO:0070646);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: global genome nucleotide-excision repair (GO:0070911);; Biological Process: UV-damage excision repair (GO:0070914);; Biological Process: cellular response to abiotic stimulus (GO:0071214);; Biological Process: cellular response to radiation (GO:0071478);; Biological Process: cellular response to light stimulus (GO:0071482);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: protein-DNA complex subunit organization (GO:0071824);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: cellular response to environmental stimulus (GO:0104004);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Cellular Component: catalytic complex (GO:1902494);; Cellular Component: transferase complex (GO:1990234);; ","--","--","--","WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain","--","WD_REPEATS_REGION domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_047664 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111409605 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; cellular component: cell junction (GO:0030054)","--"]
["c113715.graph_c0",2389,55.84,2299,51.2,2084,49.84,1323,32.07,1090,29.89,1370,32.75,2.43e-66,-1.164029564,"down","--","--","Biological Process: protein glycosylation (GO:0006486);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: seed germination (GO:0009845);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: lipid glycosylation (GO:0030259);; ","K02370|7.8e-15|ccp:CHC_T00009229001|K02370 alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:2.4.1.223 2.4.1.224] | (RefSeq) Glycosyltransferase, family GT8 and family GT64","[GMW]","--","Glycosyl transferase family 64 domain","Glucosamine inositolphosphorylceramide transferase 1 OS=Arabidopsis thaliana OX=3702 GN=GINT1 PE=2 SV=1","Glyco_transf_64 domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00029531001 PE=3 SV=1","--","--","glycosyltransferase family protein 64 protein C5-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c118425.graph_c0",101,10.24,144,13.75,137,14.25,58,6.02,63,7.49,72,7.42,1.69e-08,-1.29043228,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99141.graph_c0",46,2.15,41,1.5,31,1.38,193,8.54,173,9.23,212,9.16,2.7e-18,1.942371904,"up","--","--","Biological Process: mitochondrial RNA metabolic process (GO:0000959);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: mRNA metabolic process (GO:0016071);; Biological Process: cytidine to uridine editing (GO:0016554);; Biological Process: mRNA modification (GO:0016556);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: mitochondrial mRNA modification (GO:0080156);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: mitochondrial RNA modification (GO:1900864);; Biological Process: chloroplast RNA modification (GO:1900865);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; ","K00655|1.6e-22|sind:105166581|K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] | (RefSeq) uncharacterized protein LOC105166581","--","--","--","Multiple organellar RNA editing factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF1 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_007346 PE=4 SV=1","S","Function unknown","multiple organellar RNA editing factor 4, mitochondrial-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564)"]
["c111699.graph_c0",258,10.49,224,8.19,220,8.9,89,3.29,95,4.25,103,4.6,8.36e-21,-1.600264741,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99579.graph_c0",249,26.45,312,31.11,283,30.88,64,6.93,62,7.7,69,7.21,7.93e-43,-2.415453997,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112421.graph_c0",2257,75.27,2353,73.03,2066,70.43,656,23.02,627,24.76,629,21.59,3.01e-191,-2.120394299,"down","--","--","Molecular Function: protein farnesyltransferase activity (GO:0004660);; Cellular Component: protein farnesyltransferase complex (GO:0005965);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: protein prenylation (GO:0018342);; Biological Process: protein farnesylation (GO:0018343);; ","K05954|4.7e-65|oeu:111396929|K05954 protein farnesyltransferase subunit beta [EC:2.5.1.58] | (RefSeq) protein farnesyltransferase subunit beta isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Prenyltransferase and squalene oxidase repeat;; Prenyltransferase and squalene oxidase repeat","Protein farnesyltransferase subunit beta OS=Pisum sativum OX=3888 GN=FTB PE=1 SV=1","Protein farnesyltransferase subunit beta OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a006858mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein farnesyltransferase subunit beta isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Terpenoid backbone biosynthesis (ko00900)"]
["c96182.graph_c0",14,1.85,31,3.86,26,3.53,94,12.75,81,12.62,110,14.87,1.93e-07,1.633411075,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101216.graph_c0",6674,382.78,7223,392.82,6298,361.49,3581,196.88,2973,182.46,3262,174.13,1.92e-121,-1.360894292,"down","--","--","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: response to acid chemical (GO:0001101);; Biological Process: response to molecule of fungal origin (GO:0002238);; Biological Process: response to stress (GO:0006950);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: aging (GO:0007568);; Biological Process: biological_process (GO:0008150);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to nematode (GO:0009624);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: leaf senescence (GO:0010150);; Biological Process: response to ozone (GO:0010193);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to drug (GO:0042493);; Biological Process: response to external biotic stimulus (GO:0043207);; Biological Process: response to antibiotic (GO:0046677);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: plant organ senescence (GO:0090693);; Biological Process: plant organ development (GO:0099402);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K18588|4.7e-31|oeu:111397274|K18588 coenzyme Q-binding protein COQ10 | (RefSeq) uncharacterized protein LOC111397274 isoform X1","--","--","Wound-induced protein WI12","Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1","Wound-induced protein 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_04902 PE=4 SV=1","S","Function unknown","wound-induced protein 1-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)","--"]
["c75961.graph_c0",87,12.76,45,6.2,69,10.36,50,7.51,26,4.48,42,6.26,0.001206203,-1.075073176,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102767.graph_c0",10,1.73,17,2.81,7,1.34,130,13.13,126,14.79,146,15.96,1.11e-21,3.145378348,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: regulation of translation (GO:0006417);; Biological Process: regulation of translational initiation (GO:0006446);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: posttranscriptional regulation of gene expression (GO:0010608);; Biological Process: positive regulation of gene expression (GO:0010628);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: positive regulation of cellular protein metabolic process (GO:0032270);; Biological Process: regulation of cellular amide metabolic process (GO:0034248);; Biological Process: positive regulation of cellular amide metabolic process (GO:0034250);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: positive regulation of translation (GO:0045727);; Biological Process: positive regulation of translational initiation (GO:0045948);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: positive regulation of protein metabolic process (GO:0051247);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of mitochondrial translation (GO:0070129);; Biological Process: positive regulation of mitochondrial translation (GO:0070131);; Biological Process: regulation of mitochondrial translational initiation (GO:0070132);; Biological Process: positive regulation of mitochondrial translational initiation (GO:0070134);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","--","--","--","--","--","Pentatricopeptide repeat-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06656 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007)","--"]
["c116006.graph_c0",640594,17414.05,686811,17678.8,646136,18110.12,173727,4950.78,122721,4004.11,144547,4104.13,2.26e-84,-2.476607187,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K13229|9.7e-74|sbi:8070754|K13229 2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.11.59] | (RefSeq) DIBOA-glucoside dioxygenase BX6","[QR]","--","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g06620 PE=2 SV=1","Fe2OG dioxygenase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_002581 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","1-aminocyclopropane-1-carboxylate oxidase [Actinidia chinensis var. chinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Benzoxazinoid biosynthesis (ko00402)"]
["c106037.graph_c0",51,2.83,47,2.42,50,2.94,217,13.47,165,11.53,179,10.05,4.68e-13,1.577569333,"up","--","--","Cellular Component: cytoplasmic chromosome (GO:0000229);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: protein disulfide isomerase activity (GO:0003756);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: chromosome (GO:0005694);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to temperature stimulus (GO:0009266);; Cellular Component: nucleoid (GO:0009295);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to heat (GO:0009408);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid chromosome (GO:0009508);; Cellular Component: plastid envelope (GO:0009526);; Cellular Component: plastid stroma (GO:0009532);; Cellular Component: chloroplast thylakoid (GO:0009534);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: thylakoid (GO:0009579);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: plastid organization (GO:0009657);; Biological Process: chloroplast organization (GO:0009658);; Biological Process: regulation of biosynthetic process (GO:0009889);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: isomerase activity (GO:0016853);; Molecular Function: intramolecular oxidoreductase activity (GO:0016860);; Molecular Function: intramolecular oxidoreductase activity, transposing S-S bonds (GO:0016864);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: envelope (GO:0031975);; Cellular Component: plastid thylakoid (GO:0031976);; Cellular Component: organelle subcompartment (GO:0031984);; Biological Process: RNA biosynthetic process (GO:0032774);; Cellular Component: photosynthetic membrane (GO:0034357);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Cellular Component: chloroplast nucleoid (GO:0042644);; Cellular Component: plastid nucleoid (GO:0042646);; Cellular Component: thylakoid membrane (GO:0042651);; Biological Process: plastid transcription (GO:0042793);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete thylakoid part (GO:0044436);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Cellular Component: plastid thylakoid membrane (GO:0055035);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid-templated transcription (GO:0097659);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K22519|7.0e-98|oeu:111374398|K22519 protein disulfide-isomerase [EC:5.3.4.1] | (RefSeq) protein disulfide isomerase pTAC5, chloroplastic-like isoform X1","--","--","Putative peptidoglycan binding domain;; Putative peptidoglycan binding domain","Protein disulfide isomerase pTAC5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC5 PE=1 SV=1","PG_binding_1 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031840 PE=4 SV=1","S","Function unknown","protein disulfide isomerase pTAC5, chloroplastic-like isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: nucleoid (GO:0009295);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020)","--"]
["c100964.graph_c0",110,4.55,89,3.15,84,3.42,373,16.59,457,23.95,527,24.43,5.3e-31,1.924363334,"up","[E]","Amino acid transport and metabolism ","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; ","K16298|7.6e-156|oeu:111382425|K16298 serine carboxypeptidase-like clade IV [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like","[OE]","--","Serine carboxypeptidase","Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana OX=3702 GN=SCPL48 PE=2 SV=2","Carboxypeptidase OS=Salvia splendens OX=180675 GN=CPVL PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","serine carboxypeptidase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c109352.graph_c0",91,2.79,124,3.36,118,3.35,4,0.09,0,0,8,0.19,4.79e-28,-4.822389286,"down","--","--","Molecular Function: transferase activity (GO:0016740);; ","K12349|6.9e-46|ccaj:109806181|K12349 neutral ceramidase [EC:3.5.1.23] | (RefSeq) neutral ceramidase-like","[R]","General function prediction only ","RNase H-like domain found in reverse transcriptase","Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1","Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00018586pilonHSYRG00024 PE=3 SV=1","H","Coenzyme transport and metabolism","uncharacterized protein LOC113756011 [Coffea eugenioides]","molecular function: catalytic activity (GO:0003824)","Sphingolipid metabolism (ko00600)"]
["c95062.graph_c2",1439,304.06,1795,359.32,1461,318.05,807,175.63,784,196.78,874,188.14,1.12e-53,-1.24740865,"down","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[S]","Function unknown ","Ribosome associated membrane protein RAMP4","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038257001 PE=3 SV=1","T","Signal transduction mechanisms","stress-associated endoplasmic reticulum protein 2-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c86505.graph_c0",436,20.7,474,21.27,477,23.31,2132,103.5,1719,95.6,2051,99.07,1.1e-97,1.759567275,"up","[V]","Defense mechanisms ","Molecular Function: antiporter activity (GO:0015297);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K03327|2.3e-234|oeu:111396792|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 49-like isoform X1","[R]","General function prediction only ","MatE","Protein DETOXIFICATION 49 OS=Arabidopsis thaliana OX=3702 GN=DTX49 PE=2 SV=1","Protein DETOXIFICATION OS=Rehmannia glutinosa OX=99300 PE=2 SV=1","V","Defense mechanisms","protein DETOXIFICATION 49-like isoform X1 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c86952.graph_c0",4,0.24,3,0.17,16,0.98,67,4.09,93,6.5,79,4.8,6.04e-11,2.878527877,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K24028|9.3e-69|smo:SELMODRAFT_453232|K24028 salicylic acid 3-hydroxylase [EC:1.14.11.-] | (RefSeq) 2-oxoacid-dependent dioxygenase","[QR]","--","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Probable 2-oxoglutarate-dependent dioxygenase At3g111800 OS=Arabidopsis thaliana OX=3702 GN=At3g11180 PE=2 SV=1","Fe2OG dioxygenase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_024338 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","probable 2-oxoglutarate-dependent dioxygenase At3g111800 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c91804.graph_c0",3,0.28,2,0.17,0,0,22,2.49,30,3.93,31,3.48,2.51e-06,3.178190418,"up","--","--","--","--","--","--","C2 domain","--","C2 domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05098 PE=4 SV=1","S","Function unknown","protein SRC2-like [Olea europaea var. sylvestris]","--","--"]
["c112738.graph_c0",9,0.34,14,0.82,13,1.29,59,3.43,54,2.64,57,2.95,2.98e-06,1.836767714,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20718|1.1e-57|han:110878914|K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERECTA","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana OX=3702 GN=At1g12460 PE=1 SV=1","Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_015996 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At1g12460, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016)"]
["c101840.graph_c0",123,8.82,135,11.24,94,7.66,320,24.29,289,25.11,370,26.55,4.92e-13,1.145353611,"up","--","--","Molecular Function: ubiquitin protein ligase activity (GO:0061630);; ","K11982|1.7e-148|oeu:111399596|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase RHC1A","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; zinc-ribbon;; Zinc finger, C3HC4 type (RING finger);; RING-H2 zinc finger domain;; RING-like zinc finger;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger;; Zinc finger, C3HC4 type (RING finger)","Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1","RING-type E3 ubiquitin transferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07663 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable E3 ubiquitin-protein ligase RHC1A [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c89778.graph_c0",4,0.27,9,0.57,9,0.63,37,2.5,47,3.71,49,3.37,5.64e-06,2.133876336,"up","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05658|1.2e-113|oeu:111367970|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] | (RefSeq) ABC transporter B family member 19","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter","ABC transporter B family member 19 OS=Arabidopsis thaliana OX=3702 GN=ABCB19 PE=1 SV=1","Multidrug/pheromone exporter, ABC superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02773 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter B family member 19 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c90725.graph_c0",17,1.32,29,2.13,22,1.76,1,0.08,2,0.18,2,0.16,2.03e-07,-3.474498242,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; ","--","--","--","Transcriptional repressor, ovate","Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1","Transcription repressor OS=Theobroma cacao OX=3641 GN=TCM_044283 PE=4 SV=1","S","Function unknown","transcription repressor OFP13-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c117469.graph_c0",178,5.26,182,6.01,167,5.71,55,0.97,56,0.91,73,1.17,3.89e-20,-1.823437371,"down","--","--","Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: mitotic cytokinesis (GO:0000281);; Biological Process: cytokinesis (GO:0000910);; Biological Process: cytokinesis by cell plate formation (GO:0000911);; Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: SNAP receptor activity (GO:0005484);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: transport (GO:0006810);; Biological Process: cell cycle (GO:0007049);; Biological Process: biological_process (GO:0008150);; Cellular Component: cell plate (GO:0009504);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to mechanical stimulus (GO:0009612);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: vesicle-mediated transport (GO:0016192);; Biological Process: cell cycle process (GO:0022402);; Cellular Component: intrinsic component of membrane (GO:0031224);; Biological Process: cytokinetic process (GO:0032506);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: cell division (GO:0051301);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: membrane organization (GO:0061024);; Biological Process: membrane fusion (GO:0061025);; Biological Process: cytoskeleton-dependent cytokinesis (GO:0061640);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to alcohol (GO:0097305);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: mitotic cytokinetic process (GO:1902410);; Biological Process: mitotic cell cycle process (GO:1903047);; ","K18211|5.2e-57|oeu:111377579|K18211 synaptosomal-associated protein 25 | (RefSeq) putative SNAP25 homologous protein SNAP30","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana OX=3702 GN=SNAP30 PE=3 SV=1","Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_13671 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","putative SNAP25 homologous protein SNAP30 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; cellular component: organelle (GO:0043226);; cellular component: membrane part (GO:0044425);; biological process: multi-organism process (GO:0051704)","--"]
["c102459.graph_c0",40,1.29,38,1.21,22,0.69,245,7.98,319,11.71,311,10.16,2.12e-34,2.775629916,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|7.9e-216|lang:109344822|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 3.1-like","[E]","Amino acid transport and metabolism ","POT family;; POT family","Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1","H+/oligopeptide symporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07672 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 3.1-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c108145.graph_c0",702,33.58,764,36.04,640,32.4,122,6.41,75,4.61,95,4.93,7.16e-121,-3.157608772,"down","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","K16221|1.9e-24|ghi:107942277|K16221 transcription factor TCP21 (protein CCA1 HIKING EXPEDITION) | (RefSeq) transcription factor TCP7-like","--","--","TCP family transcription factor","Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1","TCP family transcription factor OS=Striga asiatica OX=4170 GN=STAS_13071 PE=4 SV=1","K","Transcription","transcription factor TCP9-like isoform X2 [Coffea arabica]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","Circadian rhythm - plant (ko04712)"]
["c86943.graph_c0",350,45.04,343,41.96,315,42.13,85,12.4,72,11.13,66,9.48,5.41e-52,-2.478116649,"down","[T]","Signal transduction mechanisms ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: RNA processing (GO:0006396);; Biological Process: mRNA processing (GO:0006397);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: mRNA metabolic process (GO:0016071);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: protein modification process (GO:0036211);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K08287|3.5e-91|ppp:112274950|K08287 dual-specificity kinase [EC:2.7.12.1] | (RefSeq) serine/threonine-protein kinase AFC3-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1","Protein kinase OS=Striga asiatica OX=4170 GN=STAS_17045 PE=4 SV=1","T","Signal transduction mechanisms","CMGC/CLK protein kinase [Trametes coccinea BRFM310]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c99058.graph_c0",128,8.12,139,8.29,147,9.41,376,24.24,413,30.51,438,28.02,1.98e-17,1.23782751,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: actin cytoskeleton (GO:0015629);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: actin filament binding (GO:0051015);; Biological Process: actin filament bundle assembly (GO:0051017);; ","K09377|7.3e-81|oeu:111383633|K09377 cysteine and glycine-rich protein | (RefSeq) LIM domain-containing protein WLIM2b-like isoform X1","[TZ]","--","LIM domain","LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1","LIM domain protein WLIM2 OS=Nicotiana tabacum OX=4097 GN=SF3 PE=2 SV=1","--","--","LIM domain-containing protein WLIM2b-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c113534.graph_c0",0,0,0,0,0,0,33,0.97,34,1.14,56,1.64,1.96e-10,5.227700141,"up","[N]","Cell motility ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: cell wall organization (GO:0071555);; ","K00770|0.0e+00|oeu:111394168|K00770 1,4-beta-D-xylan synthase [EC:2.4.2.24] | (RefSeq) cellulose synthase-like protein D5","--","--","Cellulose synthase;; Glycosyl transferase family group 2","Cellulose synthase-like protein D5 OS=Arabidopsis thaliana OX=3702 GN=CSLD5 PE=2 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_11065 PE=4 SV=1","G","Carbohydrate transport and metabolism","cellulose synthase-like protein D5 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c102660.graph_c0",4,0.11,1,0.03,0,0,23,0.76,20,0.7,21,0.72,8.32e-05,2.802940502,"up","--","--","Biological Process: response to red or far red light (GO:0009639);; Biological Process: negative gravitropism (GO:0009959);; ","--","--","--","Plant protein of unknown function (DUF641)","--","DUF641 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05861 PE=4 SV=1","S","Function unknown","protein GRAVITROPIC IN THE LIGHT 1-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c109487.graph_c0",155,5.21,165,5.72,129,4.28,791,25.48,642,23.57,807,26.16,1.31e-60,1.986345387,"up","[F]","Nucleotide transport and metabolism ","Cellular Component: cytoplasm (GO:0005737);; Molecular Function: deoxynucleoside kinase activity (GO:0019136);; ","--","[F]","Nucleotide transport and metabolism ","Deoxynucleoside kinase","--","dNK domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003673mg PE=4 SV=1","F","Nucleotide transport and metabolism","uncharacterized protein LOC111373893 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c90125.graph_c1",2,0.32,0,0,2,0.33,28,4.57,36,6.73,34,5.5,8.2e-08,3.617388245,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: ATP binding (GO:0005524);; ","K09490|1.0e-102|jcu:105636089|K09490 endoplasmic reticulum chaperone BiP [EC:3.6.4.10] | (RefSeq) luminal-binding protein 5","[O]","Posttranslational modification, protein turnover, chaperones ","Hsp70 protein;; MreB/Mbl protein;; NAD-specific glutamate dehydrogenase","Luminal-binding protein 5 OS=Nicotiana tabacum OX=4097 GN=BIP5 PE=2 SV=1","Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10646 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","luminal-binding protein 5 [Jatropha curcas]","molecular function: binding (GO:0005488)","Protein export (ko03060);; Protein processing in endoplasmic reticulum (ko04141)"]
["c94134.graph_c0",11,0.67,10,0.55,10,0.58,49,3.1,61,4.99,45,3.16,5.68e-06,1.912244341,"up","--","--","Biological Process: photosynthesis (GO:0015979);; Cellular Component: chloroplast photosystem I (GO:0030093);; ","K02701|1.0e-36|oeu:111401120|K02701 photosystem I subunit PsaN | (RefSeq) photosystem I reaction center subunit N, chloroplastic-like","--","--","Photosystem I reaction centre subunit N (PSAN or PSI-N)","Photosystem I reaction center subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAN PE=1 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015106mg PE=3 SV=1","S","Function unknown","photosystem I reaction center subunit N, chloroplastic-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","Photosynthesis (ko00195)"]
["c112696.graph_c1",9,0.21,5,0.11,3,0.08,47,1.09,55,1.46,67,1.56,2.36e-09,2.800866913,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","K10268|1.2e-175|oeu:111408616|K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 3-like","[R]","General function prediction only ","Leucine Rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana OX=3702 GN=FBL3 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05741 PE=4 SV=1","S","Function unknown","F-box/LRR-repeat protein 3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c86740.graph_c0",62,6.09,74,6.85,87,8.78,21,2.11,27,3.11,30,3,8.15e-09,-1.793782233,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108586.graph_c0",8,0.15,3,0.05,5,0.09,78,1.46,86,1.84,93,1.73,8.17e-16,3.479464053,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10406|0.0e+00|oeu:111408281|K10406 kinesin family member C2/C3 | (RefSeq) kinesin-like protein KIN-14R","[Z]","Cytoskeleton ","Kinesin motor domain;; Microtubule binding;; Malectin domain","Kinesin-like protein KIN-14R OS=Arabidopsis thaliana OX=3702 GN=KIN14R PE=3 SV=1","Kinesin (KAR3 subfamily) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06560 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-14R [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c92739.graph_c0",8,0.91,13,1.39,3,0.35,35,4.09,55,7.36,62,7.19,2.63e-06,2.207610872,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; ","--","--","--","Domain of unknown function (DUF4228)","Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1","uncharacterized protein At1g66480-like OS=Nicotiana tabacum OX=4097 GN=LOC107770864 PE=4 SV=1","S","Function unknown","uncharacterized protein At1g66480-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","--"]
["c93551.graph_c0",14087,866.59,14795,859.58,13685,866.02,3495,219.92,2966,213.76,3306,206.94,0,-2.445011515,"down","[H]","Coenzyme transport and metabolism ","Molecular Function: O-methyltransferase activity (GO:0008171);; Biological Process: methylation (GO:0032259);; Molecular Function: protein dimerization activity (GO:0046983);; ","K13066|3.9e-130|oeu:111367736|K13066 caffeic acid 3-O-methyltransferase [EC:2.1.1.68] | (RefSeq) caffeic acid 3-O-methyltransferase 2","[R]","General function prediction only ","O-methyltransferase domain;; AdoMet dependent proline di-methyltransferase","Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum OX=39350 GN=COMT2 PE=2 SV=1","Caffeic acid O-methyltransferase OS=Ocimum basilicum OX=39350 PE=2 SV=1","S","Function unknown","caffeic acid 3-O-methyltransferase 2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c111181.graph_c0",121,7.57,126,6.96,122,7.19,343,16.25,345,21.64,406,22.27,4.11e-17,1.236399678,"up","--","--","Molecular Function: mRNA binding (GO:0003729);; Cellular Component: nucleus (GO:0005634);; Biological Process: mRNA processing (GO:0006397);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: RNA 3'-end processing (GO:0031123);; Biological Process: antisense RNA metabolic process (GO:0042868);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: regulation of gene silencing (GO:0060968);; ","K14408|3.4e-119|oeu:111410589|K14408 cleavage stimulation factor subunit 3 | (RefSeq) cleavage stimulation factor subunit 77","[A]","RNA processing and modification ","Suppressor of forked protein (Suf);; Tetratricopeptide repeat;; Tetratricopeptide repeat","Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana OX=3702 GN=CSTF77 PE=1 SV=1","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0065g00710 PE=4 SV=1","A","RNA processing and modification","cleavage stimulation factor subunit 77 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","mRNA surveillance pathway (ko03015)"]
["c107080.graph_c1",479,22.27,588,25.85,471,21.66,2912,167.06,2396,157.95,2738,161.3,1.78e-144,2.061834762,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014008mg PE=4 SV=1","--","--","uncharacterized protein LOC111370750 [Olea europaea var. sylvestris]","--","--"]
["c114275.graph_c0",152,5.79,179,7.13,202,8.79,89,2.59,75,2.75,84,2.37,8.33e-13,-1.41573715,"down","--","--","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: phospholipase A1 activity (GO:0008970);; ","--","--","--","Lipase (class 3)","Phospholipase A1 PLIP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PLIP1 PE=1 SV=1","Lipase_3 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13494 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111381087 isoform X2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c96067.graph_c0",61,4.37,46,3.2,65,5.27,308,22.75,335,32.22,375,28.56,1.09e-32,2.217643896,"up","--","--","--","--","--","--","--","--","WW domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041451 PE=4 SV=1","--","--","uncharacterized protein LOC111376399 [Olea europaea var. sylvestris]","--","--"]
["c106761.graph_c1",379,18.29,420,18.26,351,15.95,96,3.31,85,4.08,78,3.01,1.31e-57,-2.45297835,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K22683|2.1e-06|dct:110115251|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) protein ASPARTIC PROTEASE IN GUARD CELL 1","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease;; Eukaryotic aspartyl protease","Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g10080 PE=2 SV=1","Aspartyl protease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20057 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartic proteinase-like protein 1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c101620.graph_c0",58,1.37,45,1.01,21,0.43,79,2.35,121,4.05,129,3.43,0.000730704,1.068632135,"up","[L]","Replication, recombination and repair ","Molecular Function: helicase activity (GO:0004386);; ","K10706|9.3e-258|vvi:100262126|K10706 senataxin [EC:3.6.4.-] | (RefSeq) uncharacterized LOC100262126","[A]","RNA processing and modification ","AAA domain;; AAA domain;; AAA domain;; AAA domain;; Viral (Superfamily 1) RNA helicase","Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=UPF1 PE=1 SV=2","Putative helicase magatama 3 OS=Nicotiana attenuata OX=49451 GN=MAA3_2 PE=4 SV=1","A","RNA processing and modification","uncharacterized protein LOC111397173 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c105161.graph_c0",266,4.83,277,4.76,270,4.99,125,2.25,132,2.75,119,2.16,9.23e-20,-1.422329602,"down","--","--","--","K22374|6.6e-41|aip:107609107|K22374 3''-deamino-3''-oxonicotianamine reductase [EC:1.1.1.285] | (RefSeq) NAD(P)H-dependent 6'-deoxychalcone synthase isoform X1","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09799 PE=4 SV=1","--","--","uncharacterized protein LOC111402113 [Olea europaea var. sylvestris]","--","--"]
["c78667.graph_c1",22,8.32,8,2.8,15,5.72,75,29.12,91,40.67,99,37.98,1.34e-09,2.154353716,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02971|1.2e-37|oeu:111389560|K02971 small subunit ribosomal protein S21e | (RefSeq) 40S ribosomal protein S21-2-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S21e","40S ribosomal protein S21-2 OS=Arabidopsis thaliana OX=3702 GN=RPS21C PE=1 SV=2","Ribosomal protein S21e OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002939 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","Ribosomal protein S21e [Cynara cardunculus var. scolymus]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c100291.graph_c1",19,0.84,14,0.58,15,0.68,64,2.89,49,2.53,71,3.19,2.35e-05,1.549729349,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","uncharacterized protein LOC107788264 OS=Nicotiana tabacum OX=4097 GN=LOC107788264 PE=4 SV=1","--","--","uncharacterized protein LOC111407817 isoform X2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99557.graph_c1",304,5.69,327,5.74,295,5.97,1342,25.54,1166,25.46,1401,27.09,1.13e-86,1.749462488,"up","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to hormone (GO:0009725);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of ethylene-activated signaling pathway (GO:0010104);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: negative regulation of signaling (GO:0023057);; Biological Process: protein catabolic process (GO:0030163);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: response to chemical (GO:0042221);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of phosphorelay signal transduction system (GO:0070297);; Biological Process: negative regulation of phosphorelay signal transduction system (GO:0070298);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: regulation of intracellular signal transduction (GO:1902531);; Biological Process: negative regulation of intracellular signal transduction (GO:1902532);; Cellular Component: transferase complex (GO:1990234);; ","K14515|5.2e-243|oeu:111373045|K14515 EIN3-binding F-box protein | (RefSeq) EIN3-binding F-box protein 1-like","[R]","General function prediction only ","Leucine Rich repeat","EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1","Putative EIN3-binding F-box protein 1-like OS=Davidia involucrata OX=16924 GN=Din_033084 PE=4 SV=1","S","Function unknown","EIN3-binding F-box protein 1-like, partial [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c113474.graph_c0",17,0.54,19,0.61,11,0.54,86,2.99,56,2.01,122,3.95,7.56e-09,2.076886396,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c60389.graph_c0",1,0.36,11,2.7,1,0.36,74,23.59,48,16.89,40,12.03,0.000837096,2.659445548,"up","[C]","Energy production and conversion ","Molecular Function: aldehyde dehydrogenase [NAD(P)+] activity (GO:0004030);; ","K12355|9.4e-38|oeu:111399385|K12355 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] | (RefSeq) aldehyde dehydrogenase family 2 member C4","[C]","Energy production and conversion ","Aldehyde dehydrogenase family","Aldehyde dehydrogenase 1 OS=Artemisia annua OX=35608 GN=ALDH1 PE=1 SV=1","Aldehyde dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24674 PE=3 SV=1","C","Energy production and conversion","aldehyde dehydrogenase family 2 member C4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Phenylpropanoid biosynthesis (ko00940)"]
["c113308.graph_c0",672,22.66,688,21.57,638,22.76,2602,119,2816,147.82,3012,137.18,1.32e-117,1.75361516,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|2.9e-49|ats:109753909|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) LOC109753909; systemin receptor SR160","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat;; Arabinogalactan peptide","Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10559 PE=4 SV=1","T","Signal transduction mechanisms","probable inactive receptor kinase At4g23740 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c80215.graph_c0",0,0,2,0.9,0,0,136,68.56,156,90.67,176,87.48,2.19e-23,6.268856858,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c61333.graph_c0",3,0.97,2,0.6,3,0.98,29,9.59,29,11.02,47,15.36,4.43e-07,3.007895111,"up","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","K07375|1.4e-55|oeu:111383090|K07375 tubulin beta | (RefSeq) tubulin beta-8 chain-like","[Z]","Cytoskeleton ","Tubulin/FtsZ family, GTPase domain","Tubulin beta-9 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1","Tubulin beta chain (Fragment) OS=Davidia involucrata OX=16924 GN=Din_039592 PE=3 SV=1","Z","Cytoskeleton","tubulin beta-8 chain-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: structural molecule activity (GO:0005198);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080)","Phagosome (ko04145)"]
["c107729.graph_c0",9,0.28,8,0.24,18,0.59,68,2.19,77,2.84,89,2.86,1.09e-09,2.312607804,"up","--","--","Molecular Function: galactoside 2-alpha-L-fucosyltransferase activity (GO:0008107);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: Golgi cisterna membrane (GO:0032580);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: cell wall organization (GO:0071555);; ","K13681|0.0e+00|oeu:111388350|K13681 xyloglucan fucosyltransferase [EC:2.4.1.-] | (RefSeq) galactoside 2-alpha-L-fucosyltransferase-like","--","--","Xyloglucan fucosyltransferase","Galactoside 2-alpha-L-fucosyltransferase OS=Pisum sativum OX=3888 GN=FT1 PE=2 SV=1","Fucosyltransferase OS=Davidia involucrata OX=16924 GN=Din_037623 PE=3 SV=1","S","Function unknown","galactoside 2-alpha-L-fucosyltransferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c110351.graph_c1",623,15.26,614,14.26,524,13.23,131,3.28,145,4.16,148,3.69,1.76e-79,-2.36345365,"down","--","--","Molecular Function: phosphatase activity (GO:0016791);; Molecular Function: metal ion binding (GO:0046872);; ","K13248|3.4e-87|oeu:111369540|K13248 pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74] | (RefSeq) inorganic pyrophosphatase 1-like","[R]","General function prediction only ","Putative Phosphatase;; haloacid dehalogenase-like hydrolase","Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g17710 PE=2 SV=1","Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451920 PE=4 SV=1","S","Function unknown","inorganic pyrophosphatase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Vitamin B6 metabolism (ko00750)"]
["c89442.graph_c0",273,13.68,279,13.22,216,11.14,45,2.31,40,2.35,62,3.16,3.51e-43,-2.681167046,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K22683|8.1e-24|cit:102620377|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor C-terminal;; Xylanase inhibitor N-terminal","Probable aspartic proteinase GIP2 OS=Nicotiana benthamiana OX=4100 GN=GIP2 PE=1 SV=1","Basic 7s globulin OS=Nicotiana attenuata OX=49451 GN=BG_0 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","PREDICTED: basic 7S globulin-like [Nicotiana attenuata]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c90205.graph_c1",56,2.7,42,1.92,36,1.79,110,5.43,104,5.88,168,8.26,1.16e-05,1.158279802,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09399 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_09399 [Handroanthus impetiginosus]","--","--"]
["c86603.graph_c0",3,0.68,1,0.21,0,0,195,42.56,335,84.53,333,72.46,1.09e-33,6.605323149,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11254|1.0e-51|atr:18443072|K11254 histone H4 | (RefSeq) uncharacterized protein LOC18443072","[B]","Chromatin structure and dynamics ","Centromere kinetochore component CENP-T histone fold;; TATA box binding protein associated factor (TAF)","Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2","Histone H4 OS=Papaver somniferum OX=3469 GN=C5167_005724 PE=3 SV=1","B","Chromatin structure and dynamics","hypothetical protein C5167_005724 [Papaver somniferum]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c96445.graph_c1",13,0.66,18,0.86,16,0.83,202,10.39,198,11.69,191,9.78,7.23e-32,3.261230106,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23877|7.6e-22|dcr:108207256|K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4-like","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence OS=Arabidopsis thaliana OX=3702 GN=TBR PE=1 SV=1","PMR5N domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19633 PE=3 SV=1","S","Function unknown","protein trichome birefringence-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c95126.graph_c0",1139,62.77,1311,68.27,1198,67.94,658,37.09,625,40.36,651,36.5,8.31e-51,-1.234217633,"down","--","--","Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: sulfur compound metabolic process (GO:0006790);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: aging (GO:0007568);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to jasmonic acid (GO:0009753);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: leaf senescence (GO:0010150);; Biological Process: S-glycoside metabolic process (GO:0016143);; Biological Process: S-glycoside catabolic process (GO:0016145);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: glycosinolate metabolic process (GO:0019757);; Biological Process: glycosinolate catabolic process (GO:0019759);; Biological Process: glucosinolate metabolic process (GO:0019760);; Biological Process: glucosinolate catabolic process (GO:0019762);; Cellular Component: cell junction (GO:0030054);; Molecular Function: enzyme regulator activity (GO:0030234);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: response to chemical (GO:0042221);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: sulfur compound catabolic process (GO:0044273);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of catalytic activity (GO:0050790);; Biological Process: response to stimulus (GO:0050896);; Biological Process: nitrile metabolic process (GO:0050898);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Cellular Component: symplast (GO:0055044);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of molecular function (GO:0065009);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to herbivore (GO:0080027);; Biological Process: nitrile biosynthetic process (GO:0080028);; Biological Process: plant organ senescence (GO:0090693);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: defense response to other organism (GO:0098542);; Molecular Function: molecular function regulator (GO:0098772);; Biological Process: plant organ development (GO:0099402);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: carbohydrate derivative catabolic process (GO:1901136);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: glycosyl compound metabolic process (GO:1901657);; Biological Process: glycosyl compound catabolic process (GO:1901658);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K23330|5.4e-14|mis:MICPUN_100143|K23330 leucine-zipper-like transcriptional regulator 1 | (RefSeq) predicted protein","[R]","General function prediction only ","Galactose oxidase, central domain;; Kelch motif;; Galactose oxidase, central domain;; Kelch motif;; Kelch motif;; Kelch motif","Nitrile-specifier protein 2 OS=Arabidopsis thaliana OX=3702 GN=NSP2 PE=2 SV=1","Nitrile-specifier protein 5 OS=Nicotiana attenuata OX=49451 GN=NSP5 PE=4 SV=1","S","Function unknown","nitrile-specifier protein 5-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: symplast (GO:0055044);; biological process: multi-organism process (GO:0051704);; molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c99535.graph_c0",4,0.18,3,0.15,3,0.16,17,0.87,14,0.77,39,2.14,0.000869345,2.154092586,"up","[R]","General function prediction only ","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Biological Process: chromosome segregation (GO:0007059);; Biological Process: regulation of cytokinesis (GO:0032465);; ","K08850|3.0e-96|oeu:111410849|K08850 aurora kinase, other [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Aurora-3","[D]","Cell cycle control, cell division, chromosome partitioning ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase Aurora-3 OS=Arabidopsis thaliana OX=3702 GN=AUR3 PE=2 SV=1","Non-specific serine/threonine protein kinase OS=Striga asiatica OX=4170 GN=STAS_07254 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase Aurora-3 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c87842.graph_c0",2,0.19,6,0.54,2,0.2,76,7.4,65,7.25,70,6.77,4.75e-14,3.768154675,"up","--","--","--","--","--","--","Transcriptional activator","--","RAB6-interacting golgin OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30078 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111391317 [Olea europaea var. sylvestris]","--","--"]
["c41408.graph_c0",0,0,2,0.31,0,0,20,3.34,15,2.87,20,3.31,3.13e-05,3.343370016,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106430.graph_c0",62,3.06,66,3.07,53,3.15,20,1,16,1.62,43,3.73,2.24e-05,-1.484282587,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC113696519 [Coffea arabica]","--","--"]
["c110373.graph_c2",2,0.12,0,0,2,0.12,27,1.72,37,3.25,29,2.64,2.03e-07,3.544159924,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_015100 PE=4 SV=1","T","Signal transduction mechanisms","probable inactive receptor kinase At5g58300, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105415.graph_c3",0,0,0,0,0,0,28,6.56,20,5.37,30,6.96,5.65e-08,4.652481098,"up","--","--","--","--","--","--","--","--","--","T","Signal transduction mechanisms","putative late blight resistance protein homolog R1A-3 [Olea europaea var. sylvestris]","--","--"]
["c108912.graph_c2",17,0.81,4,0.19,3,0.13,35,1.25,49,2.15,63,2.84,2.21e-05,2.129038374,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23540|1.8e-28|nau:109211638|K23540 golgi integral membrane protein 4 | (RefSeq) uncharacterized protein LOC109211638","--","--","--","--","Putative micronuclear linker histone polyprotein OS=Corchorus olitorius OX=93759 GN=COLO4_13689 PE=4 SV=1","P","Inorganic ion transport and metabolism","uncharacterized protein LOC111375787 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c81622.graph_c0",39,2.96,32,2.31,41,3.2,20,1.51,12,1.07,13,0.99,0.000154176,-1.56822709,"down","[F]","Nucleotide transport and metabolism ","Molecular Function: nucleoside diphosphate kinase activity (GO:0004550);; Molecular Function: ATP binding (GO:0005524);; Biological Process: GTP biosynthetic process (GO:0006183);; Biological Process: UTP biosynthetic process (GO:0006228);; Biological Process: CTP biosynthetic process (GO:0006241);; ","K20790|1.4e-65|oeu:111378843|K20790 nucleoside diphosphate kinase homolog 5 | (RefSeq) probable nucleoside diphosphate kinase 5","[F]","Nucleotide transport and metabolism ","Nucleoside diphosphate kinase;; Nucleoside diphosphate kinase","Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g17410 PE=2 SV=1","Nucleoside diphosphate kinase OS=Davidia involucrata OX=16924 GN=Din_047588 PE=3 SV=1","F","Nucleotide transport and metabolism","probable nucleoside diphosphate kinase 5 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c89883.graph_c0",102,17.37,128,20.23,130,22.25,53,9.61,74,14.94,53,9.45,1.22e-07,-1.293002135,"down","--","--","--","--","--","--","Vacuolar sorting 38 and autophagy-related subunit 14","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19880 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105176739 isoform X2 [Sesamum indicum]","--","--"]
["c115607.graph_c0",6980,354.97,7172,354.74,6421,341.94,3184,151.64,1920,128.34,2133,119.82,9.95e-16,-1.805864692,"down","--","--","Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392);; Biological Process: heme oxidation (GO:0006788);; Biological Process: oxidation-reduction process (GO:0055114);; ","K21480|1.1e-61|oeu:111412957|K21480 heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] | (RefSeq) heme oxygenase 1, chloroplastic-like","[P]","Inorganic ion transport and metabolism ","Heme oxygenase","Heme oxygenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HO1 PE=1 SV=2","Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8595g9 PE=4 SV=1","S","Function unknown","hypothetical protein BVC80_8595g9 [Macleaya cordata]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Porphyrin and chlorophyll metabolism (ko00860)"]
["c108640.graph_c0",49,1.71,104,3.69,80,3.2,4,0.14,9,0.42,2,0.07,2.31e-18,-3.993799423,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K09272|2.6e-15|ota:OT_ostta14g01160|K09272 structure-specific recognition protein 1 | (RefSeq) Domain of unknown function DUF1747","[R]","General function prediction only ","HMG (high mobility group) box;; HMG-box domain","--","High mobility group protein DSP1 (Fragment) OS=Anthurium amnicola OX=1678845 GN=Dsp1_4 PE=3 SV=1","B","Chromatin structure and dynamics","high mobility group protein DSP1-like [Rhodamnia argentea]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c111840.graph_c1",1387,139.45,1551,146.89,1433,147.93,772,79.45,709,83.63,825,84.36,4.29e-64,-1.244479957,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017238mg PE=4 SV=1","--","--","uncharacterized protein LOC111396062 [Olea europaea var. sylvestris]","--","--"]
["c108364.graph_c0",70,3.78,81,3.85,75,4.32,297,14.68,275,14.39,310,15.58,1.16e-21,1.628517395,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23192 PE=4 SV=1","--","--","uncharacterized protein LOC111371630 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103312.graph_c0",150,7.67,168,8.69,139,7.51,79,3.84,74,4.47,79,4.03,6.23e-11,-1.284819455,"down","[C]","Energy production and conversion ","Cellular Component: integral component of membrane (GO:0016021);; ","K16302|3.4e-32|apro:F751_6247|K16302 metal transporter CNNM | (RefSeq) Protein MAM3","[S]","Function unknown ","SNARE associated Golgi protein","Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At4g09580 PE=1 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_038559 PE=4 SV=1","S","Function unknown","uncharacterized membrane protein At4g09580-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101474.graph_c2",38,2.92,35,6.19,41,6,15,4.77,14,4.37,22,6.97,0.000331425,-1.430279674,"down","--","--","Biological Process: intracellular protein transport (GO:0006886);; Biological Process: endoplasmic reticulum to Golgi vesicle-mediated transport (GO:0006888);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: COPII vesicle coat (GO:0030127);; ","K14007|7.9e-27|sind:105158184|K14007 protein transport protein SEC24 | (RefSeq) protein transport protein Sec24-like At4g32640","[U]","Intracellular trafficking, secretion, and vesicular transport ","Sec23/Sec24 zinc finger","Protein transport protein Sec24-like At4g32640 OS=Arabidopsis thaliana OX=3702 GN=At4g32640 PE=3 SV=3","CEF OS=Catalpa bungei OX=265496 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","CEF [Catalpa bungei]","biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","Protein processing in endoplasmic reticulum (ko04141)"]
["c103491.graph_c0",20,1.06,36,1.85,23,1.28,12,0.71,9,0.64,13,0.83,0.002822142,-1.442059801,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c71302.graph_c0",28,0.94,20,0.64,16,0.55,0,0,0,0,5,0.17,1.48e-06,-3.365728652,"down","--","--","--","--","--","--","--","--","F-box domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00019114001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111404257 [Olea europaea var. sylvestris]","--","--"]
["c75725.graph_c0",8,1.74,9,1.81,13,2.86,64,14.25,69,17.95,80,17.69,7.04e-10,2.394800729,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: large ribosomal subunit (GO:0015934);; ","K02890|1.2e-51|oeu:111378793|K02890 large subunit ribosomal protein L22 | (RefSeq) uncharacterized protein LOC111378793","--","--","--","--","Mitochondrial/chloroplast ribosomal protein L22 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19305 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111378793 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c99952.graph_c0",225,22.2,243,22.7,257,26.52,106,10.55,81,9.21,98,10.36,3.21e-22,-1.660784417,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: transporter activity (GO:0005215);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: transport (GO:0006810);; Biological Process: biological_process (GO:0008150);; Biological Process: carbohydrate transport (GO:0008643);; Molecular Function: carbohydrate transmembrane transporter activity (GO:0015144);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Cellular Component: intrinsic component of membrane (GO:0031224);; Cellular Component: intrinsic component of plasma membrane (GO:0031226);; Biological Process: carbohydrate transmembrane transport (GO:0034219);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete plasma membrane part (GO:0044459);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: sugar transmembrane transporter activity (GO:0051119);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: organic substance transport (GO:0071702);; Cellular Component: cell periphery (GO:0071944);; ","K15382|8.9e-75|nau:109219254|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter SWEET2a-like","[R]","General function prediction only ","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter SWEET2a OS=Sorghum bicolor OX=4558 GN=SWEET2A PE=3 SV=1","Sugar transporter SWEET2 OS=Jasminum sambac OX=660624 GN=SWEET2 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","sugar transporter SWEET2 [Jasminum sambac]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c101165.graph_c0",297,9.18,322,9.38,322,10.25,36,1.16,25,0.93,29,0.93,2.73e-71,-3.667224639,"down","[T]","Signal transduction mechanisms ","Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion binding (GO:0046872);; ","K22390|3.6e-279|sind:105158726|K22390 acid phosphatase type 7 | (RefSeq) purple acid phosphatase 23","[G]","Carbohydrate transport and metabolism ","Calcineurin-like phosphoesterase;; Purple acid Phosphatase, N-terminal domain;; Iron/zinc purple acid phosphatase-like protein C","Purple acid phosphatase 23 OS=Arabidopsis thaliana OX=3702 GN=PAP23 PE=1 SV=2","Purple acid phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11813 PE=3 SV=1","G","Carbohydrate transport and metabolism","Purple acid phosphatase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c108345.graph_c0",4,0.12,2,0.05,4,0.12,168,4.74,186,5.83,243,7.06,1.26e-32,5.229912721,"up","[L]","Replication, recombination and repair ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP binding (GO:0005524);; ","K11594|3.1e-286|oeu:111399340|K11594 ATP-dependent RNA helicase DDX3X [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like","[A]","RNA processing and modification ","Helicase conserved C-terminal domain;; DEAD/DEAH box helicase;; DEAD/DEAH box helicase","DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0599500 PE=3 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031101001 PE=4 SV=1","A","RNA processing and modification","DEAD-box ATP-dependent RNA helicase 52C-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c106260.graph_c0",31,0.92,34,1.11,21,0.66,196,6.15,216,7.7,291,9.03,1.98e-28,2.663366659,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: secondary active sulfate transmembrane transporter activity (GO:0008271);; Cellular Component: integral component of membrane (GO:0016021);; ","K17469|1.8e-288|sind:105158923|K17469 sulfate transporter 2, low-affinity | (RefSeq) low affinity sulfate transporter 3","[P]","Inorganic ion transport and metabolism ","Sulfate permease family;; STAS domain","Low affinity sulfate transporter 3 OS=Stylosanthes hamata OX=37660 GN=ST3 PE=2 SV=1","Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20054 PE=3 SV=1","P","Inorganic ion transport and metabolism","low affinity sulfate transporter 3 [Sesamum indicum]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112249.graph_c0",162,4.22,151,2.87,140,2.9,75,1.54,91,2.14,89,1.82,1.21e-08,-1.136066537,"down","--","--","--","K10406|8.3e-72|mtr:MTR_5g096570|K10406 kinesin family member C2/C3 | (RefSeq) kinesin heavy chain, putative","--","--","Plant protein of unknown function (DUF868)","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021906001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375404 [Olea europaea var. sylvestris]","--","--"]
["c95153.graph_c0",636,22.26,452,14.87,390,14.17,4763,171.46,5958,247.07,6491,232.81,3.76e-38,3.16916602,"up","--","--","Molecular Function: catechol oxidase activity (GO:0004097);; Biological Process: pigment biosynthetic process (GO:0046148);; Molecular Function: metal ion binding (GO:0046872);; ","K00422|3.6e-272|sind:105176878|K00422 polyphenol oxidase [EC:1.10.3.1] | (RefSeq) polyphenol oxidase I, chloroplastic-like","--","--","Common central domain of tyrosinase;; Protein of unknown function (DUF_B2219);; Polyphenol oxidase middle domain","Polyphenol oxidase II, chloroplastic OS=Ipomoea batatas OX=4120 GN=co-2 PE=2 SV=2","Catechol oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27138 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","Catechol oxidase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Tyrosine metabolism (ko00350);; Isoquinoline alkaloid biosynthesis (ko00950)"]
["c101634.graph_c1",211,10.04,214,10.42,185,9.61,615,37.61,607,43.97,749,46.05,2.04e-31,1.362802836,"up","[C]","Energy production and conversion ","Molecular Function: phosphoenolpyruvate carboxykinase (ATP) activity (GO:0004612);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Biological Process: gluconeogenesis (GO:0006094);; ","K01610|4.4e-93|oeu:111391683|K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] | (RefSeq) phosphoenolpyruvate carboxykinase (ATP)-like isoform X1","--","--","Phosphoenolpyruvate carboxykinase","Phosphoenolpyruvate carboxykinase (ATP) 1 OS=Arabidopsis thaliana OX=3702 GN=PCK1 PE=1 SV=1","Phosphoenolpyruvate carboxykinase (ATP) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002546mg PE=3 SV=1","C","Energy production and conversion","phosphoenolpyruvate carboxykinase (ATP)-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Glycolysis / Gluconeogenesis (ko00010);; Citrate cycle (TCA cycle) (ko00020);; Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c98909.graph_c0",17,0.96,3,0.15,3,0.17,25,1.42,57,3.79,47,2.63,0.000266928,1.995995938,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09419|4.9e-119|oeu:111403872|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor B-3-like","[K]","Transcription ","HSF-type DNA-binding","Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1","HSF_DOMAIN domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_017419 PE=3 SV=1","K","Transcription","heat stress transcription factor B-3-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217);; molecular function: binding (GO:0005488)","--"]
["c102198.graph_c2",7,0.18,13,0.4,5,0.16,53,2.23,43,2.05,50,1.88,2.56e-06,2.105149672,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K12862|5.6e-92|aly:9311097|K12862 pleiotropic regulator 1 | (RefSeq) uncharacterized protein LOC9311097","[O]","Posttranslational modification, protein turnover, chaperones ","PDZ domain;; Trypsin-like peptidase domain;; Trypsin;; PDZ domain","Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DEGP10 PE=2 SV=1","Serine protease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22216 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protease Do-like 10, mitochondrial isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Spliceosome (ko03040)"]
["c92781.graph_c0",27,2.31,26,2.1,28,2.46,5,0.44,9,0.91,3,0.26,1.07e-05,-2.350254976,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97542.graph_c0",227,15.23,309,16.86,293,17.76,104,6.33,113,8.08,133,7.9,4.68e-20,-1.556028632,"down","[F]","Nucleotide transport and metabolism ","Molecular Function: adenylate kinase activity (GO:0004017);; Molecular Function: ATP binding (GO:0005524);; ","K00939|2.0e-121|oeu:111407691|K00939 adenylate kinase [EC:2.7.4.3] | (RefSeq) probable adenylate kinase 6, chloroplastic","[F]","Nucleotide transport and metabolism ","Adenylate kinase;; AAA domain;; AAA domain","Probable adenylate kinase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g39270 PE=2 SV=1","ATP:AMP phosphotransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10637 PE=3 SV=1","F","Nucleotide transport and metabolism","probable adenylate kinase 6, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Purine metabolism (ko00230);; Thiamine metabolism (ko00730)"]
["c109039.graph_c1",379,50.89,560,72.02,424,62.21,114,17.06,101,15.27,108,16.73,5.41e-53,-2.379640268,"down","[P]","Inorganic ion transport and metabolism ","Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; ","K22547|9.2e-49|nta:107815736|K22547 arsenate reductase [EC:1.20.4.1] | (RefSeq) thiosulfate sulfurtransferase 18-like","[P]","Inorganic ion transport and metabolism ","Rhodanese-like domain","Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1","Putative thiosulfate sulfurtransferase 18 isoform X2 OS=Davidia involucrata OX=16924 GN=Din_031906 PE=4 SV=1","P","Inorganic ion transport and metabolism","thiosulfate sulfurtransferase 18-like isoform X1 [Coffea eugenioides]","molecular function: catalytic activity (GO:0003824)","--"]
["c107043.graph_c0",5,0.15,4,0.12,4,0.14,47,1.62,52,2.03,46,1.56,5.96e-09,2.926759397,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K09843|5.3e-182|oeu:111397271|K09843 (+)-abscisic acid 8'-hydroxylase [EC:1.14.14.137] | (RefSeq) abscisic acid 8'-hydroxylase 4-like","[QI]","--","Cytochrome P450;; Cytochrome P450","Abscisic acid 8'-hydroxylase CYP707A1 OS=Solanum lycopersicum OX=4081 GN=CYP707A1 PE=2 SV=1","Cytochrome P450 CYP4/CYP19/CYP26 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02000 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","abscisic acid 8'-hydroxylase 4-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Carotenoid biosynthesis (ko00906)"]
["c111865.graph_c0",9,0.35,9,0.33,5,0.2,45,1.77,52,2.34,24,0.94,9.72e-05,1.952790774,"up","--","--","--","--","--","--","Fantastic Four meristem regulator","Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1","Protein FAF-like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc21495 PE=3 SV=1","S","Function unknown","protein FAF-like, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c116564.graph_c0",364,6.86,389,6.6,351,6.52,245,4.2,197,4.1,234,3.86,3.94e-16,-1.02722104,"down","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Biological Process: lipid glycosylation (GO:0030259);; ","K05841|3.9e-246|sind:105166897|K05841 sterol 3beta-glucosyltransferase [EC:2.4.1.173] | (RefSeq) sterol 3-beta-glucosyltransferase UGT80A2-like isoform X1","[GC]","--","Glycosyltransferase family 28 N-terminal domain;; UDP-glucoronosyl and UDP-glucosyl transferase","Sterol 3-beta-glucosyltransferase UGT80A2 OS=Arabidopsis thaliana OX=3702 GN=UGT80A2 PE=1 SV=1","Glyco_transf_28 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025585 PE=4 SV=1","--","--","sterol 3-beta-glucosyltransferase UGT80A2-like isoform X1 [Sesamum indicum]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c94504.graph_c0",98,17.01,145,23.59,130,23.05,69,12.27,77,15.71,78,13.76,4.07e-06,-1.041412009,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109811.graph_c0",5,0.45,2,0.15,10,0.5,29,1.33,25,0.95,28,1.3,0.002059122,1.756031093,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20359|3.5e-91|eus:EUTSA_v10006389mg|K20359 PRA1 family protein 1 | (RefSeq) hypothetical protein","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1","Putative leucine-rich repeat receptor-like protein kinase imk3 OS=Nicotiana attenuata OX=49451 GN=IMK3_0 PE=4 SV=1","T","Signal transduction mechanisms","probable leucine-rich repeat receptor-like protein kinase IMK3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111832.graph_c1",142,5.16,198,7.88,142,4.54,1983,64.86,1921,69.68,2317,71.18,2.86e-236,3.357933945,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: ATP binding (GO:0005524);; Biological Process: glycogen biosynthetic process (GO:0005978);; Molecular Function: glucose-1-phosphate adenylyltransferase activity (GO:0008878);; Cellular Component: chloroplast (GO:0009507);; Biological Process: starch biosynthetic process (GO:0019252);; ","K00975|4.2e-144|oeu:111391975|K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] | (RefSeq) glucose-1-phosphate adenylyltransferase large subunit 1-like","[M]","Cell wall/membrane/envelope biogenesis ","Nucleotidyl transferase;; Nucleotidyl transferase","Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum OX=4113 GN=AGPS1 PE=1 SV=1","Glucose-1-phosphate adenylyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15214 PE=3 SV=1","H","Coenzyme transport and metabolism","glucose-1-phosphate adenylyltransferase large subunit 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c93660.graph_c0",20,2.34,35,4.04,26,3.21,129,13.45,157,19.02,146,14.54,3.42e-14,2.058325987,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: photosystem I (GO:0009522);; Biological Process: photosynthetic electron transport chain (GO:0009767);; Cellular Component: integral component of membrane (GO:0016021);; ","K14332|1.0e-77|oeu:111373133|K14332 photosystem I subunit PsaO | (RefSeq) photosystem I subunit O","--","--","--","Photosystem I subunit O OS=Arabidopsis thaliana OX=3702 GN=PSAO PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00023914001 PE=4 SV=1","S","Function unknown","photosystem I subunit O [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Photosynthesis (ko00195)"]
["c103243.graph_c0",1168,42.49,1427,50.52,1173,45.09,412,15.13,365,15.28,448,15.76,6.75e-104,-1.939386817,"down","--","--","--","--","--","--","--","Protein TWIN LOV 1 OS=Arabidopsis thaliana OX=3702 GN=TLP1 PE=1 SV=2","Putative LOV domain-containing protein OS=Chionanthus retusus OX=126362 PE=2 SV=1","T","Signal transduction mechanisms","putative LOV domain-containing protein [Chionanthus retusus]","--","--"]
["c109275.graph_c0",11192,639.16,11172,602.22,10354,608.08,7351,430.88,5762,384.39,6444,374.1,4.15e-65,-1.064614006,"down","[C]","Energy production and conversion ","Cellular Component: mitochondrial inner membrane (GO:0005743);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Molecular Function: succinate dehydrogenase (ubiquinone) activity (GO:0008177);; Molecular Function: electron transfer activity (GO:0009055);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; Molecular Function: 3 iron, 4 sulfur cluster binding (GO:0051538);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K00235|1.1e-27|oeu:111385552|K00235 succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1] | (RefSeq) succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like","[C]","Energy production and conversion ","--","Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2","Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Striga asiatica OX=4170 GN=STAS_24564 PE=3 SV=1","C","Energy production and conversion","succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: electron carrier activity (GO:0009055);; molecular function: binding (GO:0005488)","Citrate cycle (TCA cycle) (ko00020);; Oxidative phosphorylation (ko00190);; Carbon metabolism (ko01200)"]
["c106731.graph_c3",1,0.04,2,0.08,1,0.05,30,0.97,40,1.21,35,1.15,2.25e-08,3.726107298,"up","--","--","--","--","--","--","NPH3 family","BTB/POZ domain-containing protein At3g08570 OS=Arabidopsis thaliana OX=3702 GN=At3g08570 PE=2 SV=2","BTB/POZ domain-containing protein At3g08570-like OS=Nicotiana sylvestris OX=4096 GN=LOC104231947 PE=3 SV=1","S","Function unknown","BTB/POZ domain-containing protein At3g08570-like [Olea europaea var. sylvestris]","--","--"]
["c83953.graph_c0",2,0.29,2,0.27,2,0.29,176,25.94,228,38.54,233,34.09,1.45e-31,5.858421769,"up","--","--","--","--","--","--","Pollen protein Ole e 1 like","Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00468 PE=3 SV=1","S","Function unknown","pollen allergen Che a 1-like [Olea europaea var. sylvestris]","--","--"]
["c113527.graph_c1",35,0.96,28,1.43,21,1.17,132,4.58,98,3.07,150,4.15,6.31e-11,1.809884358,"up","--","--","Molecular Function: voltage-gated potassium channel activity (GO:0005249);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: regulation of ion transmembrane transport (GO:0034765);; ","K21867|2.0e-248|oeu:111387477|K21867 potassium channel | (RefSeq) potassium channel AKT1-like","[PT]","--","Cyclic nucleotide-binding domain;; Ankyrin repeats (many copies);; Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeat;; KHA, dimerisation domain of potassium ion channel;; Ankyrin repeats (many copies);; Ankyrin repeats (3 copies);; Ankyrin repeat;; Ankyrin repeat;; Ankyrin repeats (many copies)","Potassium channel AKT1 OS=Arabidopsis thaliana OX=3702 GN=AKT1 PE=1 SV=2","Uncharacterized protein (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_39015 PE=3 SV=1","--","--","potassium channel AKT1-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c91993.graph_c1",120,8.54,123,8.26,104,7.61,344,25.04,374,31.19,402,29.1,1.51e-19,1.362172947,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity (GO:0016740);; ","--","--","--","--","Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=ROD1 PE=1 SV=1","Putative phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Davidia involucrata OX=16924 GN=Din_038901 PE=4 SV=1","S","Function unknown","phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c106302.graph_c1",871,38.09,1017,42.85,959,45.44,523,25.05,524,29.96,509,24.69,1.12e-35,-1.188406285,"down","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Glycosyltransferase Family 4;; Glycosyl transferases group 1;; Glycosyl transferases group 1","--","Glyco_trans_4-like_N domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013561 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","uncharacterized protein LOC111393507 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111500.graph_c2",23,6.18,30,7.98,42,12.66,18,5.38,15,4.41,16,4.33,0.005333447,-1.221119275,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","--","--","HTH myb-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_01772 PE=3 SV=1","--","--","protein PHR1-LIKE 1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c111565.graph_c0",10,0.2,8,0.16,6,0.12,46,1.2,72,1.77,67,1.41,7.27e-09,2.494214663,"up","[I]","Lipid transport and metabolism ","Molecular Function: phospholipase D activity (GO:0004630);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: phosphatidylcholine metabolic process (GO:0046470);; Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);; ","K01115|0.0e+00|oeu:111401550|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D alpha 4","[I]","Lipid transport and metabolism ","Phospholipase D C terminal;; Phospholipase D Active site motif;; PLD-like domain;; C2 domain","Phospholipase D alpha 4 OS=Arabidopsis thaliana OX=3702 GN=PLDALPHA4 PE=2 SV=1","Phospholipase D OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10958 PE=3 SV=1","I","Lipid transport and metabolism","phospholipase D alpha 4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)"]
["c109731.graph_c2",2279,80.85,2571,85.96,2288,83.14,163,7.29,134,7.14,170,7.43,0,-4.247542924,"down","--","--","Biological Process: protein polyubiquitination (GO:0000209);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: amine metabolic process (GO:0009308);; Biological Process: cytokinin metabolic process (GO:0009690);; Biological Process: regulation of abscisic acid-activated signaling pathway (GO:0009787);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: auxin metabolic process (GO:0009850);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: positive regulation of signal transduction (GO:0009967);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: positive regulation of cell communication (GO:0010647);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: membrane (GO:0016020);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity (GO:0016740);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: positive regulation of signaling (GO:0023056);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Biological Process: cellular hormone metabolic process (GO:0034754);; Biological Process: protein modification process (GO:0036211);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: positive regulation of response to stimulus (GO:0048584);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: protein K63-linked ubiquitination (GO:0070534);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Biological Process: regulation of response to stress (GO:0080134);; Biological Process: negative regulation of response to water deprivation (GO:0080148);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: regulation of response to alcohol (GO:1901419);; Biological Process: positive regulation of response to alcohol (GO:1901421);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: regulation of cellular response to alcohol (GO:1905957);; Biological Process: positive regulation of cellular response to alcohol (GO:1905959);; Biological Process: regulation of response to water deprivation (GO:2000070);; ","K16280|4.3e-36|oeu:111392477|K16280 E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RGLG2-like isoform X1","[T]","Signal transduction mechanisms ","--","E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1","RING-type domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006456 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: biological regulation (GO:0065007)","--"]
["c103956.graph_c0",16,1.03,17,1.06,17,1.79,164,12.71,176,15.41,153,11.6,2.23e-24,2.916751824,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","K20043|3.2e-25|aip:107640400|K20043 clathrin coat assembly protein AP180 | (RefSeq) putative clathrin assembly protein At5g35200","--","--","Dof domain, zinc finger","Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1","dof zinc finger protein DOF5.3-like OS=Juglans regia OX=51240 GN=LOC108995318 PE=4 SV=1","K","Transcription","dof zinc finger protein DOF5.7-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c113682.graph_c0",15,0.45,29,0.82,18,0.7,405,17.11,316,16.22,470,20.87,2.61e-61,3.873576768,"up","--","--","--","K08504|2.0e-08|jre:108995124|K08504 blocked early in transport 1 | (RefSeq) bet1-like SNARE 1-1","[R]","General function prediction only ","Endonuclease/Exonuclease/phosphatase family","--","uncharacterized protein LOC108992418 OS=Juglans regia OX=51240 GN=LOC108992418 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111365549 [Olea europaea var. sylvestris]","--","SNARE interactions in vesicular transport (ko04130)"]
["c113121.graph_c1",73,1.32,62,0.99,52,1.06,38,0.67,30,0.62,37,0.66,0.000206174,-1.128040336,"down","--","--","Biological Process: response to hypoxia (GO:0001666);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: isoprenoid metabolic process (GO:0006720);; Biological Process: terpenoid metabolic process (GO:0006721);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: gibberellin metabolic process (GO:0009685);; Biological Process: gibberellin biosynthetic process (GO:0009686);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: response to sucrose (GO:0009744);; Biological Process: response to hexose (GO:0009746);; Biological Process: response to fructose (GO:0009750);; Biological Process: carbohydrate mediated signaling (GO:0009756);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to metal ion (GO:0010038);; Biological Process: response to iron ion (GO:0010039);; Biological Process: regulation of ethylene-activated signaling pathway (GO:0010104);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Biological Process: organic acid biosynthetic process (GO:0016053);; Biological Process: diterpenoid metabolic process (GO:0016101);; Biological Process: diterpenoid biosynthetic process (GO:0016102);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: signaling (GO:0023052);; Biological Process: negative regulation of signaling (GO:0023057);; Cellular Component: organelle subcompartment (GO:0031984);; Biological Process: response to monosaccharide (GO:0034284);; Biological Process: response to disaccharide (GO:0034285);; Biological Process: protein modification process (GO:0036211);; Biological Process: response to decreased oxygen levels (GO:0036293);; Biological Process: regulation of development, heterochronic (GO:0040034);; Cellular Component: nuclear outer membrane-endoplasmic reticulum membrane network (GO:0042175);; Biological Process: response to chemical (GO:0042221);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: hormone biosynthetic process (GO:0042446);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete endoplasmic reticulum part (GO:0044432);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: protein autophosphorylation (GO:0046777);; Biological Process: regulation of timing of meristematic phase transition (GO:0048506);; Biological Process: regulation of meristem development (GO:0048509);; Biological Process: regulation of timing of transition from vegetative to reproductive phase (GO:0048510);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of multicellular organismal process (GO:0051239);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: regulation of phosphorelay signal transduction system (GO:0070297);; Biological Process: negative regulation of phosphorelay signal transduction system (GO:0070298);; Biological Process: response to oxygen levels (GO:0070482);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to inorganic substance (GO:0071241);; Biological Process: cellular response to metal ion (GO:0071248);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to carbohydrate stimulus (GO:0071322);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: endoplasmic reticulum subcompartment (GO:0098827);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of intracellular signal transduction (GO:1902531);; Biological Process: negative regulation of intracellular signal transduction (GO:1902532);; Biological Process: regulation of multicellular organismal development (GO:2000026);; Biological Process: regulation of stem cell division (GO:2000035);; Biological Process: regulation of post-embryonic root development (GO:2000069);; Biological Process: regulation of root development (GO:2000280);; ","K14510|7.8e-16|mcha:111013655|K14510 serine/threonine-protein kinase CTR1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase CTR1","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; PB1 domain;; Protein kinase domain","Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1","Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_038391 PE=4 SV=1","T","Signal transduction mechanisms","probable serine/threonine-protein kinase DDB_G0278509 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: biological regulation (GO:0065007)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c116135.graph_c0",13,1.06,18,1.72,9,1.26,65,5.12,68,4.61,88,7.24,1.67e-08,2.066105365,"up","--","--","Molecular Function: phosphatidate cytidylyltransferase activity (GO:0004605);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: CDP-diacylglycerol biosynthetic process (GO:0016024);; ","K00981|2.8e-29|sind:105174908|K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] | (RefSeq) phosphatidate cytidylyltransferase 1 isoform X1","[I]","Lipid transport and metabolism ","Cytidylyltransferase family","Phosphatidate cytidylyltransferase 1 OS=Solanum tuberosum OX=4113 GN=CDS1 PE=1 SV=1","Phosphatidate cytidylyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04114 PE=3 SV=1","I","Lipid transport and metabolism","CDP-diacylglycerol synthase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Glycerophospholipid metabolism (ko00564);; Phosphatidylinositol signaling system (ko04070)"]
["c110507.graph_c0",53,2.62,59,2.78,71,3.61,11,0.59,7,0.4,12,0.6,4.63e-13,-2.815825155,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109727.graph_c0",72,2.85,53,1.93,55,2.11,243,9.34,194,8.65,255,9.95,1.01e-15,1.597208204,"up","[L]","Replication, recombination and repair ","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; ","K10260|9.0e-18|ota:OT_ostta09g00430|K10260 F-box and WD-40 domain protein 7 | (RefSeq) WD40/YVTN repeat-like-containing domain","--","--","U-box domain","U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1","RING-type E3 ubiquitin transferase OS=Davidia involucrata OX=16924 GN=Din_004297 PE=4 SV=1","H","Coenzyme transport and metabolism","U-box domain-containing protein 26-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ubiquitin mediated proteolysis (ko04120)"]
["c90488.graph_c0",52,3.16,68,3.88,50,3.13,347,23.25,347,26.47,360,23.97,3.11e-38,2.293846301,"up","--","--","--","--","--","--","--","--","--","--","--","vegetative cell wall protein gp1-like [Olea europaea var. sylvestris]","--","--"]
["c81483.graph_c0",102,11.41,95,10.01,68,7.8,307,35.19,424,55.68,463,52.69,3.3e-23,1.83746732,"up","--","--","--","--","--","--","Protein of unknown function, DUF538","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_03630 PE=4 SV=1","S","Function unknown","uncharacterized protein At5g01610-like [Olea europaea var. sylvestris]","--","--"]
["c75751.graph_c0",22,3.32,16,2.27,10,1.54,80,12.37,112,19.86,139,21.33,1.6e-12,2.386626085,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Hydrophobic seed protein;; Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","36.4 kDa proline-rich protein OS=Solanum lycopersicum OX=4081 GN=TPRP-F1 PE=2 SV=1","Putative 36.proline-rich protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_008663 PE=4 SV=1","S","Function unknown","36.4 kDa proline-rich protein-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c115088.graph_c0",584,11.82,674,16.58,547,10.74,1778,34.95,1636,31.71,1950,31.72,7.41e-60,1.246817168,"up","--","--","Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; ","K02937|5.3e-130|oeu:111367995|K02937 large subunit ribosomal protein L7e | (RefSeq) 60S ribosomal protein L7-4-like isoform X1","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal L30 N-terminal domain;; Ribosomal protein L30p/L7e","60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1","60S ribosomal protein L7 OS=Striga asiatica OX=4170 GN=STAS_04124 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L7-4-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c101858.graph_c4",29,2.77,24,2.15,18,1.75,172,16.89,208,23.13,170,16.43,1.8e-22,2.590597772,"up","--","--","Molecular Function: GTPase activator activity (GO:0005096);; Biological Process: signal transduction (GO:0007165);; ","--","[T]","Signal transduction mechanisms ","--","Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1","Rho GTPase-activating protein OS=Striga asiatica OX=4170 GN=STAS_17759 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","rho GTPase-activating protein 6-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","--"]
["c106071.graph_c0",1403,33.56,1586,35.97,1520,37.53,314,7.69,219,6.14,227,5.53,4.69e-157,-2.882595736,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH162 OS=Arabidopsis thaliana OX=3702 GN=BHLH162 PE=1 SV=1","BHLH domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_012370 PE=4 SV=1","K","Transcription","transcription factor bHLH162-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c95225.graph_c0",49,2.5,50,2.33,44,2.37,136,6.92,163,9.58,146,7.54,2.63e-08,1.303186767,"up","--","--","Molecular Function: metal ion binding (GO:0046872);; ","K18753|3.2e-29|nau:109229089|K18753 butyrate response factor | (RefSeq) mRNA decay activator protein ZFP36L2-like","--","--","--","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014834001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111409768 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c116520.graph_c0",1569,50,1582,47.97,1436,47.37,853,27.29,788,28.35,803,24.91,2.56e-60,-1.226699831,"down","[T]","Signal transduction mechanisms ","Biological Process: cell division (GO:0051301);; ","K01147|6.1e-12|vra:106774033|K01147 exoribonuclease II [EC:3.1.13.1] | (RefSeq) uncharacterized protein LOC106774033","--","--","--","--","Cell division protein DivIB OS=Gossypium australe OX=47621 GN=EPI10_028343 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111390751 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c103232.graph_c0",2,0.11,7,0.32,7,0.42,24,1.23,50,2.96,66,3.47,1.15e-06,2.573916067,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: MAP kinase kinase activity (GO:0004708);; Molecular Function: ATP binding (GO:0005524);; ","K04368|4.5e-186|sind:105173561|K04368 mitogen-activated protein kinase kinase 1 [EC:2.7.12.2] | (RefSeq) mitogen-activated protein kinase kinase 6","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana OX=3702 GN=MKK6 PE=1 SV=1","Mitogen-activated protein kinase kinase (MAP2K) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13039 PE=3 SV=1","T","Signal transduction mechanisms","Mitogen-activated protein kinase kinase (MAP2K) [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: signal transducer activity (GO:0004871);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c105231.graph_c0",147,6.41,189,7.98,163,7.85,570,27,542,30.25,678,32.72,8.34e-33,1.51141973,"up","--","--","Biological Process: regulation of monopolar cell growth (GO:0051513);; ","--","--","--","--","Protein LONGIFOLIA 2 OS=Arabidopsis thaliana OX=3702 GN=LNG2 PE=1 SV=1","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_003815 PE=4 SV=1","S","Function unknown","protein LONGIFOLIA 1 isoform X1 [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007)","--"]
["c102333.graph_c1",24,1.66,22,1.69,21,1.77,5,0.36,9,0.77,9,0.67,0.001132261,-1.719360311,"down","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: signaling (GO:0023052);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; ","K13457|9.4e-23|ini:109158907|K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like","[T]","Signal transduction mechanisms ","NB-ARC domain;; AAA domain;; Rx N-terminal domain","Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RPP13L2 PE=3 SV=1","Putative disease resistance protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_34907 PE=4 SV=1","T","Signal transduction mechanisms","disease resistance protein RPP13-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c90086.graph_c0",86,27.15,84,23,66,20.23,418,117.5,603,184.73,610,164.59,1.31e-43,2.45187674,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37897 PE=4 SV=1","--","--","uncharacterized protein LOC115978256 [Quercus lobata]","--","--"]
["c101586.graph_c0",159,21.72,188,24.43,140,21.85,88,10.6,79,12.34,93,11.05,2.69e-10,-1.213673048,"down","--","--","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; ","--","--","--","--","--","ACB domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_35367 PE=3 SV=1","I","Lipid transport and metabolism","acyl-CoA-binding domain-containing protein 4-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117710.graph_c0",42,1.2,42,0.91,43,1.09,0,0,4,0.94,7,0.69,1.78e-11,-3.53383473,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K05909|9.6e-95|ghi:107887550|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-2-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; gag-polypeptide of LTR copia-type;; Reverse transcriptase (RNA-dependent DNA polymerase);; Reverse transcriptase (RNA-dependent DNA polymerase)","Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_032727 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c105625.graph_c2",139,2.54,118,2.04,95,1.79,0,0,1,0.02,0,0,8.55e-24,-6.755764518,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0134370 PE=4 SV=1","--","--","uncharacterized protein LOC111402777 [Olea europaea var. sylvestris]","--","--"]
["c103921.graph_c2",304,17.26,323,20.6,293,18.72,898,58.1,868,64.49,994,63.99,2.14e-39,1.258942232,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; Molecular Function: 1-ethyladenine demethylase activity (GO:0103053);; ","--","--","--","Protein of unknown function (DUF4057);; Protein of unknown function (DUF4057)","--","DNA oxidative demethylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25410 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111376389 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c97608.graph_c1",129,7.71,148,8.46,127,5.28,2,0.17,1,0.1,4,0.34,1.2e-31,-5.68824726,"down","--","--","Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K14491|2.1e-17|obr:102714513|K14491 two-component response regulator ARR-B family | (RefSeq) two-component response regulator ORR26","[K]","Transcription ","Myb-like DNA-binding domain","Two-component response regulator ORR26 OS=Oryza sativa subsp. japonica OX=39947 GN=RR26 PE=3 SV=2","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_07713 PE=4 SV=1","K","Transcription","two-component response regulator ORR21-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Plant hormone signal transduction (ko04075)"]
["c88531.graph_c0",2640,197.78,3139,221.32,2726,210.49,1836,141.13,1581,142.31,1775,139.95,1.14e-54,-1.032704158,"down","--","--","--","--","--","--","--","Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2","Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G019700 PE=4 SV=1","S","Function unknown","thylakoid lumenal 17.4 kDa protein, chloroplastic-like isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c101772.graph_c0",60,3.58,89,5.44,69,3.69,274,22.32,257,22.49,277,20.93,1.42e-17,1.556172263,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c62296.graph_c0",1,0.14,0,0,3,0.46,43,6.37,68,11.53,48,7.08,1.52e-11,4.287347196,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00703 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111386318 [Olea europaea var. sylvestris]","--","--"]
["c99671.graph_c1",0,0,0,0,0,0,41,1.99,28,1.6,53,2.61,2.25e-10,5.214797201,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1","Putative B-box zinc finger family protein isoform 2 OS=Davidia involucrata OX=16924 GN=Din_011958 PE=3 SV=1","S","Function unknown","putative zinc finger protein At1g68190 isoform X1 [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c103840.graph_c0",4,0.3,4,0.27,3,0.26,27,1.86,33,2.62,43,2.96,2.94e-06,2.629753959,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: cellular process (GO:0009987);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: protein modification process (GO:0036211);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: organic substance metabolic process (GO:0071704);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; ","K20115|7.3e-20|oeu:111396000|K20115 [pyruvate, phosphate dikinase]-phosphate phosphotransferase / [pyruvate, phosphate dikinase] kinase [EC:2.7.4.27 2.7.11.32] | (RefSeq) pyruvate, phosphate dikinase regulatory protein 1, chloroplastic isoform X1","--","--","Kinase/pyrophosphorylase","Pyruvate, phosphate dikinase regulatory protein 2 OS=Arabidopsis thaliana OX=3702 GN=RP2 PE=1 SV=1","Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000278 PE=3 SV=1","S","Function unknown","hypothetical protein HYC85_017699 [Camellia sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","--"]
["c115015.graph_c3",66,6.17,63,4.38,37,2.85,31,3.81,21,4.18,36,4.34,0.000452488,-1.202034731,"down","--","--","Cellular Component: Golgi transport complex (GO:0017119);; ","K20295|1.3e-23|ccav:112516484|K20295 conserved oligomeric Golgi complex subunit 8 | (RefSeq) conserved oligomeric Golgi complex subunit 8","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Conserved oligomeric Golgi complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=COG8 PE=1 SV=1","Conserved oligomeric Golgi complex subunit 8 OS=Brassica campestris OX=3711 GN=BRAA03T09873Z PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","hypothetical protein F2Q69_00000475 [Brassica cretica]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","--"]
["c91682.graph_c0",3,0.24,2,0.16,5,0.41,24,2.01,27,2.55,25,2.05,0.000153535,2.313020143,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111389065 [Olea europaea var. sylvestris]","--","--"]
["c116777.graph_c0",509,8.9,293,5.09,291,6.06,219,3.53,113,2.24,163,2.69,0.000106332,-1.421916856,"down","--","--","--","--","--","--","--","Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1","Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05907 PE=4 SV=1","S","Function unknown","pollen-specific leucine-rich repeat extensin-like protein 3 [Olea europaea var. sylvestris]","--","--"]
["c99663.graph_c0",186,9.57,251,12.39,207,10.95,630,33.32,590,35.58,682,35.62,4.5e-25,1.235565113,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: pectin catabolic process (GO:0045490);; Molecular Function: metal ion binding (GO:0046872);; ","K01728|3.6e-180|oeu:111377512|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 4","--","--","Pectate lyase","Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1","Pectate lyase OS=Vitis vinifera OX=29760 GN=VITISV_005608 PE=3 SV=1","E","Amino acid transport and metabolism","probable pectate lyase 4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Pentose and glucuronate interconversions (ko00040)"]
["c117791.graph_c0",211,2.09,227,2.14,210,2.15,107,1.09,108,1.25,105,1.06,2.75e-15,-1.327781989,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","K22804|5.6e-32|bna:106442438|K22804 structural maintenance of chromosomes protein 6 | (RefSeq) structural maintenance of chromosomes protein 6B-like","[R]","General function prediction only ","zinc-binding in reverse transcriptase;; Domain of unknown function (DUF4283);; Reverse transcriptase-like;; RNase H;; Reverse transcriptase (RNA-dependent DNA polymerase)","Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_013796 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC116146622 [Pistacia vera]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c115601.graph_c0",439,13.9,415,11.83,359,12.69,122,3.94,32,1.71,53,1.84,9.81e-08,-2.67796154,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: monooxygenase activity (GO:0004497);; Cellular Component: chloroplast (GO:0009507);; Biological Process: photorespiration (GO:0009853);; Molecular Function: ribulose-bisphosphate carboxylase activity (GO:0016984);; Biological Process: reductive pentose-phosphate cycle (GO:0019253);; ","K01601|7.6e-279|tcc:9978124|K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] | (RefSeq) rbcL, ThcaC_p028; ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit","--","--","Ribulose bisphosphate carboxylase large chain, catalytic domain;; Ribulose bisphosphate carboxylase large chain, N-terminal domain","Ribulose bisphosphate carboxylase large chain OS=Jasminum nudiflorum OX=126431 GN=rbcL PE=3 SV=1","Ribulose bisphosphate carboxylase large chain OS=Fraxinus sp. OR-2019 OX=2591849 GN=rbcL PE=3 SV=1","C","Energy production and conversion","ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Fraxinus sp. OR-2019]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c100774.graph_c0",47,5.35,50,4.83,53,5.89,31,3.06,17,1.77,23,2.31,0.000106669,-1.36242699,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","--","--","Integrase catalytic domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001990 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC113693887 [Coffea arabica]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c89596.graph_c0",6,0.45,5,0.36,4,0.31,37,2.85,22,1.94,34,2.6,0.000116206,2.105887127,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: 5'-3' exoribonuclease activity (GO:0004534);; Cellular Component: nucleus (GO:0005634);; Biological Process: mRNA processing (GO:0006397);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","--","5'-3' exoribonuclease OS=Coffea canephora OX=49390 GN=GSCOC_T00024673001 PE=3 SV=1","--","--","5'-3' exoribonuclease 3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c78942.graph_c2",27,4.28,39,5.81,26,3.92,17,3.03,11,2.36,18,3.34,0.004042822,-1.258391862,"down","--","--","--","K22849|6.8e-54|oeu:111407454|K22849 diacylglycerol O-acyltransferase 3, plant [EC:2.3.1.20] | (RefSeq) diacylglycerol O-acyltransferase 3, cytosolic","--","--","--","--","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_011813 PE=4 SV=1","--","--","diacylglycerol O-acyltransferase 3, cytosolic [Olea europaea var. sylvestris]","--","Glycerolipid metabolism (ko00561)"]
["c102760.graph_c0",13,0.98,23,1.69,14,1.08,58,4.47,40,3.53,67,5.21,0.000538517,1.338982889,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98365.graph_c0",33,2.27,50,3.41,49,3.56,6,0.39,3,0.22,2,0.13,4.87e-12,-3.586307708,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108588.graph_c1",75,8.35,83,8.7,80,9.13,1419,161.75,1361,177.77,1390,157.32,2.23e-201,3.794043844,"up","[E]","Amino acid transport and metabolism ","Molecular Function: prephenate dehydratase activity (GO:0004664);; Biological Process: L-phenylalanine biosynthetic process (GO:0009094);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: arogenate dehydratase activity (GO:0047769);; ","K05359|9.9e-114|oeu:111387860|K05359 arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51] | (RefSeq) arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like","[E]","Amino acid transport and metabolism ","Prephenate dehydratase","Arogenate dehydratase 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADT4 PE=1 SV=1","Arogenate dehydratase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16512 PE=4 SV=1","E","Amino acid transport and metabolism","arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c96891.graph_c0",764,95.75,737,87.01,695,89.82,383,49.72,406,61.07,465,60.7,1.48e-30,-1.128535245,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","--","--","--","Reverse transcriptase-like","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_011083 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111403348 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c111322.graph_c0",15,0.43,5,0.15,9,0.28,63,1.9,55,1.92,69,2.12,5.43e-08,2.246589442,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K16279|6.0e-06|mcha:111009969|K16279 E3 ubiquitin-protein ligase KEG [EC:2.7.11.1 2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase KEG","[R]","General function prediction only ","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Domain of unknown function;; Ankyrin repeat;; Ankyrin repeat","Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana OX=3702 GN=At5g02620 PE=1 SV=1","ANK_REP_REGION domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00028134001 PE=4 SV=1","S","Function unknown","ankyrin repeat-containing protein At5g02620-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116487.graph_c0",375,7.68,364,9.2,336,6.22,1427,31.13,1302,31.01,1529,35.62,6.47e-86,1.658697046,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K11498|0.0e+00|oeu:111374916|K11498 centromeric protein E | (RefSeq) kinesin-like protein KIN-7D, mitochondrial isoform X1","[Z]","Cytoskeleton ","Zinc finger, C3HC4 type (RING finger);; Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KIN7D PE=2 SV=1","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01006 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-7D, mitochondrial isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c95804.graph_c1",32,4.46,38,4.97,34,4.85,90,12.84,82,13.42,108,15.3,9.84e-05,1.0802274,"up","--","--","Biological Process: endocytosis (GO:0006897);; Cellular Component: membrane (GO:0016020);; ","K20069|2.6e-70|oeu:111402476|K20069 adaptin ear-binding coat-associated protein 1/2 | (RefSeq) uncharacterized protein At1g03900-like isoform X1","[S]","Function unknown ","Protein of unknown function (DUF1681)","Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 PE=1 SV=1","DUF1681 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22394 PE=4 SV=1","S","Function unknown","uncharacterized protein At1g03900-like isoform X1 [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020)","--"]
["c81829.graph_c0",23,2.87,39,4.58,19,2.43,1,0.13,11,1.61,7,0.89,0.000132992,-2.166417386,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02877|9.5e-79|qsu:112010312|K02877 large subunit ribosomal protein L15e | (RefSeq) 60S ribosomal protein L15","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal L15","60S ribosomal protein L15-1 OS=Picea mariana OX=3335 GN=SB61 PE=2 SV=1","Ribosomal protein L15 (Fragment) OS=Anthurium amnicola OX=1678845 GN=RpL15 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","hypothetical protein RclHR1_04420004 [Rhizophagus clarus]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c99678.graph_c0",255,18.09,327,22.13,313,23,824,45.75,705,46.57,776,42.41,4.24e-20,1.037900914,"up","--","--","--","--","--","--","bHLH-MYC and R2R3-MYB transcription factors N-terminal","Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RSS3 PE=1 SV=1","bHLH-MYC_N domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00034888001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111385761 [Olea europaea var. sylvestris]","--","--"]
["c97130.graph_c0",13,0.48,10,0.35,6,0.23,114,4.27,137,5.88,105,3.91,7.55e-19,3.186784355,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xyloglucan 6-xylosyltransferase activity (GO:0033843);; ","K08238|3.7e-93|csat:104756211|K08238 xyloglucan 6-xylosyltransferase [EC:2.4.2.39] | (RefSeq) xyloglucan 6-xylosyltransferase 4-like","[GM]","--","galactosyl transferase GMA12/MNN10 family","Putative glycosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=GT7 PE=2 SV=1","Subunit of Golgi mannosyltransferase complex OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06874 PE=3 SV=1","--","--","putative glycosyltransferase 7 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c71529.graph_c1",38,2.69,42,2.96,32,2.45,9,0.61,7,0.6,7,0.46,7.71e-08,-2.449248873,"down","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K12835|5.2e-13|cmax:111493042|K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 24 isoform X1","--","--","WRKY DNA -binding domain","Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1","WRKY domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08102 PE=3 SV=1","K","Transcription","probable WRKY transcription factor 48 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","Spliceosome (ko03040)"]
["c112793.graph_c0",35,2.42,34,2.11,29,1.7,178,8.55,171,10,215,9.68,9.44e-21,2.167364271,"up","--","--","--","--","--","--","Domain of unknown function (DUF702)","Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_009443 PE=3 SV=1","S","Function unknown","protein LATERAL ROOT PRIMORDIUM 1-like [Olea europaea var. sylvestris]","--","--"]
["c61438.graph_c1",0,0,1,0.16,1,0.17,24,4.14,32,6.33,45,7.7,1.53e-08,4.172312458,"up","--","--","Biological Process: protein polyubiquitination (GO:0000209);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of mitotic metaphase/anaphase transition (GO:0030071);; Biological Process: anaphase-promoting complex-dependent catabolic process (GO:0031145);; Molecular Function: ubiquitin conjugating enzyme activity (GO:0061631);; ","K06688|1.4e-64|oeu:111403425|K06688 ubiquitin-conjugating enzyme E2 C [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 19-like","[O]","Posttranslational modification, protein turnover, chaperones ","Ubiquitin-conjugating enzyme","Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1","UBC20 (Fragment) OS=Solanum lycopersicum OX=4081 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin-conjugating enzyme E2 19-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824)","Ubiquitin mediated proteolysis (ko04120)"]
["c94698.graph_c0",428,31.83,435,29.73,401,29.37,206,12.26,159,10.77,197,11.69,4.79e-32,-1.487895515,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02899|3.5e-79|oeu:111388273|K02899 large subunit ribosomal protein L27 | (RefSeq) uncharacterized protein LOC111388273","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal L27 protein","50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL27 PE=1 SV=2","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00028688001 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111388273 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c96596.graph_c0",258,19.83,245,17.78,214,16.92,71,5.55,129,11.56,136,10.57,4.75e-12,-1.395934698,"down","--","--","--","K03860|5.6e-06|nnu:104608881|K03860 phosphatidylinositol N-acetylglucosaminyltransferase subunit Q | (RefSeq) N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1-like","--","--","Gibberellin regulated protein","Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1","gibberellin-regulated protein 9-like OS=Nicotiana sylvestris OX=4096 GN=LOC104244441 PE=3 SV=1","S","Function unknown","gibberellin-regulated protein 11-like [Olea europaea var. sylvestris]","--","Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (ko00563)"]
["c108976.graph_c0",53,2.09,57,2.12,46,1.86,278,11.25,330,15.25,407,16.41,6.93e-34,2.353882118,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K09588|1.6e-250|oeu:111380564|K09588 cytochrome P450 family 90 subfamily A polypeptide 1 [EC:1.14.-.-] | (RefSeq) cytochrome P450 90A1","[QI]","--","Cytochrome P450","Cytochrome P450 90A1 OS=Arabidopsis thaliana OX=3702 GN=CYP90A1 PE=1 SV=1","Cytochrome P450 CYP4/CYP19/CYP26 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17729 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 90A1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Brassinosteroid biosynthesis (ko00905)"]
["c105759.graph_c0",99,4.63,104,5.09,82,3.86,223,12.76,241,19.09,287,18.88,1.52e-09,1.067194881,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; Biological Process: RNA modification (GO:0009451);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","K23541|2.1e-92|pda:103710599|K23541 Ca2+/H+ antiporter, TMEM165/GDT1 family | (RefSeq) pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like","[R]","General function prediction only ","DYW family of nucleic acid deaminases;; PPR repeat;; PPR repeat family;; PPR repeat","Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2","DYW_deaminase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001176mg PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c97561.graph_c1",32,1.03,48,1.54,42,1.5,11,0.33,11,0.37,17,0.59,5.18e-06,-1.8808847,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: biological_process (GO:0008150);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to blue light (GO:0009637);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of flower development (GO:0009909);; Biological Process: positive regulation of flower development (GO:0009911);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: rhythmic process (GO:0048511);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: positive regulation of post-embryonic development (GO:0048582);; Biological Process: regulation of shoot system development (GO:0048831);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: positive regulation of developmental process (GO:0051094);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of multicellular organismal process (GO:0051239);; Biological Process: positive regulation of multicellular organismal process (GO:0051240);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of multicellular organismal development (GO:2000026);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of reproductive process (GO:2000241);; Biological Process: positive regulation of reproductive process (GO:2000243);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K12116|0.0e+00|oeu:111399114|K12116 flavin-binding kelch repeat F-box protein 1 | (RefSeq) adagio protein 3-like","--","--","Galactose oxidase, central domain;; Galactose oxidase, central domain;; Kelch motif;; Kelch motif;; Kelch motif;; Kelch motif;; PAS domain;; F-box domain","Adagio protein 3 OS=Arabidopsis thaliana OX=3702 GN=ADO3 PE=1 SV=1","Putative LOV domain-containing protein OS=Olea europaea OX=4146 PE=2 SV=1","T","Signal transduction mechanisms","adagio protein 3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: biological regulation (GO:0065007);; biological process: rhythmic process (GO:0048511);; biological process: response to stimulus (GO:0050896)","Circadian rhythm - plant (ko04712)"]
["c111758.graph_c0",20,1.09,18,0.89,14,0.75,50,2.83,73,5.92,84,5.74,8.21e-06,1.613978161,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92326.graph_c0",4,0.6,3,0.41,4,0.6,53,8.11,44,7.73,38,5.77,1.33e-08,3.018740699,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109718.graph_c0",207,7.81,248,8.85,205,7.95,84,3.2,79,3.49,109,4.18,1.84e-19,-1.590184359,"down","--","--","--","--","[S]","Function unknown ","Uncharacterized conserved protein (DUF2054)","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011613mg PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111384358 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c107514.graph_c0",8,0.52,3,0.19,3,0.2,39,2.6,38,2.86,52,3.48,2.89e-07,2.651568571,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105657.graph_c0",0,0,0,0,0,0,73,2.8,94,3.89,130,5.6,7.37e-17,6.348527331,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: transmembrane receptor protein tyrosine kinase activity (GO:0004714);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","SBP domain","Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946 GN=SPL12 PE=2 SV=1","Putative squamosa promoter-binding-like protein 3 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_021809 PE=4 SV=1","S","Function unknown","squamosa promoter-binding-like protein 12 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c102198.graph_c1",74,4.38,63,3.53,59,3.59,36,2.09,27,1.81,33,1.93,1.18e-05,-1.321863606,"down","--","--","--","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_11600 PE=4 SV=1","--","--","uncharacterized protein LOC111402499 [Olea europaea var. sylvestris]","--","--"]
["c99895.graph_c0",38,2.51,43,2.68,40,2.71,219,14.77,158,12.21,199,13.35,2.52e-17,1.898017014,"up","--","--","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: metal ion binding (GO:0046872);; ","K17508|1.4e-159|oeu:111381416|K17508 protein phosphatase PTC7 [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 26 isoform X1","[T]","Signal transduction mechanisms ","Protein phosphatase 2C;; Stage II sporulation protein E (SpoIIE);; Protein phosphatase 2C","Probable protein phosphatase 2C 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0164600 PE=1 SV=1","Protein phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_30016 PE=3 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 26 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c107705.graph_c0",32,1.26,41,1.19,30,0.97,64,2.69,96,3.45,110,3.37,0.000583601,1.045983398,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","K12309|1.4e-84|lja:Lj3g3v0323160.1|K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) Lj3g3v0323160.1; -","[R]","General function prediction only ","Zinc finger, C2H2 type;; Zinc-finger of C2H2 type;; Zinc-finger double-stranded RNA-binding","Zinc finger protein ENHYDROUS OS=Arabidopsis thaliana OX=3702 GN=ENY PE=1 SV=1","Zinc finger protein JACKDAW-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_01051 PE=4 SV=1","S","Function unknown","protein indeterminate-domain 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Galactose metabolism (ko00052);; Other glycan degradation (ko00511);; Glycosaminoglycan degradation (ko00531);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - ganglio series (ko00604)"]
["c114424.graph_c1",123,6.23,66,2.73,46,2.57,2,0.03,3,0.08,2,0.03,3.69e-19,-4.85893182,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115119.graph_c0",1272,15.61,1314,15.2,1105,13.92,4854,59.43,4008,56.85,4691,57.42,1e-130,1.55203302,"up","--","--","--","K03255|0.0e+00|oeu:111401822|K03255 protein TIF31 | (RefSeq) protein TSS isoform X1","[R]","General function prediction only ","Tetratricopeptide repeat;; Translation initiation factor eIF3 subunit 135;; Tetratricopeptide repeat;; Mitochondrial function, CLU-N-term;; Tetratricopeptide repeat;; Ataxin-2 C-terminal region","Protein TSS OS=Arabidopsis thaliana OX=3702 GN=TSS PE=1 SV=1","Tetratricopeptide repeat-like superfamily protein OS=Erythranthe lewisii OX=69919 GN=RCP2-L1 PE=4 SV=1","S","Function unknown","protein TSS isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c109018.graph_c0",79,3.41,55,1.73,65,2.7,177,6.93,173,7.75,195,7.45,9.24e-08,1.115203571,"up","[I]","Lipid transport and metabolism ","Molecular Function: 3-hydroxyisobutyryl-CoA hydrolase activity (GO:0003860);; ","K05605|4.3e-145|oeu:111383469|K05605 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4] | (RefSeq) 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial","[I]","Lipid transport and metabolism ","Enoyl-CoA hydratase/isomerase;; Enoyl-CoA hydratase/isomerase","3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60510 PE=1 SV=1","Enoyl-CoA hydratase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05373 PE=3 SV=1","I","Lipid transport and metabolism","3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Valine, leucine and isoleucine degradation (ko00280);; beta-Alanine metabolism (ko00410);; Propanoate metabolism (ko00640);; Carbon metabolism (ko01200)"]
["c102765.graph_c0",4,0.18,3,0.13,9,0.39,68,3.11,63,3.88,56,2.55,9.12e-11,3.017387587,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: flower development (GO:0009908);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: reproductive shoot system development (GO:0090567);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","--","--","TCP family transcription factor","Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1","CYC OS=Sinningia speciosa OX=121486 GN=CYC PE=2 SV=1","K","Transcription","transcription factor CYCLOIDEA-like [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)","--"]
["c111967.graph_c2",191,10.75,203,10.79,158,9.19,601,34.88,464,30.8,528,30.41,6.69e-20,1.201894374,"up","--","--","--","--","[I]","Lipid transport and metabolism ","CRAL/TRIO, N-terminal domain","--","Phosphatidylinositol transfer protein PDR16 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06391 PE=4 SV=1","I","Lipid transport and metabolism","phosphatidylinositol transfer protein 3-like [Olea europaea var. sylvestris]","--","--"]
["c103045.graph_c1",166,7.85,173,7.73,123,5.99,59,2.85,75,4.15,71,3.42,6.37e-12,-1.468077576,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: carotenoid dioxygenase activity (GO:0010436);; Biological Process: carotene catabolic process (GO:0016121);; Molecular Function: metal ion binding (GO:0046872);; ","K09840|5.6e-233|oeu:111386602|K09840 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] | (RefSeq) 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Retinal pigment epithelial membrane protein","9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Solanum lycopersicum OX=4081 GN=NCED2 PE=2 SV=1","9-cis-epoxycarotenoid dioxygenase 3 protein family isoform 2 OS=Nicotiana tabacum OX=4097 GN=NCED3-2 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Carotenoid biosynthesis (ko00906)"]
["c107142.graph_c0",164,8.32,144,6.97,130,6.81,61,3.24,38,2.28,55,2.87,7.56e-16,-1.809925247,"down","--","--","Cellular Component: cytochrome b6f complex (GO:0009512);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (GO:0045158);; ","--","--","--","--","Cytochrome b6-f complex subunit 6 OS=Atropa belladonna OX=33113 GN=petL PE=3 SV=1","Cytochrome b6-f complex subunit 6 OS=Paederia scandens OX=284589 GN=petL PE=3 SV=1","C","Energy production and conversion","cytochrome b6/f complex subunit VI [Paederia scandens]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane part (GO:0044425);; molecular function: electron carrier activity (GO:0009055)","--"]
["c117685.graph_c0",7,0.17,26,0.6,8,0.2,58,1.43,36,1.05,61,1.5,0.000768274,1.512690553,"up","--","--","--","K12447|8.9e-112|dzi:111312249|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) UDP-sugar pyrophosphorylase-like isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","PQQ-like domain;; PQQ enzyme repeat;; PQQ-like domain","Putative acyl-activating enzyme 19 OS=Arabidopsis thaliana OX=3702 GN=At5g35930 PE=2 SV=1","uncharacterized protein LOC109005459 OS=Juglans regia OX=51240 GN=LOC109005459 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","UDP-sugar pyrophosphorylase-like isoform X1 [Durio zibethinus]","--","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c106572.graph_c0",32,0.6,25,0.53,42,0.81,305,5.11,219,4.16,300,4.95,9.26e-33,2.684472523,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02838 PE=4 SV=1","--","--","uncharacterized protein LOC111373580 [Olea europaea var. sylvestris]","--","--"]
["c110735.graph_c0",0,0,1,0.02,1,0.02,22,0.48,27,0.65,25,0.52,8.22e-07,3.767212021,"up","--","--","Cellular Component: peroxisome (GO:0005777);; Biological Process: regulation of gene expression (GO:0010468);; ","K17573|3.5e-27|pvu:PHAVU_001G217000g|K17573 meiosis arrest female protein 1 | (RefSeq) hypothetical protein","--","--","NYN domain;; OST-HTH/LOTUS domain;; OST-HTH Associated domain","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_033743 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111397135 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c101001.graph_c2",13,1.42,3,0.31,5,0.68,24,3.1,24,3.11,32,3.41,0.009715159,1.461246959,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96071.graph_c1",9,1.33,7,1.25,14,2.21,52,5.54,61,7.18,61,6.42,3.53e-07,2.104980427,"up","--","--","Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: metal ion binding (GO:0046872);; ","K15711|1.1e-15|ppp:112276323|K15711 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 2.3.2.27] | (RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1","[KL]","--","SNF2 family N-terminal domain","Helicase-like transcription factor CHR28 OS=Arabidopsis thaliana OX=3702 GN=CHR28 PE=1 SV=1","Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07569 PE=3 SV=1","--","--","helicase-like transcription factor CHR28 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488)","--"]
["c116429.graph_c0",293,4.18,303,4.31,268,4.27,1003,14.83,911,15.35,1067,15.35,9.59e-54,1.459767858,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175);; Biological Process: mitochondrial RNA catabolic process (GO:0000957);; Biological Process: mitochondrial mRNA catabolic process (GO:0000958);; Biological Process: mitochondrial RNA processing (GO:0000963);; Biological Process: mitochondrial RNA 3'-end processing (GO:0000965);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: RNA catabolic process (GO:0006401);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: chloroplast stroma (GO:0009570);; ","K00962|0.0e+00|oeu:111412972|K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] | (RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic","[R]","General function prediction only ","3' exoribonuclease family, domain 1;; 3' exoribonuclease family, domain 2;; Polyribonucleotide nucleotidyltransferase, RNA binding domain;; Oxidoreductase FAD-binding domain;; Oxidoreductase NAD-binding domain;; S1 RNA binding domain;; KH domain","Polyribonucleotide nucleotidyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNP1 PE=1 SV=1","Polynucleotide phosphorylase 1 OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000949mg PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: organelle part (GO:0044422)","RNA degradation (ko03018)"]
["c112402.graph_c0",8,0.18,9,0.19,3,0.07,121,2.74,106,2.75,146,3.29,2.25e-22,3.729006014,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","gag-polypeptide of LTR copia-type","--","OSJNBa0033G05.13 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0033G05.13 PE=4 SV=2","T","Signal transduction mechanisms","OSJNBa0033G05.13 [Oryza sativa Japonica Group]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c92625.graph_c1",80,7.89,101,9.38,93,9.41,578,58.37,483,55.88,473,47.49,1.18e-43,2.15085857,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytosol (GO:0005829);; Biological Process: thiamine biosynthetic process (GO:0009228);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: transferase activity, transferring pentosyl groups (GO:0016763);; Biological Process: thiazole biosynthetic process (GO:0052837);; ","K03146|1.6e-120|oeu:111389379|K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] | (RefSeq) thiamine thiazole synthase 2, chloroplastic","[R]","General function prediction only ","Thi4 family;; FAD dependent oxidoreductase;; FAD binding domain;; NAD(P)-binding Rossmann-like domain;; Pyridine nucleotide-disulphide oxidoreductase","Thiamine thiazole synthase 2, chloroplastic OS=Vitis vinifera OX=29760 GN=THI1-2 PE=3 SV=1","Thiamine thiazole synthase, chloroplastic OS=Coffea canephora OX=49390 GN=THI1 PE=3 SV=1","H","Coenzyme transport and metabolism","thiamine thiazole synthase 2, chloroplastic [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)","Thiamine metabolism (ko00730)"]
["c105950.graph_c1",53,2.79,58,2.83,63,3.11,11,0.58,14,0.96,10,0.49,2.42e-11,-2.52726939,"down","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20623|2.7e-126|oeu:111402275|K20623 typhasterol/6-deoxotyphasterol 2alpha-hydroxylase | (RefSeq) cytochrome P450 71A1-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450;; Cytochrome P450","Dimethylnonatriene synthase OS=Zea mays OX=4577 GN=CYP92C5 PE=1 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009725 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 71A1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Brassinosteroid biosynthesis (ko00905)"]
["c115780.graph_c1",1,0.04,1,0.04,1,0.04,22,0.88,30,1.37,33,1.31,3.15e-07,3.664055308,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05666|3.3e-248|oeu:111375175|K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2 | (RefSeq) ABC transporter C family member 10-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter transmembrane region","ABC transporter C family member 10 OS=Arabidopsis thaliana OX=3702 GN=ABCC10 PE=2 SV=2","Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08266 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter C family member 10-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c114847.graph_c0",70,2.95,65,2.47,50,1.99,348,14.43,443,22.05,532,23.78,4.96e-41,2.492549958,"up","--","--","--","K12447|3.1e-34|dzi:111312249|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) UDP-sugar pyrophosphorylase-like isoform X1","--","--","--","--","Uncharacterized protein (Fragment) OS=Populus alba OX=43335 GN=D5086_0000296990 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","hypothetical protein D5086_0000296990, partial [Populus alba]","--","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c108151.graph_c0",36,2.27,30,1.57,29,2.01,116,8.27,114,10.48,108,7.5,3.68e-08,1.482871943,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: TIM22 mitochondrial import inner membrane insertion complex (GO:0042721);; Biological Process: protein insertion into mitochondrial inner membrane (GO:0045039);; ","K17790|7.2e-79|oeu:111403095|K17790 mitochondrial import inner membrane translocase subunit TIM22 | (RefSeq) mitochondrial import inner membrane translocase subunit TIM22-4","[U]","Intracellular trafficking, secretion, and vesicular transport ","Tim17/Tim22/Tim23/Pmp24 family","Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis thaliana OX=3702 GN=TIM22-1 PE=1 SV=1","Mitochondrial import inner membrane translocase, subunit TIM22 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10226 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import inner membrane translocase subunit TIM22-4 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c116137.graph_c3",12,0.43,28,1.63,14,0.87,76,4.36,79,4.76,95,6.99,9.85e-08,1.832766881,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11800 PE=4 SV=1","S","Function unknown","DUF724 domain-containing protein 7-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c106782.graph_c0",170,4.39,160,3.93,116,3.09,361,9.53,353,10.67,419,11.02,9.97e-12,1.01818763,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: primary amine oxidase activity (GO:0008131);; Biological Process: amine metabolic process (GO:0009308);; Molecular Function: quinone binding (GO:0048038);; ","K00276|0.0e+00|sind:105164214|K00276 primary-amine oxidase [EC:1.4.3.21] | (RefSeq) primary amine oxidase","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Copper amine oxidase, enzyme domain;; Copper amine oxidase, N3 domain","Primary amine oxidase OS=Arabidopsis thaliana OX=3702 GN=At1g62810 PE=2 SV=1","Amine oxidase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002006mg PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","primary amine oxidase [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Glycine, serine and threonine metabolism (ko00260);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; beta-Alanine metabolism (ko00410);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)"]
["c101517.graph_c0",542,29.77,611,32.63,522,30.53,200,12.47,213,12.77,239,15.13,8.84e-48,-1.676281953,"down","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: protein targeting (GO:0006605);; Biological Process: intracellular protein transport (GO:0006886);; Cellular Component: membrane (GO:0016020);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; ","K01803|2.0e-23|sbi:8057784|K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] | (RefSeq) triosephosphate isomerase, cytosolic","[R]","General function prediction only ","C2 domain","Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1","C2 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015742mg PE=4 SV=1","S","Function unknown","elicitor-responsive protein 3-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020)","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Inositol phosphate metabolism (ko00562);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c78154.graph_c0",22,2.25,33,3.18,22,2.31,7,0.73,11,1.3,14,1.4,0.002565455,-1.482917621,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114769.graph_c0",23,0.66,12,0.32,10,0.29,50,1.47,45,1.5,53,1.55,0.001085442,1.333590541,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99186.graph_c2",40,1.81,44,1.96,30,1.49,130,5.96,152,8.08,136,6.28,9.95e-10,1.535454054,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; ","K11294|6.5e-81|oeu:111381776|K11294 nucleolin | (RefSeq) heterogeneous nuclear ribonucleoprotein A3 homolog 1-like isoform X1","[K]","Transcription ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Nucleolin 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0620700 PE=2 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033582 PE=4 SV=1","A","RNA processing and modification","heterogeneous nuclear ribonucleoprotein A3 homolog 1-like isoform X4 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c95010.graph_c0",26,3.08,26,2.9,30,3.64,11,1.33,12,1.67,12,1.44,0.001571329,-1.46350797,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101853.graph_c0",12,0.39,0,0,5,0.13,32,0.98,32,1.07,41,1.27,0.00026211,2.079258022,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K13199|1.1e-34|mtr:MTR_7g081660|K13199 plasminogen activator inhibitor 1 RNA-binding protein | (RefSeq) nuclear RNA-binding-like protein","--","--","Subtilase family;; Peptidase inhibitor I9;; PA domain;; Fibronectin type-III domain;; Subtilase family","Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana OX=3702 GN=SBT5.4 PE=1 SV=1","Subtilisin-like protease OS=Dorcoceras hygrometricum OX=472368 GN=F511_34752 PE=3 SV=1","G","Carbohydrate transport and metabolism","subtilisin-like protease SBT5.4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c116697.graph_c0",546,16.12,539,14.66,491,14.71,282,8.35,272,9.24,274,8,5.35e-29,-1.244647211,"down","--","--","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K13993|1.1e-16|oeu:111380496|K13993 HSP20 family protein | (RefSeq) 17.3 kDa class I heat shock protein-like","[QR]","--","non-haem dioxygenase in morphine synthesis N-terminal;; Hsp20/alpha crystallin family","Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1","Fe2OG dioxygenase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014577001 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","codeine O-demethylase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Protein processing in endoplasmic reticulum (ko04141)"]
["c97184.graph_c1",67,13.87,53,10.49,44,9.16,24,5.99,19,5.05,18,3.73,1.64e-06,-1.686987957,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111708.graph_c1",26,4.98,34,2.16,35,3.44,23,10.43,12,2.21,15,4.33,0.005985438,-1.192878481,"down","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cell communication (GO:0007154);; Biological Process: biological_process (GO:0008150);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cellular process (GO:0009987);; Biological Process: response to extracellular stimulus (GO:0009991);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: cellular response to extracellular stimulus (GO:0031668);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: response to chemical (GO:0042221);; Biological Process: cellular response to water deprivation (GO:0042631);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to abiotic stimulus (GO:0071214);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to water stimulus (GO:0071462);; Biological Process: cellular response to osmotic stress (GO:0071470);; Biological Process: cellular response to salt stress (GO:0071472);; Biological Process: cellular response to external stimulus (GO:0071496);; Biological Process: cellular response to environmental stimulus (GO:0104004);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","K10523|9.9e-20|oeu:111388540|K10523 speckle-type POZ protein | (RefSeq) BTB/POZ and MATH domain-containing protein 2-like","[DR]","--","--","BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1","Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_11483 PE=4 SV=1","D","Cell cycle control, cell division, chromosome partitioning","BTB/POZ and MATH domain-containing protein 2-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987)","--"]
["c99257.graph_c0",0,0,0,0,0,0,56,4.14,70,6.51,86,6.48,2.99e-14,5.935614501,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","SPARK","Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029315 PE=4 SV=1","S","Function unknown","uncharacterized GPI-anchored protein At4g28100-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112575.graph_c0",7,0.16,27,0.65,6,0.15,87,2.2,93,3.02,95,2.56,9.5e-10,2.373532858,"up","--","--","--","K18213|0.0e+00|oeu:111366141|K18213 proteinaceous RNase P [EC:3.1.26.5] | (RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like","[R]","General function prediction only ","Protein-only RNase P;; Pentacotripeptide-repeat region of PRORP;; PPR repeat family;; Pentatricopeptide repeat domain;; PPR repeat","Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1","Ribonuclease P (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034264 PE=3 SV=1","V","Defense mechanisms","proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Olea europaea var. sylvestris]","--","RNA transport (ko03013)"]
["c94755.graph_c0",147,6.16,160,6.41,126,5.45,432,18.86,391,19.53,435,19.37,8.21e-19,1.21187954,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; ","K00430|8.7e-122|oeu:111391409|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase P7","--","--","Peroxidase","Peroxidase 52 OS=Arabidopsis thaliana OX=3702 GN=PER52 PE=2 SV=1","Peroxidase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00000340pilonHSYRG01564 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","peroxidase P7 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754)","Phenylpropanoid biosynthesis (ko00940)"]
["c105905.graph_c0",24,0.48,20,0.38,16,0.33,70,1.44,49,1.15,78,1.58,0.000128024,1.339969069,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99003.graph_c0",74,4.62,62,3.18,69,3.66,172,8.58,176,10.23,183,9.39,3.53e-07,1.03893875,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","K10752|8.0e-187|oeu:111410521|K10752 histone-binding protein RBBP4 | (RefSeq) WD-40 repeat-containing protein MSI2-like","[B]","Chromatin structure and dynamics ","Histone-binding protein RBBP4 or subunit C of CAF1 complex;; WD domain, G-beta repeat;; Anaphase-promoting complex subunit 4 WD40 domain","WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana OX=3702 GN=MSI2 PE=2 SV=1","Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08153 PE=3 SV=1","B","Chromatin structure and dynamics","WD-40 repeat-containing protein MSI2-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c96224.graph_c0",59,1.73,74,2.06,62,1.88,15,0.45,24,0.83,43,1.29,8.4e-06,-1.530911369,"down","--","--","--","K19042|2.6e-120|oeu:111377746|K19042 E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27] | (RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3","[O]","Posttranslational modification, protein turnover, chaperones ","Zinc finger, C3HC4 type (RING finger)","BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1","RING-type domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_007952 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable BOI-related E3 ubiquitin-protein ligase 3 [Olea europaea var. sylvestris]","--","--"]
["c97625.graph_c1",96,6.82,74,5.13,86,6.56,231,16.58,264,21.74,253,18.09,7.51e-11,1.21514675,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: GTPase activity (GO:0003924);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Molecular Function: nickel cation binding (GO:0016151);; ","K03189|4.0e-148|oeu:111370927|K03189 urease accessory protein | (RefSeq) urease accessory protein G","--","--","CobW/HypB/UreG, nucleotide-binding domain","Urease accessory protein G OS=Arabidopsis thaliana OX=3702 GN=UREG PE=2 SV=1","urease accessory protein G-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107825031 PE=3 SV=1","--","--","urease accessory protein G [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","--"]
["c114314.graph_c0",229,5.31,274,6.64,282,7.09,1124,20.57,918,18.81,1268,23.1,2.32e-56,1.739549621,"up","--","--","Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: protein deubiquitination (GO:0016579);; Molecular Function: thiol-dependent ubiquitinyl hydrolase activity (GO:0036459);; Molecular Function: metal ion binding (GO:0046872);; ","K11855|4.6e-231|oeu:111389259|K11855 ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 15 isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","MYND finger;; Ubiquitin carboxyl-terminal hydrolase;; Ubiquitin carboxyl-terminal hydrolase;; Ubiquitin carboxyl-terminal hydrolase","Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana OX=3702 GN=UBP15 PE=1 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_010492 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin carboxyl-terminal hydrolase 15 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","--"]
["c101220.graph_c0",14,0.72,7,0.34,1,0.06,27,1.62,40,2.84,45,2.73,0.000504975,1.872335891,"up","--","--","Molecular Function: sulfotransferase activity (GO:0008146);; ","K22312|6.6e-94|qsu:112006014|K22312 hydroxyjasmonate sulfotransferase [EC:2.8.2.39] | (RefSeq) cytosolic sulfotransferase 15-like isoform X1","[R]","General function prediction only ","Sulfotransferase domain;; Sulfotransferase family","Cytosolic sulfotransferase 12 OS=Arabidopsis thaliana OX=3702 GN=SOT12 PE=1 SV=2","Sulfotransferase OS=Davidia involucrata OX=16924 GN=Din_042927 PE=3 SV=1","S","Function unknown","cytosolic sulfotransferase 12-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c116387.graph_c1",100,5.53,162,12.33,115,6.93,82,4.67,16,0.43,24,2.07,0.008661551,-1.720610478,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: beta-glucosidase activity (GO:0008422);; Biological Process: response to salt stress (GO:0009651);; Biological Process: glucosinolate catabolic process (GO:0019762);; ","K12695|7.4e-163|sind:105161651|K12695 raucaffricine beta-D-glucosidase / vomilenine glucosyltransferase [EC:3.2.1.125 2.4.1.219] | (RefSeq) beta-glucosidase-like","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolase family 1","Raucaffricine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=RG PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a018115mg PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-glucosidase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Indole alkaloid biosynthesis (ko00901)"]
["c117817.graph_c0",1080,13.58,1089,12.98,1011,13.13,298,3.84,241,3.57,273,3.5,8.08e-130,-2.287287898,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K09422|4.7e-231|oeu:111411667|K09422 transcription factor MYB, plant | (RefSeq) transcription factor GAMYB-like isoform X1","[K]","Transcription ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain;; Zinc knuckle;; gag-polypeptide of LTR copia-type","Transcription factor GAMYB OS=Oryza sativa subsp. indica OX=39946 GN=GAM1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4106 PE=4 SV=1","--","--","transcription factor GAMYB-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c115184.graph_c1",32,2.08,27,1.66,29,1.94,9,0.6,8,0.67,10,0.81,5.28e-05,-1.906556436,"down","[H]","Coenzyme transport and metabolism ","Biological Process: biological_process (GO:0008150);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to stimulus (GO:0050896);; ","K14487|5.2e-199|oeu:111411983|K14487 auxin responsive GH3 gene family | (RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1","--","--","GH3 auxin-responsive promoter","Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana OX=3702 GN=GH3.1 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25684 PE=3 SV=1","S","Function unknown","probable indole-3-acetic acid-amido synthetase GH3.1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c108091.graph_c0",3098,85.81,3578,89.7,3233,88.47,1234,48.88,1035,47.2,1168,46.25,3.22e-169,-1.848278188,"down","--","--","Cellular Component: Golgi membrane (GO:0000139);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: cell wall organization (GO:0071555);; ","K20783|1.2e-176|sind:105169615|K20783 arabinosyltransferase [EC:2.4.2.-] | (RefSeq) arabinosyltransferase RRA2-like","--","--","Nucleotide-diphospho-sugar transferase","Arabinosyltransferase RRA3 OS=Arabidopsis thaliana OX=3702 GN=RRA3 PE=2 SV=1","Glycosyltransferase OS=Prunus dulcis OX=3755 GN=Prudu_021933 PE=3 SV=1","G","Carbohydrate transport and metabolism","Nucleotide-diphospho-sugar transferase family protein [Prunus dulcis]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Other types of O-glycan biosynthesis (ko00514)"]
["c72080.graph_c0",1,0.24,9,1.84,8,1.91,31,7.33,29,7.43,38,8.64,0.000365526,1.940941875,"up","--","--","--","K14565|2.1e-55|oeu:111403302|K14565 nucleolar protein 58 | (RefSeq) probable nucleolar protein 5-2","[AJ]","--","NOP5NT (NUC127) domain","Probable nucleolar protein 5-2 OS=Arabidopsis thaliana OX=3702 GN=NOP5-2 PE=1 SV=1","Nop domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_019776 PE=3 SV=1","--","--","probable nucleolar protein 5-2 [Olea europaea var. sylvestris]","--","Ribosome biogenesis in eukaryotes (ko03008)"]
["c104010.graph_c0",88,6.21,94,8.68,107,6.99,232,17.27,230,19.94,297,21.96,3.52e-09,1.054834071,"up","[L]","Replication, recombination and repair ","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: DNA replication (GO:0006260);; Biological Process: base-excision repair (GO:0006284);; Molecular Function: 5'-3' exonuclease activity (GO:0008409);; Molecular Function: 5'-flap endonuclease activity (GO:0017108);; Biological Process: DNA replication, removal of RNA primer (GO:0043137);; ","K04799|6.6e-149|sind:105169015|K04799 flap endonuclease-1 [EC:3.-.-.-] | (RefSeq) flap endonuclease 1","[L]","Replication, recombination and repair ","XPG I-region","Flap endonuclease 1 OS=Glycine max OX=3847 GN=FEN1 PE=2 SV=1","Flap endonuclease 1 OS=Nyssa sinensis OX=561372 GN=FEN1 PE=3 SV=1","L","Replication, recombination and repair","hypothetical protein F0562_029158 [Nyssa sinensis]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)","DNA replication (ko03030);; Base excision repair (ko03410);; Non-homologous end-joining (ko03450)"]
["c89537.graph_c0",1428,88.59,1570,92.34,1536,98,111,6.93,79,5.56,122,7.51,1.72e-291,-4.173536592,"down","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: cell wall (GO:0005618);; Biological Process: xyloglucan metabolic process (GO:0010411);; Molecular Function: xyloglucan:xyloglucosyl transferase activity (GO:0016762);; Biological Process: cell wall biogenesis (GO:0042546);; Cellular Component: apoplast (GO:0048046);; Biological Process: cell wall organization (GO:0071555);; ","K08235|6.2e-87|oeu:111408989|K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207] | (RefSeq) probable xyloglucan endotransglucosylase/hydrolase protein 7","--","--","Glycosyl hydrolases family 16;; Xyloglucan endo-transglycosylase (XET) C-terminus","Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana OX=3702 GN=XTH6 PE=2 SV=2","Xyloglucan endotransglucosylase/hydrolase OS=Gossypium hirsutum OX=3635 GN=LOC107935242 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable xyloglucan endotransglucosylase/hydrolase protein 7 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: extracellular region (GO:0005576)","--"]
["c113567.graph_c0",41,2.45,56,3.16,43,2.64,22,1.34,8,0.56,8,0.49,7.26e-07,-2.093283453,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; Molecular Function: hydrolase activity (GO:0016787);; ","K15601|8.4e-70|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash010082 PE=4 SV=1","A","RNA processing and modification","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Apostasia shenzhenica]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","--"]
["c83549.graph_c0",648,85.98,617,76.96,612,83.32,261,35.47,236,36.77,270,36.43,2.64e-51,-1.610519729,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K08286|8.2e-88|oeu:111396851|K08286 protein-serine/threonine kinase [EC:2.7.11.-] | (RefSeq) serine/threonine-protein kinase D6PKL2-like","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Protein kinase G11A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_021818 PE=2 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038726001 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase D6PKL2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c92035.graph_c0",281,26.09,280,25.96,294,29.49,138,14.36,174,20.75,160,16.3,7.48e-14,-1.169106774,"down","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[S]","Function unknown ","ORMDL family","--","Putative membrane protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02727 PE=4 SV=1","S","Function unknown","ORM1-like protein 2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c89663.graph_c0",31,3.15,10,0.99,24,2.58,110,11.51,64,7.65,59,6.06,0.000174494,1.451551097,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","K04374|1.6e-29|mus:103997104|K04374 cyclic AMP-dependent transcription factor ATF-4 | (RefSeq) basic leucine zipper 61-like","--","--","bZIP transcription factor;; Basic region leucine zipper","Basic leucine zipper 34 OS=Arabidopsis thaliana OX=3702 GN=BZIP34 PE=1 SV=1","BZIP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06441 PE=4 SV=1","K","Transcription","basic leucine zipper 6-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","Protein processing in endoplasmic reticulum (ko04141)"]
["c117071.graph_c1",74,1.71,58,1.3,67,1.71,171,4.21,200,5.5,207,5.2,6.62e-09,1.202159736,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812);; Molecular Function: ATP binding (GO:0005524);; Biological Process: tRNA aminoacylation for protein translation (GO:0006418);; ","K01893|4.0e-255|oeu:111371293|K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] | (RefSeq) asparagine--tRNA ligase, cytoplasmic 2","[J]","Translation, ribosomal structure and biogenesis ","tRNA synthetases class II (D, K and N);; tRNA synthetases class II (D, K and N)","Asparagine--tRNA ligase, cytoplasmic 2 OS=Arabidopsis thaliana OX=3702 GN=SYNC2 PE=1 SV=2","Asparagine--tRNA ligase, cytoplasmic 2-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_39837 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","asparagine--tRNA ligase, cytoplasmic 2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c111211.graph_c0",12,0.49,25,1.99,21,1.96,415,18.51,406,20.34,433,18.92,2.8e-69,4.0514104,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111385241 [Olea europaea var. sylvestris]","--","--"]
["c31323.graph_c0",0,0,0,0,0,0,33,33.02,42,49.37,37,36.66,5.29e-10,5.132631029,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111385673 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c106273.graph_c0",44,4.01,68,6.73,64,5.7,23,3.11,26,2.85,45,4.5,0.000412238,-1.200411277,"down","--","--","Biological Process: sucrose metabolic process (GO:0005985);; Molecular Function: sucrose synthase activity (GO:0016157);; ","K00695|1.5e-61|oeu:111399809|K00695 sucrose synthase [EC:2.4.1.13] | (RefSeq) sucrose synthase","[M]","Cell wall/membrane/envelope biogenesis ","Sucrose synthase","Sucrose synthase OS=Solanum tuberosum OX=4113 PE=3 SV=1","Sucrose synthase OS=Phelipanche ramosa OX=46066 GN=Sus1 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","sucrose synthase [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c95789.graph_c2",45,9.75,44,9.87,48,11.22,150,28.08,131,27.58,159,24.51,5.46e-09,1.337452648,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Plant protein of unknown function","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03812 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_03812 [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109134.graph_c0",76,2.63,75,2.51,82,2.8,882,29.07,815,31.44,819,27.32,1.98e-110,3.094947338,"up","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; ","K19893|1.2e-196|oeu:111390995|K19893 glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 5","--","--","Glycosyl hydrolases family 17;; X8 domain;; Ubiquitin-conjugating enzyme","Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana OX=3702 GN=At4g31140 PE=2 SV=1","Glucan endo-1,3-beta-D-glucosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12029 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-glucosidase 5 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c110349.graph_c0",3,0.21,2,0.02,1,0.01,25,1.17,31,0.8,34,1.23,1.19e-06,3.115197159,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","--","[K]","Transcription ","KNOX2 domain;; KNOX1 domain;; Homeobox KN domain;; ELK domain;; Homeodomain","Homeobox protein knotted-1-like 2 OS=Malus domestica OX=3750 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027927 PE=3 SV=1","K","Transcription","homeotic protein knotted-1 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c99436.graph_c0",65,3.5,56,2.85,58,3.21,31,1.71,27,1.7,32,1.75,3.66e-05,-1.283863889,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101473.graph_c0",108,4.42,113,3.83,98,3.81,266,9.63,278,11.41,261,11.44,1.83e-09,1.010819086,"up","--","--","Biological Process: flower development (GO:0009908);; Molecular Function: hydrolase activity (GO:0016787);; Biological Process: cell differentiation (GO:0030154);; ","--","--","--","Frigida-like protein","FRIGIDA-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FRL3 PE=1 SV=1","FRIGIDA-like protein OS=Davidia involucrata OX=16924 GN=Din_038979 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","hypothetical protein F0562_007167 [Nyssa sinensis]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987)","--"]
["c113481.graph_c0",263,19.99,284,20.97,257,20.49,37,3.14,21,3.28,30,3.11,1.05e-59,-3.471939803,"down","--","--","Cellular Component: exosome (RNase complex) (GO:0000178);; Molecular Function: RNA binding (GO:0003723);; ","K03679|2.3e-13|cann:107863923|K03679 exosome complex component RRP4 | (RefSeq) exosome complex component RRP4 homolog","[A]","RNA processing and modification ","--","Exosome complex component RRP4 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP4 PE=1 SV=1","Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1","A","RNA processing and modification","hypothetical protein F0562_021309 [Nyssa sinensis]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","RNA degradation (ko03018)"]
["c99349.graph_c0",1,0.02,0,0,0,0,19,0.41,35,0.87,61,1.32,2.67e-09,4.644359952,"up","--","--","--","--","--","--","--","Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09586 PE=4 SV=1","S","Function unknown","protein CHUP1, chloroplastic-like [Olea europaea var. sylvestris]","--","--"]
["c114265.graph_c1",1498,67,1645,76.93,1354,66.17,242,11.11,232,12.53,261,13.45,1.13e-231,-2.927340794,"down","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to oxidative stress (GO:0006979);; Cellular Component: plant-type cell wall (GO:0009505);; Biological Process: lignin biosynthetic process (GO:0009809);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; ","K00430|3.1e-105|oeu:111367545|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 17-like","--","--","Peroxidase;; Peroxidase","Peroxidase 17 OS=Arabidopsis thaliana OX=3702 GN=PER17 PE=2 SV=1","Peroxidase OS=Coffea canephora OX=49390 GN=GSCOC_T00036573001 PE=3 SV=1","W","Extracellular structures","peroxidase 17-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c97693.graph_c0",26,1.14,25,1.14,12,0.62,84,3.46,76,3.43,67,2.63,1.36e-05,1.490679819,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Regulator of G protein signaling domain","Regulator of G-protein signaling 1 OS=Arabidopsis thaliana OX=3702 GN=RGS1 PE=1 SV=1","RGS domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00852 PE=4 SV=1","S","Function unknown","regulator of G-protein signaling 1 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112143.graph_c2",123,5.57,161,5.02,131,4.88,2413,68.07,1934,65.49,2313,69.03,2.55e-272,3.669148498,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92966.graph_c0",2,0.05,1,0.02,1,0.03,75,2.25,139,4.42,128,4.74,8.51e-20,5.34217208,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: gene silencing by RNA (GO:0031047);; ","K11593|0.0e+00|sind:105172206|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 4A-like","[J]","Translation, ribosomal structure and biogenesis ","Piwi domain;; N-terminal domain of argonaute;; PAZ domain;; Argonaute linker 1 domain;; Argonaute linker 2 domain","Protein argonaute 4A OS=Oryza sativa subsp. japonica OX=39947 GN=AGO4A PE=2 SV=1","Argonaute family protein OS=Striga asiatica OX=4170 GN=STAS_10840 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","argonaute family protein [Striga asiatica]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c93513.graph_c0",24,0.53,22,0.45,24,0.53,1069,23.43,934,23.44,1196,26.09,8.41e-157,5.132183993,"up","--","--","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: DNA integration (GO:0015074);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K13457|1.7e-74|pmum:103334684|K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like","[R]","General function prediction only ","Retrotransposon gag protein;; Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase","RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1","Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28609 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111412594 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Plant-pathogen interaction (ko04626)"]
["c84133.graph_c0",17,6.75,26,9.5,31,12.36,9,3.78,12,5.62,10,4.04,0.003388724,-1.470445098,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00001274001 PE=4 SV=1","--","--","unnamed protein product [Coffea canephora]","--","--"]
["c108084.graph_c0",3,0.35,4,0.2,4,0.24,41,3.42,54,3.91,58,5.84,7.2e-10,3.195420823,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: lyase activity (GO:0016829);; ","--","--","--","KDPG and KHG aldolase","--","Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G033500 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111412981 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c114260.graph_c0",20,0.46,29,0.66,23,0.59,6,0.14,4,0.11,8,0.2,7.29e-05,-2.137091644,"down","[T]","Signal transduction mechanisms ","Molecular Function: phosphorelay sensor kinase activity (GO:0000155);; Molecular Function: protein binding (GO:0005515);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: detection of visible light (GO:0009584);; Biological Process: red, far-red light phototransduction (GO:0009585);; Molecular Function: photoreceptor activity (GO:0009881);; Biological Process: protein-tetrapyrrole linkage (GO:0017006);; Biological Process: protein-chromophore linkage (GO:0018298);; Molecular Function: protein homodimerization activity (GO:0042803);; ","K12123|2.3e-81|vvi:100264019|K12123 phytochrome E | (RefSeq) PHYE; phytochrome E","--","--","Phytochrome region;; PAS fold;; PAS fold;; PAS fold","Phytochrome E OS=Ipomoea nil OX=35883 GN=PHYE PE=2 SV=1","Phytochrome OS=Primulina eburnea OX=1245227 GN=phyE PE=3 SV=1","H","Coenzyme transport and metabolism","phytochrome E [Primulina lutea]","molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c106663.graph_c1",0,0,3,0.22,1,0.08,67,5.38,84,7.72,69,5.5,4.12e-15,4.756698574,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","--","--","--","TCP family transcription factor","Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1","TCP domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_004380 PE=4 SV=1","K","Transcription","transcription factor TCP23-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","--"]
["c103430.graph_c2",6,0.26,4,0.15,14,0.75,90,4.14,113,6.16,94,4.57,1.75e-15,3.156716413,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G017628 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111409876 [Olea europaea var. sylvestris]","--","--"]
["c88619.graph_c0",95,29.64,102,29.47,92,30.15,336,99.99,351,120.38,353,104.54,6.02e-22,1.517930338,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02924|4.8e-23|oeu:111374565|K02924 large subunit ribosomal protein L39e | (RefSeq) 60S ribosomal protein L39-3","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal L39 protein","60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C PE=3 SV=1","60S ribosomal protein L39 OS=Glycine soja OX=3848 GN=D0Y65_041497 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L39 [Glycine soja]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c104855.graph_c0",11,0.4,8,0.34,1,0.04,49,2.06,61,2.79,60,2.52,2.68e-08,2.60409741,"up","--","--","Molecular Function: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity (GO:0050566);; Molecular Function: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (GO:0050567);; ","K02433|2.1e-27|apro:F751_6020|K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] | (RefSeq) Glutamyl-tRNA(Gln) amidotransferase subunit A","[I]","Lipid transport and metabolism ","CRAL/TRIO domain;; Divergent CRAL/TRIO domain","Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 OS=Arabidopsis thaliana OX=3702 GN=SFH13 PE=2 SV=1","Putative phosphatidylinositol/phosphatidylcholine transfer protein SFH13 OS=Davidia involucrata OX=16924 GN=Din_018442 PE=4 SV=1","I","Lipid transport and metabolism","phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c103374.graph_c0",85,6.16,79,5.75,65,4.97,279,20.29,245,21.06,290,21.13,1.58e-17,1.494197292,"up","--","--","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K19892|2.4e-109|oeu:111380127|K19892 glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39] | (RefSeq) glucan endo-1,3-beta-glucosidase 4-like","--","--","Glycosyl hydrolases family 17","Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1","Glucan endo-1,3-beta-glucosidase 4 OS=Dorcoceras hygrometricum OX=472368 GN=F511_20556 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-glucosidase 4-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Starch and sucrose metabolism (ko00500)"]
["c105503.graph_c0",26,2.45,24,1.47,25,2.03,8,1.82,6,1.34,5,1.79,5.07e-05,-2.123651046,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: regulation of cell shape (GO:0008360);; ","K11797|2.5e-12|oeu:111371335|K11797 PH-interacting protein | (RefSeq) bromodomain and WD repeat-containing protein 1","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000133mg PE=4 SV=1","S","Function unknown","bromodomain and WD repeat-containing protein 1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c79799.graph_c0",138,4.93,104,3.53,95,3.51,1569,57.19,1474,61.4,1783,64.4,3.3e-206,3.502660205,"up","--","--","Molecular Function: glycerol-3-phosphate O-acyltransferase activity (GO:0004366);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity (GO:0102420);; ","K13508|1.2e-225|sind:105172701|K13508 glycerol-3-phosphate acyltransferase [EC:2.3.1.15 2.3.1.198] | (RefSeq) glycerol-3-phosphate 2-O-acyltransferase 4","--","--","Acyltransferase;; haloacid dehalogenase-like hydrolase","Glycerol-3-phosphate 2-O-acyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GPAT4 PE=1 SV=1","Glycerol-3-phosphate 1-O-acyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21632 PE=4 SV=1","I","Lipid transport and metabolism","Glycerol-3-phosphate 1-O-acyltransferase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564)"]
["c96710.graph_c0",0,0,0,0,3,0.44,16,1.04,33,3.53,34,2.82,1.09e-06,3.580547234,"up","--","--","Biological Process: G protein-coupled receptor signaling pathway (GO:0007186);; ","--","--","--","GGL domain","Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=3702 GN=GG3 PE=2 SV=1","G protein gamma domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_045095 PE=4 SV=1","S","Function unknown","guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c107725.graph_c0",11,1.61,13,1.96,12,2,57,8.76,82,14.51,79,11.18,6.23e-09,2.191388854,"up","--","--","Cellular Component: plasmodesma (GO:0009506);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Salt stress response/antifungal","Plasmodesmata-located protein 7 OS=Arabidopsis thaliana OX=3702 GN=PDLP7 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011372mg PE=4 SV=1","S","Function unknown","cysteine-rich repeat secretory protein 60-like [Olea europaea var. sylvestris]","cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109788.graph_c0",254,5.91,216,4.02,202,4.3,1724,34.45,1606,37.15,1790,35.81,1.36e-169,2.600832279,"up","--","--","Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Molecular Function: metal ion binding (GO:0046872);; ","K00454|0.0e+00|oeu:111369299|K00454 lipoxygenase [EC:1.13.11.12] | (RefSeq) lipoxygenase 6, chloroplastic-like","--","--","Lipoxygenase;; PLAT/LH2 domain;; Lipoxygenase;; Lipoxygenase","Lipoxygenase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX6 PE=2 SV=1","Lipoxygenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01131 PE=3 SV=1","E","Amino acid transport and metabolism","lipoxygenase 6, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Linoleic acid metabolism (ko00591);; alpha-Linolenic acid metabolism (ko00592)"]
["c76472.graph_c0",0,0,0,0,0,0,419,23.81,415,26.74,499,27.7,1.16e-33,8.25617783,"up","--","--","--","--","--","--","Carbohydrate esterase, sialic acid-specific acetylesterase","Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2","SASA domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13866 PE=4 SV=1","S","Function unknown","probable carbohydrate esterase At4g34215 [Olea europaea var. sylvestris]","--","--"]
["c37994.graph_c0",757,145.49,859,154.54,898,176.1,6,1.18,5,1.13,3,0.59,4.5e-100,-7.50383749,"down","[S]","Function unknown ","Cellular Component: integral component of membrane (GO:0016021);; ","--","[R]","General function prediction only ","Proteolipid membrane potential modulator","Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2","Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004394 PE=3 SV=1","S","Function unknown","hydrophobic protein LTI6B-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112212.graph_c1",34,4.32,30,4.01,31,4.49,281,30.7,383,46.61,437,46.03,3.64e-46,3.167694631,"up","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22706|8.7e-17|pmum:103319663|K22706 (R)-mandelonitrile beta-glucosyltransferase [EC:2.4.1.354] | (RefSeq) 7-deoxyloganetin glucosyltransferase-like","[GC]","--","--","UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana OX=3702 GN=UGT83A1 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00020515001 PE=4 SV=1","--","--","UDP-glycosyltransferase 83A1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Cyanoamino acid metabolism (ko00460)"]
["c115355.graph_c0",93,11.91,127,14.42,95,11.63,62,5.72,53,7.92,71,16.17,6.51e-06,-1.067236853,"down","--","--","Biological Process: protein glycosylation (GO:0006486);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Biological Process: dolichol metabolic process (GO:0019348);; Cellular Component: integral component of endoplasmic reticulum membrane (GO:0030176);; Molecular Function: enzyme regulator activity (GO:0030234);; ","K09658|1.7e-36|oeu:111398800|K09658 dolichol phosphate-mannose biosynthesis regulatory protein | (RefSeq) dolichol-phosphate mannose synthase subunit 2 isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2)","Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DPMS2 PE=1 SV=1","Dolichol phosphate-mannose biosynthesis regulatory protein OS=Salvia splendens OX=180675 GN=DPM2 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","dolichol-phosphate mannose synthase subunit 2 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","N-Glycan biosynthesis (ko00510);; Glycosylphosphatidylinositol (GPI)-anchor biosynthesis (ko00563)"]
["c117155.graph_c0",249,3.81,234,3.37,204,3.17,837,15.63,789,16.34,861,14.68,5.96e-47,1.530142298,"up","--","--","Molecular Function: RNA ligase (ATP) activity (GO:0003972);; Biological Process: tRNA splicing, via endonucleolytic cleavage and ligation (GO:0006388);; ","--","--","--","Fungal tRNA ligase phosphodiesterase domain","tRNA ligase 1 OS=Arabidopsis thaliana OX=3702 GN=RNL PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_016631 PE=4 SV=1","S","Function unknown","tRNA ligase 1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108998.graph_c0",1007,26.83,1052,26.55,973,26.73,163,4.44,109,3.4,155,4.2,1.59e-174,-3.143512904,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K15333|1.2e-83|nsy:104224633|K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) uncharacterized protein LOC104224633","--","--","Subtilase family;; Fibronectin type-III domain;; Peptidase inhibitor I9;; PA domain","Subtilisin-like protease OS=Petunia hybrida OX=4102 GN=SBT PE=2 SV=1","Cucumisin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07640 PE=3 SV=1","G","Carbohydrate transport and metabolism","subtilisin-like protease SBT1.2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c115752.graph_c0",0,0,3,0.06,0,0,39,1.33,38,1.51,59,1.9,1.99e-10,4.302651573,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K12447|2.2e-96|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; Integrase core domain;; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5913 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein VITISV_035665 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c114880.graph_c1",26,0.54,22,0.54,16,0.37,97,2.24,88,3.19,112,3.16,1.22e-09,1.84321605,"up","--","--","--","--","--","--","Williams-Beuren syndrome DDT (WSD), D-TOX E motif;; DDT domain;; WSTF, HB1, Itc1p, MBD9 motif 1;; Tify domain binding domain","Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana OX=3702 GN=RLT3 PE=3 SV=1","DDT domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18165 PE=4 SV=1","K","Transcription","homeobox-DDT domain protein RLT3-like [Olea europaea var. sylvestris]","--","--"]
["c115378.graph_c0",520,22.53,456,18.7,530,23.68,1802,79.95,1559,80.04,1828,81.57,9.32e-62,1.454116536,"up","--","--","Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; ","K10258|2.5e-162|oeu:111397371|K10258 very-long-chain enoyl-CoA reductase [EC:1.3.1.93] | (RefSeq) very-long-chain enoyl-CoA reductase-like","[I]","Lipid transport and metabolism ","3-oxo-5-alpha-steroid 4-dehydrogenase","Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana OX=3702 GN=ECR PE=1 SV=1","S5A_REDUCTASE domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_31240 PE=3 SV=1","I","Lipid transport and metabolism","very-long-chain enoyl-CoA reductase-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Fatty acid elongation (ko00062);; Biosynthesis of unsaturated fatty acids (ko01040);; Fatty acid metabolism (ko01212)"]
["c110647.graph_c0",23,0.76,18,0.52,16,1.71,2,0.06,6,0.21,8,0.33,0.001138004,-1.939056955,"down","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|1.0e-57|pda:103720660|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) brassinosteroid LRR receptor kinase BRI1-like","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine Rich repeats (2 copies);; Leucine rich repeat;; Leucine Rich Repeat","Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 OS=Arabidopsis thaliana OX=3702 GN=SOBIR1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00188 PE=4 SV=1","T","Signal transduction mechanisms","leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c85090.graph_c0",4,1.1,0,0,1,0.28,16,4.52,28,9.08,28,7.82,2.76e-05,2.951379566,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K22425|2.0e-23|oeu:111404214|K22425 oleuropein beta-glucosidase [EC:3.2.1.206] | (RefSeq) beta-glucosidase","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolase family 1","Oleuropein beta-glucosidase OS=Olea europaea OX=4146 GN=GLU PE=1 SV=1","Beta-glucosidase OS=Olea europaea OX=4146 GN=bglc PE=2 SV=1","G","Carbohydrate transport and metabolism","beta-glucosidase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c83853.graph_c0",1,0.1,1,0.1,0,0,26,2.68,28,3.31,37,3.8,5.36e-08,4.045731494,"up","--","--","Cellular Component: cell wall (GO:0005618);; Molecular Function: manganese ion binding (GO:0030145);; Molecular Function: nutrient reservoir activity (GO:0045735);; Cellular Component: apoplast (GO:0048046);; ","--","--","--","Cupin;; Cupin domain","Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP7 PE=2 SV=2","Germin-like protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_044294 PE=3 SV=1","S","Function unknown","germin-like protein subfamily 1 member 1 [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: nutrient reservoir activity (GO:0045735);; cellular component: extracellular region (GO:0005576)","--"]
["c112828.graph_c0",117,7.09,88,4.92,89,5.2,369,13.46,392,15.92,461,16.57,6.05e-27,1.718989741,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13430|9.9e-82|nau:109243754|K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies);; Leucine Rich repeat","Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1","Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_017670 PE=4 SV=1","T","Signal transduction mechanisms","protein STRUBBELIG-RECEPTOR FAMILY 8-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant-pathogen interaction (ko04626)"]
["c97641.graph_c0",3,0.08,1,0.02,1,0.03,27,0.72,24,0.74,27,0.72,4.75e-06,3.093514098,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K15333|3.9e-85|nsy:104224633|K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) uncharacterized protein LOC104224633","--","--","Subtilase family;; Fibronectin type-III domain;; Peptidase inhibitor I9;; PA domain","Subtilisin-like protease OS=Petunia hybrida OX=4102 GN=SBT PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a023117mg PE=3 SV=1","G","Carbohydrate transport and metabolism","subtilisin-like protease SBT1.7 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c96602.graph_c0",76,3.38,23,0.97,33,1.51,20,1.41,14,0.73,15,0.68,0.00025423,-1.658366634,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06064 PE=4 SV=1","--","--","uncharacterized protein LOC111366851 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c80195.graph_c0",40,3.07,62,4.49,47,3.71,25,1.96,25,2.25,37,2.89,0.002001248,-1.067530059,"down","--","--","Molecular Function: endopeptidase inhibitor activity (GO:0004866);; ","--","--","--","Trypsin and protease inhibitor","Kunitz trypsin inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=KTI5 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15729 PE=3 SV=1","S","Function unknown","kunitz trypsin inhibitor 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c95528.graph_c0",9,0.42,1,0.04,5,0.24,219,10.39,142,7.77,224,10.56,1.95e-32,4.712571998,"up","--","--","--","--","--","--","Protein of unknown function (DUF1685)","--","Pectinacetylesterase family protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00014370pilonHSYRG00001 PE=4 SV=1","--","--","uncharacterized protein LOC111374327 [Olea europaea var. sylvestris]","--","--"]
["c108216.graph_c1",36,1.66,65,3.14,59,2.98,149,7.49,151,8.67,169,8.25,3.05e-07,1.2107848,"up","--","--","Molecular Function: AT DNA binding (GO:0003680);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","Plants and Prokaryotes Conserved (PCC) domain","AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1","AT-hook motif nuclear-localized protein OS=Salvia splendens OX=180675 GN=Saspl_023984 PE=4 SV=1","K","Transcription","AT-hook motif nuclear-localized protein 9-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c106467.graph_c1",2,0.08,10,0.5,9,0.44,49,3.42,24,1.78,69,5.21,1.28e-05,2.230394208,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; SAM domain (Sterile alpha motif);; Leucine rich repeat;; Leucine Rich Repeat;; Leucine Rich repeats (2 copies)","--","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00013750001 PE=4 SV=1","T","Signal transduction mechanisms","probable leucine-rich repeat receptor-like protein kinase At1g35710 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111996.graph_c0",612,100.67,744,119.33,662,116.56,221,48.13,232,47.3,261,48.08,1.56e-58,-1.814665391,"down","--","--","Biological Process: phosphorelay signal transduction system (GO:0000160);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: cellular process (GO:0009987);; Biological Process: circumnutation (GO:0010031);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: RNA biosynthetic process (GO:0032774);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: rhythmic process (GO:0048511);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: multicellular organismal movement (GO:0050879);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: nucleic acid-templated transcription (GO:0097659);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K12127|2.1e-06|psom:113275899|K12127 pseudo-response regulator 1 | (RefSeq) two-component response regulator-like PRR1","--","--","--","--","Response regulatory domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00228 PE=4 SV=1","K","Transcription","two-component response regulator-like APRR1 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: rhythmic process (GO:0048511);; biological process: multicellular organismal process (GO:0032501)","Circadian rhythm - plant (ko04712)"]
["c109745.graph_c0",23944,1199.28,27674,1309.93,25501,1314.65,16412,840.67,13465,790,15451,787.38,3.34e-80,-1.089707413,"down","[R]","General function prediction only ","--","K04708|7.4e-09|mtr:MTR_6g009130|K04708 3-dehydrosphinganine reductase [EC:1.1.1.102] | (RefSeq) transmembrane protein, putative","[R]","General function prediction only ","NAD(P)H-binding;; NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family","Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1","Putative oxidoreductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16776 PE=4 SV=1","--","--","uncharacterized protein At1g32220, chloroplastic [Olea europaea var. sylvestris]","--","Sphingolipid metabolism (ko00600)"]
["c116609.graph_c0",6,0.72,12,0.46,2,0.25,46,1.05,69,2.34,68,2.62,4.94e-09,2.710440095,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","--","[J]","Translation, ribosomal structure and biogenesis ","Pumilio-family RNA binding repeat","Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APUM7 PE=3 SV=2","Pumilio7, chloroplastic OS=Dorcoceras hygrometricum OX=472368 GN=F511_14891 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","putative pumilio homolog 10 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c105362.graph_c0",11976,687.39,12431,678.33,11545,681.57,4974,300.08,3684,254.57,4395,265.93,6.2e-164,-1.785078733,"down","[T]","Signal transduction mechanisms ","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: metal ion binding (GO:0046872);; ","K22390|9.6e-189|oeu:111404089|K22390 acid phosphatase type 7 | (RefSeq) purple acid phosphatase 22-like","[G]","Carbohydrate transport and metabolism ","Calcineurin-like phosphoesterase;; Purple acid Phosphatase, N-terminal domain","Purple acid phosphatase 22 OS=Arabidopsis thaliana OX=3702 GN=PAP22 PE=2 SV=1","Purple acid phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22055 PE=3 SV=1","G","Carbohydrate transport and metabolism","purple acid phosphatase 22-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c96617.graph_c0",3,0.08,0,0,0,0,17,0.85,22,0.7,42,1.49,1.87e-06,3.533438523,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|2.9e-122|oeu:111370841|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor-like protein kinase HSL1","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Protein kinase domain;; Leucine rich repeat N-terminal domain;; Protein tyrosine and serine/threonine kinase;; Leucine Rich repeat","Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23685 PE=3 SV=1","T","Signal transduction mechanisms","receptor-like protein kinase HSL1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101317.graph_c1",65,8.89,69,5.89,54,5.78,24,2.02,8,0.81,12,1.14,4.64e-10,-2.326492037,"down","--","--","Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; ","--","--","--","--","--","F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11307 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111371468 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108482.graph_c0",3,0.07,2,0.05,0,0,56,1.54,61,2.07,70,1.95,2.31e-13,4.326270526,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_005723 PE=4 SV=1","--","--","uncharacterized protein LOC111394795 isoform X2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c82423.graph_c0",97,31.89,62,18.92,73,24.18,47,15.86,38,14.74,30,10.01,1.64e-05,-1.300442493,"down","--","--","Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","K07513|4.6e-08|oeu:111392597|K07513 acetyl-CoA acyltransferase 1 [EC:2.3.1.16] | (RefSeq) 3-ketoacyl-CoA thiolase 2, peroxisomal","--","--","--","--","Acetyl-CoA acyltransferase 1 OS=Salvia splendens OX=180675 GN=ACAA1 PE=3 SV=1","--","--","acetyl-CoA acyltransferase 1 [Salvia splendens]","molecular function: catalytic activity (GO:0003824)","Fatty acid degradation (ko00071);; Valine, leucine and isoleucine degradation (ko00280);; alpha-Linolenic acid metabolism (ko00592);; Biosynthesis of unsaturated fatty acids (ko01040);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)"]
["c108866.graph_c0",16,1.12,7,0.51,15,1.05,56,4.23,55,4.91,72,4.99,2.67e-06,1.851733507,"up","--","--","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: biological_process (GO:0008150);; Biological Process: response to wounding (GO:0009611);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to ozone (GO:0010193);; Cellular Component: membrane (GO:0016020);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to drug (GO:0042493);; Molecular Function: ion binding (GO:0043167);; Molecular Function: cation binding (GO:0043169);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to antibiotic (GO:0046677);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K13448|1.4e-60|oeu:111372554|K13448 calcium-binding protein CML | (RefSeq) calcium-binding protein CML38-like","[T]","Signal transduction mechanisms ","EF-hand domain pair;; EF-hand domain pair;; EF hand;; EF-hand domain;; EF hand;; Cytoskeletal-regulatory complex EF hand","Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_036191 PE=4 SV=1","T","Signal transduction mechanisms","calcium-binding protein CML38-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020)","Plant-pathogen interaction (ko04626)"]
["c74486.graph_c0",266,35.11,351,44.14,282,38.56,164,21.13,128,18.55,148,18.67,2.14e-18,-1.343755687,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117554.graph_c0",228,27.07,258,28.15,216,26.44,737,96.25,563,85.58,668,86.85,1.02e-22,1.159272005,"up","[IQ]","--","Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity (GO:0004315);; Biological Process: fatty acid biosynthetic process (GO:0006633);; ","K09458|8.2e-90|oeu:111386576|K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] | (RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like","[IQ]","--","Beta-ketoacyl synthase, N-terminal domain","3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS1 PE=1 SV=2","Beta-ketoacyl-[acyl-carrier-protein] synthase I OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03830 PE=3 SV=1","H","Coenzyme transport and metabolism","3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c106295.graph_c0",61,1.96,69,2.1,54,1.79,18,0.59,12,0.45,14,0.46,8.2e-11,-2.302293769,"down","--","--","Molecular Function: ATP transmembrane transporter activity (GO:0005347);; Cellular Component: integral component of membrane (GO:0016021);; ","K15121|2.5e-170|oeu:111397583|K15121 solute carrier family 25, member 44 | (RefSeq) solute carrier family 25 member 44-like","[C]","Energy production and conversion ","Mitochondrial carrier protein","ADP,ATP carrier protein ER-ANT1 OS=Arabidopsis thaliana OX=3702 GN=ER-ANT1 PE=2 SV=2","Putative mitochondrial carrier protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03305 PE=3 SV=1","C","Energy production and conversion","solute carrier family 25 member 44-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98580.graph_c0",3,0.17,0,0,0,0,47,2.24,76,3.62,57,2.48,7.93e-13,4.696410293,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","--","--","--","Double-stranded RNA binding motif","Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_038619 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","double-stranded RNA-binding protein 3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c113309.graph_c0",2527,114.88,2394,103.73,2317,109.01,1465,60.42,1214,58.21,1424,58.02,3.37e-66,-1.142550719,"down","--","--","Molecular Function: acid phosphatase activity (GO:0003993);; Molecular Function: metal ion binding (GO:0046872);; ","K22390|2.0e-126|oeu:111388085|K22390 acid phosphatase type 7 | (RefSeq) purple acid phosphatase 2-like isoform X1","[G]","Carbohydrate transport and metabolism ","Purple acid Phosphatase, N-terminal domain;; Calcineurin-like phosphoesterase;; Iron/zinc purple acid phosphatase-like protein C","Purple acid phosphatase OS=Glycine max OX=3847 GN=PAP PE=1 SV=2","Purple acid phosphatase OS=Nyssa sinensis OX=561372 GN=F0562_020536 PE=3 SV=1","G","Carbohydrate transport and metabolism","purple acid phosphatase 2-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c109875.graph_c0",9,0.24,5,0.16,9,0.25,48,1.49,72,2.72,101,3.32,1.27e-10,2.775124698,"up","--","--","--","--","--","--","Remorin, C-terminal region","--","Remorin_C domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01133 PE=3 SV=1","S","Function unknown","uncharacterized protein At3g61260 [Olea europaea var. sylvestris]","--","--"]
["c101205.graph_c1",8,0.64,4,0.3,10,0.87,93,8.05,111,10.93,96,8.25,5.11e-17,3.295060808,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|2.7e-95|sind:105166984|K20628 expansin | (RefSeq) expansin-A2","--","--","Expansin C-terminal domain;; Lytic transglycolase","Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1","Expansin OS=Osmanthus fragrans OX=93977 PE=2 SV=1","S","Function unknown","EXPA3 [Osmanthus fragrans]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c95440.graph_c0",116,6.93,156,8.71,130,8.19,82,5.13,51,3.57,63,4.43,3.28e-09,-1.34162373,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: vesicle-mediated transport (GO:0016192);; ","K08486|1.1e-89|hbr:110632164|K08486 syntaxin 1B/2/3 | (RefSeq) syntaxin-132-like isoform X1","[U]","Intracellular trafficking, secretion, and vesicular transport ","Syntaxin;; SNARE domain;; Syntaxin","Syntaxin-132 OS=Arabidopsis thaliana OX=3702 GN=SYP132 PE=1 SV=1","t-SNARE coiled-coil homology domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_030218 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","syntaxin-132-like isoform X1 [Hevea brasiliensis]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","SNARE interactions in vesicular transport (ko04130)"]
["c108382.graph_c1",9,0.47,4,0.2,5,0.27,32,1.63,21,1.21,23,1.16,0.004744986,1.598285521,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);; ","K18932|8.6e-16|brp:103854281|K18932 palmitoyltransferase [EC:2.3.1.225] | (RefSeq) probable protein S-acyltransferase 7","[R]","General function prediction only ","--","Probable protein S-acyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=PAT04 PE=2 SV=1","S-acyltransferase OS=Davidia involucrata OX=16924 GN=Din_021652 PE=3 SV=1","S","Function unknown","probable protein S-acyltransferase 4 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c102961.graph_c2",76,6.71,86,7.16,91,8.25,52,4.7,49,5.07,52,4.67,6.08e-05,-1.031647563,"down","--","--","--","K13192|1.9e-58|dzi:111300937|K13192 RNA-binding protein 26 | (RefSeq) zinc finger CCCH domain-containing protein 41-like","--","--","UBA-like domain (DUF1421)","--","DUF1421 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_009786 PE=4 SV=1","S","Function unknown","transcriptional regulator DEF1-like isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c113906.graph_c2",30,0.86,13,0.35,7,0.21,97,2.83,117,3.91,88,2.56,2.22e-09,2.203024838,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09873|1.8e-121|vvi:100233003|K09873 aquaporin TIP | (RefSeq) TIP1;1, TIP1, aquaporin; aquaporin-like","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Aquaporin TIP1-3 OS=Arabidopsis thaliana OX=3702 GN=TIP1-3 PE=1 SV=1","Putative vacuolar aluminum transporter OS=Davidia involucrata OX=16924 GN=Din_032779 PE=3 SV=1","G","Carbohydrate transport and metabolism","putative aquaporin TIP3 [Vitis cinerea var. helleri x Vitis rupestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116763.graph_c0",85,1.81,100,2.02,68,1.49,36,0.78,28,0.69,51,1.1,3.9e-07,-1.433538518,"down","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: immune system process (GO:0002376);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: calmodulin binding (GO:0005516);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: protein folding (GO:0006457);; Biological Process: autophagy (GO:0006914);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: immune response (GO:0006955);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to heat (GO:0009408);; Biological Process: response to light stimulus (GO:0009416);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to fungus (GO:0009620);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: response to light intensity (GO:0009642);; Biological Process: response to high light intensity (GO:0009644);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: defense response, incompatible interaction (GO:0009814);; Biological Process: defense response to fungus, incompatible interaction (GO:0009817);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: regulation of catabolic process (GO:0009894);; Biological Process: positive regulation of catabolic process (GO:0009896);; Biological Process: cellular process (GO:0009987);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: regulation of autophagy (GO:0010506);; Biological Process: positive regulation of autophagy (GO:0010508);; Biological Process: regulation of cell death (GO:0010941);; Biological Process: positive regulation of cell death (GO:0010942);; Biological Process: induction of programmed cell death (GO:0012502);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Cellular Component: cell junction (GO:0030054);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular catabolic process (GO:0031329);; Biological Process: positive regulation of cellular catabolic process (GO:0031331);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to drug (GO:0042493);; Biological Process: response to hydrogen peroxide (GO:0042542);; Biological Process: regulation of programmed cell death (GO:0043067);; Biological Process: positive regulation of programmed cell death (GO:0043068);; Biological Process: response to external biotic stimulus (GO:0043207);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: innate immune response (GO:0045087);; Biological Process: response to antibiotic (GO:0046677);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Molecular Function: chaperone binding (GO:0051087);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Cellular Component: symplast (GO:0055044);; Biological Process: reproductive system development (GO:0061458);; Biological Process: process utilizing autophagic mechanism (GO:0061919);; Biological Process: biological regulation (GO:0065007);; Biological Process: defense response to other organism (GO:0098542);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","BAG domain","BAG family molecular chaperone regulator 6 OS=Arabidopsis thaliana OX=3702 GN=BAG6 PE=1 SV=1","BAG domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22162 PE=4 SV=1","S","Function unknown","LOW QUALITY PROTEIN: BAG family molecular chaperone regulator 6 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: response to stimulus (GO:0050896);; biological process: immune system process (GO:0002376);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; cellular component: symplast (GO:0055044);; biological process: multi-organism process (GO:0051704);; biological process: biological regulation (GO:0065007)","--"]
["c109133.graph_c0",2,0.11,3,0.16,3,0.16,19,1.04,35,2.21,39,2.16,4.31e-06,2.838967783,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c85769.graph_c1",4,0.26,1,0.06,0,0,47,3.14,40,3.18,42,2.8,1.25e-09,3.798284083,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity (GO:0008760);; Biological Process: UDP-N-acetylgalactosamine biosynthetic process (GO:0019277);; ","K00790|1.6e-49|soe:110781239|K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] | (RefSeq) uncharacterized protein LOC110781239","--","--","EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)","--","EPSP_synthase domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_038712 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","hypothetical protein F0562_009007 [Nyssa sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c107926.graph_c2",13,0.42,39,1.18,15,0.5,111,3.65,86,3.24,111,3.63,5.01e-08,1.827467954,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A10g048802 PE=4 SV=1","--","--","uncharacterized protein LOC111367751 [Olea europaea var. sylvestris]","--","--"]
["c84963.graph_c1",33,6.76,34,6.63,41,8.56,87,18.26,107,25.77,134,28.01,6.65e-06,1.248341917,"up","[C]","Energy production and conversion ","Molecular Function: malate dehydrogenase (decarboxylating) (NAD+) activity (GO:0004471);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NAD binding (GO:0051287);; ","K00029|1.2e-88|oeu:111367827|K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] | (RefSeq) NADP-dependent malic enzyme, chloroplastic-like","[C]","Energy production and conversion ","Malic enzyme, N-terminal domain","NADP-dependent malic enzyme OS=Populus trichocarpa OX=3694 PE=2 SV=3","Malic enzyme OS=Striga asiatica OX=4170 GN=STAS_29540 PE=3 SV=1","C","Energy production and conversion","NADP-dependent malic enzyme, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c115348.graph_c0",0,0,0,0,0,0,21,1.9,24,2.91,18,2.24,5.35e-07,4.387327638,"up","--","--","--","K05387|6.8e-30|pxb:103932890|K05387 glutamate receptor, ionotropic, plant | (RefSeq) glutamate receptor 3.2-like","[R]","General function prediction only ","Retrotransposon gag protein","--","uncharacterized protein LOC109017803 OS=Juglans regia OX=51240 GN=LOC109017803 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein F2P56_035658, partial [Juglans regia]","--","--"]
["c88186.graph_c0",56,13.91,37,8.58,40,10.11,17,4.33,16,4.68,22,5.55,5.42e-05,-1.539755297,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: tRNA aminoacylation for protein translation (GO:0006418);; ","K01876|2.5e-72|oeu:111378107|K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] | (RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial-like","[J]","Translation, ribosomal structure and biogenesis ","GAD domain","Aspartate--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g33760 PE=2 SV=1","AA_TRNA_LIGASE_II domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004713 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","aspartate--tRNA ligase, chloroplastic/mitochondrial-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c99464.graph_c1",46,11.56,40,8.03,29,4.2,229,18,192,19.81,211,20.45,2.16e-21,2.108939226,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c93325.graph_c0",4,0.28,7,0.46,0,0,21,1.5,37,3.02,47,3.33,1.03e-05,2.632218968,"up","[T]","Signal transduction mechanisms ","Molecular Function: solute:proton antiporter activity (GO:0015299);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[P]","Inorganic ion transport and metabolism ","Universal stress protein family","Cation/H(+) antiporter 20 OS=Arabidopsis thaliana OX=3702 GN=CHX20 PE=2 SV=1","Cation/H+ exchanger OS=Corchorus capsularis OX=210143 GN=CCACVL1_21262 PE=4 SV=1","P","Inorganic ion transport and metabolism","cation/H(+) antiporter 20-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109259.graph_c1",16,0.48,18,0.51,15,0.47,75,2.53,122,4.83,130,4.46,2.1e-12,2.345514656,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","--","--","--","--","--","MFS domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr013096 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","protein ZINC INDUCED FACILITATOR-LIKE 1-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c105485.graph_c0",343,11.55,374,11.9,293,10.18,816,28.06,864,34.01,971,33.25,5.98e-25,1.069232209,"up","[R]","General function prediction only ","--","--","[MW]","--","Fasciclin domain","Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=FLA17 PE=2 SV=1","Fasciclin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18999 PE=3 SV=1","--","--","fasciclin-like arabinogalactan protein 16 [Olea europaea var. sylvestris]","--","--"]
["c107383.graph_c0",5060,208.05,5663,222.39,5324,226.3,3379,166.46,2713,154.4,3321,159.34,1.55e-72,-1.094646516,"down","[C]","Energy production and conversion ","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: isocitrate dehydrogenase (NADP+) activity (GO:0004450);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: isocitrate metabolic process (GO:0006102);; Biological Process: NADP metabolic process (GO:0006739);; Molecular Function: NAD binding (GO:0051287);; ","K00031|1.4e-223|sind:105168086|K00031 isocitrate dehydrogenase [EC:1.1.1.42] | (RefSeq) isocitrate dehydrogenase [NADP] isoform X1","[C]","Energy production and conversion ","Isocitrate/isopropylmalate dehydrogenase","Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Isocitrate dehydrogenase [NADP] OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a007171mg PE=3 SV=1","C","Energy production and conversion","isocitrate dehydrogenase [NADP] isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","Citrate cycle (TCA cycle) (ko00020);; Glutathione metabolism (ko00480);; Carbon metabolism (ko01200);; 2-Oxocarboxylic acid metabolism (ko01210);; Biosynthesis of amino acids (ko01230);; Peroxisome (ko04146)"]
["c109054.graph_c1",2923,138.94,3082,145.46,2930,145.88,924,41.87,745,40.82,866,38.1,6.13e-222,-2.139433476,"down","[E]","Amino acid transport and metabolism ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Biological Process: integrin-mediated signaling pathway (GO:0007229);; ","K06272|3.0e-25|vvi:100852545|K06272 integrin-linked kinase [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase TNNI3K","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat","Integrin-linked protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=ILK1 PE=1 SV=1","integrin-linked protein kinase homolog pat-4-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107782930 PE=4 SV=1","T","Signal transduction mechanisms","PREDICTED: integrin-linked protein kinase-like isoform X2 [Nicotiana sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c87112.graph_c0",44,6.5,54,7.49,26,3.93,219,33.14,199,34.56,205,30.78,2.93e-18,1.986165285,"up","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA helicase activity (GO:0003724);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: chloroplast (GO:0009507);; ","--","[A]","RNA processing and modification ","--","DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 PE=1 SV=2","DEAD-box ATP-dependent RNA helicase 31-like OS=Nicotiana tabacum OX=4097 GN=LOC107760327 PE=4 SV=1","A","RNA processing and modification","DEAD-box ATP-dependent RNA helicase 26-like, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c110034.graph_c1",93,4.55,117,5.12,124,5.13,78,4.36,59,3.8,57,2.6,6.05e-06,-1.090370547,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107627.graph_c1",20013,841.3,21197,842.52,19551,846.18,13053,560.83,11192,550.76,12455,532.55,5.43e-109,-1.049480637,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity (GO:0004801);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: pentose-phosphate shunt (GO:0006098);; ","K00616|1.1e-106|oeu:111406210|K00616 transaldolase [EC:2.2.1.2] | (RefSeq) uncharacterized protein LOC111406210","[G]","Carbohydrate transport and metabolism ","Transaldolase/Fructose-6-phosphate aldolase","Transaldolase (Fragments) OS=Capsicum annuum var. annuum OX=40321 PE=1 SV=1","Transaldolase OS=Jatropha curcas OX=180498 GN=JCGZ_23088 PE=3 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111406210 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Pentose phosphate pathway (ko00030);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c109375.graph_c1",8,0.23,6,0.17,5,0.14,133,4.22,133,4.76,184,5.75,5.88e-27,4.059371415,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20718|2.9e-19|lsv:111893200|K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERECTA","--","--","Leucine rich repeat;; Protein tyrosine and serine/threonine kinase;; Leucine Rich repeats (2 copies);; Protein kinase domain;; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat;; Protein tyrosine and serine/threonine kinase","Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01484 PE=4 SV=1","T","Signal transduction mechanisms","BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016)"]
["c110104.graph_c4",59,4.16,80,5.36,68,4.93,19,1.38,18,1.5,24,1.71,3.71e-10,-2.027219765,"down","--","--","--","K00224|7.0e-07|oeu:111379717|K00224 chloroplastic oxoene reductase [EC:1.3.1.-] | (RefSeq) chloroplast envelope quinone oxidoreductase homolog","--","--","--","--","--","--","--","--","--","alpha-Linolenic acid metabolism (ko00592)"]
["c93085.graph_c0",69,4.74,60,3.9,55,3.94,230,16.17,211,16.85,212,14.9,3.65e-14,1.491716447,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_003973 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111406249 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c95001.graph_c1",26,2.91,21,1.83,7,0.94,291,31.33,275,34.68,295,31.54,7.99e-45,3.609082054,"up","--","--","Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; ","--","--","--","Ubiquitin-binding WIYLD domain","--","WIYLD domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_047982 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111403085 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c116606.graph_c0",308,7.38,344,8.07,310,8.12,1033,26.72,1008,30.77,1164,32.4,1.03e-51,1.409864194,"up","--","--","--","K02433|1.0e-49|apro:F751_6020|K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] | (RefSeq) Glutamyl-tRNA(Gln) amidotransferase subunit A","[I]","Lipid transport and metabolism ","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana OX=3702 GN=SFH9 PE=2 SV=1","Phosphatidylinositol transfer protein SEC14 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19207 PE=4 SV=1","I","Lipid transport and metabolism","phosphatidylinositol/phosphatidylcholine transfer protein SFH9-like isoform X3 [Olea europaea var. sylvestris]","--","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c101066.graph_c0",518,26.8,620,30.49,537,28.95,1619,95.16,1216,82.75,1395,81.03,1.23e-25,1.010739516,"up","--","--","Molecular Function: kinase activity (GO:0016301);; ","K07052|1.9e-10|ini:109194101|K07052 uncharacterized protein | (RefSeq) uncharacterized LOC109194101","--","--","--","Probable membrane-associated kinase regulator 6 OS=Arabidopsis thaliana OX=3702 GN=MAKR6 PE=2 SV=1","Putative membrane-associated kinase regulator 6 OS=Dorcoceras hygrometricum OX=472368 GN=F511_05556 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111391892 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c60572.graph_c0",246,30.84,280,33.02,268,34.43,3,0.39,2,0.29,3,0.38,2.21e-48,-6.498333532,"down","--","--","Cellular Component: chromosome, centromeric region (GO:0000775);; Cellular Component: kinetochore (GO:0000776);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: chromosome (GO:0005694);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: centrosome (GO:0005813);; Cellular Component: microtubule organizing center (GO:0005815);; Cellular Component: cytoskeleton (GO:0005856);; Cellular Component: microtubule (GO:0005874);; Cellular Component: microtubule associated complex (GO:0005875);; Cellular Component: cell cortex (GO:0005938);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: cytoskeletal protein binding (GO:0008092);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Molecular Function: tubulin binding (GO:0015631);; Molecular Function: Ras GTPase binding (GO:0017016);; Molecular Function: Rho GTPase binding (GO:0017048);; Molecular Function: enzyme binding (GO:0019899);; Biological Process: second-messenger-mediated signaling (GO:0019932);; Biological Process: cAMP-mediated signaling (GO:0019933);; Biological Process: cyclic-nucleotide-mediated signaling (GO:0019935);; Biological Process: signaling (GO:0023052);; Molecular Function: small GTPase binding (GO:0031267);; Cellular Component: centrosomal corona (GO:0031592);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: protein localization to organelle (GO:0033365);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: intracellular signal transduction (GO:0035556);; Cellular Component: organelle (GO:0043226);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: protein localization to cytoskeleton (GO:0044380);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chromosomal part (GO:0044427);; Cellular Component: obsolete cytoskeletal part (GO:0044430);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete microtubule organizing center part (GO:0044450);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: protein-containing complex binding (GO:0044877);; Molecular Function: dynein heavy chain binding (GO:0045504);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Molecular Function: GTPase binding (GO:0051020);; Biological Process: localization (GO:0051179);; Biological Process: organelle localization (GO:0051640);; Biological Process: cellular localization (GO:0051641);; Biological Process: centrosome localization (GO:0051642);; Biological Process: Golgi localization (GO:0051645);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: microtubule organizing center localization (GO:0061842);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular macromolecule localization (GO:0070727);; Molecular Function: dynein complex binding (GO:0070840);; Biological Process: protein localization to centrosome (GO:0071539);; Cellular Component: cell periphery (GO:0071944);; Biological Process: protein localization to microtubule cytoskeleton (GO:0072698);; Cellular Component: chromosomal region (GO:0098687);; Cellular Component: supramolecular complex (GO:0099080);; Cellular Component: supramolecular polymer (GO:0099081);; Cellular Component: supramolecular fiber (GO:0099512);; Cellular Component: polymeric cytoskeletal fiber (GO:0099513);; Cellular Component: cytoplasmic region (GO:0099568);; Biological Process: protein localization to microtubule organizing center (GO:1905508);; ","K14963|3.1e-61|gmx:100814685|K14963 COMPASS component SWD3 | (RefSeq) protein JINGUBANG-like","[R]","General function prediction only ","--","Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1","nuclear distribution protein PAC1-2-like OS=Nicotiana tabacum OX=4097 GN=LOC107767071 PE=4 SV=1","S","Function unknown","protein JINGUBANG-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; molecular function: binding (GO:0005488);; cellular component: supramolecular complex (GO:0099080);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: localization (GO:0051179)","--"]
["c112685.graph_c0",1760,38.06,1889,39.08,1771,38.58,462,14.79,472,17.07,499,15.52,5.54e-187,-2.237467617,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","--","[R]","General function prediction only ","Major Facilitator Superfamily","--","Putative transporter ADD1 (Major facilitator superfamily) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02755 PE=3 SV=1","S","Function unknown","hippocampus abundant transcript-like protein 1 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c102900.graph_c0",761,76.08,696,65.31,607,62.24,4431,451.53,4407,515.07,4789,483.89,6.43e-255,2.399291734,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00468 PE=3 SV=1","S","Function unknown","pollen allergen Che a 1-like [Olea europaea var. sylvestris]","--","--"]
["c106829.graph_c0",32,1.02,22,0.69,16,0.53,63,2.16,83,3.2,96,3.1,2.05e-05,1.426098714,"up","--","--","--","--","--","--","VQ motif","--","VQ domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_000352 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111390376 [Olea europaea var. sylvestris]","--","--"]
["c117462.graph_c0",853,16.12,860,14.99,827,15.88,206,2.82,197,3.02,232,3.1,4.43e-114,-2.317663566,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K10268|5.5e-27|aof:109825399|K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 20-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca013638 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111409515 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c105484.graph_c0",51,1.52,49,1.42,43,1.66,423,25.19,420,27.68,419,25.09,3.12e-56,2.798031746,"up","[T]","Signal transduction mechanisms ","Molecular Function: phosphoprotein phosphatase activity (GO:0004721);; Molecular Function: hydrolase activity (GO:0016787);; ","--","[TR]","--","Calcineurin-like phosphoesterase","Tyrosine-protein phosphatase RLPH2 OS=Arabidopsis thaliana OX=3702 GN=RLPH2 PE=1 SV=1","Serine/threonine specific protein phosphatase PP1, catalytic subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27360 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111378131 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c109307.graph_c0",161,5.6,171,5.66,140,5.06,60,2.13,64,2.61,68,2.39,3.08e-15,-1.599239257,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109287.graph_c0",210,9.98,139,6.11,124,6.14,84,3.9,49,3.88,77,5.17,6e-10,-1.4778695,"down","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10406|2.9e-228|oeu:111391234|K10406 kinesin family member C2/C3 | (RefSeq) kinesin-like protein KIN-14C isoform X1","[Z]","Cytoskeleton ","Kinesin motor domain;; Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-14J OS=Arabidopsis thaliana OX=3702 GN=KIN14J PE=1 SV=1","Putative kinesin-4-like isoform X1 OS=Davidia involucrata OX=16924 GN=Din_019061 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-14K isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c108389.graph_c0",3,0.11,1,0.03,0,0,18,0.7,22,0.93,25,0.92,2.96e-05,3.037570714,"up","[G]","Carbohydrate transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K24193|4.6e-211|ccav:112521741|K24193 MFS transporter, SP family, sugar:H+ symporter | (RefSeq) sugar carrier protein C-like","[R]","General function prediction only ","Sugar (and other) transporter;; Major Facilitator Superfamily;; Fungal trichothecene efflux pump (TRI12);; Ion channel regulatory protein UNC-93","Sugar carrier protein C OS=Ricinus communis OX=3988 GN=STC PE=2 SV=1","General substrate transporter OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_007930 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","sugar carrier protein C-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c105724.graph_c0",4,0.8,2,0.17,1,0.13,46,5.06,33,4.05,65,7.94,7.42e-10,3.590012262,"up","--","--","Molecular Function: NAD+ kinase activity (GO:0003951);; Molecular Function: diacylglycerol kinase activity (GO:0004143);; Molecular Function: ATP binding (GO:0005524);; Biological Process: protein kinase C-activating G protein-coupled receptor signaling pathway (GO:0007205);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: intracellular signal transduction (GO:0035556);; ","--","[S]","Function unknown ","--","Protein RETARDED ROOT GROWTH-LIKE OS=Arabidopsis thaliana OX=3702 GN=RRL PE=2 SV=1","Diacylglycerol kinase OS=Striga asiatica OX=4170 GN=STAS_15128 PE=3 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111376355, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109033.graph_c3",26,2.68,36,3.49,36,3.8,5,0.53,2,0.24,2,0.21,2.25e-09,-3.394019842,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99795.graph_c0",28,1.12,25,0.94,20,0.81,1,0.04,1,0.05,1,0.04,1.1e-08,-4.025890427,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c89976.graph_c0",9,0.77,6,0.48,2,0.18,21,1.84,27,2.7,32,2.78,0.002259219,1.744325528,"up","--","--","Biological Process: endomembrane system organization (GO:0010256);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein of unknown function (DUF679)","Protein DMP4 OS=Arabidopsis thaliana OX=3702 GN=DMP4 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a023255mg PE=3 SV=1","S","Function unknown","protein DMP10-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c115543.graph_c0",292,9.45,273,7.97,217,7.74,122,4.32,124,4.13,140,5.47,1.22e-16,-1.329358391,"down","--","--","Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Biological Process: DNA replication (GO:0006260);; Biological Process: DNA repair (GO:0006281);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: epsilon DNA polymerase complex (GO:0008622);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K02324|8.2e-92|oeu:111383059|K02324 DNA polymerase epsilon subunit 1 [EC:2.7.7.7] | (RefSeq) DNA polymerase epsilon catalytic subunit A-like","[L]","Replication, recombination and repair ","DNA polymerase family B, exonuclease domain;; DNA polymerase family B, exonuclease domain","DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1","DNA polymerase epsilon catalytic subunit OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30068 PE=3 SV=1","L","Replication, recombination and repair","DNA polymerase epsilon catalytic subunit A-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","DNA replication (ko03030);; Base excision repair (ko03410);; Nucleotide excision repair (ko03420)"]
["c117801.graph_c0",63,0.85,64,0.82,45,0.63,29,0.4,26,0.41,29,0.4,4.56e-05,-1.31521847,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K15601|5.5e-101|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Putative RNA-directed DNA polymerase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0208691 PE=4 SV=1","L","Replication, recombination and repair","putative RNA-directed DNA polymerase [Medicago truncatula]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c87145.graph_c0",0,0,0,0,0,0,19,2.01,35,4.6,65,6.14,7.64e-10,5.121162655,"up","--","--","--","--","--","--","Domain of unknown function (DUF4378)","--","DUF4378 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13519 PE=4 SV=1","--","--","uncharacterized protein LOC111386835 [Olea europaea var. sylvestris]","--","--"]
["c105742.graph_c0",0,0,1,0.01,3,0.03,120,1.32,97,1.22,135,1.48,5.44e-21,5.395809566,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; ","K22804|1.1e-55|bna:106442438|K22804 structural maintenance of chromosomes protein 6 | (RefSeq) structural maintenance of chromosomes protein 6B-like","[R]","General function prediction only ","Reverse transcriptase-like;; zinc-binding in reverse transcriptase;; Reverse transcriptase (RNA-dependent DNA polymerase);; Domain of unknown function (DUF4283)","Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1","Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_036737 PE=4 SV=1","L","Replication, recombination and repair","Uncharacterized protein TCM_036737 [Theobroma cacao]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c103131.graph_c0",94,4.06,98,4.03,81,3.43,53,2.19,54,2.49,58,2.36,2.64e-05,-1.029979837,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","K07910|6.4e-12|oeu:111365290|K07910 Ras-related protein Rab-18 | (RefSeq) ras-related protein RABC1-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase","RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1","Endonuclease OS=Oryza sativa subsp. japonica OX=39947 GN=orf y PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC104648678 [Solanum lycopersicum]","molecular function: binding (GO:0005488)","--"]
["c91218.graph_c0",21,6.49,30,8.62,22,6.89,6,1.9,9,3.28,2,0.63,9.23e-05,-2.185010373,"down","--","--","Molecular Function: ligand-gated ion channel activity (GO:0015276);; Cellular Component: integral component of membrane (GO:0016021);; ","K05387|3.1e-26|pmum:103324849|K05387 glutamate receptor, ionotropic, plant | (RefSeq) glutamate receptor 2.7-like","[PET]","--","Receptor family ligand binding region","Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2","Glutamate receptor OS=Coffea canephora OX=49390 GN=GSCOC_T00013843001 PE=3 SV=1","--","--","glutamate receptor 2.7-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; molecular function: molecular transducer activity (GO:0060089);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116303.graph_c0",3860,111.4,3833,103.77,3595,108.06,11054,333.15,9882,339.29,11311,336.67,3.08e-148,1.190075018,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460);; Biological Process: UDP-rhamnose biosynthetic process (GO:0010253);; Molecular Function: UDP-L-rhamnose synthase activity (GO:0010280);; Biological Process: auxin efflux (GO:0010315);; Molecular Function: UDP-glucose 4,6-dehydratase activity (GO:0050377);; Biological Process: flavonol biosynthetic process (GO:0051555);; ","K12450|0.0e+00|oeu:111389260|K12450 UDP-glucose 4,6-dehydratase [EC:4.2.1.76] | (RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like isoform X1","[G]","Carbohydrate transport and metabolism ","GDP-mannose 4,6 dehydratase;; NAD dependent epimerase/dehydratase family;; RmlD substrate binding domain;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; Polysaccharide biosynthesis protein;; Male sterility protein","Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1","trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Nicotiana tabacum OX=4097 GN=LOC107828454 PE=4 SV=1","G","Carbohydrate transport and metabolism","trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c91495.graph_c0",73,3.91,54,2.73,51,3.41,14,6.09,13,1.12,19,4.21,1.12e-09,-2.197086494,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103641.graph_c0",118,17.36,152,20.91,141,21.11,4,0.65,4,0.68,19,3.32,2.67e-12,-3.885508496,"down","--","--","--","--","--","--","--","--","--","--","--","zinc finger BED domain-containing protein RICESLEEPER 4-like [Olea europaea var. sylvestris]","--","--"]
["c106681.graph_c1",9,0.33,3,0.11,3,0.11,23,0.87,29,1.3,40,1.51,0.000231393,2.080330399,"up","[F]","Nucleotide transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14611|5.8e-248|nau:109231653|K14611 solute carrier family 23 (nucleobase transporter), member 1 | (RefSeq) nucleobase-ascorbate transporter 6","[F]","Nucleotide transport and metabolism ","Permease family","Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana OX=3702 GN=NAT6 PE=2 SV=2","Putative Nucleobase-ascorbate transporter 7 OS=Davidia involucrata OX=16924 GN=Din_001061 PE=4 SV=1","F","Nucleotide transport and metabolism","nucleobase-ascorbate transporter 6-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c117017.graph_c0",33,3.85,22,5.87,28,3.76,158,18.67,146,12.02,151,14.42,5.06e-16,2.092394394,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: L-arabinose metabolic process (GO:0046373);; Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);; ","K13148|1.7e-77|egr:104453658|K13148 integrator complex subunit 11 [EC:3.1.27.-] | (RefSeq) cleavage and polyadenylation specificity factor subunit 3-II","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; RING-H2 zinc finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1","Non-reducing end alpha-L-arabinofuranosidase OS=Dorcoceras hygrometricum OX=472368 GN=F511_17068 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin protein ligase RIE1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c105590.graph_c1",22,1.65,20,1.42,29,2.23,0,0,2,0.18,1,0.08,2.21e-08,-3.978517292,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106407.graph_c2",4993,172.68,5156,167.41,5021,177.51,1717,59.51,1366,54.86,1680,58.44,4.89e-236,-1.995895839,"down","--","--","Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","K19747|1.2e-65|oeu:111402986|K19747 BAHD acyltransferase [EC:2.3.1.-] | (RefSeq) BAHD acyltransferase DCR-like","--","--","Transferase family","Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana OX=3702 GN=At3g50280 PE=3 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a027064mg PE=3 SV=1","S","Function unknown","PREDICTED: uncharacterized acetyltransferase At3g50280 [Erythranthe guttata]","molecular function: catalytic activity (GO:0003824)","--"]
["c111833.graph_c1",136,14.34,184,19.13,194,21.78,51,5.23,91,11.35,73,7.59,4.62e-11,-1.549467858,"down","--","--","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K05933|3.9e-125|oeu:111407173|K05933 aminocyclopropanecarboxylate oxidase [EC:1.14.17.4] | (RefSeq) 1-aminocyclopropane-1-carboxylate oxidase","[QR]","--","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa OX=3627 GN=ACO PE=2 SV=1","Fe2OG dioxygenase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014413 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","1-aminocyclopropane-1-carboxylate oxidase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Cysteine and methionine metabolism (ko00270)"]
["c118313.graph_c0",0,0,0,0,0,0,17,2.48,20,3.34,24,3.47,7.85e-07,4.337995208,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c90293.graph_c0",2,0.14,2,0.1,2,0.23,42,2.55,37,2.65,50,3.3,1.54e-09,3.620396578,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; ","K13436|8.3e-50|bna:106400645|K13436 pto-interacting protein 1 [EC:2.7.11.1] | (RefSeq) PTI1-like tyrosine-protein kinase 1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Proline-rich receptor-like protein kinase PERK8 OS=Arabidopsis thaliana OX=3702 GN=PERK8 PE=1 SV=1","serine/threonine-protein kinase CDL1-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107812404 PE=4 SV=1","T","Signal transduction mechanisms","PTI1-like tyrosine-protein kinase 1 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","Plant-pathogen interaction (ko04626)"]
["c113400.graph_c0",583,20.86,655,22.29,601,20.23,2002,65.35,1759,64.46,1998,65.75,3.78e-71,1.321713566,"up","[L]","Replication, recombination and repair ","Biological Process: base-excision repair (GO:0006284);; Molecular Function: DNA-3-methyladenine glycosylase activity (GO:0008725);; ","K01246|9.7e-138|oeu:111374093|K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] | (RefSeq) uncharacterized protein LOC111374093","--","--","Methyladenine glycosylase","--","Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G156500 PE=4 SV=2","F","Nucleotide transport and metabolism","uncharacterized protein LOC111374093 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: catalytic activity (GO:0003824)","Base excision repair (ko03410)"]
["c105706.graph_c0",105,6.16,108,7.01,105,7.62,367,24.38,382,28.56,413,25.29,7.4e-25,1.538177001,"up","[C]","Energy production and conversion ","Molecular Function: FMN binding (GO:0010181);; Molecular Function: 12-oxophytodienoate reductase activity (GO:0016629);; ","K05894|9.3e-102|sind:105179306|K05894 12-oxophytodienoic acid reductase [EC:1.3.1.42] | (RefSeq) putative 12-oxophytodienoate reductase 11","[CR]","--","NADH:flavin oxidoreductase / NADH oxidase family","12-oxophytodienoate reductase 1 OS=Solanum lycopersicum OX=4081 GN=OPR1 PE=1 SV=1","NADH:flavin oxidoreductase/12-oxophytodienoate reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15967 PE=3 SV=1","C","Energy production and conversion","putative 12-oxophytodienoate reductase 11 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","alpha-Linolenic acid metabolism (ko00592)"]
["c110220.graph_c0",31,2.78,53,4.3,45,5.05,23,2.01,13,1.24,25,2.13,0.000497509,-1.355993973,"down","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1","Putative vesicle-associated protein 1-3 isoform X1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010141 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","vesicle-associated protein 1-3-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c99786.graph_c0",0,0,0,0,1,0.06,55,3.15,67,4.39,76,4.33,6.52e-14,5.439219368,"up","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: G protein-coupled receptor signaling pathway (GO:0007186);; Biological Process: biological_process (GO:0008150);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to alcohol (GO:0097305);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","--","--","--","GGL domain","Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=3702 GN=GG3 PE=2 SV=1","G protein gamma domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0711500 PE=4 SV=1","S","Function unknown","guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c89802.graph_c0",30,2.83,27,2.4,21,2.04,13,1.26,15,1.72,8,0.85,0.005661041,-1.334606079,"down","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K16281|6.5e-37|vvi:104879190|K16281 RING-H2 zinc finger protein RHA1 | (RefSeq) E3 ubiquitin-protein ligase RHA1B-like","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; Zinc finger, C3HC4 type (RING finger)","Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1","RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27874 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable E3 ubiquitin-protein ligase RHA1A [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c115199.graph_c0",10,0.23,6,0.13,17,0.4,66,1.53,91,2.42,112,2.59,2.08e-11,2.580411118,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19590 PE=4 SV=1","--","--","uncharacterized protein LOC111394657 [Olea europaea var. sylvestris]","--","--"]
["c113065.graph_c0",6,0.2,8,0.25,4,0.11,36,1.25,51,1.97,43,1.49,1.35e-06,2.369605153,"up","--","--","--","K15015|1.3e-13|aip:107609646|K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) uncharacterized protein LOC107609646 isoform X1","--","--","--","IQ domain-containing protein IQM4 OS=Arabidopsis thaliana OX=3702 GN=IQM4 PE=2 SV=1","IQ domain-containing protein IQM1-like OS=Nicotiana tabacum OX=4097 GN=LOC107805112 PE=4 SV=1","S","Function unknown","IQ domain-containing protein IQM4-like [Olea europaea var. sylvestris]","--","--"]
["c100005.graph_c0",35,0.47,27,0.35,38,0.79,263,3.24,219,3.13,222,2.65,2.42e-27,2.455765907,"up","--","--","Molecular Function: nucleotide binding (GO:0000166);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Biological Process: leading strand elongation (GO:0006272);; Biological Process: base-excision repair, gap-filling (GO:0006287);; Biological Process: nucleotide-excision repair, DNA gap filling (GO:0006297);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: single-stranded DNA 3'-5' exodeoxyribonuclease activity (GO:0008310);; Cellular Component: epsilon DNA polymerase complex (GO:0008622);; Biological Process: DNA replication proofreading (GO:0045004);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K02324|0.0e+00|sind:105171162|K02324 DNA polymerase epsilon subunit 1 [EC:2.7.7.7] | (RefSeq) DNA polymerase epsilon catalytic subunit A","[L]","Replication, recombination and repair ","Domain of unknown function (DUF1744);; DNA polymerase family B","DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana OX=3702 GN=POL2A PE=1 SV=1","DNA polymerase epsilon catalytic subunit (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a0000431mg PE=3 SV=1","L","Replication, recombination and repair","PREDICTED: DNA polymerase epsilon catalytic subunit A [Erythranthe guttata]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","DNA replication (ko03030);; Base excision repair (ko03410);; Nucleotide excision repair (ko03420)"]
["c99459.graph_c0",1043,46.13,315,13.17,268,12.24,229,10.37,102,5.29,138,6.24,0.003916151,-1.869363494,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K22683|2.1e-65|hbr:110649285|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Aspartic proteinase NANA, chloroplast OS=Arabidopsis thaliana OX=3702 GN=NANA PE=1 SV=1","Aspartic protein nepenthesin-2 OS=Dorcoceras hygrometricum OX=472368 GN=F511_01413 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartic proteinase NANA, chloroplast-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c111146.graph_c2",340,24.26,359,24.13,305,22.43,1196,87.76,1086,92.08,1203,88.31,4.59e-60,1.470751279,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K09422|2.3e-111|oeu:111393160|K09422 transcription factor MYB, plant | (RefSeq) transcription factor MYB8-like","[K]","Transcription ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1","Myb-related protein 330-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_05169 PE=4 SV=1","--","--","transcription factor MYB8-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c112587.graph_c0",52,0.43,54,0.42,61,0.59,174,2.09,152,1.6,205,1.87,5.75e-10,1.322439539,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: ATP binding (GO:0005524);; Biological Process: DNA-dependent DNA replication (GO:0006261);; ","K02349|0.0e+00|oeu:111383137|K02349 DNA polymerase theta [EC:2.7.7.7] | (RefSeq) helicase and polymerase-containing protein TEBICHI-like isoform X1","[R]","General function prediction only ","DNA polymerase family A;; DEAD/DEAH box helicase;; Helicase conserved C-terminal domain","Helicase and polymerase-containing protein TEBICHI OS=Arabidopsis thaliana OX=3702 GN=TEB PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_012451 PE=4 SV=1","A","RNA processing and modification","helicase and polymerase-containing protein TEBICHI-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c109581.graph_c1",5,0.21,3,0.13,4,0.19,20,0.92,26,1.33,35,1.57,0.000211264,2.181180809,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042898 PE=4 SV=1","S","Function unknown","mucin-5AC-like isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c113072.graph_c0",346,12.27,357,11.82,285,10.42,179,6.45,155,6.38,204,7.31,7.78e-18,-1.194399215,"down","--","--","Molecular Function: acid phosphatase activity (GO:0003993);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion binding (GO:0046872);; ","K22390|4.4e-278|oeu:111410516|K22390 acid phosphatase type 7 | (RefSeq) probable inactive purple acid phosphatase 27","[G]","Carbohydrate transport and metabolism ","Fn3-like domain from Purple Acid Phosphatase;; Purple acid Phosphatase, N-terminal domain;; Calcineurin-like phosphoesterase","Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana OX=3702 GN=PAP27 PE=2 SV=1","Purple acid phosphatase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034791 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable inactive purple acid phosphatase 27 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c99899.graph_c0",32,2.41,30,1.86,23,1.44,6,0.38,10,0.75,4,0.27,1.7e-05,-2.211510898,"down","--","--","--","K16280|3.5e-22|oeu:111370134|K16280 E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RGLG5-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1","Reverse transcriptase Ty1/copia-type domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR0G007247 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein CJ030_MR0G007247 [Morella rubra]","--","--"]
["c93867.graph_c0",51,2.59,31,1.49,42,2.19,323,16.74,312,18.53,344,17.74,5.21e-40,2.627069826,"up","--","--","Molecular Function: ubiquitin protein ligase activity (GO:0061630);; ","K11982|8.7e-95|cmos:111458574|K11982 E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase RHC2A","[O]","Posttranslational modification, protein turnover, chaperones ","Protein of unknown function (DUF1117);; zinc-ribbon;; Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS45108 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable E3 ubiquitin-protein ligase RHC2A [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c114805.graph_c2",444,11.45,475,11.51,408,12.07,254,6.58,223,6.64,307,7.93,1.9e-19,-1.081075499,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","K01087|2.8e-09|ccaj:109795950|K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] | (RefSeq) trehalose-phosphate phosphatase A-like","[Z]","Cytoskeleton ","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; MalT-like TPR region;; TPR repeat;; Tetratricopeptide repeat;; Uncharacterized protein conserved in bacteria (DUF2225)","Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=KLCR2 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004953 PE=4 SV=1","Z","Cytoskeleton","protein KINESIN LIGHT CHAIN-RELATED 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Starch and sucrose metabolism (ko00500)"]
["c101495.graph_c0",0,0,0,0,2,0.12,22,1.31,14,0.96,23,1.37,1.74e-05,3.415447686,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: signaling receptor binding (GO:0005102);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; Biological Process: cell communication (GO:0007154);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Biological Process: signaling (GO:0023052);; Biological Process: cell differentiation (GO:0030154);; Biological Process: developmental process (GO:0032502);; Molecular Function: receptor serine/threonine kinase binding (GO:0033612);; Biological Process: cell fate commitment (GO:0045165);; Biological Process: cell-cell signaling involved in cell fate commitment (GO:0045168);; Cellular Component: apoplast (GO:0048046);; Biological Process: cellular developmental process (GO:0048869);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10184 PE=4 SV=1","S","Function unknown","CLAVATA3/ESR (CLE)-related protein 45 [Sesamum indicum]","molecular function: binding (GO:0005488);; cellular component: extracellular region (GO:0005576);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: developmental process (GO:0032502)","--"]
["c103522.graph_c0",31,2.29,23,1.68,25,1.99,12,0.8,11,1,14,0.87,0.004123621,-1.339661173,"down","[IQ]","--","Molecular Function: transferase activity (GO:0016740);; ","K09458|1.9e-72|oeu:111401868|K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] | (RefSeq) 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like","[IQ]","--","Beta-ketoacyl synthase, C-terminal domain","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KAS2 PE=1 SV=1","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Vitis vinifera OX=29760 GN=KAS2_1 PE=3 SV=1","--","--","3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c117878.graph_c0",187,5.7,201,6.22,205,6.68,41,0.99,38,0.99,22,1.15,5.67e-34,-2.827130624,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c94974.graph_c0",42,4.83,39,4.26,36,4.35,12,1.44,17,2.33,20,2.4,0.000145133,-1.511525888,"down","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05658|1.1e-117|oeu:111389761|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] | (RefSeq) ABC transporter B family member 11-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter transmembrane region","ABC transporter B family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCB11 PE=2 SV=1","Putative ABC transporter B family member 11 OS=Davidia involucrata OX=16924 GN=Din_047244 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter B family member 11-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c93351.graph_c0",65,4.17,84,5.51,48,3.59,36,2.03,23,1.54,23,1.41,3.34e-06,-1.532491495,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; ","K22374|1.2e-109|oeu:111379901|K22374 3''-deamino-3''-oxonicotianamine reductase [EC:1.1.1.285] | (RefSeq) methylecgonone reductase-like","[R]","General function prediction only ","Aldo/keto reductase family;; Aldo/keto reductase family","Protein REDOX 2 OS=Catharanthus roseus OX=4058 GN=Redox2 PE=1 SV=1","Probable aldo-keto reductase OS=Olea europaea OX=4146 PE=2 SV=1","S","Function unknown","probable aldo-keto reductase [Olea europaea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c77669.graph_c0",782,136.48,891,145.77,786,140.31,417,74.6,345,70.95,379,67.24,5.67e-49,-1.426111644,"down","[T]","Signal transduction mechanisms ","--","--","--","--","CP12 domain","Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1","CP12 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_000772 PE=4 SV=1","S","Function unknown","calvin cycle protein CP12-1, chloroplastic-like [Olea europaea var. sylvestris]","--","--"]
["c107892.graph_c0",5,0.16,1,0.03,3,0.1,56,2.41,71,3.66,63,2.29,1.01e-12,3.733814568,"up","[R]","General function prediction only ","Molecular Function: protein-arginine N-methyltransferase activity (GO:0016274);; ","K11436|0.0e+00|oeu:111384362|K11436 type I protein arginine methyltransferase [EC:2.1.1.319] | (RefSeq) probable protein arginine N-methyltransferase 3","[OKT]","--","Methyltransferase domain;; Methyltransferase domain;; C2H2 type zinc-finger (2 copies);; Methyltransferase domain;; Ribosomal protein L11 methyltransferase (PrmA);; Protein of unknown function (DUF1698)","Probable protein arginine N-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=PRMT3 PE=2 SV=1","Protein arginine N-methyltransferase PRMT1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19078 PE=4 SV=1","--","--","probable protein arginine N-methyltransferase 3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c116109.graph_c0",200,5,258,5.55,225,5.56,119,3.32,132,4.78,128,3.63,6.26e-12,-1.159238946,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","uncharacterized protein LOC107805418 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107805418 PE=4 SV=1","--","--","uncharacterized protein LOC111397526 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106341.graph_c2",230,11.27,215,9.94,203,10.19,798,40.03,576,32.93,690,34.26,4.42e-27,1.340145354,"up","[L]","Replication, recombination and repair ","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA recombination (GO:0006310);; ","K10899|4.8e-132|sind:105168938|K10899 ATP-dependent DNA helicase Q1 [EC:3.6.4.12] | (RefSeq) ATP-dependent DNA helicase Q-like 1 isoform X1","[L]","Replication, recombination and repair ","Helicase conserved C-terminal domain;; RecQ zinc-binding","ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1","ATP-dependent DNA helicase OS=Dorcoceras hygrometricum OX=472368 GN=F511_21892 PE=3 SV=1","L","Replication, recombination and repair","ATP-dependent DNA helicase Q-like 1 isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152)","--"]
["c87421.graph_c0",12,1.7,10,1.2,12,1.77,37,4.88,42,6.45,51,6.9,0.000369559,1.528440983,"up","--","--","--","K13206|1.0e-17|ghi:107902778|K13206 coiled-coil domain-containing protein 55 | (RefSeq) LOW QUALITY PROTEIN: nuclear speckle splicing regulatory protein 1","--","--","--","Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02047 PE=4 SV=1","--","--","uncharacterized protein LOC111412856 [Olea europaea var. sylvestris]","--","--"]
["c110210.graph_c0",553,9.93,644,10.97,574,10.64,168,3.08,142,2.99,210,3.85,3.78e-64,-2.086676736,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: ATP binding (GO:0005524);; Biological Process: protein folding (GO:0006457);; Molecular Function: unfolded protein binding (GO:0051082);; ","K04079|0.0e+00|oeu:111398557|K04079 molecular chaperone HtpG | (RefSeq) heat shock protein 83-like","[O]","Posttranslational modification, protein turnover, chaperones ","Hsp90 protein;; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase","Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1","Heat shock protein 2 OS=Tectona grandis OX=41396 GN=Hsp2 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","heat shock protein 83-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)","Protein processing in endoplasmic reticulum (ko04141);; Plant-pathogen interaction (ko04626)"]
["c107889.graph_c2",1,0.33,2,0.33,0,0,34,7.65,30,5.79,34,7.01,3.42e-08,3.868025072,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; ","--","--","--","--","Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1","Putative IQ-domain 24 OS=Davidia involucrata OX=16924 GN=Din_019609 PE=3 SV=1","S","Function unknown","protein IQ-DOMAIN 14-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c115564.graph_c3",160,4.37,165,4.16,134,3.77,86,3.33,83,4.23,107,4.9,5.98e-08,-1.04683496,"down","--","--","Molecular Function: RNA cap binding (GO:0000339);; Cellular Component: P-body (GO:0000932);; Biological Process: nuclear-transcribed mRNA catabolic process (GO:0000956);; Biological Process: mRNA processing (GO:0006397);; ","--","--","--","--","Sm-like protein LSM1B OS=Arabidopsis thaliana OX=3702 GN=LSM1B PE=1 SV=1","U6 snRNA-associated Sm-like protein LSm1 OS=Salvia splendens OX=180675 GN=LSM1 PE=3 SV=1","--","--","U6 snRNA-associated Sm-like protein LSm1 [Salvia splendens]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c99061.graph_c0",147,9.81,144,9.14,161,11.05,574,39.19,507,39.66,537,36.46,2.16e-30,1.508798793,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09719 PE=4 SV=1","K","Transcription","transcription factor bHLH149-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c92856.graph_c0",38,1.44,28,0.94,39,1.45,3,0.13,19,0.88,7,0.26,8.32e-05,-2.00009647,"down","--","--","Biological Process: amino acid transmembrane transport (GO:0003333);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: amino acid transmembrane transporter activity (GO:0015171);; Cellular Component: integral component of membrane (GO:0016021);; ","K15015|5.8e-10|crb:17882706|K15015 solute carrier family 32 (vesicular inhibitory amino acid transporter) | (RefSeq) amino acid transporter AVT1E isoform X1","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein","Amino acid permease 2 OS=Arabidopsis thaliana OX=3702 GN=AAP2 PE=1 SV=1","Aa_trans domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004721mg PE=4 SV=1","E","Amino acid transport and metabolism","PREDICTED: amino acid permease 4-like [Erythranthe guttata]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; cellular component: membrane part (GO:0044425)","--"]
["c103438.graph_c0",3,0.37,4,0.13,10,0.37,28,1.2,34,1.58,26,1.26,0.000825729,1.86821472,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12080 PE=4 SV=1","--","--","hypothetical protein CDL12_12080 [Handroanthus impetiginosus]","--","--"]
["c107173.graph_c0",1417,63.55,1236,54.05,1093,50.32,701,30.96,711,35.71,741,33.14,4.2e-34,-1.115911264,"down","--","--","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: glucan endo-1,3-beta-D-glucosidase activity (GO:0042973);; ","K19891|1.5e-66|eus:EUTSA_v10004013mg|K19891 glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39] | (RefSeq) hypothetical protein","--","--","Glycosyl hydrolases family 17","Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2","Glucan endo-1,3-beta-D-glucosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20699 PE=3 SV=1","G","Carbohydrate transport and metabolism","glucan endo-1,3-beta-D-glucosidase-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Starch and sucrose metabolism (ko00500)"]
["c111393.graph_c0",306,15.69,353,17.1,299,15.78,221,11.59,196,11.78,174,9.32,4.9e-12,-1.007817694,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K01176|1.6e-56|oeu:111386620|K01176 alpha-amylase [EC:3.2.1.1] | (RefSeq) alpha-amylase 3, chloroplastic","[G]","Carbohydrate transport and metabolism ","--","Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AMY3 PE=1 SV=1","1,4-alpha-D-glucan glucanohydrolase OS=Citrus unshiu OX=55188 GN=CUMW_023050 PE=4 SV=1","G","Carbohydrate transport and metabolism","alpha-amylase 3, chloroplastic-like, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152)","Starch and sucrose metabolism (ko00500)"]
["c116996.graph_c0",316,5.85,303,5.35,326,6.2,9,0.18,2,0.05,2,0.04,7.74e-60,-6.213288953,"down","--","--","--","K14300|4.6e-47|pda:103721930|K14300 nuclear pore complex protein Nup133 | (RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP133","--","--","Transposase family tnp2;; Domain of unknown function (DUF4218);; Transposase-associated domain;; Domain of unknown function (DUF4216)","--","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009493 PE=4 SV=1","S","Function unknown","hypothetical protein CK203_009493 [Vitis vinifera]","--","RNA transport (ko03013)"]
["c112788.graph_c1",43,1.89,41,1.74,37,1.63,222,10.01,246,12.85,300,13.29,4.64e-28,2.313219886,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","Protein of unknown function (DUF724)","DUF724 domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=DUF7 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00004954001 PE=4 SV=1","S","Function unknown","DUF724 domain-containing protein 7-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c112416.graph_c1",359,20.44,397,21.91,280,17.61,1195,66.58,959,59.85,1150,63.17,1.67e-38,1.348109523,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","[IM]","--","--","--","Ceramide glucosyltransferase (Fragment) OS=Dorcoceras hygrometricum OX=472368 GN=F511_17659 PE=3 SV=1","--","--","uncharacterized protein LOC111407873 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c108623.graph_c0",62,3.71,80,4.39,88,5.5,271,17.11,285,21.06,269,17.69,6.76e-16,1.508135559,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","Homeodomain","WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1","WUSCHEL-related homeobox transcription factor 13 variant 1 OS=Jasminum sambac OX=660624 GN=WOX13x1 PE=2 SV=1","K","Transcription","WUSCHEL-related homeobox 8-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c115331.graph_c0",28,0.57,23,0.63,23,0.48,79,1.98,71,3.67,99,2.53,7.18e-06,1.385448051,"up","--","--","Molecular Function: carbohydrate binding (GO:0030246);; ","K03695|2.3e-16|aip:107635377|K03695 ATP-dependent Clp protease ATP-binding subunit ClpB | (RefSeq) chaperone protein ClpB3, chloroplastic","--","--","Jacalin-like lectin domain;; Jacalin-like lectin domain","Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1","jacalin-related lectin 3-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107782785 PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g19720 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c89946.graph_c0",66,10.29,88,12.88,76,12.12,319,50.97,321,58.82,308,48.85,8.07e-23,1.711304398,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: protein folding (GO:0006457);; ","K04078|9.7e-48|oeu:111374000|K04078 chaperonin GroES | (RefSeq) 10 kDa chaperonin, mitochondrial-like","[O]","Posttranslational modification, protein turnover, chaperones ","Chaperonin 10 Kd subunit","10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022881001 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","10 kDa chaperonin, mitochondrial-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987)","--"]
["c115374.graph_c0",171,4.87,187,5.19,151,3.87,106,2.13,90,1.78,108,2.23,6.32e-09,-1.05644559,"down","[K]","Transcription ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Biological Process: transcription, DNA-templated (GO:0006351);; ","K10908|0.0e+00|oeu:111367888|K10908 DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6] | (RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X1","[KL]","--","DNA-directed RNA polymerase N-terminal;; DNA-dependent RNA polymerase;; DNA-dependent RNA polymerase","DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2","DNA-directed RNA polymerase OS=Nyssa sinensis OX=561372 GN=F0562_004294 PE=3 SV=1","--","--","DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X4 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c106059.graph_c0",18,0.61,36,1.16,14,0.5,141,5.01,122,4.97,163,5.7,5.3e-15,2.273907107,"up","[G]","Carbohydrate transport and metabolism ","--","K01369|4.8e-30|apro:F751_1333|K01369 legumain [EC:3.4.22.34] | (RefSeq) Vacuolar-processing enzyme beta-isozyme","[B]","Chromatin structure and dynamics ","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_048246 PE=4 SV=1","B","Chromatin structure and dynamics","uncharacterized protein LOC111395775 [Olea europaea var. sylvestris]","--","--"]
["c117803.graph_c0",5,0.06,4,0.13,6,0.08,71,1.31,83,1.72,97,1.53,1.23e-15,3.523971605,"up","--","--","--","K01426|1.5e-19|vvi:100248659|K01426 amidase [EC:3.5.1.4] | (RefSeq) putative amidase C869.01","--","--","gag-polypeptide of LTR copia-type","--","Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR1G005712 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111379803 [Olea europaea var. sylvestris]","--","Arginine and proline metabolism (ko00330);; Phenylalanine metabolism (ko00360);; Tryptophan metabolism (ko00380)"]
["c110989.graph_c0",9,0.75,5,0.17,2,0.09,39,1.45,36,1.78,55,1.85,9.74e-07,2.494076526,"up","--","--","Cellular Component: host cell nucleus (GO:0042025);; ","K21777|0.0e+00|oeu:111395860|K21777 G2/mitotic-specific cyclin-B, other | (RefSeq) putative cyclin-B3-1","[D]","Cell cycle control, cell division, chromosome partitioning ","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","Putative cyclin-B3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCB3-1 PE=3 SV=2","Putative cyclin-B3-1 isoform X2 OS=Davidia involucrata OX=16924 GN=Din_003282 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","putative cyclin-B3-1 [Olea europaea var. sylvestris]","cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c106816.graph_c1",134,2.25,158,2.44,122,1.95,1011,17.51,896,18.36,987,17.78,7.28e-103,2.475565709,"up","--","--","--","K22911|1.7e-31|psom:113299743|K22911 thiamine phosphate phosphatase / amino-HMP aminohydrolase [EC:3.1.3.100 3.5.99.-] | (RefSeq) bifunctional TH2 protein, mitochondrial-like","--","--","--","--","DUF659 domain-containing protein OS=Solanum tuberosum OX=4113 GN=102606051 PE=4 SV=1","--","--","uncharacterized protein LOC111398488 isoform X2 [Olea europaea var. sylvestris]","--","Thiamine metabolism (ko00730)"]
["c106713.graph_c0",33,2.32,47,2.73,53,3.74,30,6.23,14,2.22,17,3.26,0.000429973,-1.394333701,"down","--","--","--","K07760|9.2e-06|zma:109941183|K07760 cyclin-dependent kinase [EC:2.7.11.22] | (RefSeq) cyclin-dependent kinase B2-1","[O]","Posttranslational modification, protein turnover, chaperones ","--","--","Chaperone protein dnaJ 10 OS=Dorcoceras hygrometricum OX=472368 GN=F511_22568 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","unnamed protein product [Prunus armeniaca]","--","--"]
["c104107.graph_c0",26,1.99,30,2.15,26,2.29,172,14.4,258,24.48,259,20.82,1.06e-26,2.704894378,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113811.graph_c0",68,5.17,92,6.81,88,6.93,702,32.36,629,34.72,727,34.2,1.18e-83,2.713858979,"up","--","--","Molecular Function: 3-hydroxybutyrate dehydrogenase activity (GO:0003858);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: NADP binding (GO:0050661);; Molecular Function: NAD binding (GO:0051287);; ","K18121|4.3e-08|oeu:111393721|K18121 glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-] | (RefSeq) glyoxylate/succinic semialdehyde reductase 1","--","--","--","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00016533001 PE=4 SV=1","I","Lipid transport and metabolism","unnamed protein product [Coffea canephora]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","Glyoxylate and dicarboxylate metabolism (ko00630);; Butanoate metabolism (ko00650);; Carbon metabolism (ko01200)"]
["c110881.graph_c0",58,2.75,47,2,43,1.87,2,0.11,3,0.19,2,0.11,1.01e-14,-4.258119458,"down","[V]","Defense mechanisms ","Molecular Function: antiporter activity (GO:0015297);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K20456|2.4e-59|smo:SELMODRAFT_417928|K20456 oxysterol-binding protein 1 | (RefSeq) hypothetical protein","[R]","General function prediction only ","MatE;; Polysaccharide biosynthesis C-terminal domain","Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2","Protein DETOXIFICATION OS=Coffea canephora OX=49390 GN=GSCOC_T00004154001 PE=3 SV=1","V","Defense mechanisms","protein DETOXIFICATION 42-like isoform X5 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c104186.graph_c0",12,1.13,3,0.18,9,0.6,39,5.06,39,4.71,47,5.36,6.36e-05,1.917867696,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117022.graph_c0",83,6.05,90,4.74,65,3.84,323,13.48,287,14.04,333,13.63,7.87e-23,1.652394401,"up","--","--","--","--","--","--","Transcription factor regulating root and shoot growth via Pin3;; Transcription factor BRX N-terminal domain","Protein Brevis radix-like 2 OS=Arabidopsis thaliana OX=3702 GN=BRXL2 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02572 PE=4 SV=1","S","Function unknown","protein Brevis radix-like 2 [Olea europaea var. sylvestris]","--","--"]
["c111866.graph_c0",5,0.14,12,0.6,3,0.08,58,1.94,50,1.46,58,3.19,2.02e-08,2.574337969,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02995|1.2e-23|mesc:110611077|K02995 small subunit ribosomal protein S8e | (RefSeq) 40S ribosomal protein S8","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S8e;; Ribosomal protein S8e","40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2","40S ribosomal protein S8 OS=Manihot esculenta OX=3983 GN=MANES_03G134200 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","40S ribosomal protein S8 [Manihot esculenta]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c116957.graph_c0",48,2.38,60,2.77,42,2.12,156,7.81,173,9.92,165,8.2,7.31e-10,1.385889613,"up","--","--","--","--","--","--","--","--","Mediator of RNA polymerase II transcription subunit 25 OS=Morus notabilis OX=981085 GN=L484_013924 PE=3 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111371244 [Olea europaea var. sylvestris]","--","--"]
["c82240.graph_c0",0,0,0,0,4,0.22,24,1.33,28,1.77,27,1.48,3.48e-06,3.285224286,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA replication (GO:0006260);; Biological Process: regulation of DNA replication (GO:0006275);; Molecular Function: DNA polymerase processivity factor activity (GO:0030337);; ","K04802|9.2e-171|oeu:111383639|K04802 proliferating cell nuclear antigen | (RefSeq) proliferating cell nuclear antigen-like","[L]","Replication, recombination and repair ","Proliferating cell nuclear antigen, C-terminal domain;; Proliferating cell nuclear antigen, N-terminal domain;; Rad9;; Repair protein Rad1/Rec1/Rad17","Proliferating cell nuclear antigen large form OS=Daucus carota OX=4039 PE=2 SV=1","Proliferating cell nuclear antigen OS=Artemisia annua OX=35608 GN=CTI12_AA392360 PE=3 SV=1","L","Replication, recombination and repair","proliferating cell nuclear antigen-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: molecular function regulator (GO:0098772)","DNA replication (ko03030);; Base excision repair (ko03410);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430)"]
["c112900.graph_c0",891,29.94,877,27.53,752,25.77,2150,73.06,2069,80.6,2293,77.61,6.35e-50,1.047303645,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: protein disulfide isomerase activity (GO:0003756);; Biological Process: cell redox homeostasis (GO:0045454);; ","K09580|8.9e-309|oeu:111403550|K09580 protein disulfide-isomerase A1 [EC:5.3.4.1] | (RefSeq) protein disulfide isomerase-like 1-4","[O]","Posttranslational modification, protein turnover, chaperones ","Thioredoxin;; Thioredoxin-like domain;; Thioredoxin-like;; OST3 / OST6 family, transporter family;; Thioredoxin-like;; Thioredoxin-like domain;; AhpC/TSA family;; Thioredoxin domain","Protein disulfide isomerase-like 1-4 OS=Arabidopsis thaliana OX=3702 GN=PDIL1-4 PE=1 SV=1","Protein disulfide-isomerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09846 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein disulfide isomerase-like 1-4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","Protein processing in endoplasmic reticulum (ko04141)"]
["c98785.graph_c0",476,28.42,467,26.06,513,32.3,110,6.1,143,8.71,208,11.97,3.85e-35,-1.976974011,"down","[IQ]","--","Molecular Function: catalytic activity (GO:0003824);; ","K22133|1.9e-31|oeu:111390788|K22133 oxalate---CoA ligase [EC:6.2.1.8] | (RefSeq) oxalate--CoA ligase-like","[I]","Lipid transport and metabolism ","--","Oxalate--CoA ligase OS=Arabidopsis thaliana OX=3702 GN=AAE3 PE=1 SV=1","4-coumarate--CoA ligase OS=Fraxinus mandshurica OX=56029 GN=4CL13 PE=2 SV=1","I","Lipid transport and metabolism","4CL13 [Fraxinus mandshurica]","molecular function: catalytic activity (GO:0003824)","Glyoxylate and dicarboxylate metabolism (ko00630)"]
["c94991.graph_c0",70,5.34,75,5.46,57,4.51,22,1.61,25,2,17,1.2,4.74e-09,-1.912095196,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c87067.graph_c0",4,1.09,4,1.01,3,0.83,30,8.35,28,8.96,30,8.27,2.72e-05,2.417786486,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92736.graph_c0",6,0.37,3,0.17,4,0.25,25,1.57,34,2.45,51,3.19,5.22e-06,2.50515501,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; ","--","--","--","bZIP transcription factor;; Basic region leucine zipper","Basic leucine zipper 4 OS=Arabidopsis thaliana OX=3702 GN=BZIP4 PE=1 SV=1","Basic leucine-zipper 5 OS=Dorcoceras hygrometricum OX=472368 GN=F511_08183 PE=4 SV=1","K","Transcription","bZIP transcription factor 2-like isoform X1 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c111970.graph_c0",61,2.05,66,1.38,72,1.74,273,6.74,266,7.5,266,6.74,6.3e-20,1.679029281,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: copper ion binding (GO:0005507);; Biological Process: cellular ion homeostasis (GO:0006873);; Biological Process: cellular metal ion homeostasis (GO:0006875);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Biological Process: biological_process (GO:0008150);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: cellular process (GO:0009987);; Biological Process: cellular homeostasis (GO:0019725);; Biological Process: cellular cation homeostasis (GO:0030003);; Biological Process: homeostatic process (GO:0042592);; Molecular Function: ion binding (GO:0043167);; Molecular Function: cation binding (GO:0043169);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: transition metal ion binding (GO:0046914);; Biological Process: cellular transition metal ion homeostasis (GO:0046916);; Biological Process: chemical homeostasis (GO:0048878);; Biological Process: ion homeostasis (GO:0050801);; Biological Process: metal ion homeostasis (GO:0055065);; Biological Process: copper ion homeostasis (GO:0055070);; Biological Process: transition metal ion homeostasis (GO:0055076);; Biological Process: cation homeostasis (GO:0055080);; Biological Process: cellular chemical homeostasis (GO:0055082);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: inorganic ion homeostasis (GO:0098771);; ","--","--","--","--","Metallothionein-like protein type 3 OS=Actinidia deliciosa OX=3627 GN=pKIWI503 PE=2 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10356 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c95280.graph_c0",7,0.26,5,0.18,2,0.08,40,1.54,51,2.25,43,1.65,1.09e-07,2.722738558,"up","[I]","Lipid transport and metabolism ","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: phospholipase A1 activity (GO:0008970);; Molecular Function: phosphatidylserine 1-acylhydrolase activity (GO:0052739);; Molecular Function: 1-acyl-2-lysophosphatidylserine acylhydrolase activity (GO:0052740);; ","K16818|1.1e-73|gmx:100817287|K16818 phospholipase A1 [EC:3.1.1.32] | (RefSeq) phospholipase A(1) DAD1, chloroplastic","[I]","Lipid transport and metabolism ","Lipase (class 3)","Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g06800 PE=1 SV=2","Putative lipase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24398 PE=4 SV=1","I","Lipid transport and metabolism","phospholipase A1-Igamma1, chloroplastic-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Glycerophospholipid metabolism (ko00564);; alpha-Linolenic acid metabolism (ko00592)"]
["c112827.graph_c2",63,1.66,73,2.47,63,1.44,256,7.37,253,7.71,318,9.12,3.31e-21,1.714774086,"up","[I]","Lipid transport and metabolism ","Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Biological Process: fatty acid metabolic process (GO:0006631);; Molecular Function: 3-hydroxybutyryl-CoA epimerase activity (GO:0008692);; ","K10527|5.7e-150|sind:105165214|K10527 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211] | (RefSeq) glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a isoform X1","[I]","Lipid transport and metabolism ","3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;; Enoyl-CoA hydratase/isomerase;; Enoyl-CoA hydratase/isomerase","Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis sativus OX=3659 PE=1 SV=1","3-hydroxyacyl-CoA dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18658 PE=3 SV=1","I","Lipid transport and metabolism","glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a isoform X2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Fatty acid degradation (ko00071);; alpha-Linolenic acid metabolism (ko00592);; Fatty acid metabolism (ko01212)"]
["c116056.graph_c0",5,0.35,17,0.7,17,1.25,79,2.66,67,2.79,104,3.26,2.04e-09,2.254659583,"up","--","--","--","--","[A]","RNA processing and modification ","--","--","Mitochondrial phosphate carrier protein 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111989pilonHSYRG00168 PE=3 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111370433 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c42202.graph_c0",74,46.1,39,22.19,37,22.86,174,111.16,138,102.28,163,102.54,2.31e-07,1.315627442,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: protein folding (GO:0006457);; Molecular Function: chaperone binding (GO:0051087);; Biological Process: chaperone-mediated protein complex assembly (GO:0051131);; Molecular Function: Hsp90 protein binding (GO:0051879);; ","K15730|2.3e-26|hbr:110660945|K15730 cytosolic prostaglandin-E synthase [EC:5.3.99.3] | (RefSeq) uncharacterized protein OsI_027940-like","[O]","Posttranslational modification, protein turnover, chaperones ","CS domain","Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2","CS domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g00250 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein Os08g0359500 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)","Arachidonic acid metabolism (ko00590)"]
["c115316.graph_c1",749,17.5,844,18.61,791,18.96,278,6.29,284,7.35,261,5.92,3.65e-67,-1.847676995,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","--","[R]","General function prediction only ","Leucine Rich repeats (2 copies);; Leucine Rich repeat;; F-box-like;; F-box domain","F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1","F-box domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_041024 PE=4 SV=1","S","Function unknown","F-box protein At5g67140-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c117485.graph_c0",124,6.7,173,8.83,117,6.44,294,16.24,351,22.15,404,22.18,1.46e-09,1.015821701,"up","--","--","--","K15730|6.3e-11|adu:107475934|K15730 cytosolic prostaglandin-E synthase [EC:5.3.99.3] | (RefSeq) uncharacterized protein OsI_027940","[O]","Posttranslational modification, protein turnover, chaperones ","--","Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1","HSP20-like chaperones superfamily protein OS=Striga asiatica OX=4170 GN=STAS_22742 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein At3g03773 isoform X1 [Olea europaea var. sylvestris]","--","Arachidonic acid metabolism (ko00590)"]
["c109079.graph_c0",114,6.91,105,5.77,106,5.9,48,3.25,65,5.04,74,4.83,3.54e-06,-1.104179676,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","ANK_REP_REGION domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G165832v2 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111370148 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106947.graph_c1",82,18.74,79,17.22,89,20.62,49,10.95,31,6.71,36,8.43,4.25e-07,-1.405964198,"down","--","--","Molecular Function: ligase activity (GO:0016874);; ","--","--","--","--","--","Putative E3 ubiquitin ligase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20390 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin-protein ligase MBR2-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c106050.graph_c0",102,3.38,85,2.65,77,2.62,3375,115.89,3605,141.09,4041,137.5,0,5.043409339,"up","--","--","--","--","--","--","Protein of unknown function (DUF642);; Protein of unknown function (DUF642)","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_037748 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111383156 [Olea europaea var. sylvestris]","--","--"]
["c98939.graph_c0",477,31.1,579,36.74,452,31.28,8,1.02,9,0.76,0,0,6.89e-15,-5.553369241,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103714.graph_c0",42,1.49,30,1.02,27,0.99,363,13.31,413,17.35,460,16.78,1.3e-58,3.282174679,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","TPR-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31117 PE=4 SV=1","--","--","uncharacterized protein LOC105176468 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100277.graph_c0",69,1.21,43,0.71,54,0.97,144,2.54,122,2.47,179,3.15,7.53e-06,1.072951792,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K01537|0.0e+00|oeu:111411959|K01537 P-type Ca2+ transporter type 2C [EC:7.2.2.10] | (RefSeq) calcium-transporting ATPase, endoplasmic reticulum-type-like","[P]","Inorganic ion transport and metabolism ","E1-E2 ATPase;; Cation transporting ATPase, C-terminus;; haloacid dehalogenase-like hydrolase;; Cation transporter/ATPase, N-terminus;; Cation transport ATPase (P-type);; haloacid dehalogenase-like hydrolase","Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum OX=4081 GN=LCA1 PE=2 SV=1","Cation_ATPase_N domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014953 PE=4 SV=1","P","Inorganic ion transport and metabolism","calcium-transporting ATPase, endoplasmic reticulum-type-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c93835.graph_c0",892,42.45,918,41.27,890,43.62,5189,251.85,4482,249.33,5058,244.42,3.14e-261,2.121587435,"up","[I]","Lipid transport and metabolism ","Biological Process: steroid biosynthetic process (GO:0006694);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; ","K08242|3.6e-208|oeu:111381992|K08242 24-methylenesterol C-methyltransferase [EC:2.1.1.143] | (RefSeq) 24-methylenesterol C-methyltransferase 2-like","[IR]","--","Sterol methyltransferase C-terminal;; Methyltransferase domain;; Methyltransferase domain;; Mycolic acid cyclopropane synthetase;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; ubiE/COQ5 methyltransferase family","24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=SMT2 PE=1 SV=2","Methyltransferase OS=Olea europaea subsp. europaea OX=158383 GN=SMT2 PE=2 SV=1","I","Lipid transport and metabolism","24-methylenesterol C-methyltransferase 2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Steroid biosynthesis (ko00100)"]
["c113146.graph_c0",3,0.19,3,0.15,2,0.12,24,2.36,27,2.22,31,3.88,1.54e-05,2.679652559,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K03327|7.5e-33|dcr:108221727|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 3-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Retrotransposon gag protein;; GAG-pre-integrase domain","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Gag-pol polyprotein OS=Populus deltoides OX=3696 GN=60I2G14 PE=4 SV=1","L","Replication, recombination and repair","gag-pol polyprotein [Populus deltoides]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c102540.graph_c0",25,5.03,23,3.9,26,6.57,62,6.91,63,7.68,115,12.4,8.61e-05,1.318291353,"up","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111394946 [Olea europaea var. sylvestris]","--","--"]
["c89484.graph_c0",19,2.08,39,3.82,33,3.71,2,0.22,2,0.26,0,0,9.54e-10,-4.070388455,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","Apolipophorin-III precursor (apoLp-III)","--","Apolipophorin-3 (Fragment) OS=Anthurium amnicola OX=1678845 GN=APL3_0 PE=4 SV=1","--","--","--","cellular component: extracellular region (GO:0005576);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c98297.graph_c0",95,14.89,97,13.4,103,16.83,52,10.3,63,13.43,58,11.89,9.9e-06,-1.073441675,"down","--","--","Biological Process: L-arabinose metabolic process (GO:0046373);; Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);; ","K09955|1.2e-25|oeu:111393278|K09955 uncharacterized protein | (RefSeq) uncharacterized protein LOC111393278","--","--","Beta-L-arabinofuranosidase, GH127","--","Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_003040 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111393278 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c102250.graph_c0",81,2.86,96,3.1,100,3.83,572,24.32,481,23.12,490,19.55,5.16e-45,2.141834116,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: oxygen-dependent protoporphyrinogen oxidase activity (GO:0004729);; Biological Process: protoporphyrinogen IX biosynthetic process (GO:0006782);; ","K00231|4.1e-234|sind:105177408|K00231 protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] | (RefSeq) protoporphyrinogen oxidase, mitochondrial isoform X2","[H]","Coenzyme transport and metabolism ","Flavin containing amine oxidoreductase;; NAD(P)-binding Rossmann-like domain;; FAD dependent oxidoreductase;; FAD binding domain","Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII PE=1 SV=1","Protoporphyrinogen oxidase OS=Davidia involucrata OX=16924 GN=Din_022192 PE=3 SV=1","H","Coenzyme transport and metabolism","protoporphyrinogen oxidase, mitochondrial isoform X2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Porphyrin and chlorophyll metabolism (ko00860)"]
["c111040.graph_c2",119,5.16,171,6.69,128,4.44,354,12.53,351,14.08,367,13.28,1.58e-11,1.034423093,"up","--","--","Biological Process: intracellular protein transport (GO:0006886);; Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450);; Cellular Component: outer membrane (GO:0019867);; ","--","--","--","Surface antigen variable number repeat","Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC75-3 PE=1 SV=1","TOC75-3 OS=Catalpa bungei OX=265496 PE=2 SV=1","M","Cell wall/membrane/envelope biogenesis","protein TOC75-3, chloroplastic-like [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; molecular function: transporter activity (GO:0005215);; cellular component: membrane (GO:0016020)","--"]
["c115315.graph_c0",212,5.14,183,3.39,161,3.61,600,14.22,550,14.78,668,14.72,3.12e-29,1.379428822,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: alpha-L-arabinofuranosidase activity (GO:0046556);; ","K15920|1.6e-212|smo:SELMODRAFT_101733|K15920 xylan 1,4-beta-xylosidase [EC:3.2.1.37] | (RefSeq) hypothetical protein","--","--","Glycosyl hydrolase family 3 C-terminal domain;; Glycosyl hydrolase family 3 N terminal domain;; Fibronectin type III-like domain;; Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y","Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2","Non-reducing end alpha-L-arabinofuranosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02534 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable beta-D-xylosidase 7 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c111529.graph_c0",4,0.1,2,0.05,3,0.07,18,0.44,14,0.39,17,0.41,0.007901384,1.824346076,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K22733|1.6e-92|cit:102612526|K22733 magnesium transporter | (RefSeq) uncharacterized protein LOC102612526","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E49 PE=2 SV=1","Pentatricopeptide repeat protein OS=Salvia miltiorrhiza OX=226208 PE=2 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At2g37310 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c109591.graph_c0",15,1.53,12,1.49,3,0.32,195,22.5,296,42.87,290,35.05,1.84e-18,4.111596491,"up","[IQ]","--","Molecular Function: ligase activity (GO:0016874);; ","K01904|7.0e-33|oeu:111412792|K01904 4-coumarate--CoA ligase [EC:6.2.1.12] | (RefSeq) 4-coumarate--CoA ligase 2 isoform X4","[I]","Lipid transport and metabolism ","--","4-coumarate--CoA ligase 1 OS=Nicotiana tabacum OX=4097 GN=4CL1 PE=2 SV=1","4-coumarate--CoA ligase OS=Fraxinus mandshurica OX=56029 GN=4CL PE=4 SV=1","I","Lipid transport and metabolism","4-coumarate:coenzyme A ligase 4 [Fraxinus mandshurica]","molecular function: catalytic activity (GO:0003824)","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Phenylpropanoid biosynthesis (ko00940)"]
["c104825.graph_c1",7,0.76,5,0.65,5,0.6,20,1.96,19,3.3,28,6.53,0.009958529,1.496734981,"up","--","--","--","--","--","--","--","CASP-like protein 5C1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_38237 PE=2 SV=1","CASP-like protein OS=Morella rubra OX=262757 GN=CJ030_MR7G011534 PE=3 SV=1","S","Function unknown","CASP-like protein 5C1 [Olea europaea var. sylvestris]","--","--"]
["c85071.graph_c0",7,0.37,8,0.44,8,0.48,152,8.58,135,8.69,147,8.39,2.09e-26,3.771884636,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K16296|2.1e-37|var:108346660|K16296 serine carboxypeptidase-like clade I [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 12","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Plant PDR ABC transporter associated;; ABC transporter","ABC transporter G family member 39 OS=Arabidopsis thaliana OX=3702 GN=ABCG39 PE=3 SV=1","Pleiotropic drug resistance protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20832 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","pleiotropic drug resistance protein 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c111632.graph_c1",0,0,0,0,0,0,38,19.23,40,17.21,50,22.25,8.39e-11,5.29936857,"up","--","--","--","K01768|4.6e-40|ghi:107911085|K01768 adenylate cyclase [EC:4.6.1.1] | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC107911085","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Domain of unknown function (DUF4219);; Retrotransposon gag protein","--","Signal peptidase complex catalytic subunit SEC11C OS=Cajanus cajan OX=3821 GN=KK1_010604 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111366977 [Olea europaea var. sylvestris]","--","Purine metabolism (ko00230)"]
["c117007.graph_c1",68,2.44,37,1.26,30,1.06,151,5.16,287,11.35,255,8.88,2.07e-05,1.935642617,"up","[I]","Lipid transport and metabolism ","Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765);; ","K11778|1.2e-151|oeu:111397699|K11778 ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87] | (RefSeq) dehydrodolichyl diphosphate synthase 6-like","[I]","Lipid transport and metabolism ","Putative undecaprenyl diphosphate synthase","Dehydrodolichyl diphosphate synthase CPT3 OS=Solanum lycopersicum OX=4081 GN=CPT3 PE=1 SV=1","Alkyl transferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_22153 PE=3 SV=1","I","Lipid transport and metabolism","dehydrodolichyl diphosphate synthase 6-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Terpenoid backbone biosynthesis (ko00900)"]
["c93609.graph_c0",91,12.15,107,12.95,80,11.06,40,5.76,40,6.91,47,6.39,3.09e-08,-1.424655598,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein of unknown function (DUF1218)","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011700 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111388029 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c117911.graph_c1",132,8.94,128,8.18,104,7.24,49,3.47,56,4.43,64,4.81,6.74e-10,-1.407546924,"down","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K14638|2.6e-25|egr:104449894|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 1.2","--","--","--","Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13690 PE=4 SV=1","K","Transcription","transcription factor bHLH68-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c98739.graph_c0",11,0.74,5,0.32,9,0.62,30,2.13,40,3.15,44,3.07,0.000288523,1.744367569,"up","--","--","--","K03126|1.1e-07|oeu:111374703|K03126 transcription initiation factor TFIID subunit 12 | (RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_008906 PE=4 SV=1","--","--","uncharacterized protein LOC111382596 [Olea europaea var. sylvestris]","--","Basal transcription factors (ko03022)"]
["c90408.graph_c0",40,1.92,70,4,80,4.59,0,0,0,0,0,0,2.01e-16,-6.31153753,"down","--","--","--","K05643|7.4e-28|oeu:111365874|K05643 ATP-binding cassette, subfamily A (ABC1), member 3 | (RefSeq) ABC transporter A family member 1","--","--","--","--","--","--","--","ABC transporter A family member 1 [Olea europaea var. sylvestris]","--","ABC transporters (ko02010)"]
["c99700.graph_c0",33,2.08,116,6.96,113,7.33,5,0.32,14,1.03,2,0.13,4.29e-05,-3.150603926,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Anthurium amnicola OX=1678845 GN=g.46095 PE=4 SV=1","--","--","--","--","--"]
["c101564.graph_c0",11,0.44,8,0.3,9,0.37,19,0.77,42,2.16,35,1.42,0.007526768,1.363573704,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K19476|9.1e-86|cic:CICLE_v10026997mg|K19476 vacuolar protein sorting-associated protein IST1 | (RefSeq) hypothetical protein","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein","Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1","Amino acid transporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23050 PE=4 SV=1","E","Amino acid transport and metabolism","lysine histidine transporter-like 8 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Endocytosis (ko04144)"]
["c105282.graph_c0",3499,109.61,4024,118.99,3681,117.49,2047,77.77,1867,81.03,2325,86.56,1.4e-80,-1.16893653,"down","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","K12356|4.6e-235|oeu:111383563|K12356 coniferyl-alcohol glucosyltransferase [EC:2.4.1.111] | (RefSeq) anthocyanidin 3-O-glucosyltransferase 5-like","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta OX=3983 GN=GT5 PE=2 SV=1","Glycosyltransferase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005593mg PE=3 SV=1","--","--","anthocyanidin 3-O-glucosyltransferase 5-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Phenylpropanoid biosynthesis (ko00940)"]
["c96350.graph_c0",16878,280.2,17503,274.66,16352,280,2006,34.08,1830,35.74,1986,33.75,0,-3.443567146,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: protein disulfide isomerase activity (GO:0003756);; Biological Process: cell redox homeostasis (GO:0045454);; ","K09580|4.7e-151|oeu:111397050|K09580 protein disulfide-isomerase A1 [EC:5.3.4.1] | (RefSeq) protein disulfide-isomerase-like","[O]","Posttranslational modification, protein turnover, chaperones ","Thioredoxin;; Thioredoxin-like domain;; Thioredoxin-like domain;; ERp29, N-terminal domain;; Calsequestrin;; Seed dormancy control;; Thioredoxin;; Thioredoxin-like domain","Protein disulfide-isomerase OS=Datisca glomerata OX=34297 GN=PDI PE=2 SV=1","Protein disulfide-isomerase OS=Dorcoceras hygrometricum OX=472368 GN=F511_20103 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protein disulfide-isomerase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","Protein processing in endoplasmic reticulum (ko04141)"]
["c111560.graph_c0",2279,61.14,2479,61.14,2281,62.96,7609,185.45,6600,185.47,7688,189.21,3.83e-145,1.312341353,"up","--","--","--","--","--","--","Protein of unknown function (DUF642)","--","uncharacterized protein LOC107814272 OS=Nicotiana tabacum OX=4097 GN=LOC107814272 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111405172 [Olea europaea var. sylvestris]","--","--"]
["c103720.graph_c0",32,2.89,14,1.32,16,1.64,101,5.55,138,8.87,137,7.31,1.92e-12,2.219192517,"up","--","--","Biological Process: male meiosis II (GO:0007142);; ","K02916|8.3e-07|han:110904471|K02916 large subunit ribosomal protein L35 | (RefSeq) uncharacterized protein LOC110904471 isoform X1","--","--","--","Protein JASON OS=Arabidopsis thaliana OX=3702 GN=JASON PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20524 PE=4 SV=1","--","--","uncharacterized protein LOC111396757 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)","Ribosome (ko03010)"]
["c117989.graph_c1",248,4.19,266,4.27,208,3.63,132,2.28,101,2,158,2.72,4.91e-13,-1.202956708,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K00284|2.4e-219|oeu:111379166|K00284 glutamate synthase (ferredoxin) [EC:1.4.7.1] | (RefSeq) ferredoxin-dependent glutamate synthase, chloroplastic-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; Reverse transcriptase (RNA-dependent DNA polymerase);; Integrase core domain","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_000541 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein C1H46_000541 [Malus baccata]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910)"]
["c111102.graph_c0",1956,71.33,2174,72.15,1870,69.45,316,10.98,280,10.29,370,12.55,1.32e-286,-2.953729187,"down","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: carbohydrate binding (GO:0030246);; ","--","--","--","--","--","Putative L-type lectin-domain containing receptor kinase S.7 OS=Davidia involucrata OX=16924 GN=Din_043693 PE=3 SV=1","T","Signal transduction mechanisms","probable L-type lectin-domain containing receptor kinase S.7 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100985.graph_c0",59,3.88,53,3.28,38,2.44,12,0.82,13,1.05,7,0.49,3.53e-09,-2.418189671,"down","--","--","--","K23050|4.8e-124|oeu:111365318|K23050 phenylcoumaran benzylic ether reductase [EC:1.3.1.-] | (RefSeq) isoeugenol synthase 1-like","--","--","NmrA-like family;; NAD(P)H-binding","Isoeugenol synthase 1 OS=Petunia hybrida OX=4102 GN=IGS1 PE=1 SV=1","NmrA domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G123700 PE=3 SV=1","S","Function unknown","isoeugenol synthase 1-like [Olea europaea var. sylvestris]","--","--"]
["c107335.graph_c0",1300,53.41,1365,52.86,1200,51.55,649,30.18,573,31.04,714,32.72,9.38e-67,-1.319580465,"down","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Molecular Function: peptidase activity (GO:0008233);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ubiquitin protein ligase binding (GO:0031625);; ","K23341|4.7e-111|oeu:111406166|K23341 erlin | (RefSeq) erlin-1 isoform X1","[R]","General function prediction only ","SPFH domain / Band 7 family","--","Prohibitin-related membrane protease subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15940 PE=3 SV=1","S","Function unknown","erlin-1 isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c110400.graph_c0",43,3.93,78,6.99,46,3.81,24,2.94,16,1.65,22,2.72,3.09e-06,-1.686730013,"down","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K12603|5.4e-20|sind:105159657|K12603 CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4] | (RefSeq) carbon catabolite repressor protein 4 homolog 1","[K]","Transcription ","--","Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CCR4-1 PE=2 SV=1","Glucose-repressible alcohol dehydrogenasetranscriptional effector OS=Striga asiatica OX=4170 GN=STAS_01536 PE=3 SV=1","K","Transcription","glucose-repressible alcohol dehydrogenasetranscriptional effector [Striga asiatica]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","RNA degradation (ko03018)"]
["c103361.graph_c0",907,49.41,1007,52.06,872,49.05,293,16.32,256,16.33,300,16.37,5.15e-102,-2.032002827,"down","--","--","Biological Process: signal transduction (GO:0007165);; ","--","--","--","Tify domain binding domain","Ninja-family protein AFP3 OS=Arabidopsis thaliana OX=3702 GN=AFP3 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00039679001 PE=3 SV=1","S","Function unknown","ninja-family protein AFP3-like isoform X1 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c97396.graph_c0",2569,543.06,1105,218.08,1032,222.63,670,145.99,396,99.02,502,108.69,0.000100975,-1.800526833,"down","--","--","--","--","--","--","Rapid ALkalinization Factor (RALF)","--","--","--","--","--","--","--"]
["c109272.graph_c0",129,8.94,129,8.44,124,8.84,67,4.75,71,5.77,98,6.91,2.33e-06,-1.010052418,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111895.graph_c0",47603,4015.83,44414,3532.62,38349,3324,16676,1489.31,15625,1601.75,16918,1504.08,1.26e-203,-1.723500127,"down","--","--","Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","Non-specific lipid-transfer protein Lac s 1 OS=Lactuca sativa OX=4236 GN=LSAT_1X82001 PE=1 SV=1","Non-specific lipid-transfer protein OS=Olea europaea subsp. europaea OX=158383 GN=LTP1 PE=2 SV=1","T","Signal transduction mechanisms","non-specific lipid-transfer protein 1-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c47691.graph_c0",42,2.26,40,2.04,34,1.89,0,0,0,0,1,0.05,9.3e-13,-5.2889684,"down","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09419|3.6e-90|oeu:111383113|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat stress transcription factor A-6b-like","[K]","Transcription ","--","Heat stress transcription factor A-6b OS=Arabidopsis thaliana OX=3702 GN=HSFA6b PE=2 SV=1","DNA binding protein, putative isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_004275 PE=3 SV=1","K","Transcription","heat stress transcription factor A-6b-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217);; molecular function: binding (GO:0005488)","--"]
["c87242.graph_c0",57,3.94,84,5.63,86,5.84,54,3.64,38,3.03,31,2.22,0.000120313,-1.175093465,"down","--","--","--","--","--","--","Domain of unknown function (DUF1995)","--","DUF1995 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_02s0033g00230 PE=4 SV=1","S","Function unknown","protein LOW PSII ACCUMULATION 3, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c112740.graph_c0",1351,54.6,1342,53.26,1254,53.49,720,31.36,762,36.94,741,30.15,1.88e-44,-1.145191234,"down","--","--","--","K13110|3.0e-187|oeu:111406202|K13110 microfibrillar-associated protein 1 | (RefSeq) microfibrillar-associated protein 1-like","[Z]","Cytoskeleton ","Microfibril-associated/Pre-mRNA processing","--","MFAP1 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_015760 PE=4 SV=1","Z","Cytoskeleton","microfibrillar-associated protein 1-like [Olea europaea var. sylvestris]","--","--"]
["c106813.graph_c1",200,9.15,174,7.61,189,9.57,85,4,84,4.66,96,4.67,2.73e-14,-1.399795695,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of translation (GO:0006417);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to blue light (GO:0009637);; Biological Process: response to salt stress (GO:0009651);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: leaf morphogenesis (GO:0009965);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: posttranscriptional regulation of gene expression (GO:0010608);; Biological Process: positive regulation of gene expression (GO:0010628);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: negative regulation of translation (GO:0017148);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: negative regulation of cellular protein metabolic process (GO:0032269);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: regulation of cellular amide metabolic process (GO:0034248);; Biological Process: negative regulation of cellular amide metabolic process (GO:0034249);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: positive regulation of nucleobase-containing compound metabolic process (GO:0045935);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: leaf development (GO:0048366);; Biological Process: shoot system development (GO:0048367);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: system development (GO:0048731);; Biological Process: phyllome development (GO:0048827);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: negative regulation of protein metabolic process (GO:0051248);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: positive regulation of RNA metabolic process (GO:0051254);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: plant organ development (GO:0099402);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: positive regulation of RNA biosynthetic process (GO:1902680);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: positive regulation of nucleic acid-templated transcription (GO:1903508);; Biological Process: plant organ morphogenesis (GO:1905392);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: negative regulation of cellular macromolecule biosynthetic process (GO:2000113);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K09338|2.7e-51|vvi:100241577|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HAT5","[K]","Transcription ","Homeobox associated leucine zipper;; Homeodomain","Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana OX=3702 GN=HAT7 PE=2 SV=4","Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033727 PE=4 SV=1","K","Transcription","homeobox-leucine zipper protein ATHB-54-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)","--"]
["c101423.graph_c0",6,0.3,8,0.43,7,0.36,46,2.36,28,1.64,38,1.94,7.34e-05,1.946688973,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113439.graph_c0",89,1.85,122,2.44,115,2.55,274,5.97,270,6.61,331,7.19,9.86e-11,1.090710761,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|4.4e-65|aly:9302920|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) protein BRASSINOSTEROID INSENSITIVE 1","--","--","Leucine rich repeat;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine Rich repeats (2 copies);; Leucine Rich repeat;; Leucine Rich Repeat","Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana OX=3702 GN=At2g24230 PE=1 SV=1","probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Nicotiana tabacum OX=4097 GN=LOC107808304 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c114759.graph_c0",5,0.15,2,0.06,1,0.03,31,0.96,71,2.52,82,2.53,3.04e-11,3.775061344,"up","--","--","Molecular Function: kinase activity (GO:0016301);; ","--","[R]","General function prediction only ","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","--","Lrr receptor-like serinethreonine-protein kinase gso1 OS=Nicotiana attenuata OX=49451 GN=GSO1_4 PE=4 SV=1","S","Function unknown","DNA damage-repair/toleration protein DRT100 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c91931.graph_c0",332,30.72,94,7.73,65,5.86,53,5.18,31,3.04,37,3.75,0.002900992,-2.027445147,"down","--","--","Biological Process: regulation of DNA endoreduplication (GO:0032875);; ","--","--","--","Plant invertase/pectin methylesterase inhibitor","Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_004907 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111407062 [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007)","--"]
["c104874.graph_c0",3,0.17,7,0.38,0,0,18,1.18,24,1.96,47,3.43,9.64e-05,2.486218125,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Biological Process: carbohydrate transport (GO:0008643);; Cellular Component: integral component of membrane (GO:0016021);; ","K15382|9.0e-83|oeu:111383375|K15382 solute carrier family 50 (sugar transporter) | (RefSeq) bidirectional sugar transporter NEC1-like","[R]","General function prediction only ","Sugar efflux transporter for intercellular exchange","Bidirectional sugar transporter NEC1 OS=Petunia hybrida OX=4102 GN=NEC1 PE=2 SV=1","Bidirectional sugar transporter SWEET OS=Camellia sinensis OX=4442 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","SWEET9a [Camellia sinensis]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425)","--"]
["c94317.graph_c0",2799,225.54,3191,243.14,2793,232.45,278,15.19,293,17.8,300,15.69,0,-3.647959936,"down","--","--","Molecular Function: alpha-L-fucosidase activity (GO:0004560);; Biological Process: metabolic process (GO:0008152);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K01206|3.1e-137|thj:104825554|K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) alpha-L-fucosidase 3","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana OX=3702 GN=At3g26430 PE=2 SV=1","Alpha-L-fucosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04343 PE=3 SV=1","S","Function unknown","GDSL esterase/lipase At3g26430-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Other glycan degradation (ko00511)"]
["c87927.graph_c0",22,1.73,54,4.01,50,4.05,121,9.75,117,10.8,121,9.69,4.53e-05,1.16397745,"up","--","--","Biological Process: protein transport (GO:0015031);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: vesicle-mediated transport (GO:0016192);; ","--","[U]","Intracellular trafficking, secretion, and vesicular transport ","Got1/Sft2-like family","--","Vesicle transport protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_040428 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","protein transport protein SFT2-like [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98335.graph_c1",139,12.36,97,7.81,68,6.21,687,64.8,790,86.46,852,81.04,1.83e-20,2.566499544,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|1.4e-50|oeu:111367160|K20628 expansin | (RefSeq) expansin-A15-like","--","--","Expansin C-terminal domain","Expansin-A10 OS=Arabidopsis thaliana OX=3702 GN=EXPA10 PE=2 SV=1","Expansin OS=Nelumbo nucifera OX=4432 GN=EXPA1 PE=2 SV=1","S","Function unknown","expansin-A15-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c117356.graph_c0",131,1.3,145,1.36,94,0.96,35,0.52,38,0.45,46,0.47,1.31e-14,-1.921317543,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP binding (GO:0005524);; Biological Process: DNA integration (GO:0015074);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K12447|1.9e-128|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Integrase core domain;; gag-polypeptide of LTR copia-type;; Retrotransposon gag protein;; gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33057 PE=4 SV=1","L","Replication, recombination and repair","RmlC-like cupins superfamily protein [Prunus dulcis]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c93002.graph_c0",79,4.76,97,5.54,66,4.09,295,18.18,269,18.99,310,19,1.19e-18,1.520245758,"up","--","--","--","K15082|2.0e-71|cic:CICLE_v10010155mg|K15082 DNA repair protein RAD7 | (RefSeq) hypothetical protein","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18195 PE=4 SV=1","--","--","uncharacterized protein LOC111373549 [Olea europaea var. sylvestris]","--","--"]
["c111860.graph_c0",1207,37.52,1151,30.77,1080,30.4,3920,187.72,3610,198.1,3755,177.52,1.18e-99,1.392447767,"up","--","--","Molecular Function: calmodulin binding (GO:0005516);; ","K00679|8.5e-35|cic:CICLE_v10027727mg|K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] | (RefSeq) hypothetical protein","--","--","Plant calmodulin-binding domain;; GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase APG OS=Arabidopsis thaliana OX=3702 GN=APG PE=2 SV=1","CaM_binding domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_001528 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111381248 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Glycerolipid metabolism (ko00561)"]
["c103339.graph_c0",11727,467.24,12687,478.92,11504,453.04,5756,226.12,4597,206.35,5139,196.47,1.71e-148,-1.534588432,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: phosphoglycerate kinase activity (GO:0004618);; Molecular Function: ATP binding (GO:0005524);; Biological Process: glycolytic process (GO:0006096);; ","K00927|3.8e-256|oeu:111368568|K00927 phosphoglycerate kinase [EC:2.7.2.3] | (RefSeq) phosphoglycerate kinase, chloroplastic","[G]","Carbohydrate transport and metabolism ","Phosphoglycerate kinase","Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Phosphoglycerate kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22523 PE=3 SV=1","G","Carbohydrate transport and metabolism","phosphoglycerate kinase, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)","Glycolysis / Gluconeogenesis (ko00010);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c97664.graph_c0",470,27.8,581,32.46,505,30.76,33,2,0,0,1,0.06,0.005716989,-2.765449952,"down","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13459|7.6e-18|jcu:105635047|K13459 disease resistance protein RPS2 | (RefSeq) probable disease resistance protein At1g12280 isoform X1","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1","Putative receptor-like protein kinase OS=Morus notabilis OX=981085 GN=L484_014036 PE=4 SV=1","T","Signal transduction mechanisms","rust resistance kinase Lr10-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant-pathogen interaction (ko04626)"]
["c111586.graph_c1",10,0.44,7,0.3,9,0.4,45,1.88,30,1.48,35,1.52,0.00052997,1.645369143,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K14510|2.1e-37|mcha:111013655|K14510 serine/threonine-protein kinase CTR1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase CTR1","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1","Protein kinase domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_034120 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111389500 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c93965.graph_c0",48213,2825.84,51575,2854.46,48294,2918.82,32491,1881.25,25621,1695.98,28883,1658.57,1.05e-76,-1.09029062,"down","--","--","--","--","--","--","--","Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP13 PE=1 SV=2","PAP_fibrillin domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010546mg PE=4 SV=1","S","Function unknown","probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c111809.graph_c1",46,5.64,23,1.57,23,1.59,134,13.78,96,9.07,91,7.93,3.77e-06,1.444211966,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; ","K14500|1.8e-12|pop:7464924|K14500 BR-signaling kinase [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase BSK3","--","--","Alba","Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1","Alba domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015883mg PE=4 SV=1","S","Function unknown","uncharacterized protein At2g34160-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Plant hormone signal transduction (ko04075)"]
["c36190.graph_c0",286,23.7,298,23.29,274,23.33,14,1.19,12,1.17,16,1.38,1.67e-70,-4.586476656,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11499 PE=4 SV=1","--","--","uncharacterized protein LOC111403606 [Olea europaea var. sylvestris]","--","--"]
["c88931.graph_c0",0,0,0,0,0,0,110,7.26,107,6.94,131,8.58,1.68e-18,6.571397931,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: carbohydrate binding (GO:0030246);; ","K03188|4.1e-11|dcr:108224146|K03188 urease accessory protein | (RefSeq) uncharacterized protein LOC108224146 isoform X1","--","--","F-box domain;; Phloem protein 2","F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2","F-box domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_042792 PE=4 SV=1","S","Function unknown","F-box protein PP2-B15-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c115663.graph_c0",31,1.7,32,1.58,22,1.8,9,0.65,10,0.91,7,0.59,9.97e-05,-1.887988908,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c88547.graph_c0",214,43.67,234,44.67,201,41.83,574,120.1,639,153.41,754,156.35,3.31e-25,1.27205896,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Molecular Function: proton-exporting ATPase activity, phosphorylative mechanism (GO:0008553);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: proton export across plasma membrane (GO:0120029);; ","K01535|1.1e-87|oeu:111402201|K01535 H+-transporting ATPase [EC:7.1.2.1] | (RefSeq) plasma membrane ATPase 4","[P]","Inorganic ion transport and metabolism ","haloacid dehalogenase-like hydrolase","Plasma membrane ATPase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0656100 PE=2 SV=1","Plasma membrane ATPase OS=Coffea canephora OX=49390 GN=GSCOC_T00041452001 PE=3 SV=1","P","Inorganic ion transport and metabolism","plasma membrane ATPase 4 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425)","Oxidative phosphorylation (ko00190)"]
["c110297.graph_c0",7,0.27,3,0.09,8,0.37,32,1.09,53,2.72,49,2.24,1.56e-06,2.39093947,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.7e-167|ccaj:109804582|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 5.2-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1","Protein NRT1/ PTR FAMILY 5.2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08764 PE=3 SV=1","E","Amino acid transport and metabolism","PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Ipomoea nil]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c107000.graph_c1",17383,999.07,19127,1038.92,17460,1032.79,3453,203.51,2840,191.26,3103,181.59,0,-2.841768777,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Molecular Function: ferrous iron binding (GO:0008198);; Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: stizolobate synthase activity (GO:0050297);; ","K15777|1.4e-52|oeu:111394815|K15777 4,5-DOPA dioxygenase extradiol [EC:1.13.11.-] | (RefSeq) extradiol ring-cleavage dioxygenase-like","--","--","Catalytic LigB subunit of aromatic ring-opening dioxygenase","4,5-DOPA dioxygenase extradiol OS=Beta vulgaris OX=161934 GN=DODA PE=1 SV=1","Stizolobate synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24864 PE=3 SV=1","S","Function unknown","extradiol ring-cleavage dioxygenase-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699)","Betalain biosynthesis (ko00965)"]
["c78451.graph_c0",19,1.08,10,0.56,9,0.55,46,2.81,94,6.59,77,4.68,2.57e-07,2.103131297,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K05278|7.3e-145|oeu:111397470|K05278 flavonol synthase [EC:1.14.20.6] | (RefSeq) flavonol synthase/flavanone 3-hydroxylase-like","[QR]","--","non-haem dioxygenase in morphine synthesis N-terminal;; 2OG-Fe(II) oxygenase superfamily","Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida OX=4102 GN=FL PE=2 SV=1","Flavonol synthase OS=Antirrhinum majus OX=4151 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","flavonol synthase [Osmanthus fragrans]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Flavonoid biosynthesis (ko00941)"]
["c109516.graph_c0",111,2.48,113,2.38,85,1.96,318,7.6,225,5.89,281,6.6,7.17e-10,1.082518196,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein of unknown function (DUF3754)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05240 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105167185 isoform X1 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c84961.graph_c0",77,15.06,130,23.96,85,16.97,21,4.21,30,6.9,43,8.55,2.01e-10,-1.908062038,"down","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleocytoplasmic transport (GO:0006913);; Biological Process: protein transport (GO:0015031);; ","K07936|6.5e-48|adu:107463291|K07936 GTP-binding nuclear protein Ran | (RefSeq) GTP-binding nuclear protein Ran-3","[U]","Intracellular trafficking, secretion, and vesicular transport ","Ras family;; Ras of Complex, Roc, domain of DAPkinase;; ADP-ribosylation factor family","GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2","GTP-binding nuclear protein OS=Picea sitchensis OX=3332 PE=2 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","unknown [Picea sitchensis]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179)","Ribosome biogenesis in eukaryotes (ko03008);; RNA transport (ko03013)"]
["c112958.graph_c1",86,3.7,101,3.77,98,4.2,27,1.17,38,1.82,40,1.67,1.72e-10,-1.727387899,"down","--","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20043|1.5e-13|gab:108451730|K20043 clathrin coat assembly protein AP180 | (RefSeq) putative clathrin assembly protein At5g35200","[R]","General function prediction only ","--","Cytochrome P450 72A225 OS=Catharanthus roseus OX=4058 GN=CYP72A225 PE=2 SV=1","Cytochrome P450 OS=Scoparia dulcis OX=107240 PE=2 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111400210 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c117763.graph_c0",7,0.22,1,0.03,4,0.13,166,7.06,170,9.53,192,9.11,5.84e-31,4.855131231,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","--","--","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_034340 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein VITISV_034340 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c99049.graph_c1",5222,220.32,5754,229.94,5506,237.46,3243,185.38,3029,197.76,3587,205.43,4.88e-85,-1.065536464,"down","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: mitotic cell cycle (GO:0000278);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","K07374|2.0e-232|egu:105054774|K07374 tubulin alpha | (RefSeq) tubulin alpha-3 chain","[Z]","Cytoskeleton ","Tubulin/FtsZ family, GTPase domain;; Tubulin C-terminal domain;; Tubulin/FtsZ family, GTPase domain","Tubulin alpha-6 chain OS=Zea mays OX=4577 GN=TUBA6 PE=2 SV=1","Tubulin alpha chain OS=Phoenix dactylifera OX=42345 GN=LOC103723819 PE=3 SV=1","Z","Cytoskeleton","tubulin alpha-3 chain [Elaeis guineensis]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: supramolecular complex (GO:0099080)","Phagosome (ko04145)"]
["c112850.graph_c0",3696,52.89,3776,50.5,3537,52.6,2354,34.21,2067,34.37,2286,33.9,2.11e-78,-1.036918992,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","K14515|5.1e-251|oeu:111407932|K14515 EIN3-binding F-box protein | (RefSeq) EIN3-binding F-box protein 1-like isoform X1","[R]","General function prediction only ","Leucine Rich repeat;; Leucine Rich repeats (2 copies);; F-box-like","EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1","Ein3-binding f-box protein 1 OS=Nicotiana attenuata OX=49451 GN=EBF1_0 PE=4 SV=1","S","Function unknown","EIN3-binding F-box protein 1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c109732.graph_c0",7702,223,8268,233.38,7449,225.51,3753,122.88,3200,118.83,3921,128.51,2.46e-191,-1.430777611,"down","[D]","Cell cycle control, cell division, chromosome partitioning ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; ","--","--","--","NTPase;; AAA domain;; ATPase family associated with various cellular activities (AAA);; AAA domain;; AAA domain (dynein-related subfamily);; Magnesium chelatase, subunit ChlI","Protein SEEDLING PLASTID DEVELOPMENT 1 OS=Arabidopsis thaliana OX=3702 GN=SPD1 PE=2 SV=1","AAA domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_036217 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein ycf45 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c89156.graph_c0",10,0.61,15,0.88,15,0.95,41,2.62,47,3.38,61,3.79,0.000226964,1.500327171,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14520 PE=4 SV=1","--","--","uncharacterized protein LOC111383381 [Olea europaea var. sylvestris]","--","--"]
["c110214.graph_c0",84,2.13,99,2.44,75,1.81,295,8.08,306,9.85,325,8.78,1.34e-19,1.51345114,"up","--","--","--","--","--","--","Tify domain binding domain","--","Jas domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06696 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375125 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c113613.graph_c1",69,2.21,44,1.35,51,1.71,142,4.24,144,4.89,187,5.83,4.11e-07,1.18224761,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021063 PE=4 SV=1","--","--","uncharacterized protein LOC111393335 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c116240.graph_c0",444,10.83,503,12.25,455,12.8,68,1.35,81,2.63,94,1.77,3.86e-81,-2.833717548,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K03006|2.6e-168|adu:107466525|K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; gag-polypeptide of LTR copia-type;; Integrase core domain;; GAG-pre-integrase domain;; Zinc knuckle","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2258 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","RNA polymerase (ko03020)"]
["c79171.graph_c0",6,0.7,4,0.44,4,0.48,40,4.76,52,7.09,60,7.09,5.17e-09,2.893166984,"up","--","--","--","--","--","--","--","--","--","--","--","classical arabinogalactan protein 9-like [Olea europaea var. sylvestris]","--","--"]
["c90691.graph_c1",1,0.07,1,0.05,0,0,151,9.23,136,9.38,153,9.24,9.45e-23,6.190858596,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-transporter N-terminal;; ABC transporter","Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia OX=4092 GN=PDR2 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00029585001 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","pleiotropic drug resistance protein 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c80769.graph_c0",6,2.56,6,2.36,8,3.43,31,13.57,46,23.19,47,20.72,9.09e-06,2.156458284,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02875|3.4e-45|egu:105033615|K02875 large subunit ribosomal protein L14e | (RefSeq) uncharacterized protein LOC105033615","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L14","Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1","Ribosomal_L14e domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_018575 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","hypothetical protein DVH24_018575 [Malus domestica]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c107888.graph_c0",36,2.05,37,1.96,36,2.01,396,24.42,371,22.07,375,19.09,1.36e-55,3.03670092,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13430|2.2e-43|han:110926326|K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Probable receptor-like protein kinase At1g80640 OS=Arabidopsis thaliana OX=3702 GN=At1g80640 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27419 PE=4 SV=1","T","Signal transduction mechanisms","probable receptor-like protein kinase At1g80640 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant-pathogen interaction (ko04626)"]
["c100092.graph_c0",118,6.06,145,6.92,136,6.89,58,3.53,80,5.21,48,2.42,1.04e-08,-1.3876451,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K06892|1.1e-103|oeu:111401066|K06892 feruloyl-CoA 6-hydroxylase [EC:1.14.11.61] | (RefSeq) feruloyl CoA ortho-hydroxylase 2-like","[QR]","--","2OG-Fe(II) oxygenase superfamily;; Ubiquitin-conjugating enzyme","Feruloyl CoA ortho-hydroxylase F6H1-1 OS=Ipomoea batatas OX=4120 GN=F6H1-1 PE=2 SV=1","F6'H1 OS=Nicotiana attenuata OX=49451 GN=F6'H2_3 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","feruloyl CoA ortho-hydroxylase 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c95640.graph_c0",0,0,1,0.03,3,0.1,16,0.56,16,0.64,20,0.69,0.000345725,2.71145509,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K15639|1.5e-127|mesc:110631173|K15639 PHYB activation tagged suppressor 1 [EC:1.14.-.-] | (RefSeq) cytochrome P450 734A1-like","[QI]","--","Cytochrome P450","Cytochrome P450 734A1 OS=Arabidopsis thaliana OX=3702 GN=CYP734A1 PE=2 SV=1","Cytochrome P450 CYP4/CYP19/CYP26 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14927 PE=3 SV=1","--","--","cytochrome P450 734A1 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Brassinosteroid biosynthesis (ko00905)"]
["c97106.graph_c0",8,0.69,5,0.4,4,0.35,17,1.49,22,2.22,29,2.53,0.00966898,1.517678279,"up","--","--","Molecular Function: copper ion transmembrane transporter activity (GO:0005375);; Biological Process: cellular copper ion homeostasis (GO:0006878);; Cellular Component: integral component of membrane (GO:0016021);; ","K14686|4.5e-44|oeu:111365808|K14686 solute carrier family 31 (copper transporter), member 1 | (RefSeq) copper transporter 6-like","[P]","Inorganic ion transport and metabolism ","Ctr copper transporter family","Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1","Copper transporter OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_020504 PE=3 SV=1","P","Inorganic ion transport and metabolism","copper transporter 6-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105756.graph_c0",59,3.03,43,2.06,58,3.07,30,1.65,33,2.06,25,1.29,0.000704139,-1.147496803,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: cysteine-type endopeptidase activity (GO:0004197);; Cellular Component: vacuole (GO:0005773);; Biological Process: vacuolar protein processing (GO:0006624);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; ","K01369|1.1e-155|oeu:111393200|K01369 legumain [EC:3.4.22.34] | (RefSeq) vacuolar-processing enzyme","[O]","Posttranslational modification, protein turnover, chaperones ","Peptidase C13 family;; Caspase domain","Vacuolar-processing enzyme OS=Glycine max OX=3847 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a018579mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","vacuolar-processing enzyme [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","--"]
["c88615.graph_c0",31,3.09,69,6.42,63,6.41,9,3.25,11,1.3,37,3.87,6.75e-05,-1.766085331,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02991|1.0e-71|gsl:Gasu_34220|K02991 small subunit ribosomal protein S6e | (RefSeq) 40S ribosomal protein S6e","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S6e","40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1","40S ribosomal protein S6 OS=Anthurium amnicola OX=1678845 GN=RpS6 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","ribosomal protein S6e [Piromyces finnis]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c81225.graph_c0",5,1.06,3,0.59,2,0.43,84,18.24,95,23.67,109,23.46,1.01e-18,4.207372685,"up","[TK]","--","Molecular Function: GTP diphosphokinase activity (GO:0008728);; Biological Process: guanosine tetraphosphate metabolic process (GO:0015969);; Molecular Function: kinase activity (GO:0016301);; ","K00951|4.2e-73|oeu:111375999|K00951 GTP pyrophosphokinase [EC:2.7.6.5] | (RefSeq) putative GTP diphosphokinase RSH1, chloroplastic","[T]","Signal transduction mechanisms ","TGS domain","Putative GTP diphosphokinase RSH1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RSH1 PE=1 SV=1","GTP diphosphokinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18663 PE=3 SV=1","T","Signal transduction mechanisms","putative GTP diphosphokinase RSH1, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Purine metabolism (ko00230)"]
["c109621.graph_c1",167,9.25,152,8.09,125,8.79,87,5.15,70,5.09,63,4.46,8.45e-10,-1.313935668,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11867 PE=4 SV=1","--","--","hypothetical protein CDL12_11867 [Handroanthus impetiginosus]","--","--"]
["c107910.graph_c3",62,13.74,103,20.64,80,17.83,27,2.31,12,1.08,19,1.81,2.76e-12,-2.330389679,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103335.graph_c0",1533,219.01,1703,228.87,1588,234.86,810,95.07,724,99.04,918,105.24,3.65e-69,-1.300311522,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Biological Process: cell-cell signaling (GO:0007267);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: signaling (GO:0023052);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: carboxylic acid binding (GO:0031406);; Molecular Function: monocarboxylic acid binding (GO:0033293);; Molecular Function: small molecule binding (GO:0036094);; Molecular Function: ion binding (GO:0043167);; Molecular Function: anion binding (GO:0043168);; Molecular Function: organic acid binding (GO:0043177);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: monosaccharide binding (GO:0048029);; Molecular Function: galacturonate binding (GO:0048032);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","Remorin, N-terminal region","Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13913 PE=3 SV=1","S","Function unknown","remorin-like isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699)","--"]
["c37891.graph_c0",38,13.19,48,15.44,54,18.94,32,11.4,18,7.37,26,9.32,0.00119123,-1.172229751,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108632.graph_c0",66,3.73,11,0.59,5,0.31,182,9.65,252,15.44,278,14.94,0.009063384,2.180092402,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","K16292|8.6e-199|oeu:111401715|K16292 KDEL-tailed cysteine endopeptidase [EC:3.4.22.-] | (RefSeq) vignain-like","[O]","Posttranslational modification, protein turnover, chaperones ","Papain family cysteine protease;; Cathepsin propeptide inhibitor domain (I29)","Vignain OS=Ricinus communis OX=3988 GN=CYSEP PE=1 SV=1","Cysteine proteinase Cathepsin L OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00198 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","vignain-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c84027.graph_c0",22,3.31,19,2.9,13,2.01,65,11.24,52,10.03,63,10.55,0.00015543,1.366074508,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K00558|7.6e-07|mdm:103452459|K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] | (RefSeq) DNA (cytosine-5)-methyltransferase CMT3","--","--","--","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00024989001 PE=4 SV=1","--","--","uncharacterized protein LOC111391615 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Cysteine and methionine metabolism (ko00270)"]
["c112482.graph_c0",383,18.38,376,16.96,370,18.24,1223,51.65,1163,55.6,1259,50.97,1.56e-54,1.365544578,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|3.7e-227|nta:107786509|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor-like protein kinase HSL1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26621 PE=3 SV=1","T","Signal transduction mechanisms","receptor-like protein kinase HSL1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c96052.graph_c0",15,0.51,13,0.44,6,0.24,437,16.13,364,15.44,427,15.41,4.11e-67,4.745935727,"up","[E]","Amino acid transport and metabolism ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: L-tyrosine:2-oxoglutarate aminotransferase activity (GO:0004838);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Biological Process: tyrosine metabolic process (GO:0006570);; Biological Process: tyrosine catabolic process (GO:0006572);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: transaminase activity (GO:0008483);; Biological Process: catabolic process (GO:0009056);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: cellular amino acid catabolic process (GO:0009063);; Biological Process: aromatic amino acid family metabolic process (GO:0009072);; Biological Process: aromatic amino acid family catabolic process (GO:0009074);; Biological Process: cellular process (GO:0009987);; Biological Process: organic acid catabolic process (GO:0016054);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring nitrogenous groups (GO:0016769);; Biological Process: aromatic compound catabolic process (GO:0019439);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule catabolic process (GO:0044282);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid catabolic process (GO:0046395);; Molecular Function: L-tyrosine aminotransferase activity (GO:0070547);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound catabolic process (GO:1901361);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: alpha-amino acid metabolic process (GO:1901605);; Biological Process: alpha-amino acid catabolic process (GO:1901606);; ","K00815|1.7e-158|oeu:111367454|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) tyrosine aminotransferase-like","[E]","Amino acid transport and metabolism ","Aminotransferase class I and II;; Beta-eliminating lyase;; Aminotransferase class I and II","Nicotianamine aminotransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAAT1 PE=1 SV=1","Probable aminotransferase OS=Olea europaea OX=4146 PE=2 SV=1","E","Amino acid transport and metabolism","probable aminotransferase [Olea europaea]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)"]
["c97651.graph_c0",15,0.81,18,0.89,9,0.5,45,2.19,61,3.49,60,2.99,5.34e-05,1.6006335,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25729 PE=4 SV=1","--","--","uncharacterized protein LOC111401680 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c89546.graph_c0",28,1.79,28,1.69,26,1.71,0,0,0,0,0,0,1.84e-10,-5.252826754,"down","--","--","Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K16280|1.1e-29|csat:104750588|K16280 E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RGLG2-like isoform X1","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana OX=3702 GN=At5g03610 PE=2 SV=1","Lipase_GDSL domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025845 PE=3 SV=1","S","Function unknown","hypothetical protein F0562_025845 [Nyssa sinensis]","molecular function: catalytic activity (GO:0003824)","--"]
["c110299.graph_c0",3,0.84,1,0.03,0,0,42,1.29,33,1.16,44,1.34,2.97e-09,3.888249704,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114193.graph_c0",2502,92.78,2563,89.72,2229,85.54,745,29.48,581,26.49,675,26.92,3.6e-191,-2.185507918,"down","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K17604|1.7e-93|zju:107411697|K17604 zinc finger SWIM domain-containing protein 3 | (RefSeq) uncharacterized protein LOC107411697 isoform X1","--","--","MULE transposase domain;; SWIM zinc finger;; Transposase, Mutator family","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_006215 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375152 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c112962.graph_c1",88588,1599.89,98310,1682.17,91098,1698.75,46554,860.99,34674,733.28,41269,758.86,1.14e-119,-1.506216865,"down","[H]","Coenzyme transport and metabolism ","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: cytosol (GO:0005829);; Biological Process: thiamine biosynthetic process (GO:0009228);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: transferase activity, transferring pentosyl groups (GO:0016763);; Biological Process: thiazole biosynthetic process (GO:0052837);; ","K03146|3.1e-174|oeu:111383503|K03146 cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] | (RefSeq) thiamine thiazole synthase 1, chloroplastic-like","[R]","General function prediction only ","Thi4 family;; FAD dependent oxidoreductase;; FAD binding domain;; NAD(P)-binding Rossmann-like domain;; GMC oxidoreductase","Thiamine thiazole synthase 1, chloroplastic OS=Vitis vinifera OX=29760 GN=THI1-1 PE=3 SV=1","Thiamine thiazole synthase, chloroplastic OS=Davidia involucrata OX=16924 GN=THI1 PE=3 SV=1","H","Coenzyme transport and metabolism","thiamine thiazole synthase 1, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; molecular function: catalytic activity (GO:0003824)","Thiamine metabolism (ko00730)"]
["c84023.graph_c0",0,0,1,0.14,3,0.45,36,7.01,24,6.11,29,6.37,4.7e-07,3.466873982,"up","[TK]","--","Biological Process: guanosine tetraphosphate metabolic process (GO:0015969);; ","K00951|6.4e-34|oeu:111375967|K00951 GTP pyrophosphokinase [EC:2.7.6.5] | (RefSeq) putative GTP diphosphokinase RSH1, chloroplastic","[T]","Signal transduction mechanisms ","--","Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RSH1 PE=2 SV=1","GTP diphosphokinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_11056 PE=3 SV=1","T","Signal transduction mechanisms","putative GTP diphosphokinase RSH1, chloroplastic [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Purine metabolism (ko00230)"]
["c117979.graph_c2",12,0.71,11,0.49,11,0.67,33,1.01,43,1.54,43,1.3,0.001363766,1.411094976,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","Domain of unknown function (DUF4371)","--","TTF-type domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_021296 PE=4 SV=1","S","Function unknown","zinc finger MYM-type protein 1-like, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c82674.graph_c0",40,1.7,13,0.49,13,0.57,102,4.44,130,6.48,180,7.79,5.6e-11,2.239655991,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; ","K00430|2.6e-189|oeu:111395952|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 42-like","--","--","Peroxidase","Peroxidase 42 OS=Arabidopsis thaliana OX=3702 GN=PER42 PE=1 SV=2","Peroxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18844 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","peroxidase 42-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c107336.graph_c1",62,16.39,78,18.83,75,20.3,195,34.38,166,29.83,225,41.07,2.52e-08,1.106434478,"up","--","--","Cellular Component: proteasome complex (GO:0000502);; Biological Process: proteasome assembly (GO:0043248);; ","K11878|7.6e-46|nsy:104222110|K11878 proteasome assembly chaperone 4 | (RefSeq) proteasome assembly chaperone 4","[F]","Nucleotide transport and metabolism ","Proteasome assembly chaperone 4","--","proteasome assembly chaperone 4-like OS=Nicotiana tabacum OX=4097 GN=LOC107773607 PE=4 SV=1","F","Nucleotide transport and metabolism","PREDICTED: proteasome assembly chaperone 4 [Nicotiana sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c103685.graph_c0",404,14.65,475,18.3,417,15.81,195,6.73,230,9.83,208,8.1,3.09e-24,-1.343954194,"down","--","--","Molecular Function: thiol-dependent ubiquitin-specific protease activity (GO:0004843);; ","K13717|7.1e-144|oeu:111367881|K13717 OTU domain-containing protein 3 [EC:3.4.19.12] | (RefSeq) OTU domain-containing protein 3 isoform X1","[TO]","--","OTU-like cysteine protease;; Peptidase C65 Otubain;; SEC-C motif","OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 OS=Arabidopsis thaliana OX=3702 GN=OTU7 PE=1 SV=2","OTU domain-containing protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a021778mg PE=4 SV=1","--","--","OTU domain-containing protein 3 isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c107513.graph_c0",79,1.67,96,1.94,68,1.48,36,0.78,38,0.94,51,1.1,4.82e-06,-1.255295537,"down","--","--","--","K19525|1.8e-07|nnu:104609851|K19525 vacuolar protein sorting-associated protein 13A/C | (RefSeq) uncharacterized LOC104609851","--","--","Vacuolar protein sorting-associated protein 62","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_009802 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111393319 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c100023.graph_c1",134,9.44,199,10.07,185,8.42,91,5.39,70,5.09,76,4.3,7.27e-12,-1.434265332,"down","--","--","Molecular Function: purine nucleoside transmembrane transporter activity (GO:0015211);; Cellular Component: integral component of membrane (GO:0016021);; ","K03020|7.8e-29|oeu:111372726|K03020 DNA-directed RNA polymerases I and III subunit RPAC2 | (RefSeq) DNA-directed RNA polymerases I and III subunit RPAC2-like","--","--","Purine nucleobase transmembrane transport","Purine permease 21 OS=Arabidopsis thaliana OX=3702 GN=PUP21 PE=2 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008106mg PE=3 SV=1","S","Function unknown","purine permease 21-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","RNA polymerase (ko03020)"]
["c117365.graph_c1",50,1.71,85,2.75,53,1.88,8,0.27,8,0.31,6,0.31,1.38e-14,-3.232765097,"down","--","--","--","--","[T]","Signal transduction mechanisms ","--","Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1","Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g092899 PE=4 SV=1","--","--","hypothetical protein Ahy_B08g092899 [Arachis hypogaea]","--","--"]
["c74824.graph_c0",9,2.66,4,1.1,2,0.6,33,10.02,18,6.28,28,8.41,0.001579643,1.86528396,"up","--","--","Molecular Function: actin binding (GO:0003779);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: membrane (GO:0016020);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: cell periphery (GO:0071944);; ","--","--","--","--","--","Transcription factor/CCAAT displacement protein CDP1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22818 PE=4 SV=1","S","Function unknown","protein NETWORKED 1D-like, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","--"]
["c102402.graph_c0",18,0.7,19,0.7,23,0.92,83,3.71,71,3.71,82,3.31,7.75e-07,1.6021825,"up","[H]","Coenzyme transport and metabolism ","Biological Process: tRNA wobble uridine modification (GO:0002098);; Molecular Function: tRNA (uracil) methyltransferase activity (GO:0016300);; ","K10770|5.7e-200|oeu:111378936|K10770 alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229] | (RefSeq) alkylated DNA repair protein alkB homolog 8-like","[R]","General function prediction only ","Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methionine biosynthesis protein MetW","tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Arabidopsis thaliana OX=3702 GN=TRM9 PE=1 SV=1","Putative methyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18485 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","alkylated DNA repair protein alkB homolog 8-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","--"]
["c114281.graph_c0",93,2.29,104,2.55,73,1.88,42,2.4,33,2.43,38,2.15,8.39e-09,-1.545335804,"down","--","--","--","K23288|7.4e-21|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Pentatricopeptide repeat-containing protein mitochondrial-like (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g044917 PE=4 SV=1","L","Replication, recombination and repair","pentatricopeptide repeat-containing protein mitochondrial-like, partial [Trifolium pratense]","--","--"]
["c94224.graph_c0",150,17.79,132,14.73,92,11.19,59,7.17,70,9.75,91,10.98,6.55e-06,-1.070303787,"down","--","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; ","--","--","--","Plant invertase/pectin methylesterase inhibitor","Cell wall / vacuolar inhibitor of fructosidase 1 OS=Arabidopsis thaliana OX=3702 GN=C/VIF1 PE=1 SV=1","PMEI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04020 PE=4 SV=1","S","Function unknown","cell wall / vacuolar inhibitor of fructosidase 1-like [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c95230.graph_c1",4,0.31,4,0.29,5,0.4,18,1.43,30,2.76,27,2.13,0.000775774,1.989073169,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103683.graph_c0",47,1.84,75,2.82,65,2.61,239,9.32,180,8.02,222,8.66,5.05e-12,1.435121892,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=1","Transcription factor bHLH130 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30416 PE=4 SV=1","K","Transcription","transcription factor bHLH122-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c93227.graph_c0",13,1.08,4,0.31,6,0.51,24,2.03,52,5.05,53,4.46,7.72e-05,2.011089209,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1","LEA_2 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_11G112400 PE=4 SV=1","S","Function unknown","NDR1/HIN1-like protein 13 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c83421.graph_c0",3327,66.11,3423,64.41,3224,66.05,924,18.77,667,15.51,811,16.39,6.86e-218,-2.375965767,"down","[R]","General function prediction only ","Biological Process: defense response (GO:0006952);; Molecular Function: ADP binding (GO:0043531);; ","K13453|7.7e-110|nau:109235474|K13453 disease resistance protein | (RefSeq) putative late blight resistance protein homolog R1A-4","[T]","Signal transduction mechanisms ","NB-ARC domain;; Rx N-terminal domain","Putative late blight resistance protein homolog R1A-10 OS=Solanum demissum OX=50514 GN=R1A-10 PE=3 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001088mg PE=4 SV=1","T","Signal transduction mechanisms","putative late blight resistance protein homolog R1B-17 isoform X1 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c92624.graph_c0",1140,76.71,1208,77.84,1199,84.24,323,21.38,269,20.37,285,18.87,7.71e-133,-2.333736137,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Cellular Component: nucleolus (GO:0005730);; Biological Process: transcription, DNA-templated (GO:0006351);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: tRNA 3'-trailer cleavage (GO:0042779);; ","K03019|1.8e-35|oeu:111409935|K03019 DNA-directed RNA polymerase III subunit RPC11 | (RefSeq) DNA-directed RNA polymerase III subunit RPC10-like","[K]","Transcription ","RNA polymerases M/15 Kd subunit;; Nudix N-terminal","--","DNA-directed RNA polymerase subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02722 PE=3 SV=1","K","Transcription","DNA-directed RNA polymerase III subunit RPC10-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","RNA polymerase (ko03020)"]
["c117980.graph_c2",0,0,0,0,0,0,46,7.13,44,7.82,39,6,7.05e-11,5.315378214,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K05909|8.4e-31|ghi:107887550|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-2-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Gag-pol polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_46t00012 PE=4 SV=2","O","Posttranslational modification, protein turnover, chaperones","Gag-pol polyprotein, putative [Solanum demissum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108461.graph_c0",32,1.2,30,1.25,38,1.37,18,0.82,18,0.8,21,0.79,0.007406348,-1.090842182,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115484.graph_c0",145,3.53,141,3.23,138,3.34,476,11.94,543,15.79,593,15.63,1.71e-31,1.596689629,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13416|2.2e-70|lsv:111899016|K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Malectin domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies)","Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2","Non-specific serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01772 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c94319.graph_c0",186,29.52,224,33.56,233,37.95,86,14.36,56,10.63,75,12.21,5.03e-22,-1.876601094,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98010.graph_c0",78,3.03,49,1.8,37,1.48,311,12.34,323,14.68,362,14.29,5.57e-29,2.256771261,"up","--","--","Biological Process: hematopoietic progenitor cell differentiation (GO:0002244);; Biological Process: immune system process (GO:0002376);; Biological Process: immune system development (GO:0002520);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Biological Process: hemopoiesis (GO:0030097);; Biological Process: cell differentiation (GO:0030154);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: animal organ development (GO:0048513);; Biological Process: hematopoietic or lymphoid organ development (GO:0048534);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; ","--","[S]","Function unknown ","Armadillo/beta-catenin-like repeat","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06865 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","armadillo repeat-containing protein 6 isoform X1 [Olea europaea var. sylvestris]","biological process: immune system process (GO:0002376);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","--"]
["c106121.graph_c0",18,6.52,10,3.17,12,4.62,156,11,192,15.43,192,14.64,1.49e-28,3.346315523,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103124.graph_c1",5,0.68,6,0.76,9,1.25,31,4.31,29,4.62,45,6.21,0.000164444,1.908523446,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; ","K22207|8.1e-88|oeu:111384853|K22207 L-cysteine desulfhydrase [EC:4.4.1.28] | (RefSeq) probable L-cysteine desulfhydrase, chloroplastic","[E]","Amino acid transport and metabolism ","--","Probable L-cysteine desulfhydrase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CpNIFS3 PE=1 SV=1","Aminotran_5 domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_33660 PE=4 SV=1","E","Amino acid transport and metabolism","probable L-cysteine desulfhydrase, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Cysteine and methionine metabolism (ko00270)"]
["c117997.graph_c1",1043,64.71,1206,70.65,1071,68.35,610,38.7,600,43.61,539,34.07,1.67e-38,-1.238207807,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[S]","Function unknown ","Uncharacterised protein family (UPF0139)","Protein Asterix OS=Arabidopsis thaliana OX=3702 GN=At5g07960 PE=3 SV=1","Putative membrane protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17119 PE=4 SV=1","S","Function unknown","protein Asterix [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c91204.graph_c0",0,0,0,0,3,0.19,22,1.24,28,1.56,25,1,2.47e-06,3.467383469,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","LEA_2 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21009 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111369031 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101748.graph_c0",3,1.51,3,0.49,13,1.65,42,5.49,15,2.2,39,7.13,0.002456298,1.780727816,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108555.graph_c0",13,1.04,7,0.53,9,0.75,35,2.88,27,2.54,46,3.76,0.002054516,1.465855192,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_28714 PE=4 SV=1","--","--","classical arabinogalactan protein 1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c92018.graph_c0",315,20.74,296,18.43,249,16.86,1085,73.25,928,71.28,999,66.81,1.12e-46,1.483355757,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Protein of unknown function (DUF4079)","--","uncharacterized protein LOC107839337 OS=Capsicum annuum OX=4072 GN=LOC107839337 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111409939 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110192.graph_c0",1,0.02,0,0,2,0.05,36,0.89,39,1.11,27,0.67,2.25e-08,3.914173979,"up","--","--","--","--","--","--","Plant protein of unknown function (DUF936);; Plant protein of unknown function (DUF936)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06049 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111373806 [Olea europaea var. sylvestris]","--","--"]
["c101028.graph_c0",3,0.1,2,0.06,1,0.03,17,0.56,21,1.4,24,0.79,0.000174211,2.590816152,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c88804.graph_c0",14,1.38,23,1.99,29,2.75,61,5.94,70,7.96,71,6.81,0.000374525,1.247838262,"up","--","--","--","--","--","--","DVL family","--","uncharacterized protein LOC104242657 OS=Nicotiana sylvestris OX=4096 GN=LOC104242657 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111369234 [Olea europaea var. sylvestris]","--","--"]
["c100699.graph_c0",82,16.33,97,20.35,96,18.69,17,2.23,10,1.91,11,1.59,2.73e-20,-3.079911522,"down","--","--","--","--","--","--","Protein of unknown function (DUF952)","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016163mg PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111412460 [Olea europaea var. sylvestris]","--","--"]
["c114097.graph_c1",25,0.59,19,0.42,28,0.68,77,1.84,85,2.3,114,2.7,5.18e-07,1.564442778,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09419|3.5e-175|oeu:111385270|K09419 heat shock transcription factor, other eukaryote | (RefSeq) heat shock factor protein HSF30-like","[K]","Transcription ","HSF-type DNA-binding","Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1","heat shock factor protein HSF30 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104245420 PE=3 SV=1","K","Transcription","heat shock factor protein HSF30-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217);; molecular function: binding (GO:0005488)","--"]
["c113959.graph_c0",102,6.26,107,6.89,99,7,4,0.19,6,0.71,10,0.75,4.5e-27,-4.089347088,"down","--","--","Biological Process: fucose metabolic process (GO:0006004);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","--","--","--","GDP-fucose protein O-fucosyltransferase","Protein MANNAN SYNTHESIS-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=MSR1 PE=2 SV=1","O-fucosyltransferase family protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_044217 PE=3 SV=1","G","Carbohydrate transport and metabolism","protein MANNAN SYNTHESIS-RELATED 2-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c105036.graph_c0",45,2.19,26,0.99,23,1.64,19,0.77,13,0.64,12,0.48,0.003412333,-1.336508291,"down","--","--","--","K00924|1.1e-09|nta:107795366|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase TMK1-like","[R]","General function prediction only ","Malectin-like domain;; Leucine Rich repeats (2 copies);; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich Repeat","Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana OX=3702 GN=At1g51890 PE=1 SV=2","Malectin_like domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004889mg PE=4 SV=1","S","Function unknown","probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Olea europaea var. sylvestris]","--","--"]
["c102521.graph_c0",57,1.84,49,1.49,31,1.01,794,24.9,865,32.28,896,28.38,1.54e-122,3.873787484,"up","[GI]","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: pectinesterase activity (GO:0030599);; Biological Process: cell wall modification (GO:0042545);; Molecular Function: aspartyl esterase activity (GO:0045330);; Biological Process: pectin catabolic process (GO:0045490);; ","K01051|7.9e-106|pvu:PHAVU_007G218500g|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) hypothetical protein","--","--","Plant invertase/pectin methylesterase inhibitor;; Pectinesterase;; Pectinesterase","Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana OX=3702 GN=PME34 PE=2 SV=1","Pectinesterase OS=Coffea canephora OX=49390 GN=GSCOC_T00019989001 PE=3 SV=1","I","Lipid transport and metabolism","probable pectinesterase/pectinesterase inhibitor 34 [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152)","Pentose and glucuronate interconversions (ko00040)"]
["c81354.graph_c0",9,0.88,13,0.95,3,0.24,90,8.94,104,10.35,123,12.49,3.7e-17,3.208721348,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: small ribosomal subunit (GO:0015935);; ","K02989|9.1e-99|oeu:111389542|K02989 small subunit ribosomal protein S5e | (RefSeq) 40S ribosomal protein S5-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S7p/S5e","40S ribosomal protein S5 (Fragment) OS=Cicer arietinum OX=3827 GN=RPS5 PE=2 SV=1","Ribosomal protein S7 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07111 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","Ribosomal protein S7 [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c97909.graph_c0",7665,452.34,8416,469.91,7555,460.29,3629,232.34,3204,233.78,3738,236.41,3.35e-213,-1.483364742,"down","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: integral component of membrane (GO:0016021);; ","K07877|1.5e-62|oeu:111378526|K07877 Ras-related protein Rab-2A | (RefSeq) ras-related protein RABB1c-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Ras family","Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1","Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","ras-related protein RABB1c-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94291.graph_c0",569,42.3,656,46.02,593,45.35,277,21.07,280,24.49,306,23.14,1.75e-38,-1.392345288,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13867 PE=4 SV=1","--","--","uncharacterized protein LOC111394500 [Olea europaea var. sylvestris]","--","--"]
["c62517.graph_c0",34,2.72,46,3.63,40,3.16,9,0.71,20,1.8,15,1.45,5.58e-05,-1.676599439,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109374.graph_c0",13155,614.82,13533,602.23,13089,628.58,3434,121.04,2968,116.69,3439,114.01,0,-2.338414671,"down","[E]","Amino acid transport and metabolism ","Molecular Function: 3-deoxy-7-phosphoheptulonate synthase activity (GO:0003849);; Biological Process: aromatic amino acid family biosynthetic process (GO:0009073);; Biological Process: chorismate biosynthetic process (GO:0009423);; Cellular Component: chloroplast (GO:0009507);; ","K01626|9.8e-196|oeu:111409339|K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] | (RefSeq) phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like","--","--","Class-II DAHP synthetase family;; Class-II DAHP synthetase family;; Class-II DAHP synthetase family","Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=DHAPS-1 PE=2 SV=1","Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10469 PE=3 SV=1","E","Amino acid transport and metabolism","phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Biosynthesis of amino acids (ko01230)"]
["c100824.graph_c0",114,4.1,109,3.61,71,2.47,422,14.48,514,20.36,561,19.61,3.4e-34,2.016371074,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K17086|0.0e+00|oeu:111404146|K17086 transmembrane 9 superfamily member 2/4 | (RefSeq) transmembrane 9 superfamily member 8-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Endomembrane protein 70;; Endomembrane protein 70","Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana OX=3702 GN=TMN8 PE=2 SV=1","Transmembrane 9 superfamily member OS=Striga asiatica OX=4170 GN=STAS_08559 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","transmembrane 9 superfamily member 8-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97085.graph_c0",54,1.95,141,4.83,131,4.91,4,0.15,16,0.68,12,0.44,1.14e-07,-3.243276616,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Anthurium amnicola OX=1678845 GN=g.51847 PE=4 SV=1","--","--","--","--","--"]
["c79618.graph_c0",33,3.88,50,5.54,30,3.62,111,13.38,88,12.16,107,12.81,6.95e-05,1.095263852,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G024001 PE=4 SV=1","--","--","uncharacterized protein LOC111374464 [Olea europaea var. sylvestris]","--","--"]
["c111962.graph_c0",0,0,2,0.06,1,0.03,29,0.88,19,0.66,35,1.05,6.11e-07,3.609696798,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112318.graph_c0",57,2.28,68,3.09,55,2.5,221,12.81,179,11.31,200,10.35,3.89e-12,1.399818219,"up","--","--","--","--","--","--","--","--","ASCH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14272 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111378916 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c78804.graph_c0",34,3.18,32,2.82,51,4.9,0,0,0,0,0,0,9.38e-13,-5.704405889,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115393.graph_c1",68,1.13,91,1.43,84,1.44,40,0.68,42,0.82,68,1.16,0.000302947,-1.006358814,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111402458 [Olea europaea var. sylvestris]","--","--"]
["c104185.graph_c0",15,1.54,6,0.51,7,0.7,30,3.49,39,5,32,3.4,0.003914361,1.434852811,"up","--","--","--","--","--","--","--","--","--","--","--","probable protein S-acyltransferase 3 [Olea europaea var. sylvestris]","--","--"]
["c95957.graph_c1",43,1.65,50,1.69,39,1.59,174,7.44,163,7.52,179,7.83,1.88e-13,1.6246563,"up","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: metal ion binding (GO:0046872);; ","K17506|8.7e-50|oeu:111388597|K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 11","[T]","Signal transduction mechanisms ","Protein phosphatase 2C","Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana OX=3702 GN=At1g43900 PE=2 SV=1","Protein-serine/threonine phosphatase OS=Juglans regia OX=51240 GN=LOC109013668 PE=3 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 11 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c98057.graph_c0",648,25.72,667,23.88,623,23.56,318,12.23,270,11.32,271,9.92,4.33e-43,-1.490217927,"down","--","--","Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[DKT]","--","LEM3 (ligand-effect modulator 3) family / CDC50 family;; LEM3 (ligand-effect modulator 3) family / CDC50 family","ALA-interacting subunit 5 OS=Arabidopsis thaliana OX=3702 GN=ALIS5 PE=1 SV=1","ALA-interacting subunit OS=Dorcoceras hygrometricum OX=472368 GN=F511_23715 PE=3 SV=1","--","--","putative ALA-interacting subunit 4 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103570.graph_c0",82,4.63,70,3.73,81,4.83,543,30.89,529,34.19,544,31.11,4.44e-60,2.456396687,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K08669|5.8e-26|ppp:112283886|K08669 HtrA serine peptidase 2 [EC:3.4.21.108] | (RefSeq) putative protease Do-like 14 isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","--","Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DEGP5 PE=1 SV=3","Peptidase Do OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23403 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","protease Do-like 5, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c114787.graph_c0",19,1.58,23,2.49,22,1.49,502,16.77,504,18.79,558,17.52,5.52e-87,4.23280169,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","--","[R]","General function prediction only ","--","Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H89 PE=3 SV=1","DYW_deaminase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_026722 PE=3 SV=1","S","Function unknown","putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c102188.graph_c0",36,5.31,48,6.04,34,5.28,6,0.69,4,0.53,0,0,1.1e-10,-3.51494095,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117641.graph_c0",356,8.33,346,8.66,334,8.75,36,1.25,30,1.7,38,1.24,2.42e-79,-3.603865988,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","K12398|8.8e-11|sind:105168973|K12398 AP-3 complex subunit mu | (RefSeq) AP-3 complex subunit mu","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","AP-3 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP3M PE=1 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14276 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111386857, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c101624.graph_c1",421,28.72,448,29.22,440,31.27,1320,95.17,1141,94.94,1279,91.85,1.4e-42,1.188255047,"up","[I]","Lipid transport and metabolism ","Molecular Function: enoyl-[acyl-carrier-protein] reductase (NADH) activity (GO:0004318);; Biological Process: fatty acid biosynthetic process (GO:0006633);; ","K00208|8.5e-146|oeu:111399695|K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] | (RefSeq) enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like","[R]","General function prediction only ","Enoyl-(Acyl carrier protein) reductase","Enoyl-[acyl-carrier-protein] reductase [NADH] 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0327400 PE=2 SV=1","Enoyl ACP reductase OS=Olea europaea subsp. europaea OX=158383 GN=ear PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Fatty acid biosynthesis (ko00061);; Biotin metabolism (ko00780);; Fatty acid metabolism (ko01212)"]
["c69458.graph_c0",0,0,0,0,0,0,65,12.27,85,19.6,128,25.06,3.33e-16,6.254678928,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13162 PE=4 SV=1","--","--","uncharacterized protein LOC111381284 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c112037.graph_c0",221,5.24,257,5.78,214,5.87,145,3.65,102,2.94,135,3.38,1.22e-12,-1.173521262,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: RNA uridylyltransferase activity (GO:0050265);; ","--","--","--","--","--","RNA uridylyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25582 PE=4 SV=1","--","--","uncharacterized protein LOC111375720 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c89486.graph_c0",2,0.27,1,0.11,1,0.12,21,2.6,38,5.38,19,2.33,3.46e-06,3.296534196,"up","--","--","--","--","--","--","Protein of unknown function, DUF538","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_010206 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111402515 [Olea europaea var. sylvestris]","--","--"]
["c103911.graph_c2",49,4.16,66,5.19,31,2.79,20,1.14,8,0.69,10,0.56,4.29e-07,-2.143939517,"down","--","--","--","K06636|1.3e-39|mcha:111023062|K06636 structural maintenance of chromosome 1 | (RefSeq) structural maintenance of chromosomes protein 1-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_2110 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111374981 [Olea europaea var. sylvestris]","--","--"]
["c106443.graph_c0",6012,148.95,6759,158.31,6375,162.85,3310,84.3,2438,73.05,2971,76.14,1.2e-92,-1.459297718,"down","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05658|0.0e+00|oeu:111407228|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] | (RefSeq) ABC transporter B family member 9-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter transmembrane region;; ABC transporter;; Predicted ATPase of the ABC class;; ABC transporter","ABC transporter B family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCB9 PE=3 SV=2","Multidrug/pheromone exporter, ABC superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13560 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter B family member 9-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c104638.graph_c0",37,1.59,30,1.24,34,1.56,85,3.91,93,4.78,79,3.5,0.000600303,1.006884649,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; ","--","--","--","Amino-transferase class IV","--","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00017654001 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111376373 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c98012.graph_c1",62,5.28,72,5.88,67,5.9,0,0,1,0.09,2,0.15,1.43e-18,-5.450529234,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106557.graph_c2",74,10.01,83,10.55,49,6.77,30,4.16,35,5.56,50,6.87,0.000237526,-1.132636293,"down","[P]","Inorganic ion transport and metabolism ","Molecular Function: sulfate adenylyltransferase (ATP) activity (GO:0004781);; ","K13811|3.1e-87|oeu:111369600|K13811 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25] | (RefSeq) ATP sulfurylase 1, chloroplastic-like","[P]","Inorganic ion transport and metabolism ","PUA-like domain","ATP sulfurylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APS1 PE=1 SV=1","Sulfate adenylyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23638 PE=4 SV=1","P","Inorganic ion transport and metabolism","ATP sulfurylase 1, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Purine metabolism (ko00230);; Monobactam biosynthesis (ko00261);; Selenocompound metabolism (ko00450);; Sulfur metabolism (ko00920)"]
["c115832.graph_c1",152,5.04,141,4.59,131,4.58,15,0.24,26,4,28,0.48,2.08e-27,-2.882656293,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K01147|8.0e-17|vra:106774033|K01147 exoribonuclease II [EC:3.1.13.1] | (RefSeq) uncharacterized protein LOC106774033","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Dendrobium catenatum OX=906689 GN=MA16_Dca013638 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111372852 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c115524.graph_c2",5,0.11,5,0.28,2,0.05,28,1.73,44,2.89,43,1.6,9.26e-07,2.68733372,"up","--","--","Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; ","K20178|3.0e-49|cann:107864957|K20178 vacuolar protein sorting-associated protein 8 | (RefSeq) uncharacterized LOC107864957","[R]","General function prediction only ","Domain of unknown function (DUF4283);; Reverse transcriptase (RNA-dependent DNA polymerase)","Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1","Non-LTR retroelement reverse transcriptase-like protein OS=Striga asiatica OX=4170 GN=STAS_24822 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","uncharacterized protein LOC111371175 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c116227.graph_c0",91,1.81,123,2.46,111,2.3,254,6.08,269,6.41,313,6.38,1.39e-09,1.031951126,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellulose biosynthetic process (GO:0030244);; ","K13415|1.8e-54|egr:104418186|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; HPP family","LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana OX=3702 GN=FEI1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17091 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase FEI 1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","Plant hormone signal transduction (ko04075)"]
["c102040.graph_c0",2220,86.13,2305,88.53,2110,78.04,1114,41.29,1005,43.53,1215,42.71,1.91e-99,-1.315853806,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K04688|2.5e-267|oeu:111398719|K04688 ribosomal protein S6 kinase beta [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase AtPK2/AtPK19-like","[RT]","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Fungal protein kinase;; Kinase-like;; Lipopolysaccharide kinase (Kdo/WaaP) family;; Protein kinase C terminal domain","Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana OX=3702 GN=ATPK2 PE=1 SV=2","40S ribosomal protein S6 kinase OS=Fraxinus mandshurica OX=56029 GN=S6K1 PE=2 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase AtPK2/AtPK19-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c113347.graph_c1",205,7.44,229,7.04,193,8.05,83,3.37,62,2.69,83,3.32,2.36e-22,-1.768007305,"down","[IQR]","--","Cellular Component: integral component of membrane (GO:0016021);; ","K11170|6.9e-80|lja:Lj0g3v0095029.1|K11170 dehydrogenase/reductase SDR family member X [EC:1.1.-.-] | (RefSeq) Lj0g3v0095029.1; -","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","short chain dehydrogenase;; Enoyl-(Acyl carrier protein) reductase","Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1","Rossmann-fold NAD(P)-binding domain-containing protein isoform 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_12725 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","dehydrogenase/reductase SDR family member on chromosome X isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c85720.graph_c0",2,0.43,6,1.2,4,0.84,25,5.5,20,4.83,27,5.61,0.000809632,2.022467399,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112052.graph_c0",1409,46.07,1361,42.29,1272,43.31,3693,122.16,3290,125.96,3833,128.19,2.95e-78,1.095025885,"up","--","--","Molecular Function: DNA binding (GO:0003677);; ","K01051|4.2e-17|var:108341535|K01051 pectinesterase [EC:3.1.1.11] | (RefSeq) probable pectinesterase/pectinesterase inhibitor 58","[K]","Transcription ","Myb/SANT-like DNA-binding domain;; Myb-like DNA-binding domain;; Alcohol dehydrogenase transcription factor Myb/SANT-like;; Myb-like DNA-binding domain","Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1","Putative Duplicated homeodomain-like superfamily protein OS=Davidia involucrata OX=16924 GN=Din_019034 PE=4 SV=1","K","Transcription","trihelix transcription factor GT-2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Pentose and glucuronate interconversions (ko00040)"]
["c83166.graph_c0",91,4.36,130,5.89,88,4.34,284,13.96,286,16.07,333,16.29,7.38e-13,1.218293108,"up","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","K20628|5.2e-74|oeu:111401605|K20628 expansin | (RefSeq) expansin-A15-like","--","--","Expansin C-terminal domain;; Lytic transglycolase","Expansin-A13 OS=Arabidopsis thaliana OX=3702 GN=EXPA13 PE=2 SV=2","Expansin OS=Osmanthus fragrans OX=93977 PE=2 SV=1","S","Function unknown","EXPA8 [Osmanthus fragrans]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c103810.graph_c0",9,0.35,8,0.41,10,0.37,39,2.98,37,3.59,25,1.6,0.002365482,1.486680524,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; ","K13510|8.9e-57|oeu:111391388|K13510 lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67] | (RefSeq) lysophospholipid acyltransferase LPEAT2-like","--","--","EF-hand domain;; EF hand;; EF-hand domain pair;; EF-hand domain pair","Lysophospholipid acyltransferase LPEAT2 OS=Arabidopsis thaliana OX=3702 GN=LPEAT2 PE=1 SV=1","Lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase OS=Salvia splendens OX=180675 GN=LPCAT1_2 PE=4 SV=1","I","Lipid transport and metabolism","lysophospholipid acyltransferase LPEAT2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565)"]
["c37250.graph_c0",0,0,0,0,0,0,27,11.58,30,14.83,24,10.17,3.23e-08,4.715251219,"up","--","--","Cellular Component: condensin complex (GO:0000796);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: mitotic chromosome condensation (GO:0007076);; Biological Process: cell division (GO:0051301);; ","K06676|7.1e-19|oeu:111402084|K06676 condensin complex subunit 2 | (RefSeq) condensin complex subunit 2 isoform X1","[BD]","--","--","Condensin complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CAPH PE=1 SV=1","Condensin complex subunit 2 OS=Coffea canephora OX=49390 GN=GSCOC_T00017358001 PE=3 SV=1","--","--","condensin complex subunit 2 isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c108439.graph_c0",35,1.91,43,1.99,53,3.43,134,6.51,114,7.72,97,4.97,0.000100974,1.055232653,"up","[P]","Inorganic ion transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; ","K08994|1.3e-207|oeu:111411310|K08994 ion channel-forming bestrophin family protein | (RefSeq) UPF0187 protein At3g61320, chloroplastic-like","--","--","Bestrophin, RFP-TM, chloride channel","UPF0187 protein At3g61320, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g61320 PE=2 SV=2","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_019216 PE=4 SV=1","S","Function unknown","UPF0187 protein At3g61320, chloroplastic-like, partial [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111295.graph_c0",5947,73.85,5824,69.58,5677,72.38,3959,53.38,3101,48.1,3568,47.37,2.36e-59,-1.039211467,"down","[E]","Amino acid transport and metabolism ","Biological Process: glutamate biosynthetic process (GO:0006537);; Molecular Function: glutamate synthase activity (GO:0015930);; ","K00284|0.0e+00|sind:105159899|K00284 glutamate synthase (ferredoxin) [EC:1.4.7.1] | (RefSeq) ferredoxin-dependent glutamate synthase, chloroplastic","[E]","Amino acid transport and metabolism ","Glutamine amidotransferases class-II;; Conserved region in glutamate synthase;; Glutamate synthase central domain;; GXGXG motif;; Conserved region in glutamate synthase","Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLU1 PE=1 SV=3","Glutamate synthase 1 isoform 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_03431 PE=3 SV=1","E","Amino acid transport and metabolism","ferredoxin-dependent glutamate synthase, chloroplastic [Sesamum indicum]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910)"]
["c91018.graph_c0",0,0,0,0,0,0,30,1.23,23,1.08,26,1.06,4.48e-08,4.677719296,"up","--","--","--","K05863|7.1e-06|cpap:110811824|K05863 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 | (RefSeq) ADP,ATP carrier protein, mitochondrial-like","--","--","gag-polypeptide of LTR copia-type","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020902 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein EZV62_020902 [Acer yangbiense]","--","--"]
["c114965.graph_c3",0,0,0,0,0,0,166,5.28,171,6.23,215,6.81,5.5e-23,7.147615007,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K05666|1.2e-21|cann:107874343|K05666 ATP-binding cassette, subfamily C (CFTR/MRP), member 2 | (RefSeq) ABC transporter C family member 10-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Zinc knuckle;; GAG-pre-integrase domain","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1","T","Signal transduction mechanisms","putative gag-pol polyprotein [Cucumis melo var. makuwa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","ABC transporters (ko02010)"]
["c105573.graph_c0",33,0.66,49,0.93,31,0.64,3,0.06,2,0.05,5,0.1,1.44e-10,-3.477172948,"down","--","--","--","--","[TR]","--","BTG family","--","--","--","--","hypothetical protein LRAMOSA05281 [Lichtheimia ramosa]","--","--"]
["c61002.graph_c0",1273,248.29,1509,275.46,1373,273.24,539,107.95,503,115.6,574,113.76,5.02e-92,-1.682307586,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116085.graph_c1",41,0.65,30,0.45,32,0.52,13,0.21,17,0.31,10,0.16,0.000257621,-1.591333834,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K03515|6.3e-29|ghi:107894697|K03515 DNA repair protein REV1 [EC:2.7.7.-] | (RefSeq) uncharacterized protein LOC107894697","[R]","General function prediction only ","--","--","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_024814 PE=4 SV=1","--","--","uncharacterized protein LOC18046468 isoform X2 [Citrus clementina]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c112529.graph_c0",1504,48.79,1625,48.85,1457,48.99,523,16.86,477,17.35,570,18.64,1.23e-135,-1.867179926,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity (GO:0003825);; Biological Process: trehalose biosynthetic process (GO:0005992);; ","K16055|0.0e+00|oeu:111391436|K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] | (RefSeq) probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 isoform X1","[G]","Carbohydrate transport and metabolism ","Glycosyltransferase family 20;; Trehalose-phosphatase;; haloacid dehalogenase-like hydrolase","Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana OX=3702 GN=TPS11 PE=2 SV=1","Trehalose-6-phosphate synthase component TPS1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12640 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Starch and sucrose metabolism (ko00500)"]
["c96659.graph_c0",11,0.51,4,0.17,14,0.67,36,1.7,41,2.16,45,2.07,0.000524859,1.634042342,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","--","--","--","IQ calmodulin-binding motif;; Protein of unknown function (DUF4005)","Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana OX=3702 GN=IQD14 PE=1 SV=1","DUF4005 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10459 PE=4 SV=1","S","Function unknown","protein IQ-DOMAIN 14 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c114119.graph_c0",39,1.34,14,0.33,13,0.38,234,7.02,275,9.01,316,9.81,1.78e-11,3.118068569,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: beta-glucosidase activity (GO:0008422);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: scopolin beta-glucosidase activity (GO:0102483);; ","K21362|0.0e+00|oeu:111371565|K21362 galactolipid galactosyltransferase [EC:2.4.1.184] | (RefSeq) beta-glucosidase-like SFR2, chloroplastic isoform X1","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolase family 1;; Cellulase (glycosyl hydrolase family 5)","Beta-glucosidase-like SFR2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SFR2 PE=2 SV=1","Beta-glucosidase, lactase phlorizinhydrolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09231 PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-glucosidase-like SFR2, chloroplastic isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Glycerolipid metabolism (ko00561)"]
["c94956.graph_c0",259,19.54,253,18.01,227,17.6,86,6.71,110,9.73,109,8.36,1.08e-20,-1.583234333,"down","--","--","Biological Process: cell morphogenesis (GO:0000902);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: regulatory region nucleic acid binding (GO:0001067);; Biological Process: response to acid chemical (GO:0001101);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: ribosome (GO:0005840);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: sulfur compound metabolic process (GO:0006790);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: cytokinin-activated signaling pathway (GO:0009736);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: gibberellic acid mediated signaling pathway (GO:0009740);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of abscisic acid-activated signaling pathway (GO:0009787);; Biological Process: negative regulation of abscisic acid-activated signaling pathway (GO:0009788);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: trichome differentiation (GO:0010026);; Biological Process: response to organic substance (GO:0010033);; Biological Process: trichome morphogenesis (GO:0010090);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: gibberellin mediated signaling pathway (GO:0010476);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Biological Process: cellular component organization (GO:0016043);; Biological Process: S-glycoside metabolic process (GO:0016143);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: secondary metabolic process (GO:0019748);; Biological Process: glycosinolate metabolic process (GO:0019757);; Biological Process: glucosinolate metabolic process (GO:0019760);; Cellular Component: cytosolic ribosome (GO:0022626);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: signaling (GO:0023052);; Biological Process: negative regulation of signaling (GO:0023057);; Biological Process: cell differentiation (GO:0030154);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: cellular component morphogenesis (GO:0032989);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: oxoacid metabolic process (GO:0043436);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: transcription regulatory region sequence-specific DNA binding (GO:0044212);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cytosolic part (GO:0044445);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: cell development (GO:0048468);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to cytokinin stimulus (GO:0071368);; Biological Process: cellular response to gibberellin stimulus (GO:0071370);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: plant epidermis development (GO:0090558);; Biological Process: plant epidermis morphogenesis (GO:0090626);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of response to alcohol (GO:1901419);; Biological Process: negative regulation of response to alcohol (GO:1901420);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: glycosyl compound metabolic process (GO:1901657);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular response to alcohol (GO:1905957);; Biological Process: negative regulation of cellular response to alcohol (GO:1905958);; Cellular Component: ribonucleoprotein complex (GO:1990904);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K10773|4.0e-09|egu:105039152|K10773 endonuclease III [EC:4.2.99.18] | (RefSeq) putative DNA glycosylase At3g47830 isoform X1","--","--","C2H2-type zinc finger","Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1","C2H2-type domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00032659001 PE=4 SV=1","S","Function unknown","zinc finger protein GIS3-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: macromolecular complex (GO:0032991);; biological process: metabolic process (GO:0008152);; biological process: signaling (GO:0023052)","Base excision repair (ko03410)"]
["c109719.graph_c1",40,1.51,62,2.31,49,1.73,8,0.21,2,0.21,12,0.63,6.9e-11,-2.934643679,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; Cellular Component: integral component of membrane (GO:0016021);; ","K12447|2.9e-120|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; Integrase core domain;; GAG-pre-integrase domain;; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Seven transmembrane MLO family protein OS=Prunus dulcis OX=3755 GN=Prudu_021276 PE=4 SV=1","--","--","hypothetical protein Prudu_013672 [Prunus dulcis]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c114712.graph_c1",67,6.85,67,6.45,66,6.82,17,1.75,24,2.84,32,3.28,6.85e-08,-1.730872115,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99685.graph_c1",217,17.18,244,19.45,174,14.67,1065,85.98,1227,117.77,1298,107.8,1.56e-79,2.174564608,"up","--","--","--","--","--","--","--","--","--","--","--","prostatic spermine-binding protein-like isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c114733.graph_c0",5461,112.07,6007,116.64,5396,115.96,20389,398.93,17377,394.26,19799,385.94,3.88e-194,1.447310238,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: structural constituent of ribosome (GO:0003735);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718);; Biological Process: flavonoid metabolic process (GO:0009812);; Biological Process: flavonoid biosynthetic process (GO:0009813);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Cellular Component: extrinsic component of membrane (GO:0019898);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: extrinsic component of organelle membrane (GO:0031312);; Cellular Component: organelle subcompartment (GO:0031984);; Cellular Component: nuclear outer membrane-endoplasmic reticulum membrane network (GO:0042175);; Cellular Component: extrinsic component of endoplasmic reticulum membrane (GO:0042406);; Biological Process: pigment metabolic process (GO:0042440);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete endoplasmic reticulum part (GO:0044432);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: dihydrokaempferol 4-reductase activity (GO:0045552);; Biological Process: pigment biosynthetic process (GO:0046148);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: endoplasmic reticulum subcompartment (GO:0098827);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K02957|5.2e-49|cic:CICLE_v10033065mg|K02957 small subunit ribosomal protein S15Ae | (RefSeq) hypothetical protein","[V]","Defense mechanisms ","NAD(P)H-binding;; NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; Male sterility protein;; NmrA-like family;; Ribosomal protein S8","40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2","Flavonol reductase/cinnamoyl-CoA reductase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03769 PE=4 SV=1","V","Defense mechanisms","cinnamoyl-CoA reductase-like SNL6 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: macromolecular complex (GO:0032991);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Ribosome (ko03010)"]
["c110918.graph_c0",37,4.41,37,4.35,27,2.78,424,57.6,409,60.52,446,54.68,2.46e-66,3.307474349,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; ","K01803|2.0e-16|sbi:8057784|K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] | (RefSeq) triosephosphate isomerase, cytosolic","[R]","General function prediction only ","C2 domain","Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1","C2 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034656 PE=4 SV=1","S","Function unknown","elicitor-responsive protein 3 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Inositol phosphate metabolism (ko00562);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c94162.graph_c0",18,4.24,27,4.3,26,5.81,318,59.32,434,93.96,404,73.17,1.36e-54,3.651538175,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11253|1.2e-67|han:110898865|K11253 histone H3 | (RefSeq) histone H3-like centromeric protein CNA1","[B]","Chromatin structure and dynamics ","Core histone H2A/H2B/H3/H4","Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2","Histone H3.2 OS=Jatropha curcas OX=180498 GN=JCGZ_07912 PE=3 SV=1","B","Chromatin structure and dynamics","hypothetical protein JCGZ_07912 [Jatropha curcas]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c117744.graph_c0",853,29.96,907,27.44,875,29.65,413,12.18,381,14.15,390,13.41,6.84e-56,-1.472472868,"down","[E]","Amino acid transport and metabolism ","Biological Process: cellular amino acid metabolic process (GO:0006520);; Molecular Function: transaminase activity (GO:0008483);; Biological Process: biosynthetic process (GO:0009058);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","K00815|4.3e-207|oeu:111368893|K00815 tyrosine aminotransferase [EC:2.6.1.5] | (RefSeq) probable aminotransferase TAT2","[E]","Amino acid transport and metabolism ","Aminotransferase class I and II","Probable aminotransferase TAT2 OS=Arabidopsis thaliana OX=3702 GN=At5g53970 PE=2 SV=1","Probable aminotransferase OS=Olea europaea OX=4146 PE=2 SV=1","E","Amino acid transport and metabolism","probable aminotransferase [Olea europaea]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Ubiquinone and other terpenoid-quinone biosynthesis (ko00130);; Cysteine and methionine metabolism (ko00270);; Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Phenylalanine, tyrosine and tryptophan biosynthesis (ko00400);; Isoquinoline alkaloid biosynthesis (ko00950);; Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)"]
["c95668.graph_c0",14,0.86,12,0.69,18,1.13,74,4.49,73,5.08,47,2.78,6.03e-06,1.751346092,"up","[E]","Amino acid transport and metabolism ","Biological Process: glutamate biosynthetic process (GO:0006537);; Molecular Function: glutamate synthase activity (GO:0015930);; ","K00284|7.6e-131|oeu:111379166|K00284 glutamate synthase (ferredoxin) [EC:1.4.7.1] | (RefSeq) ferredoxin-dependent glutamate synthase, chloroplastic-like","[E]","Amino acid transport and metabolism ","Glutamine amidotransferases class-II","Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GLU1 PE=1 SV=3","Glutamate synthase 1 isoform 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_03431 PE=3 SV=1","E","Amino acid transport and metabolism","ferredoxin-dependent glutamate synthase, chloroplastic-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910)"]
["c98650.graph_c0",3,0.16,2,0.1,1,0.05,74,3.99,57,3.48,53,2.81,5.79e-13,4.123472272,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06413 PE=4 SV=1","--","--","uncharacterized protein LOC111366578 [Olea europaea var. sylvestris]","--","--"]
["c108809.graph_c1",80,2.28,89,2.91,77,2.12,300,9.41,220,8.6,281,8.59,1.55e-14,1.365486539,"up","--","--","Molecular Function: RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978);; Molecular Function: DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of transcription by RNA polymerase II (GO:0006357);; Biological Process: biological_process (GO:0008150);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Cellular Component: cell junction (GO:0030054);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Cellular Component: symplast (GO:0055044);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","[K]","Transcription ","Associated with HOX;; Homeobox KN domain;; Homeodomain","Homeobox protein BEL1 homolog OS=Arabidopsis thaliana OX=3702 GN=BEL1 PE=1 SV=2","POX family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_016315 PE=3 SV=1","K","Transcription","homeobox protein BEL1 homolog [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044)","--"]
["c107747.graph_c0",90,4.25,103,4.48,83,4.03,255,12.61,262,14.45,312,15.11,1.44e-13,1.25463316,"up","--","--","--","--","--","--","zinc-binding in reverse transcriptase","--","Ribonuclease H protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28342 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111369723 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c100646.graph_c0",86,5.45,78,4.49,90,5.54,182,10.67,329,23.81,314,18.45,1.03e-09,1.363058975,"up","[E]","Amino acid transport and metabolism ","Molecular Function: methionine gamma-lyase activity (GO:0018826);; Biological Process: transsulfuration (GO:0019346);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","K01761|7.9e-249|oeu:111376571|K01761 methionine-gamma-lyase [EC:4.4.1.11] | (RefSeq) methionine gamma-lyase-like","[E]","Amino acid transport and metabolism ","Cys/Met metabolism PLP-dependent enzyme;; Aminotransferase class I and II;; Aminotransferase class-V","Methionine gamma-lyase OS=Arabidopsis thaliana OX=3702 GN=MGL PE=1 SV=1","Cystathionine beta-lyase/cystathionine gamma-synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29413 PE=3 SV=1","E","Amino acid transport and metabolism","methionine gamma-lyase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Cysteine and methionine metabolism (ko00270);; Selenocompound metabolism (ko00450)"]
["c106173.graph_c2",8,0.42,5,0.22,3,0.15,54,2.39,49,2.68,45,2,2.66e-08,2.696902145,"up","[T]","Signal transduction mechanisms ","Biological Process: phosphorelay signal transduction system (GO:0000160);; Biological Process: response to acid chemical (GO:0001101);; Biological Process: response to molecule of bacterial origin (GO:0002237);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein histidine kinase activity (GO:0004673);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: amine metabolic process (GO:0009308);; Biological Process: response to heat (GO:0009408);; Biological Process: detection of chemical stimulus (GO:0009593);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to bacterium (GO:0009617);; Biological Process: response to insect (GO:0009625);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cytokinin metabolic process (GO:0009690);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: detection of hormone stimulus (GO:0009720);; Biological Process: response to ethylene (GO:0009723);; Biological Process: response to hormone (GO:0009725);; Biological Process: detection of endogenous stimulus (GO:0009726);; Biological Process: detection of ethylene stimulus (GO:0009727);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: response to gibberellin (GO:0009739);; Biological Process: response to carbohydrate (GO:0009743);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: carbohydrate mediated signaling (GO:0009756);; Biological Process: ethylene-activated signaling pathway (GO:0009873);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to metal ion (GO:0010038);; Biological Process: response to iron ion (GO:0010039);; Biological Process: phloem or xylem histogenesis (GO:0010087);; Biological Process: regulation of ethylene-activated signaling pathway (GO:0010104);; Biological Process: negative regulation of ethylene-activated signaling pathway (GO:0010105);; Biological Process: regulation of stomatal movement (GO:0010119);; Biological Process: sugar mediated signaling pathway (GO:0010182);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Biological Process: regulation of hormone levels (GO:0010817);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Molecular Function: phosphotransferase activity, nitrogenous group as acceptor (GO:0016775);; Biological Process: antibiotic metabolic process (GO:0016999);; Biological Process: antibiotic biosynthetic process (GO:0017000);; Biological Process: drug metabolic process (GO:0017144);; Biological Process: peptidyl-histidine phosphorylation (GO:0018106);; Biological Process: peptidyl-amino acid modification (GO:0018193);; Biological Process: peptidyl-histidine modification (GO:0018202);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: signaling (GO:0023052);; Biological Process: negative regulation of signaling (GO:0023057);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: polysaccharide localization (GO:0033037);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: response to lipid (GO:0033993);; Biological Process: cellular hormone metabolic process (GO:0034754);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: protein modification process (GO:0036211);; Molecular Function: signaling receptor activity (GO:0038023);; Molecular Function: ethylene receptor activity (GO:0038199);; Biological Process: response to chemical (GO:0042221);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: cell wall modification (GO:0042545);; Molecular Function: hormone binding (GO:0042562);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: hydrogen peroxide metabolic process (GO:0042743);; Molecular Function: identical protein binding (GO:0042802);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: external encapsulating structure organization (GO:0045229);; Biological Process: heterocycle metabolic process (GO:0046483);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of post-embryonic development (GO:0048580);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: hydrogen peroxide biosynthetic process (GO:0050665);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; Biological Process: obsolete cofactor metabolic process (GO:0051186);; Biological Process: obsolete cofactor biosynthetic process (GO:0051188);; Biological Process: regulation of multicellular organismal process (GO:0051239);; Biological Process: cell division (GO:0051301);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: cellular localization (GO:0051641);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Molecular Function: ethylene binding (GO:0051740);; Biological Process: cell wall thickening (GO:0052386);; Biological Process: defense response by cell wall thickening (GO:0052482);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: callose localization (GO:0052545);; Molecular Function: molecular transducer activity (GO:0060089);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: regulation of phosphorelay signal transduction system (GO:0070297);; Biological Process: negative regulation of phosphorelay signal transduction system (GO:0070298);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to inorganic substance (GO:0071241);; Biological Process: cellular response to metal ion (GO:0071248);; Biological Process: cellular response to iron ion (GO:0071281);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to carbohydrate stimulus (GO:0071322);; Biological Process: cellular response to ethylene stimulus (GO:0071369);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: cell wall organization (GO:0071555);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Molecular Function: alkene binding (GO:0072328);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; Biological Process: response to alcohol (GO:0097305);; Biological Process: defense response to other organism (GO:0098542);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: regulation of seedling development (GO:1900140);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; Biological Process: regulation of intracellular signal transduction (GO:1902531);; Biological Process: negative regulation of intracellular signal transduction (GO:1902532);; Biological Process: reactive oxygen species biosynthetic process (GO:1903409);; Biological Process: regulation of multicellular organismal development (GO:2000026);; ","K14509|7.5e-83|nta:107824400|K14509 ethylene receptor [EC:2.7.13.-] | (RefSeq) ethylene receptor 1-like","[T]","Signal transduction mechanisms ","Response regulator receiver domain","Ethylene receptor 1 OS=Solanum lycopersicum OX=4081 GN=ETR1 PE=1 SV=1","ethylene receptor 1-like OS=Nicotiana tabacum OX=4097 GN=LOC107824400 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: ethylene receptor 1-like [Nicotiana tabacum]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; biological process: developmental process (GO:0032502);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: localization (GO:0051179);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c116413.graph_c1",30,1.78,40,2.13,27,1.37,163,7.3,132,8.21,135,5.26,2.06e-12,1.797940589,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_22590 PE=4 SV=1","--","--","uncharacterized protein LOC111412332 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c95517.graph_c0",9,0.32,9,0.27,8,0.27,205,6.86,253,9.77,272,9.02,2.31e-41,4.353827144,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.6e-185|cmos:111458629|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 2.13-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 2.13 OS=Arabidopsis thaliana OX=3702 GN=NPF2.13 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00032164001 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 2.13 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c99821.graph_c0",157,9.38,169,9.69,135,8.26,391,23.64,409,29.01,437,26.6,1.89e-15,1.099194388,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09286|3.5e-86|oeu:111393394|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor RAP2-3-like","--","--","AP2 domain","Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2","AP2/ERF domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017750 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor RAP2-3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c102651.graph_c2",2,0.22,0,0,1,0.11,16,1.83,14,1.84,19,2.16,0.000242623,2.883804413,"up","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: ATP binding (GO:0005524);; Biological Process: phospholipid transport (GO:0015914);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase-coupled intramembrane lipid transporter activity (GO:0140326);; ","K01530|1.1e-107|sind:105177127|K01530 phospholipid-translocating ATPase [EC:7.6.2.1] | (RefSeq) probable phospholipid-transporting ATPase 8","[R]","General function prediction only ","--","Probable phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana OX=3702 GN=ALA8 PE=3 SV=1","Phospholipid-transporting ATPase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009515 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable phospholipid-transporting ATPase 8 [Sesamum indicum]","molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105602.graph_c1",341,9.43,373,10.02,322,9.76,1156,31.88,1055,32.95,1195,32.76,4.03e-55,1.391871426,"up","[F]","Nucleotide transport and metabolism ","Molecular Function: catalytic activity (GO:0003824);; Biological Process: nucleoside metabolic process (GO:0009116);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Phosphorylase superfamily","Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1","PNP_UDP_1 domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5724 PE=4 SV=1","F","Nucleotide transport and metabolism","bark storage protein A-like [Juglans regia]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c88055.graph_c0",19,1.44,30,2.07,26,1.95,53,3.94,80,6.8,71,5.25,0.001478749,1.095083966,"up","--","--","--","--","--","--","--","--","--","--","--","PLASMODESMATA CALLOSE-BINDING PROTEIN 2-like [Olea europaea var. sylvestris]","--","--"]
["c117363.graph_c0",26,0.75,32,0.75,16,0.34,41,1.19,72,2.54,87,3.04,0.003733128,1.079574837,"up","--","--","--","K03798|1.5e-94|pda:103716421|K03798 cell division protease FtsH [EC:3.4.24.-] | (RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Protein of unknown function (DUF642);; Protein of unknown function (DUF642)","Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1","Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_207040 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At5g66520-like [Olea europaea var. sylvestris]","--","--"]
["c102702.graph_c1",33,2,25,1.42,25,1.53,5,0.4,5,0.46,7,0.56,3.81e-06,-2.410000418,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101816.graph_c0",47,2.14,57,2.46,60,2.82,196,10.84,156,11.26,198,11.21,4.4e-11,1.400452638,"up","[D]","Cell cycle control, cell division, chromosome partitioning ","Molecular Function: GTP binding (GO:0005525);; Molecular Function: hydrolase activity (GO:0016787);; ","K03978|1.3e-173|oeu:111390204|K03978 GTP-binding protein | (RefSeq) GTP-binding protein At2g22870","[R]","General function prediction only ","50S ribosome-binding GTPase","GTP-binding protein At2g22870 OS=Arabidopsis thaliana OX=3702 GN=EMB2001 PE=2 SV=2","P-loop containing nucleoside triphosphatehydrolases superfamily protein OS=Striga asiatica OX=4170 GN=STAS_09213 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","GTP-binding protein At2g22870 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c95957.graph_c0",3,0.88,16,3.94,8,2.15,40,10.85,21,6.54,35,9.4,0.009329297,1.390355348,"up","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: magnesium-dependent protein serine/threonine phosphatase activity (GO:0004724);; Molecular Function: metal ion binding (GO:0046872);; ","K17506|2.5e-37|oeu:111388597|K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 11","[T]","Signal transduction mechanisms ","--","Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana OX=3702 GN=At1g43900 PE=2 SV=1","Protein-serine/threonine phosphatase OS=Nicotiana tabacum OX=4097 GN=LOC107762525 PE=3 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 11 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c104883.graph_c0",535,16.86,624,18.61,557,18.09,341,10.98,323,11.91,327,10.48,1.29e-24,-1.108690208,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Molecular Function: enzyme binding (GO:0019899);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: intracellular organelle lumen (GO:0070013);; ","--","[A]","RNA processing and modification ","AAA domain;; SPRY domain","--","SPRY domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_020922 PE=4 SV=1","A","RNA processing and modification","hypothetical protein HYC85_018366 [Camellia sinensis]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422)","--"]
["c100286.graph_c1",23,1.33,32,1.74,33,1.96,5,0.29,7,0.47,11,0.65,2.15e-05,-2.109632041,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115607.graph_c2",23,3.79,37,5.77,31,5.04,4,0.63,3,0.54,6,1.21,1.11e-07,-2.865125815,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108728.graph_c0",74,7.42,94,10.29,84,9.04,12,0.85,22,3.19,28,3.01,7.98e-13,-2.281015764,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103319.graph_c0",70,2.54,84,2.78,76,2.67,492,17.64,398,16.86,487,18.37,1.61e-47,2.241561064,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K09837|2.2e-214|oeu:111404128|K09837 carotenoid epsilon hydroxylase [EC:1.14.14.158] | (RefSeq) carotene epsilon-monooxygenase, chloroplastic","[QI]","--","Cytochrome P450;; Cytochrome P450","Carotene epsilon-monooxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP97C1 PE=1 SV=1","Cytochrome P450 CYP4/CYP19/CYP26 subfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05819 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","carotene epsilon-monooxygenase, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Carotenoid biosynthesis (ko00906)"]
["c117170.graph_c0",163,7.14,139,5.36,153,6.65,92,3.66,84,3.76,99,3.79,8.56e-08,-1.04234799,"down","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K02995|4.7e-41|adu:107464504|K02995 small subunit ribosomal protein S8e | (RefSeq) 40S ribosomal protein S8","--","--","Protein of unknown function (DUF 659)","--","Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020494 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC116001266 [Ipomoea triloba]","molecular function: binding (GO:0005488)","Ribosome (ko03010)"]
["c106220.graph_c0",2347,66.88,2513,67.47,2275,66.61,437,13,466,15.44,560,17.4,1.27e-254,-2.605317343,"down","[P]","Inorganic ion transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Nodulin-like;; Nodulin-like","--","Nodulin-like domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07912 PE=3 SV=1","S","Function unknown","protein NUCLEAR FUSION DEFECTIVE 4-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c89881.graph_c0",0,0,2,0.22,2,0.24,53,5.31,51,6.01,36,3.59,1.53e-10,4.119500993,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113775.graph_c2",294,157.22,293,143.7,255,136.03,140,76.71,111,70.3,142,76.8,5.58e-21,-1.415082842,"down","[I]","Lipid transport and metabolism ","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Molecular Function: enoyl-CoA hydratase activity (GO:0004300);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: fatty acid catabolic process (GO:0009062);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: jasmonic acid metabolic process (GO:0009694);; Biological Process: jasmonic acid biosynthetic process (GO:0009695);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: flower development (GO:0009908);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: organic acid biosynthetic process (GO:0016053);; Biological Process: organic acid catabolic process (GO:0016054);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: carbon-oxygen lyase activity (GO:0016835);; Molecular Function: hydro-lyase activity (GO:0016836);; Biological Process: fatty acid oxidation (GO:0019395);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: reproductive process (GO:0022414);; Cellular Component: cell junction (GO:0030054);; Biological Process: lipid modification (GO:0030258);; Cellular Component: external encapsulating structure (GO:0030312);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: lipid oxidation (GO:0034440);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: hormone biosynthetic process (GO:0042446);; Cellular Component: microbody (GO:0042579);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular lipid catabolic process (GO:0044242);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule catabolic process (GO:0044282);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: carboxylic acid catabolic process (GO:0046395);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Cellular Component: symplast (GO:0055044);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Biological Process: monocarboxylic acid catabolic process (GO:0072329);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: reproductive shoot system development (GO:0090567);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K10527|3.0e-48|oeu:111407897|K10527 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211] | (RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein AIM1","[I]","Lipid transport and metabolism ","--","Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 OS=Arabidopsis thaliana OX=3702 GN=AIM1 PE=1 SV=1","3-hydroxyacyl-CoA dehydrogenase OS=Morella rubra OX=262757 GN=CJ030_MR6G016112 PE=3 SV=1","I","Lipid transport and metabolism","peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: multicellular organismal process (GO:0032501);; cellular component: symplast (GO:0055044);; biological process: biological regulation (GO:0065007)","Fatty acid degradation (ko00071);; alpha-Linolenic acid metabolism (ko00592);; Fatty acid metabolism (ko01212)"]
["c116890.graph_c0",2835,224.18,3236,252.68,2877,240.99,1738,88.32,1594,91.53,1881,95.35,2.25e-76,-1.101796714,"down","--","--","Biological Process: defense response (GO:0006952);; Biological Process: tryptophan catabolic process to kynurenine (GO:0019441);; Molecular Function: heme binding (GO:0020037);; Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","Hs1pro-1 protein C-terminus;; Hs1pro-1 N-terminus","Nematode resistance protein-like HSPRO2 OS=Arabidopsis thaliana OX=3702 GN=HSPRO2 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02364 PE=4 SV=1","S","Function unknown","nematode resistance protein-like HSPRO2 [Sesamum indicum]","biological process: response to stimulus (GO:0050896);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c95783.graph_c0",298,19.58,330,20.8,324,21.88,78,5.94,90,7.34,102,7.38,3.21e-40,-2.126690971,"down","--","--","Molecular Function: zinc ion binding (GO:0008270);; Cellular Component: integral component of membrane (GO:0016021);; ","K16281|8.1e-91|oeu:111375667|K16281 RING-H2 zinc finger protein RHA1 | (RefSeq) E3 ubiquitin-protein ligase RHA1B-like","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; RING-like zinc finger;; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; zinc-RING finger domain;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger;; RING-type zinc-finger","Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1","Anaphase-promoting complex (APC), subunit 11 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07631 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin-protein ligase RHA1B-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c95347.graph_c1",157,6.17,59,2.19,51,2.06,14,0.56,10,0.46,39,1.56,0.001736341,-2.115901327,"down","--","--","Biological Process: malate transport (GO:0015743);; Cellular Component: integral component of membrane (GO:0016021);; ","K03695|8.8e-36|egr:104416563|K03695 ATP-dependent Clp protease ATP-binding subunit ClpB | (RefSeq) chaperone protein ClpB1-like","[R]","General function prediction only ","Aluminium activated malate transporter;; Fusaric acid resistance protein-like","Aluminum-activated malate transporter 10 OS=Arabidopsis thaliana OX=3702 GN=ALMT10 PE=3 SV=2","Putative membrane protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02726 PE=3 SV=1","S","Function unknown","aluminum-activated malate transporter 10-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98438.graph_c1",0,0,3,0.22,2,0.13,47,2.73,43,2.94,51,2.98,1.57e-10,3.926787113,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112758.graph_c0",41,0.83,63,1.38,35,0.79,216,6.46,191,7.19,231,5.26,1.46e-17,1.854894125,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: N-acetyltransferase activity (GO:0008080);; Molecular Function: metal ion binding (GO:0046872);; ","K08343|1.2e-12|zma:103625959|K08343 ubiquitin-like-conjugating enzyme ATG3 | (RefSeq) autophagy-related protein 3","--","--","Tify domain binding domain","Increased DNA methylation 1 OS=Arabidopsis thaliana OX=3702 GN=IDM1 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001023mg PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111394345 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","Autophagy - other (ko04136)"]
["c101678.graph_c0",9,0.45,8,0.38,8,0.41,242,13.25,419,25.99,434,23.43,6.22e-50,4.965364281,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: biological_process (GO:0008150);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to abiotic stimulus (GO:0009628);; Cellular Component: cell junction (GO:0030054);; Cellular Component: external encapsulating structure (GO:0030312);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: response to stimulus (GO:0050896);; Cellular Component: symplast (GO:0055044);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to karrikin (GO:0080167);; ","--","--","--","Phosphate-induced protein 1 conserved region","Protein EXORDIUM-like 3 OS=Arabidopsis thaliana OX=3702 GN=EXL3 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05539 PE=4 SV=1","S","Function unknown","protein EXORDIUM-like 3 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; biological process: response to stimulus (GO:0050896)","--"]
["c96336.graph_c0",19,2,19,1.94,18,1.99,66,6.77,48,5.72,60,6.32,0.000425681,1.264824988,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[U]","Intracellular trafficking, secretion, and vesicular transport ","TLC domain","LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana OX=3702 GN=LAG2 PE=1 SV=1","LAG1 longevity assurance homolog 2-like OS=Nelumbo nucifera OX=4432 GN=LOC104601788 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","LAG1 longevity assurance homolog 2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108948.graph_c0",26,0.58,27,0.57,16,0.37,69,1.58,55,1.46,60,1.37,0.002195983,1.0633121,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112917.graph_c0",0,0,8,0.14,5,0.1,24,0.47,26,0.58,38,0.74,0.000279383,2.179385118,"up","[L]","Replication, recombination and repair ","Molecular Function: ATP binding (GO:0005524);; Biological Process: mismatch repair (GO:0006298);; Molecular Function: mismatched DNA binding (GO:0030983);; ","K08737|0.0e+00|oeu:111399384|K08737 DNA mismatch repair protein MSH6 | (RefSeq) DNA mismatch repair protein MSH7 isoform X1","[L]","Replication, recombination and repair ","MutS domain V;; MutS domain III;; MutS domain I;; MutS domain II","DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana OX=3702 GN=MSH7 PE=1 SV=1","DNA_MISMATCH_REPAIR_2 domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_046236 PE=4 SV=1","L","Replication, recombination and repair","DNA mismatch repair protein MSH7 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)","Mismatch repair (ko03430)"]
["c100035.graph_c0",3656,230.3,4074,241.18,3886,252.32,2460,162.61,2137,160.82,2370,155.42,1.85e-67,-1.059887943,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: transporter activity (GO:0005215);; Molecular Function: gap junction channel activity (GO:0005243);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell-cell junction (GO:0005911);; Cellular Component: gap junction (GO:0005921);; Biological Process: transport (GO:0006810);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: phototransduction (GO:0007602);; Biological Process: phototransduction, visible light (GO:0007603);; Biological Process: behavior (GO:0007610);; Biological Process: visual behavior (GO:0007632);; Biological Process: biological_process (GO:0008150);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: detection of external stimulus (GO:0009581);; Biological Process: detection of abiotic stimulus (GO:0009582);; Biological Process: detection of light stimulus (GO:0009583);; Biological Process: detection of visible light (GO:0009584);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cellular process (GO:0009987);; Biological Process: intercellular transport (GO:0010496);; Molecular Function: channel activity (GO:0015267);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: basolateral plasma membrane (GO:0016323);; Molecular Function: passive transmembrane transporter activity (GO:0022803);; Molecular Function: wide pore channel activity (GO:0022829);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: signaling (GO:0023052);; Cellular Component: cell junction (GO:0030054);; Cellular Component: intrinsic component of membrane (GO:0031224);; Biological Process: multicellular organismal process (GO:0032501);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete plasma membrane part (GO:0044459);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: plasma membrane region (GO:0098590);; ","K22037|1.5e-49|pxb:103942939|K22037 innexin | (RefSeq) innexin inx1-like","--","--","Innexin","ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034910 PE=4 SV=1","C","Energy production and conversion","innexin inx2-like [Rhodamnia argentea]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: behavior (GO:0007610);; biological process: multicellular organismal process (GO:0032501);; cellular component: membrane part (GO:0044425)","--"]
["c38417.graph_c0",20,4.28,24,1.96,26,2.31,0,0,0,0,0,0,1.78e-09,-5.04084371,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108938.graph_c0",52,2.55,31,1.5,28,1.3,460,21.55,396,21.85,458,23.29,2.98e-61,3.207584986,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K15285|6.4e-28|lja:Lj0g3v0084709.1|K15285 solute carrier family 35, member E3 | (RefSeq) Lj0g3v0084709.1; -","[GE]","--","Triose-phosphate Transporter family","UDP-URONIC ACID TRANSPORTER 1 OS=Arabidopsis thaliana OX=3702 GN=UUAT1 PE=1 SV=1","Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20919 PE=4 SV=1","--","--","UDP-URONIC ACID TRANSPORTER 1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100166.graph_c0",430,18.53,415,16.84,372,16.4,98,4.17,89,4.46,98,4.26,6.05e-62,-2.402397613,"down","[I]","Lipid transport and metabolism ","Molecular Function: phospholipase D activity (GO:0004630);; Biological Process: phosphatidic acid biosynthetic process (GO:0006654);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: inositol lipid-mediated signaling (GO:0048017);; Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);; ","K01115|3.2e-237|oeu:111389896|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D zeta 1-like isoform X1","[I]","Lipid transport and metabolism ","PH domain;; Phospholipase D Active site motif","Phospholipase D zeta 1 OS=Arabidopsis thaliana OX=3702 GN=PLDZETA1 PE=1 SV=1","Phospholipase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc21430 PE=3 SV=1","I","Lipid transport and metabolism","phospholipase D zeta 1-like isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)"]
["c116923.graph_c0",149,6.88,189,8.65,153,7.21,591,30.55,516,30.79,645,33.29,3.39e-33,1.504557434,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellulose biosynthetic process (GO:0030244);; ","K20718|6.6e-70|smo:SELMODRAFT_102522|K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) ERb-1; hypothetical protein","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana OX=3702 GN=FEI1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13763 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase FEI 2 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","MAPK signaling pathway - plant (ko04016)"]
["c88453.graph_c0",136,4.98,119,3.92,131,4.72,8,0.31,6,0.31,4,0.16,2.82e-33,-4.543584528,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K00924|1.7e-107|ath:AT4G35600|K00924 kinase [EC:2.7.1.-] | (RefSeq) CST; Protein kinase superfamily protein","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2","Putative serinethreonine-protein kinase cx32, chloroplastic OS=Nicotiana attenuata OX=49451 GN=A4A49_20108 PE=3 SV=1","T","Signal transduction mechanisms","probable serine/threonine-protein kinase PIX13 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c61806.graph_c1",26,6.14,5,1.1,10,2.4,44,10.66,52,14.46,46,11.03,0.00299579,1.387338214,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: pyruvate kinase activity (GO:0004743);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: glycolytic process (GO:0006096);; Cellular Component: chloroplast stroma (GO:0009570);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: potassium ion binding (GO:0030955);; ","K00873|2.4e-70|oeu:111375183|K00873 pyruvate kinase [EC:2.7.1.40] | (RefSeq) plastidial pyruvate kinase 2-like","[G]","Carbohydrate transport and metabolism ","Pyruvate kinase, barrel domain","Plastidial pyruvate kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PKP2 PE=1 SV=1","Pyruvate kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003513mg PE=3 SV=1","G","Carbohydrate transport and metabolism","plastidial pyruvate kinase 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)","Glycolysis / Gluconeogenesis (ko00010);; Purine metabolism (ko00230);; Pyruvate metabolism (ko00620);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c97027.graph_c0",19,1.75,26,2.32,28,2.64,7,0.67,9,0.97,10,1.01,0.000884634,-1.686797846,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c93374.graph_c0",2,0.1,1,0.05,1,0.06,19,1.01,25,1.44,20,1.06,2.74e-05,3.032407697,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: carbonate dehydratase activity (GO:0004089);; Molecular Function: zinc ion binding (GO:0008270);; ","K01674|2.6e-139|oeu:111393484|K01674 carbonic anhydrase [EC:4.2.1.1] | (RefSeq) alpha carbonic anhydrase 7-like","[R]","General function prediction only ","Eukaryotic-type carbonic anhydrase","Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana OX=3702 GN=ACA7 PE=2 SV=1","Carbonic anhydrase OS=Nicotiana attenuata OX=49451 GN=ACA7_1 PE=3 SV=1","P","Inorganic ion transport and metabolism","alpha carbonic anhydrase 7-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","Nitrogen metabolism (ko00910)"]
["c104850.graph_c0",27,0.69,29,0.69,11,0.27,676,17.56,655,19.86,768,19.21,4.34e-110,4.592087506,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K13430|2.5e-96|nta:107764193|K13430 serine/threonine-protein kinase PBS1 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase PBS1-like","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10036 PE=4 SV=1","T","Signal transduction mechanisms","Serine/threonine protein kinase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c117870.graph_c0",280,3.4,256,2.83,210,2.68,637,7.57,783,10.64,909,10.74,2.73e-23,1.315567862,"up","[NW]","--","--","K17592|0.0e+00|sita:101760663|K17592 sacsin | (RefSeq) uncharacterized protein LOC101760663","--","--","--","Protein NO VEIN OS=Arabidopsis thaliana OX=3702 GN=NOV PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_023228 PE=4 SV=1","--","--","hypothetical protein F0562_023228 [Nyssa sinensis]","--","--"]
["c83171.graph_c0",0,0,1,0.06,1,0.04,45,2.44,53,3.31,72,3.86,1.47e-12,4.893364341,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Molecular Function: actin filament binding (GO:0051015);; ","--","--","--","--","Kinase-interacting family protein OS=Arabidopsis thaliana OX=3702 GN=At1g48405 PE=2 SV=1","NAB domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a007985mg PE=4 SV=1","S","Function unknown","kinase-interacting family protein-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c115300.graph_c0",90,4.39,97,4.44,83,4,282,21.82,224,18.51,319,23.42,1.74e-13,1.272891248,"up","--","--","Molecular Function: chromatin binding (GO:0003682);; Molecular Function: metal ion binding (GO:0046872);; ","--","[R]","General function prediction only ","Leucine-zipper of ternary complex factor MIP1;; PHD-finger","Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_011158 PE=4 SV=1","K","Transcription","uncharacterized protein LOC111372560 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c72245.graph_c1",35,7.23,41,7.9,29,6.1,1542,326.04,2265,549.32,2604,545.45,2.58e-83,5.484428491,"up","[S]","Function unknown ","Cellular Component: extracellular region (GO:0005576);; ","K13449|2.0e-94|oeu:111388885|K13449 pathogenesis-related protein 1 | (RefSeq) basic form of pathogenesis-related protein 1-like","[S]","Function unknown ","Cysteine-rich secretory protein family","Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1","Pathogenesis-related protein 1 OS=Bacopa monnieri OX=263974 PE=2 SV=1","S","Function unknown","basic form of pathogenesis-related protein 1-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c102087.graph_c1",2,0.09,0,0,1,0.05,17,0.8,20,1.08,36,1.69,4.39e-06,3.412237205,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112310.graph_c0",60,1.55,76,1.81,57,1.79,24,0.94,19,0.65,20,0.67,9.41e-09,-1.877628694,"down","--","--","Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004324mg PE=4 SV=1","--","--","uncharacterized protein LOC111371543 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100707.graph_c0",20,1.75,32,2.82,23,3.46,77,9.42,44,5.42,87,8.96,0.001574777,1.101597981,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","K08869|1.9e-12|cre:CHLREDRAFT_165812|K08869 aarF domain-containing kinase | (RefSeq) predicted protein","[O]","Posttranslational modification, protein turnover, chaperones ","Myb-like DNA-binding domain;; Myb-like DNA-binding domain","Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00039248001 PE=4 SV=1","K","Transcription","transcription factor DIVARICATA-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c104926.graph_c0",17,2.25,18,1.66,20,2.45,58,5.25,60,7.76,102,10.61,5.92e-06,1.607264222,"up","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Biological Process: tRNA processing (GO:0008033);; Molecular Function: tRNA pseudouridine synthase activity (GO:0106029);; ","K06173|1.6e-75|oeu:111410732|K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] | (RefSeq) uncharacterized protein LOC111410732 isoform X1","[AJ]","--","tRNA pseudouridine synthase","--","tRNA pseudouridine synthase OS=Solanum tuberosum OX=4113 GN=102591350 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111410732 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c106490.graph_c0",17,2.27,17,2.02,23,2.98,55,7.12,61,9.05,68,8.81,0.000213786,1.318281981,"up","--","--","Molecular Function: phenylpyruvate tautomerase activity (GO:0050178);; ","K07253|4.6e-57|oeu:111408036|K07253 phenylpyruvate tautomerase [EC:5.3.2.1] | (RefSeq) macrophage migration inhibitory factor homolog","[V]","Defense mechanisms ","Macrophage migration inhibitory factor (MIF)","--","Macrophage migration inhibitory factor OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25739 PE=3 SV=1","V","Defense mechanisms","macrophage migration inhibitory factor homolog [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360)"]
["c114703.graph_c0",7,0.29,6,0.19,8,0.32,61,2.33,93,3.99,76,2.85,1.87e-12,2.977400978,"up","--","--","Biological Process: reproduction (GO:0000003);; Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: nuclear division (GO:0000280);; Cellular Component: male germ cell nucleus (GO:0001673);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: organelle organization (GO:0006996);; Biological Process: cell cycle (GO:0007049);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: gamete generation (GO:0007276);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: pollen development (GO:0009555);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: cellular process (GO:0009987);; Biological Process: fruit development (GO:0010154);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: cellular component organization (GO:0016043);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: sexual reproduction (GO:0019953);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellular process involved in reproduction in multicellular organism (GO:0022412);; Biological Process: reproductive process (GO:0022414);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: multicellular organism reproduction (GO:0032504);; Cellular Component: protein-containing complex (GO:0032991);; Cellular Component: germ cell nucleus (GO:0043073);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: multi-organism reproductive process (GO:0044703);; Biological Process: gametophyte development (GO:0048229);; Biological Process: male gamete generation (GO:0048232);; Biological Process: organelle fission (GO:0048285);; Biological Process: seed development (GO:0048316);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: multi-organism process (GO:0051704);; Biological Process: generative cell mitosis (GO:0055047);; Biological Process: reproductive system development (GO:0061458);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: mitotic nuclear division (GO:0140014);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: mitotic cell cycle process (GO:1903047);; Cellular Component: transferase complex (GO:1990234);; ","--","--","--","F-box domain","F-box/LRR-repeat protein 17 OS=Arabidopsis thaliana OX=3702 GN=FBL17 PE=1 SV=1","Leucine rich repeat protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01448 PE=4 SV=1","S","Function unknown","F-box/LRR-repeat protein 17 isoform X1 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: organelle (GO:0043226);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704)","--"]
["c112278.graph_c0",115,3.1,116,3.08,100,2.78,12,0.42,23,1.01,21,1.06,1.65e-21,-2.810613364,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein;; Tryptophan/tyrosine permease family","Probable amino acid permease 7 OS=Arabidopsis thaliana OX=3702 GN=AAP7 PE=2 SV=1","probable amino acid permease 7 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104214178 PE=4 SV=1","E","Amino acid transport and metabolism","probable amino acid permease 7 isoform X2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108450.graph_c0",1,0.04,1,0.21,3,3.06,60,8.23,89,15.07,109,13.43,1.3e-16,4.753308244,"up","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","K20723|7.5e-06|cqi:110718799|K20723 reticulon-3 | (RefSeq) reticulon-like protein B11","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Reticulon-like protein B8 OS=Arabidopsis thaliana OX=3702 GN=RTNLB8 PE=2 SV=1","Reticulon-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09889 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","reticulon-like protein B8 [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c102108.graph_c0",16,0.84,14,0.61,14,0.75,177,8.44,174,9.94,219,10.44,3.61e-31,3.292484882,"up","--","--","Biological Process: asymmetric cell division (GO:0008356);; ","--","--","--","--","Protein POLAR-like 1 OS=Arabidopsis thaliana OX=3702 GN=PL1 PE=3 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22616 PE=4 SV=1","S","Function unknown","protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c90227.graph_c0",1127,67.7,1202,68.14,1000,61.76,257,15.83,272,19.2,258,15.75,6.99e-132,-2.39193021,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calcium-dependent phospholipid binding (GO:0005544);; Cellular Component: cytoplasm (GO:0005737);; ","K17098|3.9e-160|oeu:111408872|K17098 annexin D | (RefSeq) annexin D1","[U]","Intracellular trafficking, secretion, and vesicular transport ","Annexin","Annexin Gh1 (Fragment) OS=Gossypium hirsutum OX=3635 GN=AnnGh1 PE=1 SV=2","Annexin OS=Citrus sinensis OX=2711 GN=CISIN_1g035973mg PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","annexin D1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","--"]
["c116488.graph_c2",87,3.1,64,2.16,62,2.28,45,1.64,47,1.96,35,1.27,0.000461327,-1.036560605,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c101826.graph_c0",3,0.19,3,0.2,1,0.05,37,1.83,31,1.8,47,2.08,3.63e-08,3.2923747,"up","--","--","--","K13348|8.0e-07|oeu:111372072|K13348 protein Mpv17 | (RefSeq) uncharacterized protein LOC111372072 isoform X1","[R]","General function prediction only ","--","--","--","--","--","--","--","Peroxisome (ko04146)"]
["c102477.graph_c0",32,1.12,36,1.18,24,0.85,125,4.27,94,3.7,107,3.76,1.06e-07,1.473850756,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K19603|5.0e-09|ppp:112277144|K19603 mitogen-activated protein kinase 15 [EC:2.7.11.24] | (RefSeq) extracellular signal-regulated kinase 2-like isoform X1","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase STN8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STN8 PE=2 SV=1","Protein kinase PCTAIRE OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12930 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase STN8, chloroplastic isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c91340.graph_c0",52,6.69,68,7.6,43,5.55,41,6.3,25,4.53,32,4.88,0.002043891,-1.024249878,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c94736.graph_c0",273,27.04,274,25.89,292,29.71,170,17.48,154,18.08,200,20.97,7.39e-12,-1.001733252,"down","[J]","Translation, ribosomal structure and biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Bacterial PH domain","--","bPH_2 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_15572 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC113751763 [Coffea eugenioides]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105904.graph_c0",75,3.74,124,5.3,110,5.57,28,7.99,32,6.98,40,12.39,9.8e-12,-1.909913304,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[R]","General function prediction only ","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003307mg PE=3 SV=1","S","Function unknown","cleft lip and palate transmembrane protein 1 homolog [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c38162.graph_c0",137,19.9,119,16.23,99,14.72,30,4.46,18,3.07,28,4.13,5.94e-20,-2.496816734,"down","--","--","Molecular Function: translation initiation factor activity (GO:0003743);; Molecular Function: translation elongation factor activity (GO:0003746);; Biological Process: translational frameshifting (GO:0006452);; Molecular Function: ribosome binding (GO:0043022);; Biological Process: positive regulation of translational elongation (GO:0045901);; Biological Process: positive regulation of translational termination (GO:0045905);; ","K03263|3.2e-25|oeu:111398922|K03263 translation initiation factor 5A | (RefSeq) eukaryotic translation initiation factor 5A-2","[J]","Translation, ribosomal structure and biogenesis ","Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold","Eukaryotic translation initiation factor 5A OS=Senecio vernalis OX=93496 GN=EIFSV1 PE=2 SV=1","Eukaryotic translation initiation factor 5A OS=Striga asiatica OX=4170 GN=STAS_28880 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","eukaryotic translation initiation factor 5A-2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c115491.graph_c1",45,1.17,45,0.99,66,1.61,263,6.14,226,6.15,274,6.28,2.16e-21,1.93728903,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Mtf2 family","Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1","Pentatricopeptide repeat protein OS=Salvia miltiorrhiza OX=226208 PE=2 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c117261.graph_c0",236,17.6,288,13.59,250,11.55,619,49.46,706,65.48,748,58.59,3.27e-20,1.097657169,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11252|2.1e-57|sind:105174158|K11252 histone H2B | (RefSeq) histone H2B-like","[B]","Chromatin structure and dynamics ","Core histone H2A/H2B/H3/H4;; Histone-like transcription factor (CBF/NF-Y) and archaeal histone","Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3","Histone H2B OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20550 PE=3 SV=1","B","Chromatin structure and dynamics","histone H2B-like [Sesamum indicum]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c104606.graph_c2",11,0.29,10,0.29,15,0.4,107,2.9,134,3.99,144,3.8,1.16e-19,2.999020103,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K10683|3.7e-70|oeu:111369754|K10683 BRCA1-associated RING domain protein 1 | (RefSeq) BRCA1-associated RING domain protein 1-like isoform X1","[Z]","Cytoskeleton ","Zinc finger, C3HC4 type (RING finger);; zinc finger of C3HC4-type, RING;; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; zinc-RING finger domain;; Ring finger domain","BRCA1-associated RING domain protein 1 OS=Arabidopsis thaliana OX=3702 GN=BARD1 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_022885 PE=4 SV=1","--","--","uncharacterized protein LOC111405086 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Homologous recombination (ko03440)"]
["c104349.graph_c1",48,4.96,48,3.74,53,5.34,186,12.69,154,12.35,172,12.97,4.62e-11,1.437017471,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16736 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111408391 [Olea europaea var. sylvestris]","--","--"]
["c114761.graph_c0",37,2.23,39,1.97,34,2.16,11,1.28,9,1.58,8,1.33,8.67e-07,-2.168846417,"down","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; ","K17604|1.4e-53|aly:110227432|K17604 zinc finger SWIM domain-containing protein 3 | (RefSeq) protein FAR1-RELATED SEQUENCE 5-like","--","--","MULE transposase domain","Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1","Protein FAR1-RELATED SEQUENCE (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_5G036100 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Prunus mume]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c94880.graph_c2",44,4.08,34,2.98,19,1.81,12,1.14,20,2.22,11,1.07,0.002913254,-1.387376042,"down","[R]","General function prediction only ","--","K06911|3.3e-128|oeu:111395758|K06911 quercetin 2,3-dioxygenase [EC:1.13.11.24] | (RefSeq) pirin-like protein","--","--","Pirin C-terminal cupin domain;; Pirin","Pirin-like protein At1g50590 OS=Arabidopsis thaliana OX=3702 GN=At1g50590 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25685 PE=3 SV=1","S","Function unknown","pirin-like protein [Olea europaea var. sylvestris]","--","--"]
["c106928.graph_c2",65,6.12,56,5.13,63,6.21,32,3.09,25,2.76,26,2.49,5.67e-06,-1.434313071,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107455.graph_c1",63,4.93,67,4.96,47,3.79,9,0.73,6,0.56,7,0.62,2.73e-14,-3.161456635,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99193.graph_c0",402,13.47,353,11.38,249,8.47,154,5.3,215,8.64,212,7.2,4.15e-10,-1.092908814,"down","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K05681|5.0e-165|nau:109228191|K05681 ATP-binding cassette, subfamily G (WHITE), member 2 | (RefSeq) ABC transporter G family member 9-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-2 type transporter;; ABC-2 type transporter;; ABC transporter;; ABC transporter","ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=2 SV=2","Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01348 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 21-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","ABC transporters (ko02010)"]
["c112170.graph_c1",34,4.09,31,3.88,26,3.62,110,13.35,89,13.36,128,15.52,6.64e-08,1.486297381,"up","--","--","Molecular Function: MAP kinase activity (GO:0004707);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20600|9.4e-78|oeu:111411714|K20600 mitogen-activated protein kinase 4 [EC:2.7.11.24] | (RefSeq) mitogen-activated protein kinase homolog MMK2-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa OX=3879 GN=MMK2 PE=2 SV=1","Mitogen-activated protein kinase OS=Striga asiatica OX=4170 GN=STAS_22148 PE=3 SV=1","T","Signal transduction mechanisms","mitogen-activated protein kinase homolog MMK2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: signal transducer activity (GO:0004871);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c116786.graph_c0",282,70.13,327,77.4,363,95.31,130,7.53,96,7.83,130,8.96,1.19e-27,-1.766979576,"down","[H]","Coenzyme transport and metabolism ","Molecular Function: coproporphyrinogen oxidase activity (GO:0004109);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K07739|2.9e-184|zju:107418157|K07739 elongator complex protein 3 [EC:2.3.1.48] | (RefSeq) elongator complex protein 3","--","--","Radical SAM superfamily","--","Putative heme chaperone OS=Davidia involucrata OX=16924 GN=Din_048484 PE=3 SV=1","H","Coenzyme transport and metabolism","uncharacterized protein LOC111399480 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c114608.graph_c1",464,6.46,447,5.88,432,5.79,186,2.27,201,3.48,218,3.69,1.94e-32,-1.466792206,"down","--","--","Cellular Component: anaphase-promoting complex (GO:0005680);; Biological Process: metaphase/anaphase transition of mitotic cell cycle (GO:0007091);; Biological Process: anaphase-promoting complex-dependent catabolic process (GO:0031145);; Molecular Function: molecular adaptor activity (GO:0060090);; Biological Process: protein K11-linked ubiquitination (GO:0070979);; ","K03348|0.0e+00|oeu:111389005|K03348 anaphase-promoting complex subunit 1 | (RefSeq) anaphase-promoting complex subunit 1 isoform X1","[DO]","--","Anaphase-promoting complex sub unit 1 C-terminal domain;; Proteasome/cyclosome repeat;; Anaphase-promoting complex subunit 1","Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=APC1 PE=2 SV=1","Anaphase-promoting complex subunit 1 OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000095mg PE=3 SV=1","--","--","anaphase-promoting complex subunit 1 isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Ubiquitin mediated proteolysis (ko04120)"]
["c79715.graph_c0",35,4.89,40,5.25,54,7.72,119,17.02,145,23.78,136,19.31,5.8e-07,1.287219378,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: calcium-dependent protein serine/threonine kinase activity (GO:0009931);; Biological Process: peptidyl-serine phosphorylation (GO:0018105);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: protein autophosphorylation (GO:0046777);; ","K00924|9.5e-49|oeu:111410350|K00924 kinase [EC:2.7.1.-] | (RefSeq) CDPK-related kinase 5-like","[T]","Signal transduction mechanisms ","--","CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003006mg PE=4 SV=1","T","Signal transduction mechanisms","PREDICTED: CDPK-related kinase 5 [Erythranthe guttata]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c106420.graph_c1",17,0.62,9,0.31,12,0.46,36,1.55,45,2.11,43,1.6,0.002528194,1.316252857,"up","--","--","Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; ","K11426|1.9e-255|oeu:111397472|K11426 [histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:2.1.1.354 2.1.1.357] | (RefSeq) histone-lysine N-methyltransferase ASHR1 isoform X1","[B]","Chromatin structure and dynamics ","SET domain;; MYND finger;; Tetratricopeptide repeat","Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana OX=3702 GN=ASHR1 PE=1 SV=2","Putative histone tail methylase containing SET domain OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14389 PE=4 SV=1","B","Chromatin structure and dynamics","histone-lysine N-methyltransferase ASHR1 isoform X4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Lysine degradation (ko00310)"]
["c97174.graph_c0",11156,541.95,12452,573.19,11411,570.8,6760,335.43,5657,321.66,6275,309.7,4.38e-108,-1.227407267,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: lactoylglutathione lyase activity (GO:0004462);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione (GO:0019243);; Molecular Function: metal ion binding (GO:0046872);; ","K01759|3.1e-195|oeu:111410002|K01759 lactoylglutathione lyase [EC:4.4.1.5] | (RefSeq) probable lactoylglutathione lyase, chloroplastic isoform X1","[G]","Carbohydrate transport and metabolism ","Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;; Glyoxalase-like domain","Probable lactoylglutathione lyase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g67280 PE=1 SV=1","Glyoxalase I OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008824mg PE=3 SV=1","G","Carbohydrate transport and metabolism","probable lactoylglutathione lyase, chloroplastic isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Pyruvate metabolism (ko00620)"]
["c111924.graph_c0",6,0.22,6,0.18,14,0.42,41,1.14,27,0.92,31,0.78,0.003525585,1.481667535,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","K23541|5.1e-67|vvi:100265089|K23541 Ca2+/H+ antiporter, TMEM165/GDT1 family | (RefSeq) putative pentatricopeptide repeat-containing protein At3g23330","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E58 PE=3 SV=1","Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_007438 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c94271.graph_c0",6,0.75,9,1.13,7,0.9,60,7.7,121,17.81,152,19.38,3.52e-16,3.413639058,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Protein TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7A OS=Zinnia violacea OX=34245 GN=TED7 PE=2 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_22577 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111376071 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c83256.graph_c0",1217,339.18,1382,358.62,1315,372.09,633,181.04,594,195.14,581,164.45,1.34e-60,-1.431637706,"down","--","--","Molecular Function: metal ion binding (GO:0046872);; ","--","--","--","Metallothionein","Metallothionein-like protein type 2 OS=Actinidia deliciosa OX=3627 GN=pKIWI504 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15442 PE=3 SV=1","S","Function unknown","metallothionein-like protein 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c99804.graph_c0",7,0.69,4,0.37,6,0.61,39,3.96,57,6.64,47,4.74,1.25e-07,2.569269041,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: rRNA processing (GO:0006364);; Biological Process: RNA processing (GO:0006396);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: rRNA metabolic process (GO:0016072);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: preribosome (GO:0030684);; Cellular Component: 90S preribosome (GO:0030686);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: nuclear membrane (GO:0031965);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: envelope (GO:0031975);; Cellular Component: nuclear lumen (GO:0031981);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: protein-containing complex (GO:0032991);; Cellular Component: Pwp2p-containing subcomplex of 90S preribosome (GO:0034388);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: ribosomal small subunit biogenesis (GO:0042274);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete nucleolar part (GO:0044452);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: nucleic acid metabolic process (GO:0090304);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; Cellular Component: ribonucleoprotein complex (GO:1990904);; ","K14556|9.9e-83|oeu:111396055|K14556 U3 small nucleolar RNA-associated protein 12 | (RefSeq) WD repeat-containing protein 3","[A]","RNA processing and modification ","Dip2/Utp12 Family","--","WD40-repeat-containing subunit of the 18S rRNA processing complex OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27849 PE=4 SV=1","A","RNA processing and modification","WD repeat-containing protein 3 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane-enclosed lumen (GO:0031974);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991)","Ribosome biogenesis in eukaryotes (ko03008)"]
["c104468.graph_c1",12,0.76,6,0.37,15,0.9,148,7.84,107,6.53,167,8.96,7.78e-22,3.230715571,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; ","K08241|1.1e-45|oeu:111394433|K08241 jasmonate O-methyltransferase [EC:2.1.1.141] | (RefSeq) jasmonate O-methyltransferase-like isoform X1","--","--","--","Jasmonate O-methyltransferase OS=Brassica rapa subsp. pekinensis OX=51351 GN=JMT PE=1 SV=1","Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D06G010200v1 PE=4 SV=1","S","Function unknown","jasmonate O-methyltransferase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","alpha-Linolenic acid metabolism (ko00592)"]
["c100855.graph_c0",223,16.44,207,14.46,177,13.42,84,6.34,94,8.12,117,8.77,9.55e-14,-1.351982695,"down","[GEPR]","--","Molecular Function: inorganic phosphate transmembrane transporter activity (GO:0005315);; Biological Process: phosphate ion transport (GO:0006817);; Cellular Component: integral component of membrane (GO:0016021);; ","K08176|8.1e-82|oeu:111390556|K08176 MFS transporter, PHS family, inorganic phosphate transporter | (RefSeq) inorganic phosphate transporter 1-4-like","[P]","Inorganic ion transport and metabolism ","Sugar (and other) transporter","Low affinity inorganic phosphate transporter 1 OS=Petunia hybrida OX=4102 GN=PT1 PE=2 SV=1","Phosphate transporter OS=Solanum lycopersicum OX=4081 GN=LePT1 PE=2 SV=1","P","Inorganic ion transport and metabolism","phosphate transporter [Solanum lycopersicum]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98311.graph_c0",1621,81.03,1880,88.84,1675,86.23,915,46.83,736,43.1,947,48.27,6.02e-67,-1.318171048,"down","[C]","Energy production and conversion ","Molecular Function: protein binding (GO:0005515);; ","K07393|3.2e-222|oeu:111393314|K07393 glutathionyl-hydroquinone reductase [EC:1.8.5.7] | (RefSeq) uncharacterized protein LOC111393314","[O]","Posttranslational modification, protein turnover, chaperones ","Glutathione S-transferase, N-terminal domain;; Glutathione S-transferase, C-terminal domain;; Glutathione S-transferase, C-terminal domain","--","GST C-terminal domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_07359 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111393314 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c99353.graph_c0",2,0.22,5,0.53,3,0.34,48,5.4,36,5.37,44,4.9,2.28e-08,3.052362986,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Cellular Component: integral component of membrane (GO:0016021);; ","K10398|6.2e-78|oeu:111371363|K10398 kinesin family member 11 | (RefSeq) kinesin-like protein KIN-5D","[Z]","Cytoskeleton ","--","Kinesin-like protein KIN-5A OS=Oryza sativa subsp. japonica OX=39947 GN=KIN5A PE=2 SV=1","125 kDa kinesin-related protein-like isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104239666 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-5D [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100927.graph_c2",1037,40.13,1003,36.83,971,38.82,7137,285.44,5809,266.84,6580,261.61,7.98e-284,2.370032382,"up","[I]","Lipid transport and metabolism ","Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: integral component of membrane (GO:0016021);; ","K10255|1.0e-241|oeu:111376237|K10255 acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] | (RefSeq) omega-6 fatty acid desaturase, chloroplastic-like","--","--","Fatty acid desaturase","Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus OX=3708 PE=1 SV=1","Plastidial delta-12 oleate desaturase OS=Olea europaea OX=4146 GN=FAD6 PE=2 SV=1","I","Lipid transport and metabolism","omega-6 fatty acid desaturase, chloroplastic-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110096.graph_c0",3092,148.88,3356,150.23,2970,142.9,1397,69.65,1134,61.75,1298,64.67,7.17e-140,-1.619501646,"down","--","--","--","K18643|5.0e-24|gra:105795008|K18643 katanin p80 WD40 repeat-containing subunit B1 | (RefSeq) uncharacterized LOC105795008","--","--","Protein of unknown function (DUF789)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25273 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111398973 [Olea europaea var. sylvestris]","--","--"]
["c114043.graph_c0",136,4.95,177,5.42,138,4.33,573,20.74,810,34.65,838,28.52,8.12e-38,1.971372917,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","K16290|8.0e-198|oeu:111378548|K16290 xylem cysteine proteinase [EC:3.4.22.-] | (RefSeq) cysteine protease XCP2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Papain family cysteine protease;; Cathepsin propeptide inhibitor domain (I29)","Cysteine protease XCP1 OS=Arabidopsis thaliana OX=3702 GN=XCP1 PE=1 SV=1","Cysteine proteinase Cathepsin F OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12700 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","cysteine protease XCP2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c117689.graph_c0",87,1,106,1.15,100,1.17,4,0.06,3,0.06,4,0.06,3.43e-26,-4.743600963,"down","--","--","--","--","[I]","Lipid transport and metabolism ","von Willebrand factor type D domain;; Domain of Unknown Function (DUF1081)","--","--","--","--","--","--","--"]
["c108227.graph_c0",31,4.53,50,4.06,33,3.6,14,3.86,22,4.93,22,3.08,0.0022781,-1.233222414,"down","--","--","--","--","[S]","Function unknown ","--","--","uncharacterized protein LOC107808339 OS=Nicotiana tabacum OX=4097 GN=LOC107808339 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111374225 [Olea europaea var. sylvestris]","--","--"]
["c103569.graph_c3",34,8.55,46,10.79,34,8.68,15,3.78,10,2.88,28,6.96,0.001023904,-1.375095732,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117146.graph_c0",456,118.3,522,119.86,432,112.83,313,82.73,271,83.52,294,74.54,2.93e-18,-1.000383269,"down","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: autophagy (GO:0006914);; ","K08341|1.7e-40|oeu:111368770|K08341 GABA(A) receptor-associated protein | (RefSeq) autophagy-related protein 8f-like","[Z]","Cytoskeleton ","--","Autophagy-related protein 8f OS=Arabidopsis thaliana OX=3702 GN=ATG8F PE=1 SV=1","Autophagy-related protein OS=Coffea canephora OX=49390 GN=GSCOC_T00030444001 PE=3 SV=1","Z","Cytoskeleton","autophagy-related protein 8f-like isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Autophagy - other (ko04136)"]
["c109655.graph_c0",14,0.78,10,0.84,7,0.78,94,4.51,125,6.85,119,5.88,1.75e-17,3.01966532,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_021848 PE=4 SV=1","--","--","uncharacterized protein LOC111369168 [Olea europaea var. sylvestris]","--","--"]
["c96309.graph_c0",26,2.79,57,5.61,33,3.39,10,1.08,22,2.86,25,3.13,0.003699857,-1.270285484,"down","--","--","Molecular Function: translation elongation factor activity (GO:0003746);; Cellular Component: eukaryotic translation elongation factor 1 complex (GO:0005853);; ","K03232|4.0e-48|qsu:111995891|K03232 elongation factor 1-beta | (RefSeq) elongation factor 1-beta-like","[K]","Transcription ","EF-1 guanine nucleotide exchange domain;; Eukaryotic elongation factor 1 beta central acidic region","Elongation factor 1-beta 1 OS=Arabidopsis thaliana OX=3702 GN=At5g12110 PE=2 SV=2","Elongation factor 1-beta OS=Anthurium amnicola OX=1678845 GN=eef1b_4 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","predicted protein [Mycena chlorophos]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","--"]
["c116810.graph_c2",6949,69.2,6897,64.6,6145,62.69,1246,12.83,360,4.16,427,5.07,2.24e-10,-3.336027426,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K01183|3.9e-166|oeu:111402963|K01183 chitinase [EC:3.2.1.14] | (RefSeq) hevamine-A-like","[M]","Cell wall/membrane/envelope biogenesis ","Glycosyl hydrolases family 18;; Glycosyl hydrolases family 18","Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2","Glyco_hydro_18 domain-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_24778 PE=3 SV=1","--","--","hevamine-A-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c116700.graph_c0",75,4.06,91,3.05,101,4.31,47,3.72,47,6.49,40,3.05,1.49e-06,-1.29050338,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020977 PE=4 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Pistacia vera]","--","--"]
["c111294.graph_c1",315,36.75,346,39.07,362,44.94,161,18.6,159,21.84,165,17.9,8.13e-23,-1.392629628,"down","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: mitochondrial envelope (GO:0005740);; Cellular Component: mitochondrial outer membrane (GO:0005741);; Cellular Component: mitochondrial inner membrane (GO:0005743);; Cellular Component: TIM23 mitochondrial import inner membrane translocase complex (GO:0005744);; Biological Process: protein targeting (GO:0006605);; Biological Process: protein targeting to mitochondrion (GO:0006626);; Biological Process: transport (GO:0006810);; Biological Process: mitochondrial transport (GO:0006839);; Biological Process: intracellular protein transport (GO:0006886);; Biological Process: organelle organization (GO:0006996);; Biological Process: mitochondrion organization (GO:0007005);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Biological Process: protein transport (GO:0015031);; Biological Process: peptide transport (GO:0015833);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: protein import (GO:0017038);; Cellular Component: organelle inner membrane (GO:0019866);; Cellular Component: outer membrane (GO:0019867);; Biological Process: protein import into mitochondrial matrix (GO:0030150);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: intrinsic component of membrane (GO:0031224);; Cellular Component: intrinsic component of organelle membrane (GO:0031300);; Cellular Component: integral component of organelle membrane (GO:0031301);; Cellular Component: intrinsic component of mitochondrial inner membrane (GO:0031304);; Cellular Component: integral component of mitochondrial inner membrane (GO:0031305);; Cellular Component: mitochondrial membrane (GO:0031966);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: organelle outer membrane (GO:0031968);; Cellular Component: envelope (GO:0031975);; Cellular Component: integral component of mitochondrial membrane (GO:0032592);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: protein localization to organelle (GO:0033365);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: amide transport (GO:0042886);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete mitochondrial part (GO:0044429);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete mitochondrial membrane part (GO:0044455);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: protein transmembrane import into intracellular organelle (GO:0044743);; Biological Process: establishment of protein localization (GO:0045184);; Biological Process: intracellular transport (GO:0046907);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: cellular localization (GO:0051641);; Biological Process: establishment of localization in cell (GO:0051649);; Biological Process: transmembrane transport (GO:0055085);; Biological Process: intracellular protein transmembrane transport (GO:0065002);; Biological Process: protein localization to mitochondrion (GO:0070585);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: organic substance transport (GO:0071702);; Biological Process: nitrogen compound transport (GO:0071705);; Biological Process: protein transmembrane transport (GO:0071806);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: establishment of protein localization to organelle (GO:0072594);; Biological Process: establishment of protein localization to mitochondrion (GO:0072655);; Cellular Component: intrinsic component of mitochondrial membrane (GO:0098573);; Cellular Component: bounding membrane of organelle (GO:0098588);; Cellular Component: membrane protein complex (GO:0098796);; Cellular Component: mitochondrial protein complex (GO:0098798);; Cellular Component: inner mitochondrial membrane protein complex (GO:0098800);; Cellular Component: whole membrane (GO:0098805);; Biological Process: mitochondrial transmembrane transport (GO:1990542);; ","K17795|4.5e-42|oeu:111379398|K17795 mitochondrial import inner membrane translocase subunit TIM17 | (RefSeq) mitochondrial import inner membrane translocase subunit TIM17-2-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Tim17/Tim22/Tim23/Pmp24 family","Mitochondrial import inner membrane translocase subunit TIM17-2 OS=Arabidopsis thaliana OX=3702 GN=TIM17-2 PE=1 SV=2","Mitochondrial import inner membrane translocase subunit Tim17-B OS=Capsicum chinense OX=80379 GN=BC332_12923 PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import inner membrane translocase subunit TIM17-2-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699)","--"]
["c94731.graph_c1",68,4.41,55,3.42,69,4.55,154,8.13,149,9.48,193,10.17,1.93e-06,1.026515733,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000210mg PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111376122 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97265.graph_c0",11,0.51,21,0.67,10,0.39,72,3.36,87,4.66,77,3.64,7.1e-09,2.102333961,"up","--","--","Cellular Component: host cell nucleus (GO:0042025);; ","K21777|1.7e-221|oeu:111375324|K21777 G2/mitotic-specific cyclin-B, other | (RefSeq) G2/mitotic-specific cyclin S13-7-like isoform X1","[D]","Cell cycle control, cell division, chromosome partitioning ","Cyclin, N-terminal domain;; Cyclin, C-terminal domain","G2/mitotic-specific cyclin-2 OS=Antirrhinum majus OX=4151 PE=2 SV=1","Cyclin N-terminal domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_017644 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","G2/mitotic-specific cyclin S13-7-like isoform X1 [Olea europaea var. sylvestris]","cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c114143.graph_c0",7912,187.54,8536,190.34,8006,195.9,4775,116.55,3914,109.74,4336,105.8,6.54e-98,-1.230896452,"down","[P]","Inorganic ion transport and metabolism ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: ATPase-coupled cation transmembrane transporter activity (GO:0019829);; Biological Process: metal ion transport (GO:0030001);; Molecular Function: metal ion binding (GO:0046872);; ","K17686|3.6e-227|sind:105164606|K17686 P-type Cu+ transporter [EC:7.2.2.8] | (RefSeq) copper-transporting ATPase PAA2, chloroplastic","[P]","Inorganic ion transport and metabolism ","E1-E2 ATPase;; Heavy-metal-associated domain","Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1","Cation transport ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18192 PE=3 SV=1","P","Inorganic ion transport and metabolism","copper-transporting ATPase PAA2, chloroplastic [Sesamum indicum]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","MAPK signaling pathway - plant (ko04016)"]
["c100631.graph_c0",314,9.72,354,10.1,284,8.72,137,4.91,127,5.33,152,6.04,1.12e-25,-1.507544876,"down","--","--","Molecular Function: damaged DNA binding (GO:0003684);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA repair (GO:0006281);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","K10140|7.2e-168|oeu:111390752|K10140 DNA damage-binding protein 2 | (RefSeq) protein DAMAGED DNA-BINDING 2","[S]","Function unknown ","--","DNA damage-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DDB2 PE=1 SV=1","WD_REPEATS_REGION domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_010988 PE=3 SV=1","S","Function unknown","protein DAMAGED DNA-BINDING 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: macromolecular complex (GO:0032991)","Nucleotide excision repair (ko03420);; Ubiquitin mediated proteolysis (ko04120)"]
["c79425.graph_c0",101,9.56,94,8.38,86,8.36,10,0.97,27,3,28,2.7,7.69e-14,-2.363824098,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: glycerol ether metabolic process (GO:0006662);; Molecular Function: protein disulfide oxidoreductase activity (GO:0015035);; Molecular Function: monodehydroascorbate reductase (NADH) activity (GO:0016656);; Biological Process: cell redox homeostasis (GO:0045454);; ","K03671|4.6e-59|oeu:111406390|K03671 thioredoxin 1 | (RefSeq) thioredoxin H2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Thioredoxin","Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2","Thioredoxin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12142 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","thioredoxin H2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c116127.graph_c0",161,6.57,155,6.2,173,7.61,84,4.43,76,3.94,84,4.62,1.19e-11,-1.315342516,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K23288|4.3e-97|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1743 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c91232.graph_c0",6105,427.14,6445,425.62,6009,432.2,2754,197.14,2216,181.68,2693,191.66,3.12e-181,-1.600332382,"down","[VI]","--","Molecular Function: glutathione peroxidase activity (GO:0004602);; Biological Process: response to oxidative stress (GO:0006979);; ","K00432|3.4e-123|oeu:111371812|K00432 glutathione peroxidase [EC:1.11.1.9] | (RefSeq) putative glutathione peroxidase 7, chloroplastic","[O]","Posttranslational modification, protein turnover, chaperones ","Glutathione peroxidase;; AhpC/TSA family;; Redoxin","Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GPX7 PE=3 SV=2","Glutathione peroxidase OS=Davidia involucrata OX=16924 GN=Din_031539 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","putative glutathione peroxidase 7, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754)","Glutathione metabolism (ko00480);; Arachidonic acid metabolism (ko00590)"]
["c99026.graph_c0",4,0.3,3,0.21,2,0.16,19,1.45,21,1.83,25,1.91,0.00053964,2.220495966,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K04077|5.5e-17|cmax:111488761|K04077 chaperonin GroEL | (RefSeq) LOW QUALITY PROTEIN: chaperonin CPN60-like 2, mitochondrial","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1","LEA_2 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20540 PE=4 SV=1","S","Function unknown","NDR1/HIN1-like protein 13 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","RNA degradation (ko03018)"]
["c90934.graph_c0",349,27.54,379,28.04,333,27.21,26,2.09,31,2.85,47,3.75,5.51e-78,-3.63666774,"down","--","--","--","--","[R]","General function prediction only ","Protein of unknown function (DUF1685)","--","Uncharacterized protein (Fragment) OS=Genlisea aurea OX=192259 GN=M569_08616 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111396936 [Olea europaea var. sylvestris]","--","--"]
["c101614.graph_c0",2712,53.9,3061,53.54,2911,63.18,1287,39.68,1058,35.94,1233,37.15,6.38e-120,-1.601966553,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of mitotic cell cycle (GO:0007346);; Biological Process: signal transduction by protein phosphorylation (GO:0023014);; Biological Process: stress-activated protein kinase signaling cascade (GO:0031098);; Biological Process: activation of protein kinase activity (GO:0032147);; ","K20604|1.1e-161|oeu:111405331|K20604 mitogen-activated protein kinase kinase 9 [EC:2.7.12.2] | (RefSeq) mitogen-activated protein kinase kinase 9-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; PPPDE putative peptidase domain","Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MKK9 PE=1 SV=1","Protein kinase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010108mg PE=3 SV=1","T","Signal transduction mechanisms","mitogen-activated protein kinase kinase 9-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896)","MAPK signaling pathway - plant (ko04016)"]
["c99195.graph_c2",45,3.02,50,3.18,48,3.2,16,1.13,16,1.21,27,1.91,2.15e-05,-1.550813074,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: integral component of membrane (GO:0016021);; ","K02183|3.6e-84|oeu:111397933|K02183 calmodulin | (RefSeq) probable calcium-binding protein CML45","[T]","Signal transduction mechanisms ","EF hand;; EF hand;; EF-hand domain;; EF-hand domain pair;; EF-hand domain pair","Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1","Calcium-binding protein CML45 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc30730 PE=4 SV=1","T","Signal transduction mechanisms","probable calcium-binding protein CML45 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Phosphatidylinositol signaling system (ko04070);; Plant-pathogen interaction (ko04626)"]
["c104274.graph_c3",0,0,0,0,0,0,27,1.4,27,1.58,31,1.62,1.82e-08,4.775600901,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","[R]","General function prediction only ","--","Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2","pentatricopeptide repeat-containing protein At1g02150-like OS=Nicotiana tabacum OX=4097 GN=LOC107784609 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g02150-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c115229.graph_c2",287,9.07,278,8.48,276,8.69,174,6.7,147,7.81,172,6.8,3.33e-14,-1.089488264,"down","[R]","General function prediction only ","Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleus (GO:0005634);; Molecular Function: hydrolase activity (GO:0016787);; ","K24104|1.7e-56|dzi:111314468|K24104 GPN-loop GTPase | (RefSeq) GPN-loop GTPase 3-like isoform X1","[K]","Transcription ","Conserved hypothetical ATP binding protein","GPN-loop GTPase QQT1 OS=Arabidopsis thaliana OX=3702 GN=QQT1 PE=1 SV=1","GPN-loop GTPase 3 OS=Corchorus capsularis OX=210143 GN=CCACVL1_22681 PE=3 SV=1","K","Transcription","hypothetical protein CCACVL1_22681 [Corchorus capsularis]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)","--"]
["c113672.graph_c0",198,11.45,206,12.15,216,12.58,62,4.66,67,4.13,105,5.97,2.25e-18,-1.719250552,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111403696 [Olea europaea var. sylvestris]","--","--"]
["c95904.graph_c0",66,5.16,57,4.56,57,4.68,8,2.46,14,5.13,5,1.19,8.13e-13,-2.903195531,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);; Biological Process: glycolytic process (GO:0006096);; ","K01623|1.4e-17|cic:CICLE_v10017877mg|K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | (RefSeq) hypothetical protein","[G]","Carbohydrate transport and metabolism ","Fructose-bisphosphate aldolase class-I","Fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FBA3 PE=1 SV=1","Fructose-bisphosphate aldolase OS=Vitis vinifera OX=29760 GN=FBA3_1 PE=3 SV=1","G","Carbohydrate transport and metabolism","Fructose-bisphosphate aldolase 3, chloroplastic [Vitis vinifera]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Glycolysis / Gluconeogenesis (ko00010);; Pentose phosphate pathway (ko00030);; Fructose and mannose metabolism (ko00051);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c94997.graph_c0",0,0,3,0.17,0,0,17,1.06,34,2.43,29,1.8,1.41e-06,3.559136167,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10398|1.5e-167|oeu:111404047|K10398 kinesin family member 11 | (RefSeq) kinesin-like protein KIN-5C","[Z]","Cytoskeleton ","--","Kinesin-like protein KIN-5C OS=Nicotiana tabacum OX=4097 GN=KIN5C PE=1 SV=1","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24627 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-5C [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c114734.graph_c1",12,0.16,11,0.13,11,0.4,74,1.11,105,2.46,112,1.61,8.78e-14,2.676421159,"up","[C]","Energy production and conversion ","Biological Process: cytokinin metabolic process (GO:0009690);; Molecular Function: cytokinin dehydrogenase activity (GO:0019139);; Molecular Function: FAD binding (GO:0071949);; ","K00279|5.7e-181|oeu:111397162|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 3-like","[C]","Energy production and conversion ","Cytokinin dehydrogenase 1, FAD and cytokinin binding","Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana OX=3702 GN=CKX3 PE=1 SV=1","Cytokinin dehydrogenase OS=Nicotiana tabacum OX=4097 GN=LOC107778197 PE=3 SV=1","C","Energy production and conversion","cytokinin dehydrogenase 3-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Zeatin biosynthesis (ko00908)"]
["c99622.graph_c0",3715,287.53,3766,271.23,3524,275.56,2211,175.97,1859,177.64,2159,171.58,1.84e-91,-1.144286411,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; ","--","--","--","Transcriptional repressor, ovate;; DNA-binding domain","Transcription repressor OFP4 OS=Arabidopsis thaliana OX=3702 GN=OFP4 PE=1 SV=1","AF4/FMR2 family member 1 OS=Theobroma cacao OX=3641 GN=TCM_019730 PE=4 SV=1","S","Function unknown","transcription repressor OFP1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: biological regulation (GO:0065007)","--"]
["c113702.graph_c0",8476,1062.33,9597,1135.71,8838,1130.85,696,116.23,567,101.52,622,99.54,0,-4.153434703,"down","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: integral component of membrane (GO:0016021);; ","K13250|6.7e-13|oeu:111368048|K13250 translocon-associated protein subunit beta | (RefSeq) translocon-associated protein subunit beta-like","[C]","Energy production and conversion ","--","ATP-citrate synthase beta chain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ACLB-2 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014286mg PE=4 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","translocon-associated protein subunit beta-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Protein processing in endoplasmic reticulum (ko04141)"]
["c104000.graph_c0",265,14.26,227,12.07,231,12.92,29,1.67,16,1.15,17,0.91,1.12e-54,-3.802873432,"down","--","--","--","K05391|5.0e-38|mesc:110613637|K05391 cyclic nucleotide gated channel, plant | (RefSeq) putative cyclic nucleotide-gated ion channel 15","--","--","Domain of unknown function (DUF4283)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15503 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111385476 [Olea europaea var. sylvestris]","--","Plant-pathogen interaction (ko04626)"]
["c86957.graph_c1",23,1.11,31,1.34,33,1.51,173,7.45,155,7.63,192,8.21,1.71e-19,2.215014679,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine/tyrosine kinase activity (GO:0004712);; Molecular Function: ATP binding (GO:0005524);; ","K01968|4.8e-169|tcc:18613295|K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] | (RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Fungal protein kinase","Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2","Tyrosine kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07852 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase HT1 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Valine, leucine and isoleucine degradation (ko00280)"]
["c103425.graph_c0",29,3.46,14,1.53,15,1.83,267,36.07,324,47.32,350,43.78,9.82e-47,3.631932566,"up","--","--","Molecular Function: copper ion binding (GO:0005507);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K00423|6.2e-48|atr:18440314|K00423 L-ascorbate oxidase [EC:1.10.3.3] | (RefSeq) L-ascorbate oxidase homolog","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase","L-ascorbate oxidase homolog OS=Brassica napus OX=3708 GN=Bp10 PE=2 SV=1","Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=778302 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","L-ascorbate oxidase homolog [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Ascorbate and aldarate metabolism (ko00053)"]
["c103751.graph_c0",19,0.82,30,1.89,22,1.39,2,0.06,2,0.07,5,0.23,1.43e-06,-2.932864676,"down","--","--","--","--","--","--","--","--","--","--","--","putative G3BP-like protein isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c109587.graph_c0",0,0,1,0.03,0,0,16,0.48,31,1.07,29,0.89,3.02e-07,4.145290396,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","K05605|2.0e-11|oeu:111377319|K05605 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4] | (RefSeq) probable 3-hydroxyisobutyryl-CoA hydrolase 2","--","--","--","--","CCHC-type domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_11652 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC105158097 [Sesamum indicum]","molecular function: binding (GO:0005488)","Valine, leucine and isoleucine degradation (ko00280);; beta-Alanine metabolism (ko00410);; Propanoate metabolism (ko00640);; Carbon metabolism (ko01200)"]
["c113145.graph_c0",15,0.25,6,0.09,6,0.09,75,1.18,93,1.7,134,2.11,1.23e-14,3.016257723,"up","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; Biological Process: transmembrane transport (GO:0055085);; ","K05658|0.0e+00|oeu:111407877|K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2] | (RefSeq) putative ABC transporter B family member 8 isoform X1","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC transporter transmembrane region;; ABC transporter;; RecF/RecN/SMC N terminal domain;; AAA ATPase domain;; Zeta toxin;; AAA domain;; P-loop containing region of AAA domain","Putative ABC transporter B family member 8 OS=Arabidopsis thaliana OX=3702 GN=ABCB8 PE=5 SV=1","Multidrug resistance protein 1, 2, putative OS=Ricinus communis OX=3988 GN=RCOM_1049340 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","putative ABC transporter B family member 8 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c90792.graph_c0",39,3.64,60,5.28,53,5.08,25,2.39,22,2.41,46,4.37,0.004695437,-1.010821727,"down","--","--","--","--","--","--","Rapid ALkalinization Factor (RALF)","Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_003848 PE=3 SV=1","S","Function unknown","protein RALF-like 33 [Olea europaea var. sylvestris]","--","--"]
["c110038.graph_c0",45,0.96,39,0.79,49,1.09,12,1.12,12,1.14,11,1.09,1.13e-07,-2.148535407,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111243.graph_c1",11,0.33,10,0.33,6,0.17,66,2.42,95,3.66,141,10.27,1.96e-14,3.016277289,"up","--","--","--","K01834|4.4e-10|ccaj:109792874|K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] | (RefSeq) uncharacterized protein LOC109792874","--","--","Protein of unknown function (DUF632);; Protein of unknown function (DUF630);; Protein of unknown function (DUF632)","Nitrate regulatory gene2 protein OS=Arabidopsis thaliana OX=3702 GN=NRG2 PE=1 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_14317 PE=4 SV=1","S","Function unknown","nitrate regulatory gene2 protein-like [Olea europaea var. sylvestris]","--","Glycolysis / Gluconeogenesis (ko00010);; Glycine, serine and threonine metabolism (ko00260);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c91798.graph_c0",513,62.74,542,62.6,526,65.88,312,39.18,270,38.93,321,40.01,1.54e-25,-1.129531487,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-(apurinic or apyrimidinic site) endonuclease activity (GO:0003906);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: DNA repair (GO:0006281);; Biological Process: base-excision repair (GO:0006284);; Biological Process: DNA modification (GO:0006304);; Biological Process: DNA alkylation (GO:0006305);; Biological Process: DNA methylation (GO:0006306);; Biological Process: chromatin organization (GO:0006325);; Biological Process: chromatin silencing (GO:0006342);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: organelle organization (GO:0006996);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to fungus (GO:0009620);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: positive regulation of gene expression (GO:0010628);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: negative regulation of organelle organization (GO:0010639);; Biological Process: cellular component organization (GO:0016043);; Biological Process: gene silencing (GO:0016458);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799);; Molecular Function: DNA N-glycosylase activity (GO:0019104);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Biological Process: regulation of chromatin silencing (GO:0031935);; Biological Process: negative regulation of chromatin silencing (GO:0031936);; Biological Process: methylation (GO:0032259);; Biological Process: regulation of organelle organization (GO:0033043);; Biological Process: regulation of chromosome organization (GO:0033044);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: DNA dealkylation (GO:0035510);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: macromolecule methylation (GO:0043414);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: DNA methylation or demethylation (GO:0044728);; Biological Process: negative regulation of gene expression, epigenetic (GO:0045814);; Biological Process: positive regulation of gene expression, epigenetic (GO:0045815);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Biological Process: positive regulation of nucleobase-containing compound metabolic process (GO:0045935);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of cellular component organization (GO:0051128);; Biological Process: negative regulation of cellular component organization (GO:0051129);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: positive regulation of RNA metabolic process (GO:0051254);; Biological Process: chromosome organization (GO:0051276);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of gene silencing (GO:0060968);; Biological Process: negative regulation of gene silencing (GO:0060969);; Biological Process: biological regulation (GO:0065007);; Biological Process: demethylation (GO:0070988);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: DNA demethylation (GO:0080111);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: defense response to other organism (GO:0098542);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: regulation of chromatin organization (GO:1902275);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: positive regulation of RNA biosynthetic process (GO:1902680);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: positive regulation of nucleic acid-templated transcription (GO:1903508);; Biological Process: negative regulation of chromatin organization (GO:1905268);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: negative regulation of cellular macromolecule biosynthetic process (GO:2000113);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; Biological Process: negative regulation of chromosome organization (GO:2001251);; ","--","--","--","--","--","Uracil-DNA glycosylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17161 PE=3 SV=1","L","Replication, recombination and repair","transcriptional activator DEMETER-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)","--"]
["c90099.graph_c0",173,10.57,219,12.43,159,10.68,570,34.88,529,36.3,592,35.15,5.76e-25,1.292676829,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein autophosphorylation (GO:0046777);; ","K01180|1.8e-55|cmax:111487562|K01180 endo-1,3(4)-beta-glucanase [EC:3.2.1.6] | (RefSeq) uncharacterized protein LOC111487562","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1","Protein kinase domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008428mg PE=3 SV=1","T","Signal transduction mechanisms","putative serine/threonine-protein kinase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464)","--"]
["c114916.graph_c0",116,5.53,152,6.28,136,6.87,498,34.93,433,36.6,505,32,1.09e-27,1.498179272,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: catalytic activity (GO:0003824);; ","K09753|6.1e-43|pop:18094265|K09753 cinnamoyl-CoA reductase [EC:1.2.1.44] | (RefSeq) cinnamoyl-CoA reductase 1","[V]","Defense mechanisms ","NAD dependent epimerase/dehydratase family;; 3-beta hydroxysteroid dehydrogenase/isomerase family;; NAD(P)H-binding;; Male sterility protein;; Polysaccharide biosynthesis protein","Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CCR1 PE=1 SV=1","Epimerase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_018247 PE=4 SV=1","V","Defense mechanisms","cinnamoyl-CoA reductase 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Phenylpropanoid biosynthesis (ko00940)"]
["c90295.graph_c0",229,13.16,319,17.32,250,14.8,163,9.59,133,8.96,131,7.72,3.97e-13,-1.210841228,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; ","K22374|8.5e-142|nau:109243613|K22374 3''-deamino-3''-oxonicotianamine reductase [EC:1.1.1.285] | (RefSeq) non-functional NADPH-dependent codeinone reductase 2-like","[R]","General function prediction only ","Aldo/keto reductase family","Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum OX=3469 GN=COR2 PE=1 SV=1","Probable aldo-keto reductase (Fragment) OS=Olea europaea OX=4146 PE=2 SV=1","S","Function unknown","probable aldo-keto reductase, partial [Olea europaea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c108076.graph_c0",305,16.14,132,5.74,113,5.88,109,5.66,81,5.12,70,4.12,0.008596229,-1.304554913,"down","[E]","Amino acid transport and metabolism ","Molecular Function: arylformamidase activity (GO:0004061);; Biological Process: tryptophan catabolic process to kynurenine (GO:0019441);; ","--","--","--","Putative cyclase","Cyclase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CYCLASE3 PE=2 SV=1","kynurenine formamidase-like OS=Nicotiana tabacum OX=4097 GN=LOC107829293 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111388782 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c117504.graph_c0",31,0.64,54,1.35,35,0.85,117,2.34,109,2.22,147,2.84,8.44e-07,1.289223971,"up","--","--","Biological Process: double-strand break repair via homologous recombination (GO:0000724);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: replication fork (GO:0005657);; Molecular Function: DNA-dependent ATPase activity (GO:0008094);; Cellular Component: Rad51B-Rad51C-Rad51D-XRCC2 complex (GO:0033063);; ","K10879|2.2e-168|oeu:111383790|K10879 DNA-repair protein XRCC2 | (RefSeq) DNA repair protein XRCC2 homolog isoform X1","[L]","Replication, recombination and repair ","Rad51;; Acetyltransferase (GNAT) family","DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC2 PE=2 SV=2","DNA repair protein, member of the recA/RAD51 family OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18120 PE=4 SV=1","L","Replication, recombination and repair","F-box/LRR-repeat protein At3g26922-like isoform X2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; cellular component: macromolecular complex (GO:0032991)","Homologous recombination (ko03440)"]
["c105515.graph_c0",2857,106.75,2863,101.14,2649,101.39,1462,59.61,1263,59.26,1326,53.83,4.32e-95,-1.36654579,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Stress up-regulated Nod 19","--","Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07983 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111366462 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108751.graph_c0",5,0.09,8,0.14,9,0.17,84,1.54,119,2.51,144,2.64,3.4e-19,3.492548506,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|4.0e-46|atr:18446750|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 OS=Arabidopsis thaliana OX=3702 GN=PXC3 PE=2 SV=1","Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_019906 PE=4 SV=1","T","Signal transduction mechanisms","leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c77429.graph_c0",0,0,1,0.09,2,0.19,66,6.35,109,12.03,137,13.11,2.6e-18,5.427522905,"up","--","--","--","K12173|3.1e-39|gmx:100794341|K12173 BRCA1-A complex subunit BRE | (RefSeq) BRISC and BRCA1-A complex member 2","--","--","Thaumatin family","Thaumatin-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g18250 PE=2 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27602 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","thaumatin-like protein isoform X3 [Olea europaea var. sylvestris]","--","Homologous recombination (ko03440)"]
["c105389.graph_c4",15,1.84,22,2.29,14,1.62,101,13.51,107,16.94,96,12.37,5.51e-12,2.198890286,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; Biological Process: biosynthetic process (GO:0009058);; ","K00968|1.9e-37|adu:107483732|K00968 choline-phosphate cytidylyltransferase [EC:2.7.7.15] | (RefSeq) choline-phosphate cytidylyltransferase 1","[I]","Lipid transport and metabolism ","Cytidylyltransferase-like","Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 SV=1","CTP_transf_like domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A04g020628 PE=3 SV=1","I","Lipid transport and metabolism","choline-phosphate cytidylyltransferase 1 [Arachis ipaensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Phosphonate and phosphinate metabolism (ko00440);; Glycerophospholipid metabolism (ko00564)"]
["c100395.graph_c0",3660,142.69,3967,145.96,3497,140.35,918,34.66,851,36.42,980,36.1,0,-2.33698638,"down","[C]","Energy production and conversion ","Molecular Function: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity (GO:0003863);; ","K00166|4.8e-145|sind:105180006|K00166 2-oxoisovalerate dehydrogenase E1 component alpha subunit [EC:1.2.4.4] | (RefSeq) 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial isoform X1","[C]","Energy production and conversion ","Dehydrogenase E1 component;; 1-deoxy-D-xylulose-5-phosphate synthase;; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;; Dehydrogenase E1 component","2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g21400 PE=2 SV=1","Branched chain alpha-keto acid dehydrogenase complex, alpha subunit OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14845 PE=4 SV=1","C","Energy production and conversion","Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Valine, leucine and isoleucine degradation (ko00280);; Propanoate metabolism (ko00640)"]
["c114836.graph_c0",49,2,73,2.99,73,2.95,177,7.5,163,7.92,176,7.5,7.48e-07,1.067341576,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","--","--","--","BTB/POZ domain","BTB/POZ domain-containing protein At3g05675 OS=Arabidopsis thaliana OX=3702 GN=At3g05675 PE=2 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_002925 PE=4 SV=1","S","Function unknown","BTB/POZ domain-containing protein At3g05675 isoform X1 [Sesamum indicum]","molecular function: binding (GO:0005488)","--"]
["c101270.graph_c1",1132,62.47,1218,64.69,1048,60.25,522,33.82,388,27.42,577,34.08,1.81e-58,-1.516877394,"down","--","--","--","K07936|7.9e-10|zma:103637360|K07936 GTP-binding nuclear protein Ran | (RefSeq) GTP-binding nuclear protein Ran1B","[L]","Replication, recombination and repair ","DDE superfamily endonuclease;; Plant transposon protein","--","DDE Tnp4 domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_15685 PE=3 SV=1","L","Replication, recombination and repair","protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like isoform X1 [Olea europaea var. sylvestris]","--","Ribosome biogenesis in eukaryotes (ko03008);; RNA transport (ko03013)"]
["c104632.graph_c0",854,27.15,846,25.73,838,27.52,455,15.2,336,12.8,410,13.7,4.69e-45,-1.402120965,"down","--","--","Molecular Function: phosphatidate phosphatase activity (GO:0008195);; ","K15728|1.3e-193|oeu:111379961|K15728 phosphatidate phosphatase LPIN [EC:3.1.3.4] | (RefSeq) phosphatidate phosphatase PAH1-like","[NI]","--","Lipin/Ned1/Smp2 multi-domain protein middle domain;; lipin, N-terminal conserved region","Phosphatidate phosphatase PAH1 OS=Arabidopsis thaliana OX=3702 GN=PAH1 PE=1 SV=1","Phosphatidate phosphatase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_038249 PE=3 SV=1","S","Function unknown","phosphatidate phosphatase PAH1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Glycerolipid metabolism (ko00561);; Glycerophospholipid metabolism (ko00564)"]
["c75680.graph_c0",45,13.41,42,11.4,36,10.73,11,3.29,7,2.41,8,2.37,2.6e-08,-2.427037458,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c100460.graph_c0",60,3.64,41,2.36,27,1.68,136,8.43,129,9.19,149,9.24,2.23e-07,1.349170416,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13241 PE=4 SV=1","--","--","uncharacterized protein LOC111397488 [Olea europaea var. sylvestris]","--","--"]
["c93469.graph_c0",11,2.14,27,4.91,11,2.18,61,12.16,80,18.29,103,20.35,2.14e-07,1.924834505,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","uncharacterized protein LOC108979218 OS=Juglans regia OX=51240 GN=LOC108979218 PE=4 SV=1","--","--","--","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104939.graph_c1",281,14.42,339,16.96,300,15.37,88,5.47,135,8.66,95,5.58,5.44e-24,-1.826276664,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19916 PE=4 SV=1","--","--","uncharacterized protein LOC111396150 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107021.graph_c0",99,2.87,106,2.82,99,2.5,45,1.8,49,2.42,56,2.57,4.25e-08,-1.321344487,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: oxidoreductase activity (GO:0016491);; ","--","[K]","Transcription ","--","AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ARID5 PE=1 SV=1","Putative AT-rich interactive domain-containing protein 5 OS=Davidia involucrata OX=16924 GN=Din_022009 PE=3 SV=1","K","Transcription","AT-rich interactive domain-containing protein 6-like isoform X3 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c112289.graph_c0",4,0.15,11,0.46,7,0.22,164,5.25,144,5.47,165,5.01,1.67e-28,3.951459786,"up","--","--","--","--","--","--","Domain of unknown function (DUF966)","Protein UPSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=UFC PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_026508 PE=4 SV=1","S","Function unknown","protein UPSTREAM OF FLC isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c113199.graph_c3",48,3.43,79,5.01,49,3.14,22,1.62,26,2.21,37,2.47,8.83e-05,-1.328869838,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Biological Process: DNA replication (GO:0006260);; ","K10756|3.4e-36|oeu:111410414|K10756 replication factor C subunit 3/5 | (RefSeq) replication factor C subunit 3-like","--","--","--","--","Replication factor C, subunit RFC3 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17055 PE=4 SV=1","--","--","replication factor C subunit 3-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","DNA replication (ko03030);; Nucleotide excision repair (ko03420);; Mismatch repair (ko03430)"]
["c106709.graph_c0",328,14.04,472,18.43,324,14.28,154,6.57,187,9.24,216,9.4,7.51e-17,-1.320952748,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: intracellular signal transduction (GO:0035556);; Molecular Function: protein-disulfide reductase activity (GO:0047134);; ","K17609|2.1e-165|sind:105165973|K17609 nucleoredoxin [EC:1.8.1.8] | (RefSeq) probable nucleoredoxin 2","[R]","General function prediction only ","Thioredoxin-like;; C1 domain","Probable nucleoredoxin 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0794400 PE=2 SV=1","Putative nucleoredoxin 2 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_026791 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","Thioredoxin, nucleoredoxin [Handroanthus impetiginosus]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c94748.graph_c0",10,0.5,7,0.33,6,0.31,43,2.21,46,2.71,68,3.48,2.6e-07,2.304145995,"up","--","--","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Protein phosphatase 2C family protein (Fragment) OS=Striga asiatica OX=4170 GN=STAS_32016 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105174622 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107637.graph_c0",348,22.27,380,22.87,398,25.64,93,6.26,107,8.16,112,7.44,6.63e-46,-2.161381071,"down","--","--","--","--","--","--","Neprosin activation peptide;; Neprosin","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_007040 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111398831 [Olea europaea var. sylvestris]","--","--"]
["c96846.graph_c0",2,0.27,2,0.25,5,0.68,38,3.22,20,1.94,31,2.61,1.63e-05,2.630483587,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116878.graph_c0",115,2.93,92,1.78,69,2.24,10,0.37,12,1.9,6,0.49,5.87e-21,-3.470062164,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K12447|3.1e-230|thj:104808371|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC104808371","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; GAG-pre-integrase domain;; Integrase core domain","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34107 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c108430.graph_c0",71,3.07,38,1.55,48,2.14,0,0,0,0,1,0.04,4.59e-15,-5.673666509,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K15601|1.7e-33|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","--","--","Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_022845 PE=3 SV=1","L","Replication, recombination and repair","PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform X4 [Daucus carota subsp. sativus]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c100932.graph_c0",11,0.36,13,0.42,4,0.14,22,0.79,43,1.8,40,1.44,0.00335136,1.492022313,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K12309|1.6e-84|lja:Lj3g3v0323160.1|K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) Lj3g3v0323160.1; -","[R]","General function prediction only ","Zinc finger, C2H2 type","Zinc finger protein MAGPIE OS=Arabidopsis thaliana OX=3702 GN=MGP PE=1 SV=1","C2H2 and C2HC zinc fingers superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_008235 PE=4 SV=1","S","Function unknown","zinc finger protein MAGPIE-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Galactose metabolism (ko00052);; Other glycan degradation (ko00511);; Glycosaminoglycan degradation (ko00531);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - ganglio series (ko00604)"]
["c113005.graph_c0",245,10.68,283,11.18,254,10.9,138,6.61,113,6.83,135,5.75,4.99e-18,-1.33388349,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","K01179|2.6e-72|ccav:112521754|K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) uncharacterized protein LOC112521754","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich repeat","--","Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_16134 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111383221 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Starch and sucrose metabolism (ko00500)"]
["c118023.graph_c0",29,7.29,31,7.27,20,5.12,190,49.03,183,54.22,206,52.74,7.81e-25,2.494227698,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116011.graph_c1",34,0.43,42,0.58,36,0.62,219,5.36,240,6.86,245,5.85,1.01e-26,2.303256839,"up","--","--","Biological Process: DNA damage checkpoint (GO:0000077);; Biological Process: telomere maintenance (GO:0000723);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; ","K06640|0.0e+00|oeu:111394196|K06640 serine/threonine-protein kinase ATR [EC:2.7.11.1] | (RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR","[TBLD]","--","FAT domain;; Phosphatidylinositol 3- and 4-kinase;; UME (NUC010) domain;; FATC domain;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain","Serine/threonine-protein kinase ATR OS=Arabidopsis thaliana OX=3702 GN=ATR PE=2 SV=2","Non-specific serine/threonine protein kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a000014mg PE=3 SV=1","--","--","LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c114484.graph_c0",153,2.77,152,2.66,134,2.34,31,2.56,37,1.86,18,0.34,1.18e-23,-2.611554275,"down","--","--","--","--","--","--","--","--","uncharacterized protein LOC109114251 OS=Nelumbo nucifera OX=4432 GN=LOC109114251 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111377113 [Olea europaea var. sylvestris]","--","--"]
["c83137.graph_c0",137,4.97,176,6.04,106,3.96,11,0.41,0,0,0,0,0.008602094,-2.638379613,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","--","--","Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5874 PE=4 SV=1","--","--","--","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c103271.graph_c2",17,1.7,20,2.03,11,1.16,43,4.34,38,4.57,61,6.18,0.00337009,1.185896596,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112926.graph_c0",1,0.07,2,0.14,2,0.15,36,2.73,23,2,35,2.64,3.36e-07,3.345606876,"up","--","--","--","K23288|9.3e-54|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","Retrotransposon gag protein;; gag-polypeptide of LTR copia-type","--","Retrotran_gag_3 domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_031992 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein CK203_031992 [Vitis vinifera]","--","--"]
["c83664.graph_c0",1427,62.34,1637,67.63,1567,70.5,196,8.76,215,11,190,8.45,1.5e-223,-3.256119661,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06522 PE=4 SV=1","--","--","uncharacterized protein LOC111372000 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c112849.graph_c0",20,3.25,19,1.79,17,1.51,2,0.18,1,0.1,3,0.27,6.3e-06,-3.036705253,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111303.graph_c0",3,0.23,4,0.56,5,3.18,144,2.04,146,2.77,163,2.38,9.91e-28,4.641224105,"up","--","--","Biological Process: intracellular protein transport (GO:0006886);; Cellular Component: membrane (GO:0016020);; Biological Process: vesicle-mediated transport (GO:0016192);; ","K15296|1.2e-12|oeu:111399751|K15296 alpha-soluble NSF attachment protein | (RefSeq) alpha-soluble NSF attachment protein-like isoform X1","[U]","Intracellular trafficking, secretion, and vesicular transport ","--","Alpha-soluble NSF attachment protein 2 OS=Arabidopsis thaliana OX=3702 GN=ASNAP2 PE=1 SV=1","TPR_8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05985 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","alpha-soluble NSF attachment protein-like isoform X2 [Olea europaea var. sylvestris]","biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020)","--"]
["c110598.graph_c0",731,26.61,825,28.98,711,27.65,384,14.58,366,15.35,402,15.45,1.95e-42,-1.294652851,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","--","[K]","Transcription ","Bromodomain","Transcription factor GTE6 OS=Arabidopsis thaliana OX=3702 GN=GTE6 PE=2 SV=1","Bromo domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08731 PE=4 SV=1","K","Transcription","uncharacterized protein LOC111409825 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c110594.graph_c1",0,0,0,0,0,0,40,5.01,49,7.04,71,8.84,3.87e-12,5.566081286,"up","--","--","Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","K13065|2.8e-102|oeu:111404591|K13065 shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133] | (RefSeq) spermidine hydroxycinnamoyl transferase-like","--","--","Transferase family","Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana OX=3702 GN=SHT PE=1 SV=1","Spermidine hydroxycinnamoyl transferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_40435 PE=3 SV=1","S","Function unknown","spermidine hydroxycinnamoyl transferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Phenylpropanoid biosynthesis (ko00940);; Flavonoid biosynthesis (ko00941);; Stilbenoid, diarylheptanoid and gingerol biosynthesis (ko00945)"]
["c81817.graph_c0",1,0.05,3,0.15,1,0.05,36,1.95,28,1.73,37,1.99,9.18e-08,3.456503084,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K13229|1.2e-101|sbi:8070754|K13229 2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.11.59] | (RefSeq) DIBOA-glucoside dioxygenase BX6","[QR]","--","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g06620 PE=2 SV=1","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein OS=Striga asiatica OX=4170 GN=STAS_33871 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Benzoxazinoid biosynthesis (ko00402)"]
["c115546.graph_c0",43,0.7,35,0.54,46,0.79,258,4.69,265,5.48,274,4.95,6.24e-30,2.333441695,"up","--","--","--","--","--","--","Domain of unknown function (DUF4378);; DUF761-associated sequence motif","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_007843 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111401049 [Olea europaea var. sylvestris]","--","--"]
["c110279.graph_c0",24,0.82,19,0.68,28,1.11,190,6.34,191,7.33,203,7.34,2.11e-26,2.667805707,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","--","[T]","Signal transduction mechanisms ","OPT oligopeptide transporter protein;; OPT oligopeptide transporter protein;; OPT oligopeptide transporter protein;; OPT oligopeptide transporter protein","Oligopeptide transporter 1 OS=Arabidopsis thaliana OX=3702 GN=OPT1 PE=2 SV=1","Putative Oligopeptide transporter 1 OS=Davidia involucrata OX=16924 GN=Din_041346 PE=3 SV=1","T","Signal transduction mechanisms","hypothetical protein F0562_013492 [Nyssa sinensis]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c105274.graph_c0",32,1.79,22,1.13,25,1.42,57,3.36,85,5.76,103,6.06,0.000120911,1.269722223,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02902|1.5e-91|oeu:111383134|K02902 large subunit ribosomal protein L28 | (RefSeq) 39S ribosomal protein L28, mitochondrial","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal L28 family","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_042533 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","39S ribosomal protein L28, mitochondrial [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c116995.graph_c1",66,5.34,86,6.24,67,5.39,35,2.8,25,2.11,29,1.99,1.09e-07,-1.5816467,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97698.graph_c0",0,0,3,0.35,6,0.65,35,4.24,37,4.97,32,3.59,1.55e-06,2.859549206,"up","--","--","Biological Process: response to auxin (GO:0009733);; ","K14488|4.9e-50|oeu:111375034|K14488 SAUR family protein | (RefSeq) uncharacterized protein LOC111375034","--","--","Auxin responsive protein","Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1","Auxin-induced protein x15 OS=Nicotiana attenuata OX=49451 GN=AXX15_4 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111375034 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c117006.graph_c0",1890,44.26,1845,40.93,1731,41.87,847,20.57,714,19.85,801,19.28,4.64e-100,-1.53161772,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: carbohydrate binding (GO:0030246);; Biological Process: recognition of pollen (GO:0048544);; ","K13416|2.0e-58|bna:106439751|K13416 brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) somatic embryogenesis receptor kinase 4-like isoform X1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; D-mannose binding lectin","G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2","Receptor-like serine/threonine-protein kinase OS=Nicotiana attenuata OX=49451 GN=RLK1_2 PE=3 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c95520.graph_c0",11,0.42,12,0.43,16,0.62,46,1.78,50,2.21,41,1.58,0.000639674,1.424363767,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23877|3.5e-237|oeu:111400864|K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4-like","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana OX=3702 GN=AXY4L PE=2 SV=1","PMR5N domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28477 PE=3 SV=1","S","Function unknown","protein ALTERED XYLOGLUCAN 4-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c60632.graph_c0",89,8.12,79,6.8,56,5.25,47,4.39,49,5.25,26,2.41,0.00026804,-1.149230942,"down","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: dATP phosphohydrolase activity (GO:0102485);; Molecular Function: dCTP phosphohydrolase activity (GO:0102486);; Molecular Function: dUTP phosphohydrolase activity (GO:0102487);; Molecular Function: dTTP phosphohydrolase activity (GO:0102488);; Molecular Function: GTP phosphohydrolase activity (GO:0102489);; Molecular Function: 8-oxo-dGTP phosphohydrolase activity (GO:0102490);; Molecular Function: dGTP phosphohydrolase activity (GO:0102491);; ","K01510|2.2e-104|oeu:111396196|K01510 apyrase [EC:3.6.1.5] | (RefSeq) probable apyrase 6 isoform X1","[F]","Nucleotide transport and metabolism ","GDA1/CD39 (nucleoside phosphatase) family","Probable apyrase 6 OS=Arabidopsis thaliana OX=3702 GN=APY6 PE=2 SV=2","Nucleoside phosphatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10186 PE=3 SV=1","F","Nucleotide transport and metabolism","probable apyrase 6 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Purine metabolism (ko00230);; Pyrimidine metabolism (ko00240)"]
["c97384.graph_c0",194,14.83,201,14.49,192,15.08,90,7.02,67,5.99,92,7.14,1.55e-17,-1.55053217,"down","--","--","--","K03239|1.5e-19|rcu:8276560|K03239 translation initiation factor eIF-2B subunit alpha | (RefSeq) methylthioribose-1-phosphate isomerase","--","--","LURP-one-related","Protein LURP-one-related 8 OS=Arabidopsis thaliana OX=3702 GN=At2g38640 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_029132 PE=3 SV=1","S","Function unknown","protein LURP-one-related 8-like [Olea europaea var. sylvestris]","--","RNA transport (ko03013)"]
["c78461.graph_c0",21,1.86,34,2.83,33,3,14,1.27,15,1.55,16,1.44,0.006125923,-1.223407659,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98099.graph_c0",100,8.73,115,9.34,99,9.04,662,58.16,639,63.1,771,67.21,1.02e-74,2.386981989,"up","--","--","Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K01206|5.6e-57|csat:104750593|K01206 alpha-L-fucosidase [EC:3.2.1.51] | (RefSeq) alpha-L-fucosidase 3-like","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana OX=3702 GN=At1g09390 PE=2 SV=1","Lipase_GDSL domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_003731 PE=3 SV=1","S","Function unknown","GDSL esterase/lipase At1g09390 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824)","Other glycan degradation (ko00511)"]
["c112339.graph_c0",35,2.15,40,2.29,37,2.33,147,8.38,98,6.39,126,7.05,1.11e-07,1.375609105,"up","[R]","General function prediction only ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K00924|4.0e-134|oeu:111394558|K00924 kinase [EC:2.7.1.-] | (RefSeq) CDPK-related protein kinase-like isoform X1","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1","Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101246189 PE=4 SV=1","T","Signal transduction mechanisms","CDPK-related protein kinase-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c85185.graph_c0",84,7.89,92,8.14,75,7.23,300,28.82,347,38.15,314,29.91,1.97e-20,1.609023363,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11251|4.9e-36|oeu:111385130|K11251 histone H2A | (RefSeq) histone H2A","[B]","Chromatin structure and dynamics ","--","Probable histone H2A.1 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1","Histone H2A OS=Capsicum baccatum OX=33114 GN=CQW23_21502 PE=3 SV=1","B","Chromatin structure and dynamics","histone H2A [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c115258.graph_c1",1743,50.03,1833,50.51,1698,51.7,4714,140.94,4280,146.98,4672,135.52,1.66e-80,1.050714612,"up","[IQ]","--","Molecular Function: ligase activity (GO:0016874);; ","K18660|6.2e-174|oeu:111366194|K18660 malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-] | (RefSeq) malonate--CoA ligase","[I]","Lipid transport and metabolism ","AMP-binding enzyme;; AMP-binding enzyme;; AMP-binding enzyme C-terminal domain","Malonate--CoA ligase OS=Arabidopsis thaliana OX=3702 GN=AAE13 PE=1 SV=2","4-coumarate--CoA ligase OS=Fraxinus mandshurica OX=56029 GN=4CL PE=3 SV=1","I","Lipid transport and metabolism","malonate--CoA ligase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Fatty acid biosynthesis (ko00061);; Valine, leucine and isoleucine degradation (ko00280);; Fatty acid metabolism (ko01212)"]
["c117418.graph_c1",168,1.21,169,1.03,128,0.85,415,3.67,368,3.12,383,2.54,3.31e-12,1.002316698,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; ","K04728|0.0e+00|oeu:111368111|K04728 serine-protein kinase ATM [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase ATM isoform X1","[TBLD]","--","Phosphatidylinositol 3- and 4-kinase;; FATC domain","Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana OX=3702 GN=ATM PE=1 SV=1","Non-specific serine/threonine protein kinase OS=Nicotiana sylvestris OX=4096 GN=LOC104223562 PE=4 SV=1","--","--","serine/threonine-protein kinase ATM isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)","Homologous recombination (ko03440)"]
["c96998.graph_c0",11,0.28,7,0.17,12,0.31,35,0.89,39,1.14,53,1.35,0.000237525,1.652411782,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Mitochondrial 28S ribosomal protein S27","Pentatricopeptide repeat-containing protein At1g11710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11710 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_014326 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g11710, mitochondrial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c112073.graph_c0",42,1.29,54,1.6,46,1.46,36,1.13,21,0.78,27,0.86,0.002711244,-1.048554039,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111384781 [Olea europaea var. sylvestris]","--","--"]
["c99339.graph_c2",19,3.42,20,2.84,23,5.94,82,8.04,98,11.11,113,12.12,1.64e-09,1.865568283,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96662.graph_c0",101,8.23,122,9.72,106,9.35,56,4.57,75,7.17,61,4.91,5.85e-06,-1.074771651,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; ","K13993|1.2e-79|oeu:111380496|K13993 HSP20 family protein | (RefSeq) 17.3 kDa class I heat shock protein-like","[O]","Posttranslational modification, protein turnover, chaperones ","Hsp20/alpha crystallin family;; HSP20-like domain found in ArsA","18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1","Putative small heat shock protein OS=Olea europaea OX=4146 GN=hsp18.3 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","17.3 kDa class I heat shock protein-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","Protein processing in endoplasmic reticulum (ko04141)"]
["c103042.graph_c1",144,3.87,172,4.27,143,3.83,93,2.43,93,2.85,98,2.54,1.5e-07,-1.00264013,"down","--","--","Biological Process: chromatin remodeling (GO:0006338);; Cellular Component: Ino80 complex (GO:0031011);; ","K11666|8.2e-177|oeu:111405732|K11666 INO80 complex subunit B | (RefSeq) INO80 complex subunit B-like","--","--","PAPA-1-like conserved region","--","PAPA-1 domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_014723 PE=4 SV=1","S","Function unknown","INO80 complex subunit B-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","--"]
["c107950.graph_c0",53173,1342.62,57454,1372.01,54455,1417.48,14537,407.28,12628,406.33,14488,403.9,0,-2.309649431,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: mRNA binding (GO:0003729);; Molecular Function: catalytic activity (GO:0003824);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: response to cold (GO:0009409);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast (GO:0009507);; Biological Process: response to karrikin (GO:0080167);; ","K06617|0.0e+00|oeu:111385947|K06617 raffinose synthase [EC:2.4.1.82] | (RefSeq) probable galactinol--sucrose galactosyltransferase 6","--","--","Raffinose synthase or seed imbibition protein Sip1;; Raffinose synthase or seed imbibition protein Sip1","Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031178001 PE=3 SV=1","S","Function unknown","probable galactinol--sucrose galactosyltransferase 6 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: response to stimulus (GO:0050896);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Galactose metabolism (ko00052)"]
["c101349.graph_c4",0,0,0,0,2,0.08,26,1.08,28,1.34,26,1.08,3.34e-07,3.863149018,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K10400|4.0e-288|oeu:111388776|K10400 kinesin family member 15 | (RefSeq) kinesin-like protein KIN-12E isoform X1","[Z]","Cytoskeleton ","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1","Kinesin-like protein OS=Striga asiatica OX=4170 GN=STAS_07726 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-12E isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c105689.graph_c0",173,5.3,172,4.95,157,4.85,69,2.1,70,2.21,100,2.72,1.85e-12,-1.38337949,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Cellular Component: cell wall (GO:0005618);; Biological Process: plant-type cell wall organization (GO:0009664);; Cellular Component: membrane (GO:0016020);; ","--","--","--","Plant mobile domain","Protein MAIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=MAIL1 PE=1 SV=1","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_007490 PE=3 SV=1","--","--","uncharacterized protein LOC111408000 isoform X1 [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: membrane (GO:0016020)","--"]
["c109990.graph_c0",462,31.91,495,32.4,451,32.32,110,6.98,129,9.52,122,7.26,6.74e-63,-2.271335905,"down","--","--","--","--","--","--","--","Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ8 PE=2 SV=1","Putative DnaJ protein OS=Davidia involucrata OX=16924 GN=Din_004603 PE=4 SV=1","--","--","chaperone protein dnaJ 8, chloroplastic-like isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c87693.graph_c0",57,8.87,44,6.56,51,8.12,24,3.56,14,2.38,42,6.19,0.000991598,-1.226477013,"down","--","--","--","K10268|3.3e-14|oeu:111379014|K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 4-like","--","--","--","--","F-box/LRR-repeat protein 4-like (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1","S","Function unknown","F-box/LRR-repeat protein 4-like [Olea europaea var. sylvestris]","--","--"]
["c103885.graph_c0",160,15.97,158,12.42,170,20.64,44,4.43,47,6.12,60,7.93,1.1e-20,-1.994474967,"down","--","--","Molecular Function: RNA binding (GO:0003723);; ","--","--","--","Nuclear transport factor 2 (NTF2) domain","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_04565 PE=4 SV=1","A","RNA processing and modification","putative G3BP-like protein isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c77660.graph_c1",124,7.87,128,7.67,131,8.55,624,40.55,586,43.56,719,46.39,8.58e-56,1.99737874,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: membrane (GO:0016020);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: cell periphery (GO:0071944);; ","K19996|2.6e-76|gab:108464152|K19996 phosphatidylinositol transfer protein SFH5 | (RefSeq) patellin-3","[I]","Lipid transport and metabolism ","CRAL/TRIO domain;; CRAL/TRIO, N-terminal domain","Patellin-3 OS=Arabidopsis thaliana OX=3702 GN=PATL3 PE=1 SV=2","Sec14p-like phosphatidylinositol transfer family protein OS=Striga asiatica OX=4170 GN=STAS_14282 PE=3 SV=1","I","Lipid transport and metabolism","patellin-3 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226)","--"]
["c111772.graph_c0",40,3.17,38,2.8,39,3.15,0,0,2,0.18,0,0,9.26e-13,-4.961703153,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115101.graph_c0",512,8.38,550,8.5,465,7.84,1247,22.01,1278,26.78,1486,26.97,1.67e-35,1.069144675,"up","[IQR]","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K08081|1.1e-106|nau:109207232|K08081 tropinone reductase I [EC:1.1.1.206] | (RefSeq) tropinone reductase homolog","[R]","General function prediction only ","bHLH-MYC and R2R3-MYB transcription factors N-terminal;; Enoyl-(Acyl carrier protein) reductase;; short chain dehydrogenase;; KR domain","Tropinone reductase homolog OS=Datura stramonium OX=4076 PE=2 SV=1","BHLH domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14412 PE=4 SV=1","K","Transcription","transcription factor LHW-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Tropane, piperidine and pyridine alkaloid biosynthesis (ko00960)"]
["c109137.graph_c0",4438,83.73,4351,77.9,4099,79.69,2720,52.45,2158,47.85,2684,52.31,1.71e-73,-1.094459026,"down","[E]","Amino acid transport and metabolism ","Molecular Function: serine-type peptidase activity (GO:0008236);; ","K01303|1.2e-06|ppp:112284190|K01303 acylaminoacyl-peptidase [EC:3.4.19.1] | (RefSeq) acylamino-acid-releasing enzyme-like","[O]","Posttranslational modification, protein turnover, chaperones ","Prolyl oligopeptidase family;; Alpha/beta hydrolase family","Probable glutamyl endopeptidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GEP PE=2 SV=2","Peptidase_S9 domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_032712 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable glutamyl endopeptidase, chloroplastic isoform X1 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c112299.graph_c1",12485,361.48,12863,354.42,12074,360.17,7989,236.78,6585,224.01,7730,228.44,9.77e-103,-1.07068362,"down","[C]","Energy production and conversion ","Cellular Component: mitochondrial inner membrane (GO:0005743);; Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137);; Molecular Function: FMN binding (GO:0010181);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NAD binding (GO:0051287);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; Cellular Component: respirasome (GO:0070469);; ","K03942|9.7e-282|oeu:111398857|K03942 NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2] | (RefSeq) NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial","[C]","Energy production and conversion ","Respiratory-chain NADH dehydrogenase 51 Kd subunit;; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region;; SLBB domain","NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08530 PE=1 SV=1","NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21857 PE=3 SV=1","C","Energy production and conversion","NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: membrane part (GO:0044425)","Oxidative phosphorylation (ko00190)"]
["c107809.graph_c0",40,1.92,31,1.34,39,2.51,124,6.86,146,8.67,170,8.68,5.46e-11,1.645356708,"up","[CIR]","--","Molecular Function: L-lactate dehydrogenase activity (GO:0004459);; Cellular Component: peroxisome (GO:0005777);; Molecular Function: glycolate oxidase activity (GO:0008891);; Molecular Function: FMN binding (GO:0010181);; Biological Process: lactate oxidation (GO:0019516);; ","K11517|2.4e-197|oeu:111395787|K11517 (S)-2-hydroxy-acid oxidase [EC:1.1.3.15] | (RefSeq) peroxisomal (S)-2-hydroxy-acid oxidase","[C]","Energy production and conversion ","FMN-dependent dehydrogenase;; IMP dehydrogenase / GMP reductase domain","Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea OX=3562 PE=1 SV=1","(S)-2-hydroxy-acid oxidase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0374381 PE=3 SV=1","C","Energy production and conversion","peroxisomal (S)-2-hydroxy-acid oxidase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987)","Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200);; Peroxisome (ko04146)"]
["c102561.graph_c0",1183,55.84,1307,58.14,1235,60.04,651,31.78,594,32.96,579,28.1,4.48e-54,-1.347577027,"down","--","--","--","--","--","--","Protein of unknown function (DUF1645)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06861 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111381351 [Olea europaea var. sylvestris]","--","--"]
["c86667.graph_c0",75,5.61,97,6.85,87,6.69,714,54.64,578,50.68,630,47.93,2.6e-69,2.554205203,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25025 PE=4 SV=1","--","--","uncharacterized protein LOC111377125 [Olea europaea var. sylvestris]","--","--"]
["c117483.graph_c1",54,1.87,53,0.76,59,1.66,149,6.14,124,5.95,153,8.09,5.72e-06,1.018294226,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13420|7.7e-157|sind:105162156|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase FLS2","--","--","Leucine rich repeat;; Protein kinase domain;; Leucine Rich repeats (2 copies);; Protein tyrosine and serine/threonine kinase;; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13775 PE=3 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c115160.graph_c1",33,0.71,43,0.87,24,0.53,23,0.5,14,0.35,11,0.24,0.003280914,-1.299083867,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108322.graph_c0",5,0.13,0,0,3,0.08,93,2.3,179,5.17,184,4.75,2.83e-24,5.066670873,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06337 PE=4 SV=1","--","--","titin homolog [Olea europaea var. sylvestris]","--","--"]
["c101118.graph_c0",90,5.82,80,4.84,72,4.74,281,18.45,264,19.84,247,16.18,2.35e-14,1.3804724,"up","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: translation (GO:0006412);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: peptide deformylase activity (GO:0042586);; Molecular Function: metal ion binding (GO:0046872);; ","K01462|1.5e-145|oeu:111366177|K01462 peptide deformylase [EC:3.5.1.88] | (RefSeq) peptide deformylase 1A, chloroplastic","[J]","Translation, ribosomal structure and biogenesis ","Polypeptide deformylase","Peptide deformylase 1A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PDF1A PE=2 SV=1","Peptide deformylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17280 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","peptide deformylase 1A, chloroplastic [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488)","--"]
["c97948.graph_c0",465,26.7,447,27.27,350,22.6,13,0.51,2,0.05,1,0.02,3.89e-14,-5.432406159,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell-cell junction (GO:0005911);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Molecular Function: enzyme binding (GO:0019899);; Molecular Function: kinase binding (GO:0019900);; Molecular Function: protein kinase binding (GO:0019901);; Cellular Component: cell junction (GO:0030054);; Cellular Component: organelle membrane (GO:0031090);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: protein histidine kinase binding (GO:0043424);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete vacuolar part (GO:0044437);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: symplast (GO:0055044);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: bounding membrane of organelle (GO:0098588);; Cellular Component: whole membrane (GO:0098805);; ","--","[C]","Energy production and conversion ","SPFH domain / Band 7 family;; SPFH domain / Band 7 family","Hypersensitive-induced response protein-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HIRL2 PE=3 SV=1","SPFH/Band 7/PHB domain-containingmembrane-associated protein family OS=Striga asiatica OX=4170 GN=STAS_01592 PE=4 SV=1","C","Energy production and conversion","hypersensitive-induced response protein-like protein 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044)","--"]
["c114291.graph_c0",78,2.98,78,2.71,53,1.99,237,9.33,193,9.29,250,10.22,1.99e-12,1.364882286,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K08286|3.1e-156|egu:105053948|K08286 protein-serine/threonine kinase [EC:2.7.11.-] | (RefSeq) serine/threonine-protein kinase D6PKL1","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Serine/threonine-protein kinase D6PKL2 OS=Arabidopsis thaliana OX=3702 GN=D6PKL2 PE=1 SV=1","Putative serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04497 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase D6PK [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c105550.graph_c0",599,22.23,671,25.8,612,25.77,86,3.16,60,2.87,108,4.63,1.04e-112,-3.20040734,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K02433|3.1e-38|apro:F751_6020|K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] | (RefSeq) Glutamyl-tRNA(Gln) amidotransferase subunit A","[I]","Lipid transport and metabolism ","CRAL/TRIO domain","Phosphatidylinositol/phosphatidylcholine transfer protein SFH4 OS=Arabidopsis thaliana OX=3702 GN=SFH4 PE=2 SV=1","CRAL-TRIO domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000087270 PE=4 SV=1","I","Lipid transport and metabolism","phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Aminoacyl-tRNA biosynthesis (ko00970)"]
["c113368.graph_c0",225,6.33,221,5.26,164,4.2,573,14.6,532,15.18,656,16.21,4.74e-22,1.202178711,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: protein-cysteine S-palmitoyltransferase activity (GO:0019706);; ","K20027|6.2e-186|oeu:111408332|K20027 palmitoyltransferase ZDHHC1/11 [EC:2.3.1.225] | (RefSeq) probable protein S-acyltransferase 19","[R]","General function prediction only ","DHHC palmitoyltransferase","Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana OX=3702 GN=PAT19 PE=2 SV=1","S-acyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15254 PE=3 SV=1","S","Function unknown","probable protein S-acyltransferase 19 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c105553.graph_c0",17,1.23,15,1.11,18,1.84,41,2.79,40,3.13,55,3.34,0.007243878,1.067584606,"up","--","--","--","K23288|3.5e-49|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","--","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3236 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]","--","--"]
["c95962.graph_c2",53,4.46,53,4.29,57,5.1,4,0.37,2,0.21,2,0.15,5.33e-16,-4.262363119,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1","Nodulin-like domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_011806 PE=3 SV=1","S","Function unknown","protein NUCLEAR FUSION DEFECTIVE 4-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108107.graph_c1",25,0.72,39,1.06,57,1.7,112,3.27,113,3.68,107,2.92,0.000156151,1.104883793,"up","--","--","--","--","[S]","Function unknown ","Neurochondrin;; Neurochondrin","--","Neurochondrin/leucine-rich protein (Neurochondrin) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04139 PE=4 SV=1","S","Function unknown","neurochondrin isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c111248.graph_c0",28,0.82,8,0.21,13,0.37,99,2.77,134,4.68,135,4.03,2.31e-13,2.503688296,"up","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Molecular Function: microtubule binding (GO:0008017);; ","K16732|0.0e+00|oeu:111392438|K16732 protein regulator of cytokinesis 1 | (RefSeq) 65-kDa microtubule-associated protein 3-like","[DZ]","--","Microtubule associated protein (MAP65/ASE1 family)","65-kDa microtubule-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=MAP65-3 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031339 PE=3 SV=1","--","--","65-kDa microtubule-associated protein 3-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488)","--"]
["c108429.graph_c0",618,36.24,661,36.67,521,31.84,1503,100.51,1726,129.75,1979,132.05,2.22e-36,1.20999317,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09338|6.1e-106|oeu:111401171|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein ATHB-6-like isoform X1","[K]","Transcription ","Homeobox associated leucine zipper;; Homeodomain;; Homeobox KN domain","Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1","Homeobox domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036596001 PE=4 SV=1","K","Transcription","homeobox-leucine zipper protein ATHB-6-like isoform X1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c86997.graph_c0",3,0.15,2,0.1,1,0.05,39,2.02,46,2.73,36,1.86,6.41e-09,3.539050335,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","K16221|1.0e-23|nau:109213777|K16221 transcription factor TCP21 (protein CCA1 HIKING EXPEDITION) | (RefSeq) transcription factor TCP7-like","--","--","TCP family transcription factor","Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1","TCP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24632 PE=4 SV=1","K","Transcription","transcription factor TCP20-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","Circadian rhythm - plant (ko04712)"]
["c104319.graph_c3",4,0.23,7,0.37,5,0.31,68,5.1,55,4.82,66,4.84,2.31e-11,3.042866397,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c96897.graph_c0",31,1.92,40,2.55,21,1.55,14,1.33,13,1.46,12,1.08,0.001185224,-1.464283979,"down","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Biological Process: nucleosome assembly (GO:0006334);; Cellular Component: host cell nucleus (GO:0042025);; ","K09422|1.1e-15|oeu:111367821|K09422 transcription factor MYB, plant | (RefSeq) telomere repeat-binding factor 4-like","--","--","Myb-like DNA-binding domain;; gag-polypeptide of LTR copia-type","Telomere repeat-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=At1g17520 PE=2 SV=2","MYB transcription factor OS=Coffea canephora OX=49390 GN=GSCOC_T00021825001 PE=4 SV=1","B","Chromatin structure and dynamics","telomere repeat-binding factor 4-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c88089.graph_c0",390,22.7,449,24.68,397,23.83,221,13.15,214,14.59,200,11.84,4.04e-23,-1.273516864,"down","[S]","Function unknown ","Cellular Component: integral component of membrane (GO:0016021);; ","K02221|3.8e-20|cre:CHLREDRAFT_205830|K02221 YggT family protein | (RefSeq) CCB3; CPLD43 protein required for cyt b6 assembly","--","--","YGGT family","Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB3 PE=1 SV=1","Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc13930 PE=4 SV=1","S","Function unknown","protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106109.graph_c1",197,14.2,135,8.9,183,12.14,503,29.2,521,34.6,473,27.09,6.05e-15,1.210027592,"up","--","--","Molecular Function: G protein-coupled receptor binding (GO:0001664);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: heterotrimeric G-protein complex (GO:0005834);; Biological Process: adenylate cyclase-modulating G protein-coupled receptor signaling pathway (GO:0007188);; Molecular Function: G-protein beta/gamma-subunit complex binding (GO:0031683);; ","K19729|1.3e-91|oeu:111380093|K19729 guanine nucleotide-binding protein G(t) subunit alpha 3 | (RefSeq) guanine nucleotide-binding protein alpha-1 subunit-like isoform X1","[DT]","--","G-protein alpha subunit;; ADP-ribosylation factor family;; G-protein alpha subunit","Guanine nucleotide-binding protein alpha-1 subunit OS=Lotus japonicus OX=34305 GN=GPA1 PE=2 SV=1","Guanine nucleotide-binding protein alpha-1 subunit OS=Vitis vinifera OX=29760 GN=GPA1_2 PE=3 SV=1","--","--","guanine nucleotide-binding protein alpha-1 subunit-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c112704.graph_c0",408,11.69,378,10.15,369,10.78,962,28.39,1011,34.01,1143,33.34,2.26e-30,1.105901664,"up","--","--","Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: polysaccharide biosynthetic process (GO:0000271);; Biological Process: mitotic cell cycle (GO:0000278);; Biological Process: mitotic cytokinesis (GO:0000281);; Biological Process: cytokinesis (GO:0000910);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: Golgi apparatus (GO:0005794);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: polysaccharide metabolic process (GO:0005976);; Biological Process: cellular glucan metabolic process (GO:0006073);; Biological Process: organelle organization (GO:0006996);; Biological Process: cytoskeleton organization (GO:0007010);; Biological Process: microtubule-based process (GO:0007017);; Biological Process: cell cycle (GO:0007049);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: glucan biosynthetic process (GO:0009250);; Biological Process: multidimensional cell growth (GO:0009825);; Biological Process: plant-type cell wall biogenesis (GO:0009832);; Biological Process: plant-type primary cell wall biogenesis (GO:0009833);; Biological Process: cellular process (GO:0009987);; Cellular Component: cellulose synthase complex (GO:0010330);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: carbohydrate biosynthetic process (GO:0016051);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758);; Molecular Function: cellulose synthase activity (GO:0016759);; Molecular Function: cellulose synthase (UDP-forming) activity (GO:0016760);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellulose metabolic process (GO:0030243);; Biological Process: cellulose biosynthetic process (GO:0030244);; Biological Process: cortical cytoskeleton organization (GO:0030865);; Biological Process: cytoplasmic microtubule organization (GO:0031122);; Cellular Component: intrinsic component of membrane (GO:0031224);; Cellular Component: intrinsic component of plasma membrane (GO:0031226);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular polysaccharide biosynthetic process (GO:0033692);; Biological Process: cellular carbohydrate biosynthetic process (GO:0034637);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: growth (GO:0040007);; Biological Process: cell wall biogenesis (GO:0042546);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cortical microtubule organization (GO:0043622);; Biological Process: glucan metabolic process (GO:0044042);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: cellular polysaccharide metabolic process (GO:0044264);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete plasma membrane part (GO:0044459);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: glucosyltransferase activity (GO:0046527);; Biological Process: beta-glucan metabolic process (GO:0051273);; Biological Process: beta-glucan biosynthetic process (GO:0051274);; Biological Process: cell division (GO:0051301);; Biological Process: cytoskeleton-dependent cytokinesis (GO:0061640);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: plant-type cell wall organization or biogenesis (GO:0071669);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Biological Process: supramolecular fiber organization (GO:0097435);; Biological Process: organic substance biosynthetic process (GO:1901576);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: mitotic cell cycle process (GO:1903047);; Cellular Component: transferase complex (GO:1990234);; ","K10999|0.0e+00|oeu:111408762|K10999 cellulose synthase A [EC:2.4.1.12] | (RefSeq) cellulose synthase A catalytic subunit 2 [UDP-forming]-like","--","--","Cellulose synthase;; Zinc-binding RING-finger;; Cellulose synthase","Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA2 PE=1 SV=1","Cellulose synthase OS=Paulownia fortunei OX=586722 GN=CesA2 PE=2 SV=1","G","Carbohydrate transport and metabolism","cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: growth (GO:0040007);; cellular component: macromolecular complex (GO:0032991)","--"]
["c108034.graph_c1",37,1.78,28,0.91,45,1.82,109,4.95,69,3.77,133,6.05,0.000163077,1.127566868,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; ","K09184|3.5e-28|vvi:104879571|K09184 GATA-binding protein, other eukaryote | (RefSeq) GATA transcription factor 8","[K]","Transcription ","GATA zinc finger","GATA transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=GATA8 PE=1 SV=1","GATA transcription factor OS=Davidia involucrata OX=16924 GN=Din_005192 PE=3 SV=1","K","Transcription","GATA transcription factor 8-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","--"]
["c113046.graph_c1",198,4.79,124,3.06,103,2.52,38,1.01,57,1.97,43,1.31,3.28e-12,-1.893815462,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K21989|7.4e-216|oeu:111375854|K21989 calcium permeable stress-gated cation channel | (RefSeq) CSC1-like protein At4g02900 isoform X1","[R]","General function prediction only ","Late exocytosis, associated with Golgi transport;; Cytosolic domain of 10TM putative phosphate transporter;; Calcium-dependent channel, 7TM region, putative phosphate","CSC1-like protein At4g02900 OS=Arabidopsis thaliana OX=3702 GN=At4g02900 PE=3 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09146 PE=3 SV=1","S","Function unknown","CSC1-like protein At4g02900 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99778.graph_c0",101,2.53,45,1.07,44,1.14,51,1.31,27,0.79,35,0.89,0.004825138,-1.039139709,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27467 PE=4 SV=1","--","--","uncharacterized protein LOC111372412 [Olea europaea var. sylvestris]","--","--"]
["c115567.graph_c1",29,0.69,34,1.1,11,0.2,64,1.62,48,1.91,89,1.95,0.0042108,1.076726474,"up","[L]","Replication, recombination and repair ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: chromatin binding (GO:0003682);; Molecular Function: DNA (cytosine-5-)-methyltransferase activity (GO:0003886);; Cellular Component: nucleus (GO:0005634);; ","K00558|8.7e-139|oeu:111388236|K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] | (RefSeq) DNA (cytosine-5)-methyltransferase 1B-like","--","--","C-5 cytosine-specific DNA methylase;; BAH domain;; C-5 cytosine-specific DNA methylase;; BAH domain","DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica OX=39947 GN=MET1A PE=2 SV=1","DNA (cytosine-5)-methyltransferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_21968 PE=3 SV=1","B","Chromatin structure and dynamics","DNA (cytosine-5)-methyltransferase [Dorcoceras hygrometricum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Cysteine and methionine metabolism (ko00270)"]
["c117390.graph_c0",13,0.68,6,0.31,16,0.81,30,1.7,38,2.42,43,2.39,0.007588962,1.254717656,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_27691 PE=4 SV=1","--","--","equilibrative nucleotide transporter 3-like [Quercus suber]","--","--"]
["c101935.graph_c0",41,1.4,50,1.63,56,2.02,137,4.77,131,5.18,162,5.63,2.63e-07,1.202990741,"up","--","--","--","--","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; Pentatricopeptide repeat domain;; PPR repeat","Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1","Pentatricopeptide repeat-containing protein mitochondrial OS=Dorcoceras hygrometricum OX=472368 GN=F511_05060 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Olea europaea var. sylvestris]","--","--"]
["c107940.graph_c0",315,15.96,291,13.92,264,13.61,83,2.97,95,4.51,101,3.86,3.85e-33,-1.947548003,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: regulation of abscisic acid-activated signaling pathway (GO:0009787);; Biological Process: positive regulation of abscisic acid-activated signaling pathway (GO:0009789);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: positive regulation of signal transduction (GO:0009967);; Biological Process: cellular process (GO:0009987);; Biological Process: proteasomal protein catabolic process (GO:0010498);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: positive regulation of cell communication (GO:0010647);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity (GO:0016740);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: positive regulation of signaling (GO:0023056);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Biological Process: protein modification process (GO:0036211);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: regulation of response to osmotic stress (GO:0047484);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: positive regulation of response to stimulus (GO:0048584);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Molecular Function: ubiquitin protein ligase activity (GO:0061630);; Molecular Function: ubiquitin-like protein ligase activity (GO:0061659);; Biological Process: biological regulation (GO:0065007);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of response to stress (GO:0080134);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: regulation of response to alcohol (GO:1901419);; Biological Process: positive regulation of response to alcohol (GO:1901421);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: regulation of cellular response to alcohol (GO:1905957);; Biological Process: positive regulation of cellular response to alcohol (GO:1905959);; ","K16285|1.7e-74|oeu:111395311|K16285 RING/U-box domain-containing protein [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase XERICO","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Anaphase-promoting complex subunit 11 RING-H2 finger","Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1","RING-H2 type zinc finger OS=Avicennia marina OX=82927 GN=RZFP1 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable E3 ubiquitin-protein ligase XERICO [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c90517.graph_c0",911,41.73,939,40.67,906,43.52,480,22.48,435,23.34,502,23.4,5.68e-50,-1.281393549,"down","[CHR]","--","Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: NAD binding (GO:0051287);; ","K15893|6.4e-216|oeu:111412189|K15893 glycerate dehydrogenase [EC:1.1.1.29] | (RefSeq) glycerate dehydrogenase HPR, peroxisomal","[C]","Energy production and conversion ","D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain","Glycerate dehydrogenase HPR, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=HPR PE=1 SV=1","Putative glycerate dehydrogenase HPR, peroxisomal OS=Davidia involucrata OX=16924 GN=Din_018641 PE=3 SV=1","C","Energy production and conversion","glycerate dehydrogenase HPR, peroxisomal [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Glycine, serine and threonine metabolism (ko00260);; Glyoxylate and dicarboxylate metabolism (ko00630);; Carbon metabolism (ko01200)"]
["c116903.graph_c0",687,32.66,736,32.17,604,29.5,2140,99.89,1838,97.72,2199,100.91,3.65e-69,1.282721783,"up","--","--","--","K15559|9.9e-248|oeu:111394810|K15559 regulator of Ty1 transposition protein 103 | (RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1","[A]","RNA processing and modification ","CID domain","--","CID domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_005630 PE=4 SV=1","A","RNA processing and modification","regulation of nuclear pre-mRNA domain-containing protein 1B-like isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c107046.graph_c0",57,1.4,51,1.36,50,1.25,184,4.68,194,6.26,232,5.79,8.73e-15,1.605497255,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: potassium ion transmembrane transporter activity (GO:0015079);; Cellular Component: integral component of membrane (GO:0016021);; ","K03549|2.5e-197|oeu:111399178|K03549 KUP system potassium uptake protein | (RefSeq) probable potassium transporter 17 isoform X1","--","--","K+ potassium transporter;; K+ potassium transporter","Probable potassium transporter 17 OS=Oryza sativa subsp. japonica OX=39947 GN=HAK17 PE=2 SV=2","Potassium transporter OS=Davidia involucrata OX=16924 GN=Din_044786 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable potassium transporter 17 isoform X1 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116191.graph_c0",2,0.21,14,1.35,2,0.21,31,3.4,39,7.39,27,4.19,0.000856428,1.938186313,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","gag-polypeptide of LTR copia-type","--","Integrase catalytic domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_1222S000100 PE=4 SV=1","--","--","PREDICTED: uncharacterized protein LOC105108210 [Populus euphratica]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c81397.graph_c0",0,0,0,0,0,0,38,3.64,32,3.51,27,2.57,3.71e-09,4.943441928,"up","--","--","Molecular Function: phospholipase D activity (GO:0004630);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: membrane (GO:0016020);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: phosphatidylcholine metabolic process (GO:0046470);; Molecular Function: N-acylphosphatidylethanolamine-specific phospholipase D activity (GO:0070290);; ","K01115|8.0e-27|oeu:111368181|K01115 phospholipase D1/2 [EC:3.1.4.4] | (RefSeq) phospholipase D alpha 1-like isoform X1","[U]","Intracellular trafficking, secretion, and vesicular transport ","Armadillo/beta-catenin-like repeat","Importin subunit alpha-1a OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0253300 PE=1 SV=2","Phospholipase D OS=Dorcoceras hygrometricum OX=472368 GN=F511_14412 PE=3 SV=1","I","Lipid transport and metabolism","putative late blight resistance protein homolog R1A-3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Glycerophospholipid metabolism (ko00564);; Ether lipid metabolism (ko00565);; Endocytosis (ko04144)"]
["c98115.graph_c0",1,0.05,2,0.1,1,0.05,42,2.19,41,2.45,44,2.32,6.07e-10,3.992983061,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: O-acyltransferase activity (GO:0008374);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Membrane bound O-acyl transferase family","Acyl-CoA--sterol O-acyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=ASAT1 PE=1 SV=1","MBOAT_2 domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00017886001 PE=3 SV=1","S","Function unknown","acyl-CoA--sterol O-acyltransferase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c91465.graph_c0",482,20.47,440,17.68,435,19.03,130,5.65,120,5.99,142,6.14,1.92e-56,-2.105977733,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22950|8.0e-108|fve:101295404|K22950 acylphloroglucinol glucosyltransferase [EC:2.4.1.358] | (RefSeq) anthocyanidin 3-O-glucosyltransferase 2-like","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","Putative UDP-glucose flavonoid 3-O-glucosyltransferase 3 OS=Fragaria ananassa OX=3747 GN=GT3 PE=2 SV=1","Glycosyltransferase OS=Forsythia intermedia OX=55183 GN=RengUGT11 PE=2 SV=1","--","--","UDP-sugar:glycosyltransferase [Forsythia x intermedia]","molecular function: catalytic activity (GO:0003824)","--"]
["c104686.graph_c1",1803,125.37,1917,126.63,1861,131.34,1079,54.53,875,49.37,1070,55.28,4.33e-64,-1.208620252,"down","[H]","Coenzyme transport and metabolism ","Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729);; Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124);; ","K01724|2.9e-105|oeu:111380119|K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] | (RefSeq) uncharacterized protein LOC111380119","--","--","Pterin 4 alpha carbinolamine dehydratase;; Zinc finger, C3HC4 type (RING finger)","Probable pterin-4-alpha-carbinolamine dehydratase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATP1 PE=1 SV=1","4a-hydroxytetrahydrobiopterin dehydratase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00314 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111380119 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","Folate biosynthesis (ko00790)"]
["c98357.graph_c0",0,0,4,0.09,10,0.24,140,6.59,122,6.66,119,5.67,1.8e-06,3.587507104,"up","--","--","Biological Process: response to red or far red light (GO:0009639);; Biological Process: negative gravitropism (GO:0009959);; ","--","--","--","--","--","DUF641 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05861 PE=4 SV=1","S","Function unknown","protein GRAVITROPIC IN THE LIGHT 1-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c117662.graph_c0",1054,11.98,1067,11.22,926,10.26,305,3.04,253,2.87,326,3.23,3.59e-111,-2.104521661,"down","--","--","Biological Process: in utero embryonic development (GO:0001701);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Biological Process: regulation of DNA replication (GO:0006275);; Biological Process: mRNA processing (GO:0006397);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: embryo development (GO:0009790);; Biological Process: embryo development ending in birth or egg hatching (GO:0009792);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: protein ubiquitination (GO:0016567);; Cellular Component: nuclear body (GO:0016604);; Cellular Component: nuclear speck (GO:0016607);; Molecular Function: transferase activity (GO:0016740);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Molecular Function: enzyme binding (GO:0019899);; Molecular Function: kinase binding (GO:0019900);; Molecular Function: protein kinase binding (GO:0019901);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: multicellular organism growth (GO:0035264);; Biological Process: protein modification process (GO:0036211);; Biological Process: growth (GO:0040007);; Biological Process: chordate embryonic development (GO:0043009);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete nucleoplasm part (GO:0044451);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: animal organ development (GO:0048513);; Biological Process: embryonic organ development (GO:0048568);; Biological Process: developmental growth (GO:0048589);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of DNA metabolic process (GO:0051052);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: epithelium development (GO:0060429);; Biological Process: somite development (GO:0061053);; Molecular Function: ubiquitin protein ligase activity (GO:0061630);; Molecular Function: ubiquitin-like protein ligase activity (GO:0061659);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; ","K10624|4.8e-10|csat:104723361|K10624 E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Zinc knuckle;; DWNN domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger)","E3 ubiquitin ligase PARAQUAT TOLERANCE 3 OS=Arabidopsis thaliana OX=3702 GN=PQT3 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28808 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like isoform X1 [Olea europaea var. sylvestris]","biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: macromolecular complex (GO:0032991);; biological process: growth (GO:0040007)","--"]
["c114220.graph_c0",3231,129.64,3445,129.4,3197,133.58,1968,82.43,1671,79.67,1825,77.97,1.73e-81,-1.17485937,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: amidase activity (GO:0004040);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: indoleacetic acid metabolic process (GO:0009683);; Biological Process: indoleacetic acid biosynthetic process (GO:0009684);; Biological Process: auxin metabolic process (GO:0009850);; Biological Process: auxin biosynthetic process (GO:0009851);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: organic acid biosynthetic process (GO:0016053);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810);; Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (GO:0016811);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular hormone metabolic process (GO:0034754);; Biological Process: indole-containing compound metabolic process (GO:0042430);; Biological Process: indole-containing compound biosynthetic process (GO:0042435);; Biological Process: hormone metabolic process (GO:0042445);; Biological Process: hormone biosynthetic process (GO:0042446);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: oxoacid metabolic process (GO:0043436);; Molecular Function: indoleacetamide hydrolase activity (GO:0043864);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K01426|1.7e-119|oeu:111368633|K01426 amidase [EC:3.5.1.4] | (RefSeq) amidase 1-like","[J]","Translation, ribosomal structure and biogenesis ","Amidase;; Amidase","Amidase 1 OS=Arabidopsis thaliana OX=3702 GN=AMI1 PE=1 SV=1","Amidase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_019881 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","amidase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","Arginine and proline metabolism (ko00330);; Phenylalanine metabolism (ko00360);; Tryptophan metabolism (ko00380)"]
["c116816.graph_c1",96,6.57,151,10.41,102,6.93,321,23.61,270,22.81,300,22.04,3.17e-09,1.025593081,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: iron ion binding (GO:0005506);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Molecular Function: iron-sulfur cluster binding (GO:0051536);; ","K22074|1.4e-16|egu:105057313|K22074 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | (RefSeq) nifU-like protein 1, chloroplastic","[O]","Posttranslational modification, protein turnover, chaperones ","NifU-like domain;; NifU-like domain","NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_035839 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","nifU-like protein 3, chloroplastic isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c107631.graph_c0",9,0.26,1,0.03,7,0.2,88,2.55,66,2.19,72,2.08,8.58e-13,3.202847326,"up","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K05849|3.9e-116|tcc:18613571|K05849 solute carrier family 8 (sodium/calcium exchanger) | (RefSeq) uncharacterized LOC18613571","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; DYW family of nucleic acid deaminases;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1","DYW_deaminase domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041318 PE=3 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At5g48910-like [Camellia sinensis]","molecular function: binding (GO:0005488)","--"]
["c116118.graph_c0",902,26.26,828,21.75,775,22.54,147,4.34,142,4.35,159,5.16,3.28e-134,-2.79615552,"down","--","--","Biological Process: auxin-activated signaling pathway (GO:0009734);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","K13947|7.8e-304|oeu:111373998|K13947 auxin efflux carrier family protein | (RefSeq) probable auxin efflux carrier component 1b","--","--","Membrane transport protein","Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1","Auxin efflux carrier component OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07380 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable auxin efflux carrier component 1b [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c80697.graph_c0",46,2.51,31,1.61,35,1.96,184,9.99,206,12.71,228,12.4,2.33e-20,2.11022811,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K07760|1.6e-173|oeu:111393253|K07760 cyclin-dependent kinase [EC:2.7.11.22] | (RefSeq) cell division control protein 2 homolog D-like","[R]","General function prediction only ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Cell division control protein 2 homolog D OS=Antirrhinum majus OX=4151 GN=CDC2D PE=2 SV=1","Cyclin-dependent kinase OS=Striga asiatica OX=4170 GN=STAS_08053 PE=3 SV=1","T","Signal transduction mechanisms","cell division control protein 2 homolog D-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c89759.graph_c0",66,4.33,76,4.74,77,5.47,187,9.55,172,10.34,228,11.79,3.69e-08,1.082899144,"up","--","--","Biological Process: defense response (GO:0006952);; ","K10781|3.1e-07|psom:113347984|K10781 fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.21] | (RefSeq) uncharacterized protein LOC113347984 isoform X1","--","--","Pathogenesis-related protein Bet v 1 family","Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1","MLP-like protein 34-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_44565 PE=4 SV=1","S","Function unknown","kirola-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","Fatty acid biosynthesis (ko00061);; Fatty acid metabolism (ko01212)"]
["c106610.graph_c1",5325,246.14,5953,257.29,5497,257.88,1330,55.56,1019,48.23,1221,51.23,0,-2.554247117,"down","[E]","Amino acid transport and metabolism ","Molecular Function: proline dehydrogenase activity (GO:0004657);; Biological Process: proline catabolic process (GO:0006562);; ","K00318|6.0e-165|oeu:111367908|K00318 proline dehydrogenase [EC:1.5.5.2] | (RefSeq) proline dehydrogenase 2, mitochondrial-like","[E]","Amino acid transport and metabolism ","Proline dehydrogenase","Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=POX2 PE=2 SV=1","Proline dehydrogenase OS=Coffea canephora OX=49390 GN=GSCOC_T00039748001 PE=3 SV=1","E","Amino acid transport and metabolism","proline dehydrogenase 2, mitochondrial-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Arginine and proline metabolism (ko00330)"]
["c118159.graph_c0",19,1.86,25,2.31,20,2.01,0,0,3,0.34,4,0.4,2.8e-06,-3.044299006,"down","[C]","Energy production and conversion ","Molecular Function: proton transmembrane transporter activity (GO:0015078);; Biological Process: ATP synthesis coupled proton transport (GO:0015986);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263);; ","K02126|6.6e-26|ghi:107944656|K02126 F-type H+-transporting ATPase subunit a | (RefSeq) LOW QUALITY PROTEIN: ATP synthase subunit a","[C]","Energy production and conversion ","--","ATP synthase subunit a OS=Pylaiella littoralis OX=2885 GN=ATP6 PE=3 SV=1","ATP synthase subunit a OS=Anthurium amnicola OX=1678845 GN=ATP6_6 PE=3 SV=1","C","Energy production and conversion","PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit a [Gossypium hirsutum]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","Oxidative phosphorylation (ko00190)"]
["c73755.graph_c0",82,1.5,114,1.45,93,1.28,0,0,0,0,0,0,1.3e-20,-6.872904357,"down","--","--","Biological Process: formation of cytoplasmic translation initiation complex (GO:0001732);; Biological Process: cytoplasmic translation (GO:0002181);; Biological Process: cytoplasmic translational initiation (GO:0002183);; Biological Process: translation reinitiation (GO:0002188);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: mRNA binding (GO:0003729);; Molecular Function: translation initiation factor activity (GO:0003743);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: eukaryotic translation initiation factor 3 complex (GO:0005852);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: translation (GO:0006412);; Biological Process: translational initiation (GO:0006413);; Biological Process: peptide metabolic process (GO:0006518);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Molecular Function: translation factor activity, RNA binding (GO:0008135);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: DNA integration (GO:0015074);; Cellular Component: membrane (GO:0016020);; Biological Process: cellular component organization (GO:0016043);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: ribonucleoprotein complex assembly (GO:0022618);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular protein-containing complex assembly (GO:0034622);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: peptide biosynthetic process (GO:0043043);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: cellular amide metabolic process (GO:0043603);; Biological Process: amide biosynthetic process (GO:0043604);; Cellular Component: multi-eIF complex (GO:0043614);; Biological Process: protein-containing complex subunit organization (GO:0043933);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: protein-containing complex assembly (GO:0065003);; Cellular Component: eukaryotic translation initiation factor 3 complex, eIF3e (GO:0071540);; Cellular Component: eukaryotic translation initiation factor 3 complex, eIF3m (GO:0071541);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: ribonucleoprotein complex subunit organization (GO:0071826);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance biosynthetic process (GO:1901576);; Cellular Component: ribonucleoprotein complex (GO:1990904);; ","K04079|7.5e-29|cann:107855710|K04079 molecular chaperone HtpG | (RefSeq) heat shock cognate protein HSP 90-beta-like","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3278 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane (GO:0016020)","Protein processing in endoplasmic reticulum (ko04141);; Plant-pathogen interaction (ko04626)"]
["c90601.graph_c2",4,0.43,4,0.41,4,0.44,57,6.28,36,4.55,47,5.14,1.14e-08,2.958957166,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: protein folding (GO:0006457);; Biological Process: response to heat (GO:0009408);; Biological Process: response to salt stress (GO:0009651);; Biological Process: response to hydrogen peroxide (GO:0042542);; Molecular Function: protein self-association (GO:0043621);; Molecular Function: unfolded protein binding (GO:0051082);; Biological Process: protein complex oligomerization (GO:0051259);; ","K13993|1.1e-91|oeu:111388045|K13993 HSP20 family protein | (RefSeq) 22.0 kDa class IV heat shock protein-like","[O]","Posttranslational modification, protein turnover, chaperones ","Hsp20/alpha crystallin family;; HSP20-like domain found in ArsA;; CS domain","22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1","HSP20-like chaperones superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_027146 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","22.0 kDa class IV heat shock protein-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; biological process: cellular component organization or biogenesis (GO:0071840)","Protein processing in endoplasmic reticulum (ko04141)"]
["c107396.graph_c1",151,15.83,164,17.38,144,16.8,0,0,1,0.11,1,0.09,7.91e-29,-6.825984425,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103931.graph_c0",103,3,97,2.66,90,2.7,562,16.38,762,25.39,752,21.76,8.2e-58,2.505566871,"up","--","--","Cellular Component: vacuole (GO:0005773);; ","--","--","--","Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A OS=Prunus dulcis OX=3755 PE=1 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a024665mg PE=4 SV=1","S","Function unknown","peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c91722.graph_c0",0,0,0,0,2,0.21,50,5.24,38,4.53,65,6.71,1.3e-11,4.737593932,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c90618.graph_c1",32,3.78,59,6.56,35,4.36,0,0,8,1.11,13,1.56,0.009385761,-2.215020128,"down","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02893|4.5e-15|vra:106756341|K02893 large subunit ribosomal protein L23Ae | (RefSeq) 60S ribosomal protein L23a","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L23, N-terminal domain","60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1","60S ribosomal protein L23a (Fragment) OS=Anthurium amnicola OX=1678845 GN=Rpl23a_2 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","unnamed protein product [Digitaria exilis]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c117702.graph_c1",672,23.12,655,21.17,589,21.16,3866,148.16,3416,151.53,3865,147.01,1.01e-249,2.215186007,"up","[I]","Lipid transport and metabolism ","Biological Process: long-chain fatty acid metabolic process (GO:0001676);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: long-chain fatty acid-CoA ligase activity (GO:0004467);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to fungus (GO:0009620);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: cellular process (GO:0009987);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: wax biosynthetic process (GO:0010025);; Biological Process: post-embryonic root morphogenesis (GO:0010101);; Biological Process: lateral root morphogenesis (GO:0010102);; Biological Process: cutin biosynthetic process (GO:0010143);; Biological Process: lateral root formation (GO:0010311);; Cellular Component: endomembrane system (GO:0012505);; Molecular Function: fatty acid ligase activity (GO:0015645);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: CoA-ligase activity (GO:0016405);; Molecular Function: ligase activity (GO:0016874);; Molecular Function: ligase activity, forming carbon-sulfur bonds (GO:0016877);; Molecular Function: acid-thiol ligase activity (GO:0016878);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: root system development (GO:0022622);; Cellular Component: cell junction (GO:0030054);; Molecular Function: very long-chain fatty acid-CoA ligase activity (GO:0031957);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule metabolic process (GO:0044281);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: root development (GO:0048364);; Biological Process: lateral root development (GO:0048527);; Biological Process: post-embryonic root development (GO:0048528);; Biological Process: anatomical structure formation involved in morphogenesis (GO:0048646);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: defense response to fungus (GO:0050832);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Cellular Component: symplast (GO:0055044);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: post-embryonic plant organ development (GO:0090696);; Biological Process: post-embryonic plant organ morphogenesis (GO:0090697);; Biological Process: post-embryonic plant morphogenesis (GO:0090698);; Biological Process: defense response to other organism (GO:0098542);; Biological Process: plant organ development (GO:0099402);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: plant organ morphogenesis (GO:1905392);; Biological Process: plant organ formation (GO:1905393);; ","K01897|1.4e-165|oeu:111381474|K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] | (RefSeq) long chain acyl-CoA synthetase 2","[I]","Lipid transport and metabolism ","AMP-binding enzyme;; Cold acclimation protein WCOR413;; AMP-binding enzyme","Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana OX=3702 GN=LACS2 PE=2 SV=1","4-coumarate--CoA ligase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002552mg PE=4 SV=1","I","Lipid transport and metabolism","long chain acyl-CoA synthetase 2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; cellular component: symplast (GO:0055044);; biological process: multi-organism process (GO:0051704);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Fatty acid biosynthesis (ko00061);; Fatty acid degradation (ko00071);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)"]
["c111797.graph_c0",49,5.4,73,7.24,82,10.01,21,2.8,27,4.69,39,5.4,4.6e-06,-1.515789679,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","--","--","--","--","--","Integrase catalytic domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001990 PE=4 SV=1","--","--","--","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c102656.graph_c0",832,29.46,863,28.89,777,28.77,3129,115.71,2429,102.63,2878,106.01,2.37e-82,1.444136338,"up","--","--","Molecular Function: ATP transmembrane transporter activity (GO:0005347);; Cellular Component: integral component of membrane (GO:0016021);; ","K14684|7.3e-85|oeu:111397573|K14684 solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 | (RefSeq) adenine nucleotide transporter BT1, chloroplastic/mitochondrial-like","[C]","Energy production and conversion ","Mitochondrial carrier protein","Adenine nucleotide transporter BT1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_14427 PE=3 SV=1","C","Energy production and conversion","adenine nucleotide transporter BT1, chloroplastic/mitochondrial-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c84231.graph_c0",2,0.2,0,0,4,0.4,23,2.31,19,2.19,23,2.17,0.000144895,2.627002716,"up","--","--","Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; ","K00430|2.3e-72|oeu:111397026|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase 51-like","--","--","Peroxidase;; Peroxidase","Peroxidase 51 OS=Arabidopsis thaliana OX=3702 GN=PER51 PE=2 SV=1","Peroxidase OS=Sesamum indicum OX=4182 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","peroxidase 51-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488)","Phenylpropanoid biosynthesis (ko00940)"]
["c115755.graph_c0",29,3.19,41,4.16,34,3.89,5,0.55,9,1.14,6,0.66,1.98e-07,-2.511604112,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c100541.graph_c0",26,1.53,52,2.89,28,1.7,16,0.96,14,0.97,14,0.84,0.00057359,-1.499717656,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c37610.graph_c0",0,0,0,0,0,0,22,1.89,20,1.97,27,2.31,2.13e-07,4.498520299,"up","[V]","Defense mechanisms ","Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: histone-lysine N-methyltransferase activity (GO:0018024);; ","K11420|9.7e-143|sind:105158616|K11420 [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] | (RefSeq) histone-lysine N-methyltransferase family member SUVH9","[BK]","--","SAD/SRA domain;; Pre-SET motif","Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana OX=3702 GN=SUVH9 PE=1 SV=1","Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X66121 PE=4 SV=1","B","Chromatin structure and dynamics","histone-lysine N-methyltransferase family member SUVH9-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","Lysine degradation (ko00310)"]
["c80177.graph_c0",29,1.03,10,0.32,6,0.24,88,3.08,46,1.81,65,2.29,7.72e-05,1.724477743,"up","[C]","Energy production and conversion ","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K17871|5.3e-279|sind:105167379|K17871 NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9] | (RefSeq) external alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial","[C]","Energy production and conversion ","Pyridine nucleotide-disulphide oxidoreductase;; Pyridine nucleotide-disulphide oxidoreductase","External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB4 PE=1 SV=1","NADH:ubiquinone reductase (non-electrogenic) OS=Dorcoceras hygrometricum OX=472368 GN=F511_28654 PE=3 SV=1","C","Energy production and conversion","hypothetical protein F511_28654 [Dorcoceras hygrometricum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c109717.graph_c0",19,1.08,13,0.6,18,0.89,45,1.49,56,2.14,57,1.4,0.000815956,1.284711407,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: recognition of pollen (GO:0048544);; ","K01180|6.1e-49|cmax:111487562|K01180 endo-1,3(4)-beta-glucanase [EC:3.2.1.6] | (RefSeq) uncharacterized protein LOC111487562","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Protein tyrosine and serine/threonine kinase","G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_002885 PE=4 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","--"]
["c104102.graph_c0",1110,35.15,1254,37.59,1048,32.95,447,14.88,372,14.83,473,17.28,5.32e-87,-1.721231077,"down","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Molecular Function: ATPase-coupled monosaccharide transmembrane transporter activity (GO:0015407);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","K21396|9.9e-51|gsl:Gasu_36200|K21396 ATP-binding cassette, subfamily G (WHITE), eye pigment precursor transporter | (RefSeq) ABC transporter, ATP-binding protein","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","ABC-2 type transporter;; ABC transporter;; ABC-2 type transporter","ABC transporter G family member 28 OS=Arabidopsis thaliana OX=3702 GN=ABCG28 PE=3 SV=1","Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09202 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 28 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c83673.graph_c0",41,5.07,41,4.77,40,5.07,104,13.17,119,17.27,121,15.21,5.69e-06,1.155312451,"up","--","--","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[I]","Lipid transport and metabolism ","Acyl CoA binding protein","Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ACBP1 PE=1 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a009364mg PE=3 SV=1","I","Lipid transport and metabolism","acyl-CoA-binding domain-containing protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107152.graph_c0",11,1.01,9,0.49,14,1.72,60,5.64,71,8.74,84,9.39,4e-09,2.238732918,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: carbohydrate binding (GO:0030246);; ","--","--","--","--","G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2","Receptor-like serine/threonine-protein kinase OS=Nicotiana tabacum OX=4097 GN=LOC107785480 PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Nicotiana tabacum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107035.graph_c1",2,0.11,5,0.27,3,0.41,19,1.79,17,1.66,25,1.61,0.001901381,2.004885817,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103102.graph_c0",231,11.11,215,9.53,178,8.88,630,32.8,463,27.53,580,30.53,5.44e-17,1.093069984,"up","[IR]","--","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: lipase activity (GO:0016298);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K00679|3.3e-56|cic:CICLE_v10027727mg|K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] | (RefSeq) hypothetical protein","--","--","GDSL-like Lipase/Acylhydrolase;; GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana OX=3702 GN=EXL3 PE=2 SV=1","Lipase_GDSL domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_031193 PE=3 SV=1","I","Lipid transport and metabolism","GDSL esterase/lipase EXL1-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Glycerolipid metabolism (ko00561)"]
["c106677.graph_c0",9,0.16,5,0.09,4,0.08,53,0.99,69,1.47,75,1.39,4.53e-11,2.950268862,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|9.6e-82|lang:109334483|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor-like protein kinase HSL1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15802 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase HSL2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c88880.graph_c0",3,0.3,3,0.3,1,0.11,28,2.48,35,3.24,37,2.96,4.08e-07,3.104942474,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_021649 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111398521 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c109708.graph_c0",96,2.15,104,2.13,81,2.25,50,1.16,50,1.35,58,1.3,4.02e-06,-1.132914984,"down","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","K22698|4.8e-235|oeu:111370448|K22698 protein SEY1 [EC:3.6.5.-] | (RefSeq) protein ROOT HAIR DEFECTIVE 3 homolog 2-like isoform X1","[R]","General function prediction only ","Root hair defective 3 GTP-binding protein (RHD3);; Root hair defective 3 GTP-binding protein (RHD3);; 50S ribosome-binding GTPase","Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g45160 PE=2 SV=1","Protein ROOT HAIR DEFECTIVE 3 homolog OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04576 PE=3 SV=1","S","Function unknown","protein ROOT HAIR DEFECTIVE 3 homolog 2-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c105769.graph_c0",24,2.05,25,2.8,25,2.92,7,0.97,4,0.77,7,0.54,3.91e-05,-2.180832499,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c104691.graph_c1",81,6.79,109,8.53,107,9.48,52,4.35,42,4.05,51,4.98,1.21e-07,-1.337310381,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c118295.graph_c0",0,0,0,0,0,0,24,4.99,24,5.72,25,5.15,1.06e-07,4.579926162,"up","--","--","--","--","--","--","--","--","--","--","--","DNA-directed RNA polymerase 1B, mitochondrial-like [Olea europaea var. sylvestris]","--","--"]
["c67585.graph_c0",1,0.09,0,0,1,0.09,30,2.83,27,2.92,22,2.06,3.7e-07,3.852962352,"up","--","--","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; ","--","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","--","ABC transporter G family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCG15 PE=2 SV=2","ABC transporter domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_035060 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter G family member 15-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c108769.graph_c0",3455,65.76,3769,68,3358,66.36,147,2.34,164,3.09,154,2.5,0,-4.818227451,"down","[K]","Transcription ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; ","K15362|0.0e+00|oeu:111394487|K15362 fanconi anemia group J protein [EC:3.6.4.12] | (RefSeq) Fanconi anemia group J protein homolog isoform X1","[L]","Replication, recombination and repair ","DEAD_2;; Helicase C-terminal domain","Regulator of telomere elongation helicase 1 homolog OS=Arabidopsis thaliana OX=3702 GN=RTEL1 PE=3 SV=1","Brca1 interacting protein helicase 1 brip1 OS=Striga asiatica OX=4170 GN=STAS_13774 PE=4 SV=1","L","Replication, recombination and repair","Fanconi anemia group J protein homolog isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: metabolic process (GO:0008152)","Homologous recombination (ko03440)"]
["c99567.graph_c0",2,0.16,0,0,1,0.08,30,2.44,16,1.49,19,1.54,1.48e-05,3.265351686,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Cotton fibre expressed protein","--","RACK1C OS=Catalpa bungei OX=265496 PE=2 SV=1","S","Function unknown","uncharacterized protein LOC111397097 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107841.graph_c0",28,1.43,31,1.17,23,2.15,98,8.06,82,6.76,86,6.65,5.23e-06,1.346570039,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: fatty acid metabolic process (GO:0006631);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: biosynthetic process (GO:0009058);; Cellular Component: acetyl-CoA carboxylase complex (GO:0009317);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid envelope (GO:0009526);; Cellular Component: plastid stroma (GO:0009532);; Cellular Component: plastid (GO:0009536);; Cellular Component: chloroplast stroma (GO:0009570);; Cellular Component: chloroplast envelope (GO:0009941);; Biological Process: cellular process (GO:0009987);; Biological Process: organic acid biosynthetic process (GO:0016053);; Molecular Function: CoA carboxylase activity (GO:0016421);; Molecular Function: ligase activity (GO:0016874);; Molecular Function: ligase activity, forming carbon-carbon bonds (GO:0016885);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Cellular Component: organelle envelope (GO:0031967);; Cellular Component: envelope (GO:0031975);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete chloroplast part (GO:0044434);; Cellular Component: obsolete plastid part (GO:0044435);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K02160|6.1e-18|oeu:111375583|K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein | (RefSeq) biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like","--","--","--","--","Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Populus alba OX=43335 GN=D5086_0000022230 PE=4 SV=1","C","Energy production and conversion","biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422)","Fatty acid biosynthesis (ko00061);; Pyruvate metabolism (ko00620);; Propanoate metabolism (ko00640);; Carbon metabolism (ko01200);; Fatty acid metabolism (ko01212)"]
["c100961.graph_c0",704,37.93,785,40.41,706,38.73,420,22.1,381,24.39,445,22.09,4.7e-34,-1.137549774,"down","--","--","--","--","--","--","Protein of unknown function (DUF4050)","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014871mg PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111393925 isoform X4 [Olea europaea var. sylvestris]","--","--"]
["c113824.graph_c2",1630,78.03,1724,79.82,1510,75.09,802,41.67,833,48.97,940,48.73,6.45e-64,-1.237322916,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","K19589|2.0e-09|zma:100283871|K19589 release factor glutamine methyltransferase [EC:2.1.1.297] | (RefSeq) uncharacterized protein LOC100283871","[K]","Transcription ","KNOX2 domain;; KNOX1 domain;; Homeobox KN domain;; ELK domain;; Homeodomain","Homeobox protein knotted-1-like 3 OS=Malus domestica OX=3750 PE=2 SV=1","Putative homeobox protein knotted-1-like 3 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_006522 PE=3 SV=1","K","Transcription","homeobox protein knotted-1-like 3 isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c98621.graph_c0",4,0.19,9,0.43,7,0.38,29,1.25,27,1.51,20,1,0.007827324,1.479229247,"up","[T]","Signal transduction mechanisms ","Molecular Function: non-membrane spanning protein tyrosine kinase activity (GO:0004715);; Molecular Function: ATP binding (GO:0005524);; ","K06632|7.2e-200|sind:105165237|K06632 wee1-like protein kinase [EC:2.7.11.1] | (RefSeq) wee1-like protein kinase","[D]","Cell cycle control, cell division, chromosome partitioning ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Wee1-like protein kinase OS=Arabidopsis thaliana OX=3702 GN=WEE1 PE=1 SV=1","Cyclin-dependent kinase WEE1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22086 PE=4 SV=1","T","Signal transduction mechanisms","wee1-like protein kinase [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c94892.graph_c0",991,58.17,960,53.23,884,53.36,45,2.71,42,2.89,57,3.42,4.03e-211,-4.59478097,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25531 PE=4 SV=1","--","--","uncharacterized protein LOC111367092 [Olea europaea var. sylvestris]","--","--"]
["c109439.graph_c1",4,0.09,20,0.44,10,0.25,74,1.75,92,2.45,76,1.76,1.35e-09,2.413588815,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97638.graph_c0",19,1.5,28,2.16,40,3.88,0,0,0,0,0,0,1.22e-10,-5.302511058,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107064.graph_c0",195,9.64,171,8.15,172,8.32,914,41.48,690,37.17,815,37.31,2.28e-51,1.835434921,"up","[S]","Function unknown ","Molecular Function: cyclopropane-fatty-acyl-phospholipid synthase activity (GO:0008825);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: methylation (GO:0032259);; ","K00574|3.5e-179|oeu:111390533|K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] | (RefSeq) uncharacterized protein LOC111390533 isoform X1","--","--","Mycolic acid cyclopropane synthetase;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase small domain;; Nodulation protein S (NodS);; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);; Ribosomal protein L11 methyltransferase (PrmA)","3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase OS=Catharanthus roseus OX=4058 GN=NMT PE=1 SV=1","Cyclopropane-fatty-acyl-phospholipid synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09419 PE=4 SV=1","M","Cell wall/membrane/envelope biogenesis","uncharacterized protein LOC111390533 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c111486.graph_c1",1,0.06,1,0.04,2,0.11,46,2.75,91,5.44,116,6.22,1.15e-15,4.897321342,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K19476|4.7e-65|cic:CICLE_v10026997mg|K19476 vacuolar protein sorting-associated protein IST1 | (RefSeq) hypothetical protein","[E]","Amino acid transport and metabolism ","Transmembrane amino acid transporter protein","Lysine histidine transporter-like 8 OS=Arabidopsis thaliana OX=3702 GN=AATL1 PE=1 SV=1","Aa_trans domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_009625 PE=4 SV=1","E","Amino acid transport and metabolism","lysine histidine transporter-like 8 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Endocytosis (ko04144)"]
["c100264.graph_c0",88,4.31,130,5.74,124,6.14,7,0.74,9,0.88,14,1.29,8.97e-27,-3.705669842,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c109158.graph_c0",3633,123.4,3874,125.58,3468,124.88,534,20.25,410,16.16,465,15.94,0,-3.279649183,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","K00521|9.1e-41|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like","--","--","No apical meristem (NAM) protein","NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1","NAC domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04665 PE=4 SV=1","K","Transcription","NAC domain-containing protein 72-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","--"]
["c83070.graph_c0",21,2.12,22,2.09,34,3.52,3,0.31,9,1.07,9,0.92,0.000163851,-2.024027316,"down","--","--","--","--","--","--","PAR1 protein","--","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033217 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111365757 [Olea europaea var. sylvestris]","--","--"]
["c61111.graph_c0",5,0.27,4,0.21,2,0.11,44,2.44,86,5.47,71,3.92,2.69e-12,3.575067818,"up","[C]","Energy production and conversion ","Molecular Function: L-lactate dehydrogenase activity (GO:0004459);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: carboxylic acid metabolic process (GO:0019752);; ","K00016|1.9e-171|spen:107027989|K00016 L-lactate dehydrogenase [EC:1.1.1.27] | (RefSeq) L-lactate dehydrogenase B-like","[C]","Energy production and conversion ","lactate/malate dehydrogenase, NAD binding domain;; lactate/malate dehydrogenase, alpha/beta C-terminal domain","L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1","L-lactate dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07064 PE=3 SV=1","C","Energy production and conversion","Lactate dehydrogenase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987)","Glycolysis / Gluconeogenesis (ko00010);; Cysteine and methionine metabolism (ko00270);; Pyruvate metabolism (ko00620);; Propanoate metabolism (ko00640)"]
["c99303.graph_c0",9,0.73,10,0.76,9,0.75,78,6.45,55,5.22,48,3.95,7e-08,2.257808905,"up","--","--","--","--","--","--","Cotton fibre expressed protein","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06770 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111404932 [Olea europaea var. sylvestris]","--","--"]
["c107442.graph_c1",68,3.47,81,4.33,69,3.75,220,9.92,229,11.33,248,10.76,3.73e-13,1.343822959,"up","--","--","Molecular Function: metal ion binding (GO:0046872);; ","K08486|1.8e-07|vra:106767757|K08486 syntaxin 1B/2/3 | (RefSeq) putative syntaxin-131 isoform X1","[IU]","--","DDHD domain","Phospholipase SGR2 OS=Arabidopsis thaliana OX=3702 GN=SGR2 PE=1 SV=1","DDHD domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12716 PE=4 SV=1","--","--","phospholipase SGR2-like isoform X5 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","SNARE interactions in vesicular transport (ko04130)"]
["c113835.graph_c0",20,0.66,11,0.34,16,0.54,140,5.15,104,3.99,162,5.4,2.47e-18,2.70136701,"up","--","--","Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K20889|3.7e-251|oeu:111378168|K20889 probable glucuronoxylan glucuronosyltransferase IRX7 [EC:2.4.1.-] | (RefSeq) probable glucuronoxylan glucuronosyltransferase IRX7","[GMW]","--","Exostosin family","Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana OX=3702 GN=IRX7 PE=2 SV=1","Putative glucuronoxylan glucuronosyltransferase IRX7 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_030992 PE=3 SV=1","--","--","probable glucuronoxylan glucuronosyltransferase IRX7 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c90224.graph_c0",6,0.59,17,0.99,11,0.72,38,3.05,31,2.25,38,2.92,0.007505793,1.256035114,"up","--","--","Biological Process: transcription, DNA-templated (GO:0006351);; Cellular Component: DRM complex (GO:0070176);; ","--","--","--","Retinal tissue protein","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25826 PE=4 SV=1","--","--","uncharacterized protein LOC111388220 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","--"]
["c42591.graph_c0",0,0,0,0,0,0,24,4.77,48,10.94,59,11.62,1.17e-10,5.285856999,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: methylation (GO:0032259);; ","--","--","--","--","--","Methyltransferase OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g2551 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111405476 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c90544.graph_c0",17,0.98,3,0.16,4,0.24,46,2.71,76,5.12,75,4.39,5.3e-08,2.549786127,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_024926 PE=4 SV=1","--","--","uncharacterized protein LOC111374248 [Olea europaea var. sylvestris]","--","--"]
["c108488.graph_c0",148,27.55,112,19.39,141,25.57,16,1.94,31,5.12,36,4.37,4.33e-20,-2.544317044,"down","[M]","Cell wall/membrane/envelope biogenesis ","Biological Process: galactose metabolic process (GO:0006012);; Molecular Function: inositol 3-alpha-galactosyltransferase activity (GO:0047216);; ","K18819|5.1e-191|oeu:111394392|K18819 inositol 3-alpha-galactosyltransferase [EC:2.4.1.123] | (RefSeq) galactinol synthase 2-like","[G]","Carbohydrate transport and metabolism ","Glycosyl transferase family 8","Galactinol synthase 2 OS=Solanum lycopersicum OX=4081 GN=GOLS2 PE=2 SV=1","Hexosyltransferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_22084 PE=3 SV=1","G","Carbohydrate transport and metabolism","galactinol synthase 2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Galactose metabolism (ko00052)"]
["c104179.graph_c0",988,61.71,942,55.22,891,56.89,2936,184.85,2912,210.31,3217,200.58,2.06e-94,1.360285303,"up","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: ribosomal small subunit assembly (GO:0000028);; Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: cytosolic small ribosomal subunit (GO:0022627);; ","K02998|9.3e-166|oeu:111406245|K02998 small subunit ribosomal protein SAe | (RefSeq) 40S ribosomal protein SA-like isoform X1","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein S2","40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1","40S ribosomal protein SA OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01140 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","40S ribosomal protein SA-like isoform X2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c105440.graph_c0",1390,49.07,1534,50.32,1287,46.1,16882,585.07,15990,634.64,18464,636.89,0,3.283493284,"up","[E]","Amino acid transport and metabolism ","Molecular Function: tyrosine decarboxylase activity (GO:0004837);; Biological Process: cellular amino acid metabolic process (GO:0006520);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","K01593|1.8e-263|oeu:111412252|K01593 aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105] | (RefSeq) tyrosine/DOPA decarboxylase 1-like","[E]","Amino acid transport and metabolism ","Pyridoxal-dependent decarboxylase conserved domain;; Aminotransferase class I and II","Tyrosine decarboxylase OS=Papaver somniferum OX=3469 GN=TYDC PE=1 SV=2","Putative tyrosine decarboxylase OS=Olea europaea OX=4146 GN=TDC PE=2 SV=1","E","Amino acid transport and metabolism","putative tyrosine decarboxylase [Olea europaea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Tyrosine metabolism (ko00350);; Phenylalanine metabolism (ko00360);; Tryptophan metabolism (ko00380);; Isoquinoline alkaloid biosynthesis (ko00950);; Betalain biosynthesis (ko00965)"]
["c117449.graph_c0",9,0.42,5,0.22,19,0.9,84,2.47,73,2.39,93,2.7,1.68e-10,2.473557817,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108821.graph_c4",123,21.9,140,23.44,115,20.84,528,96.89,476,100.57,577,105.62,2.3e-39,1.732514909,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07314 PE=4 SV=1","--","--","hypothetical protein CDL12_07314 [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111682.graph_c0",109,7.82,127,8.64,106,7.58,55,3.86,58,4.74,35,2.52,4.51e-09,-1.491465592,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (GO:0000224);; Biological Process: cell redox homeostasis (GO:0045454);; ","K03671|9.3e-12|mtr:MTR_1g023140|K03671 thioredoxin 1 | (RefSeq) thioredoxin H-type 1 protein","[O]","Posttranslational modification, protein turnover, chaperones ","Thioredoxin","Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1","Thioredoxin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10960 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","thioredoxin-like 2, chloroplastic isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c60436.graph_c0",23,3.8,27,4.18,30,5.07,105,17.77,111,21.55,95,15.95,3.25e-08,1.603839624,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: phosphogluconate dehydrogenase (decarboxylating) activity (GO:0004616);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: D-gluconate metabolic process (GO:0019521);; Molecular Function: NADP binding (GO:0050661);; ","K00033|6.2e-92|oeu:111387596|K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] | (RefSeq) 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic-like","[G]","Carbohydrate transport and metabolism ","NAD binding domain of 6-phosphogluconate dehydrogenase","6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGD3 PE=1 SV=1","6-phosphogluconate dehydrogenase, decarboxylating OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22353 PE=3 SV=1","G","Carbohydrate transport and metabolism","6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic-like, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Pentose phosphate pathway (ko00030);; Glutathione metabolism (ko00480);; Carbon metabolism (ko01200)"]
["c114180.graph_c0",1053,23.51,1168,24.13,1016,22.56,637,16.63,556,15.07,576,13.77,9.06e-44,-1.189568321,"down","[E]","Amino acid transport and metabolism ","Molecular Function: aminopeptidase activity (GO:0004177);; Molecular Function: manganese ion binding (GO:0030145);; Molecular Function: proline dipeptidase activity (GO:0102009);; ","K14213|2.8e-137|oeu:111365547|K14213 Xaa-Pro dipeptidase [EC:3.4.13.9] | (RefSeq) xaa-Pro dipeptidase","[R]","General function prediction only ","Metallopeptidase family M24","--","Putative metallopeptidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12865 PE=4 SV=1","E","Amino acid transport and metabolism","xaa-Pro dipeptidase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","--"]
["c109414.graph_c0",23,1.72,25,2.68,18,1.32,62,2.86,70,3.4,81,3.77,5.62e-05,1.330592362,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112644.graph_c0",26,0.59,29,0.61,38,0.79,114,2.89,114,2.77,121,2.5,1.09e-08,1.55112032,"up","--","--","Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: root development (GO:0048364);; Biological Process: shoot system development (GO:0048367);; ","K20291|4.1e-14|pop:7455364|K20291 conserved oligomeric Golgi complex subunit 4 | (RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial","[R]","General function prediction only ","PPR repeat family;; PPR repeat;; PPR repeat;; Pentatricopeptide repeat domain;; Pentacotripeptide-repeat region of PRORP","Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021373001 PE=4 SV=1","S","Function unknown","putative pentatricopeptide repeat-containing protein At1g53330 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699)","--"]
["c104858.graph_c0",2,0.1,3,0.21,4,0.21,33,1.63,34,2.12,41,2.36,3.35e-07,2.930425505,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Biological Process: transcription, DNA-templated (GO:0006351);; Cellular Component: chloroplast (GO:0009507);; ","K03046|1.7e-14|pmum:18668007|K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] | (RefSeq) rpoC2, CP95_p077; RNA polymerase beta' subunit","--","--","--","DNA-directed RNA polymerase subunit beta'' OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rpoC2 PE=3 SV=1","DNA-directed RNA polymerase (Fragment) OS=Lophozonia moorei OX=28946 GN=rpoC2 PE=4 SV=1","K","Transcription","RNA polymerase beta chain, partial [Lophozonia moorei]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","RNA polymerase (ko03020)"]
["c106855.graph_c2",7,1.52,14,0.66,6,0.37,32,1.7,36,2.04,47,2.45,0.000465986,1.663588695,"up","--","--","Biological Process: tRNA modification (GO:0006400);; Biological Process: tRNA-guanine transglycosylation (GO:0101030);; ","--","[H]","Coenzyme transport and metabolism ","Potential Queuosine, Q, salvage protein family","--","Queuosine salvage protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011434mg PE=3 SV=1","H","Coenzyme transport and metabolism","queuosine salvage protein-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c87441.graph_c0",0,0,0,0,0,0,90,12.07,81,12.66,66,8.83,3.66e-15,6.084272468,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; ","--","[O]","Posttranslational modification, protein turnover, chaperones ","Myb-like DNA-binding domain","Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1","Protein RADIALIS-like 6 OS=Capsicum annuum OX=4072 GN=T459_34042 PE=4 SV=1","K","Transcription","protein RADIALIS-like 3 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c102225.graph_c0",171,7.74,197,8.31,165,7.52,61,2.99,61,3.44,74,3.42,3.14e-19,-1.747472777,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13415|3.7e-32|egu:105047726|K13415 protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1] | (RefSeq) systemin receptor SR160-like","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_026691 PE=4 SV=1","T","Signal transduction mechanisms","hypothetical protein F0562_026691 [Nyssa sinensis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Plant hormone signal transduction (ko04075)"]
["c92446.graph_c0",44,5.11,49,5.36,25,2.94,22,2.57,12,1.66,28,3.21,0.003482369,-1.20133157,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102367.graph_c0",80,3.94,70,3.25,60,3.04,377,18.96,414,23.86,458,22.97,3.28e-41,2.234282328,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: calcium transmembrane transporter activity, phosphorylative mechanism (GO:0005388);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: hydrolase activity (GO:0016787);; ","K01537|4.5e-248|oeu:111377979|K01537 P-type Ca2+ transporter type 2C [EC:7.2.2.10] | (RefSeq) LOW QUALITY PROTEIN: calcium-transporting ATPase 4, plasma membrane-type-like","[P]","Inorganic ion transport and metabolism ","E1-E2 ATPase;; Cation transport ATPase (P-type);; haloacid dehalogenase-like hydrolase;; haloacid dehalogenase-like hydrolase","Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana OX=3702 GN=ACA4 PE=1 SV=1","Calcium-transporting ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20920 PE=3 SV=1","P","Inorganic ion transport and metabolism","LOW QUALITY PROTEIN: calcium-transporting ATPase 4, plasma membrane-type-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116249.graph_c1",3775,157.93,4064,163.77,3777,164.91,1189,52.34,1066,53.88,1169,51.3,9.87e-275,-2.082994769,"down","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: SCF ubiquitin ligase complex (GO:0019005);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Cellular Component: protein-containing complex (GO:0032991);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Cellular Component: catalytic complex (GO:1902494);; Cellular Component: transferase complex (GO:1990234);; ","--","[R]","General function prediction only ","F-box domain;; Leucine Rich repeat","F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1","F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09700 PE=4 SV=1","S","Function unknown","F-box protein SKIP1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c114527.graph_c1",11121,334.17,12168,342.81,11259,341.16,5382,190.27,4423,179.39,5213,184.58,6.6e-186,-1.52545066,"down","[I]","Lipid transport and metabolism ","Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Biological Process: fatty acid metabolic process (GO:0006631);; ","K10527|0.0e+00|oeu:111372764|K10527 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211] | (RefSeq) glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like isoform X1","[I]","Lipid transport and metabolism ","3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;; Enoyl-CoA hydratase/isomerase;; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain;; Enoyl-CoA hydratase/isomerase","Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a OS=Cucumis sativus OX=3659 PE=1 SV=1","3-hydroxyacyl-CoA dehydrogenase OS=Carpinus fangiana OX=176857 GN=FH972_003237 PE=3 SV=1","I","Lipid transport and metabolism","glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Fatty acid degradation (ko00071);; alpha-Linolenic acid metabolism (ko00592);; Fatty acid metabolism (ko01212)"]
["c85316.graph_c1",15,2.76,10,2,8,1.58,53,5.72,38,5.1,54,6.3,5.09e-05,1.719169708,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: potassium ion transmembrane transporter activity (GO:0015079);; Cellular Component: integral component of membrane (GO:0016021);; ","K03549|4.8e-66|oeu:111397731|K03549 KUP system potassium uptake protein | (RefSeq) potassium transporter 2-like","--","--","K+ potassium transporter","Potassium transporter 24 OS=Oryza sativa subsp. japonica OX=39947 GN=HAK24 PE=3 SV=1","Potassium transporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06835 PE=3 SV=1","P","Inorganic ion transport and metabolism","potassium transporter 2-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c43678.graph_c0",69,5.52,92,6.85,65,5.27,2,0.16,1,0.09,0,0,7.53e-20,-5.599989125,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114963.graph_c0",34,0.95,51,1.15,32,1.04,101,3.5,137,4.75,166,4.8,9.02e-08,1.440631536,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: recognition of pollen (GO:0048544);; ","K24104|2.0e-69|thj:104799061|K24104 GPN-loop GTPase | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104799061","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; D-mannose binding lectin;; S-locus glycoprotein domain;; PAN-like domain;; Domain of unknown function (DUF3403)","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_12782 PE=4 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","--"]
["c88521.graph_c1",32,1.11,47,1.52,37,1.31,3,0.11,1,0.04,0,0,3.02e-12,-4.435868225,"down","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: signaling (GO:0023052);; Molecular Function: ADP binding (GO:0043531);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Cellular Component: cell periphery (GO:0071944);; ","K13459|2.6e-151|oeu:111403951|K13459 disease resistance protein RPS2 | (RefSeq) probable disease resistance protein At4g27220","[T]","Signal transduction mechanisms ","Leucine rich repeat;; Leucine Rich repeats (2 copies)","Disease resistance protein SUMM2 OS=Arabidopsis thaliana OX=3702 GN=SUMM2 PE=1 SV=1","Putative Disease resistance protein OS=Davidia involucrata OX=16924 GN=Din_035430 PE=4 SV=1","T","Signal transduction mechanisms","probable disease resistance protein At4g27220 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","Plant-pathogen interaction (ko04626)"]
["c89908.graph_c0",46,5.73,58,7.25,47,6.71,0,0,0,0,3,0.31,3.7e-15,-5.049976254,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105314.graph_c0",11,0.56,6,0.19,9,0.94,224,15.67,197,19.48,250,17.64,1.58e-39,4.230354498,"up","[TK]","--","Biological Process: phosphorelay signal transduction system (GO:0000160);; ","K14492|4.3e-50|oeu:111370563|K14492 two-component response regulator ARR-A family | (RefSeq) two-component response regulator ARR8-like isoform X1","[K]","Transcription ","Response regulator receiver domain","Two-component response regulator ARR9 OS=Arabidopsis thaliana OX=3702 GN=ARR9 PE=1 SV=1","SRR198 OS=Striga asiatica OX=4170 PE=2 SV=1","K","Transcription","two-component response regulator ARR8-like isoform X2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","Plant hormone signal transduction (ko04075)"]
["c88088.graph_c0",27,2.01,20,1.39,20,1.49,9,0.67,5,0.43,1,0.07,0.000168826,-2.22147148,"down","--","--","--","--","--","--","Protein of unknown function (DUF1442)","--","Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102580155 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111368782 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c112094.graph_c0",75,2.32,93,1.99,69,1.78,11,1.34,5,0.83,10,1.55,3.82e-19,-3.369171378,"down","--","--","--","--","--","--","--","--","DUF1985 domain-containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_320770 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111406547 [Olea europaea var. sylvestris]","--","--"]
["c118058.graph_c0",1,0.25,0,0,0,0,68,17.48,49,14.46,61,15.52,4.81e-13,5.298427143,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22807 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_22807 [Handroanthus impetiginosus]","molecular function: binding (GO:0005488)","--"]
["c92958.graph_c2",12,4.26,21,6.79,16,5.39,61,22.03,52,21.35,60,21.05,0.000104075,1.443006836,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010911mg PE=4 SV=1","S","Function unknown","peroxisomal and mitochondrial division factor 2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106562.graph_c2",163,3.81,220,4.28,155,3.62,536,12.86,607,14.75,707,15.71,4.32e-26,1.455161423,"up","[ET]","--","Molecular Function: ligand-gated ion channel activity (GO:0015276);; Cellular Component: integral component of membrane (GO:0016021);; ","K05387|8.1e-304|oeu:111368507|K05387 glutamate receptor, ionotropic, plant | (RefSeq) glutamate receptor 3.4-like","[PET]","--","Receptor family ligand binding region;; Periplasmic binding protein;; Ligated ion channel L-glutamate- and glycine-binding site;; Bacterial extracellular solute-binding proteins, family 3;; Ligand-gated ion channel;; Bacterial extracellular solute-binding proteins, family 3;; Receptor family ligand binding region","Glutamate receptor 3.5 OS=Arabidopsis thaliana OX=3702 GN=GLR3.5 PE=2 SV=2","Glutamate receptor OS=Coffea canephora OX=49390 GN=GSCOC_T00035019001 PE=3 SV=1","P","Inorganic ion transport and metabolism","glutamate receptor 3.4-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; molecular function: molecular transducer activity (GO:0060089);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102924.graph_c0",24,1.36,6,0.32,4,0.18,39,2.03,59,3.33,80,3.89,5.59e-05,1.933007145,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: mRNA binding (GO:0003729);; ","K12741|2.7e-20|smo:SELMODRAFT_169811|K12741 heterogeneous nuclear ribonucleoprotein A1/A3 | (RefSeq) hypothetical protein","[R]","General function prediction only ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1","RRM domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G105101 PE=4 SV=1","A","RNA processing and modification","RNA-binding protein 24-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","Spliceosome (ko03040)"]
["c115697.graph_c0",77,9.12,86,10,73,8.64,313,37.35,306,41.07,347,41.37,7.11e-25,1.69858229,"up","--","--","--","K23288|4.8e-18|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","--","--","Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1595 PE=4 SV=1","--","--","Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]","--","--"]
["c110316.graph_c0",32,0.44,33,0.43,28,0.4,4,0.31,1,0.02,5,0.12,1.05e-08,-3.209714395,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K03006|1.5e-79|adu:107466525|K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; Integrase core domain;; Reverse transcriptase (RNA-dependent DNA polymerase);; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_005862 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein Prudu_005862 [Prunus dulcis]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","RNA polymerase (ko03020)"]
["c94894.graph_c0",27,3.35,33,3.93,28,3.58,91,12.7,68,10.35,98,11.98,5.99e-05,1.189613637,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: cell morphogenesis (GO:0000902);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: cell population proliferation (GO:0008283);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to red or far red light (GO:0009639);; Biological Process: shade avoidance (GO:0009641);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: response to cytokinin (GO:0009735);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: negative regulation of biosynthetic process (GO:0009890);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: flower development (GO:0009908);; Biological Process: cellular process (GO:0009987);; Biological Process: shoot system morphogenesis (GO:0010016);; Biological Process: red or far-red light signaling pathway (GO:0010017);; Biological Process: meristem determinacy (GO:0010022);; Biological Process: response to organic substance (GO:0010033);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: fruit development (GO:0010154);; Biological Process: response to far red light (GO:0010218);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: negative regulation of macromolecule biosynthetic process (GO:0010558);; Biological Process: floral meristem determinacy (GO:0010582);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: reproductive process (GO:0022414);; Biological Process: root system development (GO:0022622);; Biological Process: signaling (GO:0023052);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: negative regulation of cellular metabolic process (GO:0031324);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: negative regulation of cellular biosynthetic process (GO:0031327);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: growth (GO:0040007);; Biological Process: response to chemical (GO:0042221);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Molecular Function: protein self-association (GO:0043621);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: negative regulation of nucleobase-containing compound metabolic process (GO:0045934);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: root development (GO:0048364);; Biological Process: shoot system development (GO:0048367);; Biological Process: floral whorl development (GO:0048438);; Biological Process: gynoecium development (GO:0048467);; Biological Process: meristem development (GO:0048507);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: developmental growth (GO:0048589);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: negative regulation of nitrogen compound metabolic process (GO:0051172);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: negative regulation of RNA metabolic process (GO:0051253);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: reproductive system development (GO:0061458);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to abiotic stimulus (GO:0071214);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to radiation (GO:0071478);; Biological Process: cellular response to light stimulus (GO:0071482);; Biological Process: cellular response to red or far red light (GO:0071489);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: fruit septum development (GO:0080127);; Biological Process: reproductive shoot system development (GO:0090567);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: plant organ development (GO:0099402);; Biological Process: cellular response to environmental stimulus (GO:0104004);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: negative regulation of RNA biosynthetic process (GO:1902679);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: negative regulation of nucleic acid-templated transcription (GO:1903507);; Biological Process: plant septum development (GO:1905328);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: negative regulation of cellular macromolecule biosynthetic process (GO:2000113);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K09338|8.5e-73|oeu:111381732|K09338 homeobox-leucine zipper protein | (RefSeq) homeobox-leucine zipper protein HAT4-like","[K]","Transcription ","HD-ZIP protein N terminus","Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=1 SV=1","Homeobox domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_038075 PE=3 SV=1","K","Transcription","homeobox-leucine zipper protein HAT4-like [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: reproductive process (GO:0022414);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: multicellular organismal process (GO:0032501);; biological process: growth (GO:0040007)","--"]
["c75390.graph_c0",0,0,0,0,0,0,18,2.76,18,3.16,25,3.8,8.06e-07,4.334441237,"up","--","--","Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","Non-specific lipid-transfer protein A OS=Ricinus communis OX=3988 PE=1 SV=1","Non-specific lipid-transfer protein OS=Capsicum annuum OX=4072 GN=LOC107879760 PE=3 SV=1","M","Cell wall/membrane/envelope biogenesis","non-specific lipid-transfer protein A-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c90724.graph_c1",102,14.71,93,12.6,71,10.48,362,53.48,295,50,346,50.74,2.03e-21,1.580725761,"up","[I]","Lipid transport and metabolism ","Cellular Component: chloroplast (GO:0009507);; ","K01597|3.6e-85|oeu:111405372|K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] | (RefSeq) diphosphomevalonate decarboxylase MVD2, peroxisomal-like isoform X1","[I]","Lipid transport and metabolism ","GHMP kinases N terminal domain","Diphosphomevalonate decarboxylase MVD1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=MVD1 PE=1 SV=1","Diphosphomevalonate decarboxylase OS=Osmanthus fragrans OX=93977 PE=2 SV=1","I","Lipid transport and metabolism","diphosphomevalonate decarboxylase MVD2, peroxisomal-like isoform X3 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Terpenoid backbone biosynthesis (ko00900)"]
["c68494.graph_c0",47,42.19,70,56.83,63,55.21,23,20.99,18,20.04,7,6.32,3.84e-08,-2.12513437,"down","--","--","--","K13448|3.7e-12|oeu:111399652|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML49","--","--","--","--","--","--","--","probable calcium-binding protein CML49 [Olea europaea var. sylvestris]","--","Plant-pathogen interaction (ko04626)"]
["c70854.graph_c0",262,52.59,282,52.97,293,60,79,16.26,64,15.11,55,11.22,6.53e-39,-2.37932121,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117744.graph_c1",19,1.29,23,1.32,11,0.72,155,10.22,123,8.99,198,12.49,3.6e-21,2.770500152,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106560.graph_c0",39,4.97,77,9.21,35,4.59,18,1.7,18,2.38,15,1.56,6.59e-06,-1.79017319,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115432.graph_c0",72,5.42,94,5.93,110,7.7,12,0.43,9,0.35,16,0.56,1.53e-19,-3.123195062,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111412421 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c105886.graph_c0",82,4.32,125,5.85,125,6.47,433,22.3,418,25.84,506,25.41,8.32e-27,1.693398376,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K20893|2.3e-198|oeu:111408837|K20893 probable galacturonosyltransferase-like 1 [EC:2.4.1.-] | (RefSeq) probable galacturonosyltransferase-like 1","--","--","Glycosyl transferase family 8","Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana OX=3702 GN=GATL1 PE=2 SV=1","Hexosyltransferase (Fragment) OS=Fraxinus mandshurica OX=56029 GN=GT8 PE=2 SV=1","G","Carbohydrate transport and metabolism","probable galacturonosyltransferase-like 1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","--"]
["c77773.graph_c0",37,8.44,64,13.65,44,10.23,108,25.28,174,46.76,170,39.65,9.76e-07,1.303238446,"up","--","--","--","--","--","--","Gibberellin regulated protein","Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1","Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X23380 PE=3 SV=1","S","Function unknown","peamaclein-like [Olea europaea var. sylvestris]","--","--"]
["c113658.graph_c1",66,3.25,39,2,31,2.36,194,10.55,146,10.02,160,8.01,1.92e-09,1.5302104,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[O]","Posttranslational modification, protein turnover, chaperones ","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07664 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","uncharacterized protein LOC111399918 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104019.graph_c4",32,4.54,18,2.34,35,5.07,8,0.91,13,1.38,19,1.75,0.005823645,-1.337784304,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c115254.graph_c0",81,4.96,58,3.76,61,3.95,253,12.74,197,10.21,230,11.4,7.81e-13,1.424654405,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; ","K11294|1.8e-31|sind:105161381|K11294 nucleolin | (RefSeq) 29 kDa ribonucleoprotein A, chloroplastic-like","[R]","General function prediction only ","RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_012640 PE=4 SV=1","A","RNA processing and modification","29 kDa ribonucleoprotein A, chloroplastic-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c104659.graph_c2",75,10.49,85,11.02,57,8.12,18,2.55,7,1.11,13,1.9,4.51e-14,-2.732693949,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97228.graph_c0",80,10.56,80,9.91,66,8.91,26,3.51,21,3.25,32,4.29,1.77e-09,-1.797900859,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117866.graph_c1",14,0.42,11,0.28,10,0.19,77,1.8,98,2.7,109,2.5,2.07e-13,2.604064348,"up","[I]","Lipid transport and metabolism ","Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: peroxisome (GO:0005777);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: auxin metabolic process (GO:0009850);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of hormone levels (GO:0010817);; Biological Process: hormone metabolic process (GO:0042445);; Cellular Component: microbody (GO:0042579);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; ","--","[I]","Lipid transport and metabolism ","--","Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE18 PE=2 SV=1","4-coumarate--CoA ligase (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_05765 PE=4 SV=1","I","Lipid transport and metabolism","probable acyl-activating enzyme 18, peroxisomal isoform X3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c110393.graph_c0",35,1.03,42,1.4,35,0.96,109,3.4,99,3.57,85,2.79,0.000151817,1.050557937,"up","--","--","Cellular Component: anaphase-promoting complex (GO:0005680);; Biological Process: regulation of mitotic metaphase/anaphase transition (GO:0030071);; Biological Process: anaphase-promoting complex-dependent catabolic process (GO:0031145);; ","K03351|0.0e+00|oeu:111370088|K03351 anaphase-promoting complex subunit 4 | (RefSeq) anaphase-promoting complex subunit 4","[DO]","--","Anaphase-promoting complex, cyclosome, subunit 4;; Anaphase-promoting complex subunit 4 WD40 domain","Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=2 SV=2","Anaphase-promoting complex subunit 4 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20318 PE=4 SV=1","--","--","anaphase-promoting complex subunit 4 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ubiquitin mediated proteolysis (ko04120)"]
["c103259.graph_c0",2,0.28,1,0.05,1,0.05,29,1.17,50,2,43,1.68,2.33e-09,3.924084498,"up","--","--","--","--","--","--","Remorin, C-terminal region","--","Remorin_C domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20730 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111367662 [Olea europaea var. sylvestris]","--","--"]
["c110884.graph_c0",373,17.17,388,17,364,17.42,147,6.93,155,8.5,187,8.81,1.25e-29,-1.51875579,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06274 PE=4 SV=1","--","--","uncharacterized protein LOC111370333 [Olea europaea var. sylvestris]","--","--"]
["c56822.graph_c0",4,0.78,10,1.82,5,0.99,208,41.45,207,47.33,245,48.4,1.92e-38,4.615239503,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09872|2.5e-92|oeu:111392014|K09872 aquaporin PIP | (RefSeq) probable aquaporin PIP-type pTOM75","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum OX=4081 PE=2 SV=1","Aquaporin (Major intrinsic protein family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_30216 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable aquaporin PIP-type pTOM75 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100489.graph_c0",33,3.06,27,2.3,27,2.5,12,1.2,18,1.91,13,1.28,0.004990382,-1.260235466,"down","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: flower development (GO:0009908);; Biological Process: vegetative to reproductive phase transition of meristem (GO:0010228);; Biological Process: reproductive process (GO:0022414);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: shoot system development (GO:0048367);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: reproductive system development (GO:0061458);; Biological Process: reproductive shoot system development (GO:0090567);; ","K06910|3.8e-88|oeu:111390781|K06910 phosphatidylethanolamine-binding protein | (RefSeq) CEN-like protein 1","[R]","General function prediction only ","Phosphatidylethanolamine-binding protein","CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1","Phosphatidylethanolamine binding protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28787 PE=3 SV=1","S","Function unknown","CEN-like protein 1 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699)","--"]
["c88343.graph_c0",544,37.17,438,28.14,445,31.21,327,27.24,234,23.2,297,25.44,8.61e-16,-1.056649349,"down","--","--","Cellular Component: extracellular region (GO:0005576);; Molecular Function: growth factor activity (GO:0008083);; Biological Process: cell population proliferation (GO:0008283);; ","--","--","--","Phytosulfokine precursor protein (PSK)","Phytosulfokines 5 OS=Arabidopsis thaliana OX=3702 GN=PSK5 PE=2 SV=1","Phytosulfokine-beta OS=Coffea canephora OX=49390 GN=GSCOC_T00014604001 PE=3 SV=1","S","Function unknown","phytosulfokines-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)","--"]
["c113460.graph_c1",237,35.11,289,35.53,238,29.53,50,3.64,49,4.75,49,4.14,1.08e-44,-2.660495625,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103715.graph_c0",14,0.38,18,0.48,14,0.4,24,0.71,58,2,65,1.92,0.003453173,1.289301683,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Protein SINE1 OS=Arabidopsis thaliana OX=3702 GN=SINE1 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06880 PE=4 SV=1","--","--","protein SINE1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c100205.graph_c0",7,1.35,7,0.83,7,0.9,103,12.93,121,17.34,100,11.03,3.89e-19,3.473865361,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Plant protein of unknown function;; Plant protein of unknown function","UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1","Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv11b017063mg PE=4 SV=1","S","Function unknown","UPF0481 protein At3g47200-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94843.graph_c0",69,4.1,44,2.76,40,2.08,191,10.31,214,13.96,226,11.36,1.9e-14,1.701266707,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K02906|5.1e-109|sind:105178835|K02906 large subunit ribosomal protein L3 | (RefSeq) 50S ribosomal protein L3-2, chloroplastic isoform X1","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L3","50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1","Large subunit ribosomal protein L3 OS=Salvia splendens OX=180675 GN=RP-L3 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","50S ribosomal protein L3-2, chloroplastic isoform X1 [Sesamum indicum]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Ribosome (ko03010)"]
["c87936.graph_c0",15,2.22,13,1.8,6,0.91,40,6.05,32,5.55,32,4.8,0.009439547,1.223762336,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108359.graph_c0",3761,91.54,3765,91.16,3507,93.49,1741,42.34,1411,38.63,1587,38.67,6.09e-130,-1.540893795,"down","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|7.0e-240|sot:102598131|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 4.6-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana OX=3702 GN=NPF4.6 PE=1 SV=1","Putative Nitrate transporter 1:2 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_047097 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 4.6-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c107375.graph_c0",21114,730.65,22973,752.54,21605,765.75,878,41.78,662,37.63,820,39.11,0,-5.119309058,"down","[C]","Energy production and conversion ","Molecular Function: D-arabinono-1,4-lactone oxidase activity (GO:0003885);; Cellular Component: membrane (GO:0016020);; Molecular Function: L-gulonolactone oxidase activity (GO:0050105);; Molecular Function: FAD binding (GO:0071949);; ","K00103|8.7e-140|oeu:111379529|K00103 L-gulonolactone oxidase [EC:1.1.3.8] | (RefSeq) probable L-gulonolactone oxidase 6","[V]","Defense mechanisms ","FAD binding domain;; D-arabinono-1,4-lactone oxidase","Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana OX=3702 GN=GULLO6 PE=3 SV=1","L-gulonolactone oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04754 PE=3 SV=1","V","Defense mechanisms","probable L-gulonolactone oxidase 6 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; molecular function: binding (GO:0005488)","Ascorbate and aldarate metabolism (ko00053)"]
["c107588.graph_c0",48,3.98,64,4.52,62,5.15,4,0.31,4,0.35,3,0.23,2.34e-16,-3.992042694,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c83673.graph_c1",45,2.01,50,2.11,49,2.25,141,6.48,138,7.21,149,6.76,6.9e-08,1.231812801,"up","--","--","Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[I]","Lipid transport and metabolism ","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeat","Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=ACBP1 PE=1 SV=2","Acyl-CoA-binding protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05890 PE=3 SV=1","I","Lipid transport and metabolism","Acyl-CoA-binding protein [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102981.graph_c0",0,0,0,0,0,0,19,1.05,16,1.01,25,1.37,9.9e-07,4.308468234,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022734 PE=4 SV=1","--","--","hypothetical protein L484_022734 [Morus notabilis]","--","--"]
["c91966.graph_c0",171,9.86,170,9.86,162,10.24,817,48.95,663,45.55,882,54.17,2.89e-59,1.896259846,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: phosphogluconate dehydrogenase (decarboxylating) activity (GO:0004616);; Biological Process: pentose-phosphate shunt (GO:0006098);; Biological Process: D-gluconate metabolic process (GO:0019521);; Molecular Function: NADP binding (GO:0050661);; ","K00033|8.5e-157|zju:107429152|K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] | (RefSeq) 6-phosphogluconate dehydrogenase, decarboxylating 3","[G]","Carbohydrate transport and metabolism ","6-phosphogluconate dehydrogenase, C-terminal domain;; NAD binding domain of 6-phosphogluconate dehydrogenase","6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Spinacia oleracea OX=3562 GN=pgdC PE=1 SV=1","6-phosphogluconate dehydrogenase, decarboxylating OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14637 PE=3 SV=1","G","Carbohydrate transport and metabolism","6-phosphogluconate dehydrogenase [Handroanthus impetiginosus]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Pentose phosphate pathway (ko00030);; Glutathione metabolism (ko00480);; Carbon metabolism (ko01200)"]
["c76339.graph_c0",7,1.72,2,0.67,12,3,70,17.72,49,14.45,54,13.48,4.07e-08,2.53978453,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99106.graph_c0",70,5.6,74,5.76,62,5.11,223,18.25,202,18.64,241,19.42,3.89e-13,1.356764916,"up","[NW]","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: metal ion binding (GO:0046872);; ","K00924|1.1e-123|oeu:111405712|K00924 kinase [EC:2.7.1.-] | (RefSeq) shaggy-related protein kinase alpha-like","[G]","Carbohydrate transport and metabolism ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Shaggy-related protein kinase gamma OS=Arabidopsis thaliana OX=3702 GN=ASK3 PE=1 SV=1","Non-specific serine/threonine protein kinase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09720 PE=3 SV=1","T","Signal transduction mechanisms","shaggy-related protein kinase alpha-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c108594.graph_c1",300,11.81,248,9.22,217,8.83,674,27.54,748,35.58,834,33.92,1.51e-23,1.234372901,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; ","K09060|4.3e-194|oeu:111409956|K09060 plant G-box-binding factor | (RefSeq) common plant regulatory factor 1-like isoform X1","--","--","G-box binding protein MFMR;; bZIP transcription factor;; Disordered region downstream of MFMR;; Basic region leucine zipper","Common plant regulatory factor 1 OS=Petroselinum crispum OX=4043 GN=CPRF1 PE=2 SV=1","BZIP domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00694 PE=3 SV=1","K","Transcription","common plant regulatory factor 1-like isoform X1 [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","--"]
["c107411.graph_c0",2364,76.22,2445,74.99,2352,77.54,1529,53.19,1224,55.81,1426,53.82,4.42e-59,-1.100643604,"down","--","--","Biological Process: lipid metabolic process (GO:0006629);; ","K18875|2.4e-37|egu:105060252|K18875 enhanced disease susceptibility 1 protein | (RefSeq) protein EDS1B-like","--","--","Lipase (class 3);; Enhanced disease susceptibility 1 protein EP domain","Lipase-like PAD4 OS=Arabidopsis thaliana OX=3702 GN=PAD4 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004394mg PE=4 SV=1","G","Carbohydrate transport and metabolism","lipase-like PAD4 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","Plant-pathogen interaction (ko04626)"]
["c104876.graph_c0",57,2.43,62,2.46,42,1.81,20,0.86,23,1.13,18,0.77,2.54e-06,-1.65414928,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107376.graph_c0",122,5.13,60,2.45,71,3.25,25,1.1,24,1.3,20,0.96,2.33e-10,-2.126725224,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K23877|7.3e-97|mdm:103404584|K23877 xyloglucan O-acetyltransferase | (RefSeq) protein ALTERED XYLOGLUCAN 4-like","--","--","GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p;; PMR5 N terminal Domain","Protein trichome birefringence-like 19 OS=Arabidopsis thaliana OX=3702 GN=TBL19 PE=3 SV=1","Protein trichome birefringence-like 19 OS=Nicotiana attenuata OX=49451 GN=TBL19_4 PE=3 SV=1","S","Function unknown","protein trichome birefringence-like 19 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c104438.graph_c1",18,1.25,26,1.82,29,5.28,126,7.86,127,8.49,135,8.18,1.64e-13,2.042839217,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[S]","Function unknown ","PAP2 superfamily C-terminal","--","PAP2_C domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04126 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111372224 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c103428.graph_c0",85,7.5,105,9.21,115,11.74,61,4.57,21,1.9,37,2.77,4.21e-08,-1.652437129,"down","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: electron transfer activity (GO:0009055);; Cellular Component: photosystem I (GO:0009522);; Cellular Component: chloroplast thylakoid membrane (GO:0009535);; Biological Process: photosynthesis (GO:0015979);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: chlorophyll binding (GO:0016168);; Biological Process: protein-chromophore linkage (GO:0018298);; Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539);; ","K02689|5.1e-13|ccaj:29293573|K02689 photosystem I P700 chlorophyll a apoprotein A1 | (RefSeq) psaA, BKH98_gp070; photosystem I P700 apoprotein A1","--","--","--","Photosystem I P700 chlorophyll a apoprotein A1 OS=Angiopteris evecta OX=13825 GN=psaA PE=3 SV=2","Photosystem I P700 chlorophyll a apoprotein A1 OS=Ophioglossum californicum OX=1267209 GN=psaA PE=3 SV=1","C","Energy production and conversion","photosystem1 subunit A, partial [Ophioglossum petiolatum]","molecular function: binding (GO:0005488);; molecular function: electron carrier activity (GO:0009055);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Photosynthesis (ko00195)"]
["c104224.graph_c0",14,0.65,3,0.28,12,0.9,97,3.22,157,6.29,156,5.23,1.32e-19,3.359236762,"up","[IR]","--","Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; ","K00108|1.2e-252|pvu:PHAVU_003G213000g|K00108 choline dehydrogenase [EC:1.1.99.1] | (RefSeq) hypothetical protein","[R]","General function prediction only ","GMC oxidoreductase;; GMC oxidoreductase","Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1","GMC_OxRdtase_N domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_000071 PE=3 SV=1","E","Amino acid transport and metabolism","protein HOTHEAD-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Glycine, serine and threonine metabolism (ko00260)"]
["c91588.graph_c0",13,0.43,8,0.25,10,0.34,809,27.92,831,33.46,889,30.96,4.78e-109,5.902907413,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09866|4.8e-126|nsy:104240867|K09866 aquaporin-4 | (RefSeq) probable aquaporin TIP3-1","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP1-2 PE=2 SV=3","Aquaporin (Major intrinsic protein family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13087 PE=3 SV=1","P","Inorganic ion transport and metabolism","aquaporin AQPAn.G-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c88997.graph_c0",26,6.78,38,9.2,23,6.1,12,3.32,9,2.86,17,4.63,0.001915448,-1.434097034,"down","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22845|5.3e-19|oeu:111405622|K22845 phlorizin synthase [EC:2.4.1.357] | (RefSeq) UDP-glycosyltransferase 88B1-like","--","--","--","--","Glycosyltransferase OS=Forsythia intermedia OX=55183 GN=FkUGT11 PE=2 SV=1","--","--","UDP-glycosyltransferase 88B1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Flavonoid biosynthesis (ko00941)"]
["c99764.graph_c0",25,1.23,19,0.9,16,0.81,192,9.79,177,10.89,210,11.33,1.15e-28,2.891012306,"up","--","--","Molecular Function: carboxypeptidase activity (GO:0004180);; Molecular Function: serine-type peptidase activity (GO:0008236);; ","K01285|7.6e-179|oeu:111367274|K01285 lysosomal Pro-X carboxypeptidase [EC:3.4.16.2] | (RefSeq) lysosomal Pro-X carboxypeptidase","[OR]","--","Serine carboxypeptidase S28","--","Prolylcarboxypeptidase (Angiotensinase C) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16063 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","lysosomal Pro-X carboxypeptidase [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c41819.graph_c0",137,7.4,156,7.97,125,6.99,5315,293.76,4468,282.9,5337,293.44,0,4.841482937,"up","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: metal ion binding (GO:0046872);; ","K05282|5.2e-206|oeu:111391574|K05282 gibberellin-44 dioxygenase [EC:1.14.11.12] | (RefSeq) gibberellin 20 oxidase 1-D-like","[QR]","--","2OG-Fe(II) oxygenase superfamily;; non-haem dioxygenase in morphine synthesis N-terminal","Gibberellin 20 oxidase 1-A OS=Triticum aestivum OX=4565 GN=GA20ox1A PE=2 SV=1","Gibberellin 20-oxidase OS=Torenia fournieri OX=68875 GN=TfGA20ox2 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","gibberellin 20 oxidase 1-D-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Diterpenoid biosynthesis (ko00904)"]
["c112798.graph_c0",17,0.51,13,0.39,29,0.95,126,3.9,142,5.15,168,5.21,5.53e-17,2.490600581,"up","--","--","--","--","--","--","--","--","Cingulin-like protein 1 OS=Dorcoceras hygrometricum OX=472368 GN=F511_10654 PE=4 SV=1","--","--","golgin subfamily A member 6-like protein 22 [Olea europaea var. sylvestris]","--","--"]
["c100348.graph_c0",72,6.04,89,6.94,84,7.07,14,0.7,24,2.55,25,1.59,1.6e-12,-2.218425156,"down","--","--","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: lipase activity (GO:0016298);; ","K00679|1.3e-45|cic:CICLE_v10027727mg|K00679 phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158] | (RefSeq) hypothetical protein","--","--","GDSL-like Lipase/Acylhydrolase","GDSL esterase/lipase 6 OS=Arabidopsis thaliana OX=3702 GN=GLIP6 PE=2 SV=1","GDSL esterase/lipase 6-like OS=Nicotiana tabacum OX=4097 GN=LOC107826741 PE=3 SV=1","I","Lipid transport and metabolism","GDSL esterase/lipase 6 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Glycerolipid metabolism (ko00561)"]
["c114300.graph_c0",685,20.34,752,22,698,21.96,431,13.41,384,14.5,431,13.9,4.68e-31,-1.097376089,"down","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K03294|5.0e-200|sind:105173279|K03294 basic amino acid/polyamine antiporter, APA family | (RefSeq) cationic amino acid transporter 9, chloroplastic","[E]","Amino acid transport and metabolism ","Amino acid permease;; Amino acid permease;; Amino acid permease;; Amino acid permease","Cationic amino acid transporter 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAT9 PE=2 SV=1","Basic amino acid/polyamine antiporter, APA family OS=Salvia splendens OX=180675 GN=TC.APA PE=4 SV=1","E","Amino acid transport and metabolism","cationic amino acid transporter 9, chloroplastic [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c116987.graph_c0",11,0.17,13,0.19,6,0.1,42,0.65,35,0.62,41,0.63,0.0005661,1.565917986,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K17545|6.3e-189|zma:103634684|K17545 serine/threonine-protein kinase ULK4 [EC:2.7.11.1] | (RefSeq) uncharacterized protein LOC103634684","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase);; gag-polypeptide of LTR copia-type;; GAG-pre-integrase domain;; Retrotransposon gag protein","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_021909 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein VITISV_021909 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c108180.graph_c0",1864,284.36,2046,292.05,1928,295.74,1065,188.67,937,188.81,972,169.98,1.91e-69,-1.292769495,"down","--","--","Cellular Component: mitochondrial respirasome (GO:0005746);; ","--","--","--","--","Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana OX=3702 GN=At2g47380 PE=1 SV=1","Cytochrome c oxidase subunit 5C OS=Gossypium australe OX=47621 GN=EPI10_015564 PE=3 SV=1","S","Function unknown","probable cytochrome c oxidase subunit 5C-1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c92658.graph_c0",16,1.35,26,1.85,27,2.07,55,4.79,59,5.12,91,6.68,0.000653158,1.197769791,"up","[L]","Replication, recombination and repair ","Molecular Function: single-stranded DNA binding (GO:0003697);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: chromosome (GO:0005694);; Biological Process: chromosome organization (GO:0051276);; ","K03111|5.1e-94|oeu:111381259|K03111 single-strand DNA-binding protein | (RefSeq) single-stranded DNA-binding protein, mitochondrial isoform X1","[L]","Replication, recombination and repair ","Single-strand binding protein family","Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1","SMC hinge domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_018878 PE=4 SV=1","L","Replication, recombination and repair","single-stranded DNA-binding protein, mitochondrial isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","DNA replication (ko03030);; Mismatch repair (ko03430);; Homologous recombination (ko03440)"]
["c98838.graph_c0",19,1.98,26,2.48,25,2.84,15,1.44,6,0.86,9,0.84,0.00505234,-1.442330181,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92816.graph_c0",0,0,0,0,0,0,27,0.8,29,1.01,21,0.64,6.03e-08,4.646999155,"up","--","--","--","--","--","--","--","Uncharacterized protein At1g65710 OS=Arabidopsis thaliana OX=3702 GN=At1g65710 PE=2 SV=1","uncharacterized protein At1g65710 OS=Capsicum annuum OX=4072 GN=LOC107859661 PE=4 SV=1","S","Function unknown","uncharacterized protein At1g65710-like [Olea europaea var. sylvestris]","--","--"]
["c87432.graph_c0",218,15.51,251,16.86,215,15.72,115,8.37,79,6.59,68,4.92,4.19e-18,-1.684908424,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_009581 PE=3 SV=1","--","--","uncharacterized protein LOC111407884 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99486.graph_c0",113,6.26,90,4.72,93,5.29,332,18.71,335,21.68,326,18.28,6.96e-18,1.415954505,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","SPARK","Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26171 PE=4 SV=1","S","Function unknown","uncharacterized GPI-anchored protein At4g28100-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102231.graph_c0",1,0.07,1,0.06,3,0.21,31,2.03,58,5.57,55,3.54,2.58e-10,3.936270861,"up","--","--","Biological Process: male meiotic nuclear division (GO:0007140);; Biological Process: female meiotic nuclear division (GO:0007143);; ","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_032043 PE=4 SV=1","--","--","protein XRI1-like isoform X1 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: cellular process (GO:0009987);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c83918.graph_c0",18,3.89,24,4.85,19,4.19,1,0.22,0,0,0,0,3.44e-08,-4.401954352,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117446.graph_c0",4,0.11,2,0.05,4,0.12,28,0.81,25,0.83,26,0.75,8.52e-05,2.369144671,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K13457|1.9e-86|mdm:114825146|K13457 disease resistance protein RPM1 | (RefSeq) disease resistance protein RPM1-like","[R]","General function prediction only ","Retrotransposon gag protein;; gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_042891 PE=4 SV=1","L","Replication, recombination and repair","PREDICTED: uncharacterized protein LOC109122249, partial [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Plant-pathogen interaction (ko04626)"]
["c97842.graph_c0",357,19.8,292,15.12,320,18.13,192,10.74,134,8.68,168,9.49,3.51e-17,-1.292237409,"down","--","--","Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; ","K11643|6.2e-17|oeu:111368604|K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12] | (RefSeq) CHD3-type chromatin-remodeling factor PICKLE-like","--","--","--","CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana OX=3702 GN=PKL PE=1 SV=1","Putative CHD3-type chromatin-remodeling factor PICKLE OS=Davidia involucrata OX=16924 GN=Din_034764 PE=4 SV=1","--","--","CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c112892.graph_c0",17,0.46,17,0.45,14,0.4,101,2.87,100,3.27,122,3.46,4.34e-14,2.360802972,"up","[S]","Function unknown ","Cellular Component: plasma membrane (GO:0005886);; Biological Process: response to iron ion (GO:0010039);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: seed development (GO:0048316);; Molecular Function: iron-nicotianamine transmembrane transporter activity (GO:0051980);; ","K15363|3.6e-36|bna:111210893|K15363 fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1] | (RefSeq) fanconi-associated nuclease 1 homolog","--","--","OPT oligopeptide transporter protein;; OPT oligopeptide transporter protein","Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana OX=3702 GN=YSL1 PE=2 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002430mg PE=4 SV=1","S","Function unknown","metal-nicotianamine transporter YSL1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: response to stimulus (GO:0050896);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c106428.graph_c0",14,0.9,15,0.9,13,0.85,92,6.13,99,7.51,97,6.37,6.78e-13,2.384099245,"up","--","--","Molecular Function: protein dimerization activity (GO:0046983);; ","K20558|1.6e-26|adu:107495120|K20558 transcription factor SPEECHLESS | (RefSeq) transcription factor SPEECHLESS","--","--","Helix-loop-helix DNA-binding domain","Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2","Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02655 PE=4 SV=1","K","Transcription","transcription factor bHLH94-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016)"]
["c115971.graph_c0",125,4.69,179,5.54,170,5.87,26,0.94,32,1.22,39,1.3,3.94e-25,-2.56887798,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: recognition of pollen (GO:0048544);; ","K24104|3.0e-51|thj:104799061|K24104 GPN-loop GTPase | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104799061","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; D-mannose binding lectin;; S-locus glycoprotein domain;; PAN-like domain","G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana OX=3702 GN=At1g11300 PE=2 SV=1","Receptor-like serine/threonine-protein kinase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001680mg PE=3 SV=1","T","Signal transduction mechanisms","PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 [Erythranthe guttata]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","--"]
["c107676.graph_c1",8,0.44,13,0.67,5,0.28,37,2.27,51,5.13,42,3.9,4.47e-05,1.897302515,"up","--","--","--","K03188|2.6e-26|dcr:108224146|K03188 urease accessory protein | (RefSeq) uncharacterized protein LOC108224146 isoform X1","--","--","Phloem protein 2","Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1","F-box domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09622 PE=4 SV=1","S","Function unknown","F-box protein PP2-B10-like [Olea europaea var. sylvestris]","--","--"]
["c112907.graph_c0",525,25.91,594,27.04,594,30.05,116,5.56,169,9.67,127,6.1,3.19e-56,-2.35600011,"down","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate transport (GO:0008643);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K24193|3.6e-132|oeu:111404192|K24193 MFS transporter, SP family, sugar:H+ symporter | (RefSeq) sugar carrier protein A-like","[R]","General function prediction only ","Sugar (and other) transporter;; Sugar (and other) transporter;; Major Facilitator Superfamily","Sugar carrier protein A OS=Ricinus communis OX=3988 GN=STA PE=2 SV=1","Sugar transport protein 7 OS=Dorcoceras hygrometricum OX=472368 GN=F511_11538 PE=3 SV=1","P","Inorganic ion transport and metabolism","sugar carrier protein A-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215)","--"]
["c103011.graph_c0",233,17,255,17.54,242,18.59,115,9.13,104,9.83,129,10.48,2.96e-18,-1.384587333,"down","--","--","--","K14595|3.2e-25|mtr:MTR_4g485640|K14595 abscisate beta-glucosyltransferase [EC:2.4.1.263] | (RefSeq) UDP-glucosyltransferase 73B2","--","--","CBS domain","CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CBSX2 PE=1 SV=1","Putative CBS domain, BRCT domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0256581 PE=4 SV=1","S","Function unknown","CBS domain-containing protein CBSX2, chloroplastic-like [Olea europaea var. sylvestris]","--","Carotenoid biosynthesis (ko00906)"]
["c103277.graph_c0",86,7.55,127,10.54,88,7.96,305,27.58,225,23.25,265,23.75,5.3e-09,1.070765311,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c113856.graph_c0",12,0.18,12,0.17,4,0.06,279,4.26,417,7.15,460,7.26,1.61e-54,4.903183459,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[T]","Signal transduction mechanisms ","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_047206 PE=4 SV=1","T","Signal transduction mechanisms","uncharacterized protein LOC111368103 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101464.graph_c1",12,4.86,25,9.35,33,13.45,66,27.42,46,22.01,93,38.17,0.00235218,1.158783533,"up","--","--","Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; ","K00627|4.4e-24|oeu:111405964|K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] | (RefSeq) dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic","[C]","Energy production and conversion ","--","Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LTA2 PE=2 SV=1","Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Dorcoceras hygrometricum OX=472368 GN=F511_23385 PE=3 SV=1","C","Energy production and conversion","dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Glycolysis / Gluconeogenesis (ko00010);; Citrate cycle (TCA cycle) (ko00020);; Pyruvate metabolism (ko00620);; Carbon metabolism (ko01200)"]
["c91164.graph_c0",115,6.74,117,6.59,113,6.92,462,27.15,504,33.69,570,33.48,2.97e-38,1.821712575,"up","--","--","Cellular Component: nucleus (GO:0005634);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: regulation of flower development (GO:0009909);; ","K12135|1.1e-20|csat:104735609|K12135 zinc finger protein CONSTANS | (RefSeq) zinc finger protein CONSTANS-like","[K]","Transcription ","B-box zinc finger","Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008870mg PE=3 SV=1","K","Transcription","zinc finger protein CONSTANS-LIKE 4-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; biological process: biological regulation (GO:0065007)","Circadian rhythm - plant (ko04712)"]
["c110693.graph_c0",16,0.85,7,0.37,5,0.36,34,1.89,63,4,80,4.39,1.78e-06,2.199386785,"up","--","--","Molecular Function: polygalacturonase activity (GO:0004650);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K01213|1.8e-81|nau:109243727|K01213 galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67] | (RefSeq) probable polygalacturonase At1g80170","--","--","Glycosyl hydrolases family 28;; Pectate lyase superfamily protein;; Glycosyl hydrolases family 28;; Glycosyl hydrolases family 28","Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana OX=3702 GN=At1g80170 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a007235mg PE=3 SV=1","G","Carbohydrate transport and metabolism","probable polygalacturonase At1g80170 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Pentose and glucuronate interconversions (ko00040)"]
["c99155.graph_c5",75,5.94,70,5.23,54,4.4,4,0.32,2,0.19,5,0.4,1.56e-18,-4.186747921,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103008.graph_c0",7,0.26,0,0,4,0.14,38,1.33,36,1.44,42,1.46,8.14e-07,2.776073555,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|4.7e-171|mcha:111019435|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 2.8-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 2.8 OS=Arabidopsis thaliana OX=3702 GN=NPF2.8 PE=2 SV=2","H+/oligopeptide symporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25366 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 2.8 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c111983.graph_c0",1271,35.88,1258,33.72,1103,32.04,3748,108.4,3631,120.53,4090,117.91,1.08e-107,1.335892008,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Molecular Function: 5S rRNA binding (GO:0008097);; ","K02932|6.0e-126|oeu:111382580|K02932 large subunit ribosomal protein L5e | (RefSeq) 60S ribosomal protein L5-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal large subunit proteins 60S L5, and 50S L18;; Ribosomal L18 C-terminal region","60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1","Ribosomal_L18_c domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_036304 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L5-like [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Ribosome (ko03010)"]
["c99742.graph_c0",2349,98.15,2788,110.18,2447,105.3,53,2.26,23,1.13,23,0.98,4.94e-76,-6.354279032,"down","--","--","Biological Process: lipid metabolic process (GO:0006629);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627);; ","K09591|1.1e-14|smo:SELMODRAFT_132835|K09591 steroid 5-alpha-reductase [EC:1.3.1.22] | (RefSeq) DET2A-1; hypothetical protein","[I]","Lipid transport and metabolism ","3-oxo-5-alpha-steroid 4-dehydrogenase","Polyprenol reductase 1 OS=Arabidopsis thaliana OX=3702 GN=PPRD1 PE=1 SV=1","S5A_REDUCTASE domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_13527 PE=3 SV=1","I","Lipid transport and metabolism","3-oxo-5-alpha-steroid 4-dehydrogenase 2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","Brassinosteroid biosynthesis (ko00905)"]
["c100555.graph_c0",82,4.01,18,0.83,17,0.86,6,0.3,16,0.92,10,0.5,0.00040289,-1.980957943,"down","--","--","Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: endoplasmic reticulum (GO:0005783);; Cellular Component: integral component of membrane (GO:0016021);; ","K06944|9.7e-49|aof:109820797|K06944 uncharacterized protein | (RefSeq) developmentally-regulated G-protein 2","[TU]","--","EF hand;; EF-hand domain pair;; EF-hand domain;; EF hand;; Secreted protein acidic and rich in cysteine Ca binding region","--","calumenin-A-like OS=Nicotiana tabacum OX=4097 GN=LOC107798723 PE=4 SV=1","--","--","reticulocalbin-2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98759.graph_c0",47,5.15,36,3.71,45,5.05,128,16.8,144,21.65,135,16.95,7.5e-08,1.326356827,"up","--","--","Biological Process: cell morphogenesis (GO:0000902);; Biological Process: cell morphogenesis involved in differentiation (GO:0000904);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: circadian rhythm (GO:0007623);; Biological Process: biological_process (GO:0008150);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: unidimensional cell growth (GO:0009826);; Biological Process: tissue development (GO:0009888);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cell tip growth (GO:0009932);; Biological Process: cellular process (GO:0009987);; Biological Process: root morphogenesis (GO:0010015);; Biological Process: root epidermal cell differentiation (GO:0010053);; Biological Process: trichoblast differentiation (GO:0010054);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: cellular component organization (GO:0016043);; Biological Process: cell growth (GO:0016049);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: developmental maturation (GO:0021700);; Biological Process: root system development (GO:0022622);; Biological Process: cell differentiation (GO:0030154);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: cellular component morphogenesis (GO:0032989);; Biological Process: growth (GO:0040007);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Molecular Function: sequence-specific DNA binding (GO:0043565);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: root development (GO:0048364);; Biological Process: cell development (GO:0048468);; Biological Process: cell maturation (GO:0048469);; Biological Process: rhythmic process (GO:0048511);; Biological Process: developmental cell growth (GO:0048588);; Biological Process: developmental growth (GO:0048589);; Biological Process: system development (GO:0048731);; Biological Process: trichoblast maturation (GO:0048764);; Biological Process: root hair cell differentiation (GO:0048765);; Biological Process: root hair elongation (GO:0048767);; Biological Process: root hair cell tip growth (GO:0048768);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: cellular developmental process (GO:0048869);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: cell division (GO:0051301);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: developmental growth involved in morphogenesis (GO:0060560);; Biological Process: biological regulation (GO:0065007);; Biological Process: anatomical structure maturation (GO:0071695);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: root hair cell development (GO:0080147);; Biological Process: plant epidermis development (GO:0090558);; Biological Process: plant epidermal cell differentiation (GO:0090627);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: plant organ development (GO:0099402);; Molecular Function: transcription regulator activity (GO:0140110);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: plant organ morphogenesis (GO:1905392);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K14494|1.1e-22|rcu:8276206|K14494 DELLA protein | (RefSeq) DELLA protein SLN1","--","--","GRAS domain family","Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1","GRAS domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17752 PE=3 SV=1","K","Transcription","scarecrow-like protein 6 isoform X1 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: developmental process (GO:0032502);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: multicellular organismal process (GO:0032501);; biological process: rhythmic process (GO:0048511);; biological process: growth (GO:0040007)","Plant hormone signal transduction (ko04075)"]
["c112294.graph_c0",576,11.69,637,11.91,569,11.93,367,7.72,319,7.76,353,7.39,1.22e-26,-1.097396337,"down","[V]","Defense mechanisms ","Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: ATPase activity (GO:0016887);; Molecular Function: ATPase-coupled transmembrane transporter activity (GO:0042626);; ","K05643|4.1e-67|dzi:111311499|K05643 ATP-binding cassette, subfamily A (ABC1), member 3 | (RefSeq) ABC transporter A family member 1 isoform X1","[IR]","--","ABC transporter;; AAA domain, putative AbiEii toxin, Type IV TA system","ABC transporter A family member 7 OS=Arabidopsis thaliana OX=3702 GN=ABCA7 PE=3 SV=2","ABC transporter domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_030125 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","ABC transporter A family member 7-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","ABC transporters (ko02010)"]
["c113223.graph_c0",35,2.26,42,3.59,36,2.33,118,10.17,91,8.68,111,11.58,1.11e-05,1.155766583,"up","--","--","Molecular Function: structural constituent of ribosome (GO:0003735);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","K13448|1.7e-25|oeu:111405567|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML13","[T]","Signal transduction mechanisms ","EF-hand domain pair;; EF hand;; EF-hand domain pair;; EF-hand domain","Probable calcium-binding protein CML13 OS=Arabidopsis thaliana OX=3702 GN=CML13 PE=2 SV=1","40S ribosomal protein S13 OS=Striga asiatica OX=4170 GN=STAS_25166 PE=3 SV=1","T","Signal transduction mechanisms","40S ribosomal protein S13 [Striga asiatica]","molecular function: structural molecule activity (GO:0005198);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Plant-pathogen interaction (ko04626)"]
["c88047.graph_c0",1,0.16,1,0.15,1,0.17,25,4.17,26,4.98,25,4.14,1.26e-06,3.51728102,"up","[J]","Translation, ribosomal structure and biogenesis ","Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: rRNA pseudouridine synthase activity (GO:0120159);; ","K06180|4.6e-87|oeu:111376711|K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] | (RefSeq) RNA pseudouridine synthase 2, chloroplastic isoform X1","[A]","RNA processing and modification ","S4 domain","RNA pseudouridine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g76050 PE=2 SV=1","RNA pseudouridylate synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25986 PE=3 SV=1","A","RNA processing and modification","RNA pseudouridine synthase 2, chloroplastic isoform X2 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c103513.graph_c0",115,7.93,101,6.57,74,5.24,390,27.5,381,30.78,455,31.9,2.83e-28,1.746219426,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);; Biological Process: protein folding (GO:0006457);; ","K01802|3.3e-94|oeu:111376878|K01802 peptidylprolyl isomerase [EC:5.2.1.8] | (RefSeq) peptidyl-prolyl cis-trans isomerase 1-like","[O]","Posttranslational modification, protein turnover, chaperones ","Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1","Peptidyl-prolyl cis-trans isomerase OS=Olea europaea OX=4146 PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","peptidyl-prolyl cis-trans isomerase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c113217.graph_c0",75,3.79,66,3.37,71,4.03,37,2.05,47,2.99,32,1.79,9.38e-05,-1.156923671,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c111125.graph_c0",27,0.93,41,1.34,25,0.89,83,2.92,124,5,150,5.25,9.14e-08,1.584184247,"up","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20562|3.8e-197|sind:105162333|K20562 biphenyl-4-hydroxylase | (RefSeq) cytochrome P450 CYP736A12-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Cytochrome P450","Cytochrome P450 71AU50 OS=Prunus mume OX=102107 GN=CYP71AU50 PE=2 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_41218 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 CYP736A12-like [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c112095.graph_c0",37237,2287.93,40818,2368.44,36975,2336.29,23314,1465.88,20643,1486.36,23053,1441.58,2.61e-140,-1.10131868,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: 1-aminocyclopropane-1-carboxylate oxidase activity (GO:0009815);; Molecular Function: metal ion binding (GO:0046872);; ","K05933|2.7e-116|oeu:111370655|K05933 aminocyclopropanecarboxylate oxidase [EC:1.14.17.4] | (RefSeq) 1-aminocyclopropane-1-carboxylate oxidase-like","[QR]","--","2OG-Fe(II) oxygenase superfamily","1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa OX=3627 GN=ACO PE=2 SV=1","1-aminocyclopropane-1-carboxylate oxidase-2 OS=Olea europaea OX=4146 PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","1-aminocyclopropane-1-carboxylate oxidase-2 [Olea europaea]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Cysteine and methionine metabolism (ko00270)"]
["c76971.graph_c0",27,10.15,26,9.05,37,14.04,14,5.4,14,6.22,17,6.48,0.004147364,-1.263805817,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117041.graph_c1",30,4.06,35,4.5,40,5.65,16,2.22,18,2.86,20,2.75,0.002394266,-1.230277803,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98437.graph_c0",6,0.34,9,0.54,3,0.21,26,1.24,47,2.47,59,2.71,3.71e-06,2.367194039,"up","--","--","--","--","--","--","Protein of unknown function (DUF620)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25382 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111395872 [Olea europaea var. sylvestris]","--","--"]
["c103945.graph_c0",74,6.95,64,5.81,55,5.23,185,18.84,198,22.6,202,19.7,4.04e-10,1.266996531,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c79743.graph_c0",940,45.99,231,10.68,224,11.28,173,8.65,61,3.5,111,5.52,0.004479816,-2.009239421,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Fasciclin domain","Fasciclin-like arabinogalactan protein 3 OS=Arabidopsis thaliana OX=3702 GN=FLA3 PE=2 SV=1","FAS1 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24402 PE=3 SV=1","S","Function unknown","fasciclin-like arabinogalactan protein 3 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c86493.graph_c0",72,2.05,61,1.64,67,1.97,3,0.09,5,0.17,0,0,1.01e-18,-4.538513116,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114285.graph_c0",182,8.27,167,7.15,138,6.42,412,19.29,450,24.34,537,25.93,3.41e-17,1.193710372,"up","--","--","Cellular Component: chromosome, telomeric region (GO:0000781);; Molecular Function: histone acetyltransferase activity (GO:0004402);; Cellular Component: nucleus (GO:0005634);; Biological Process: chromatin silencing at telomere (GO:0006348);; ","K11303|4.1e-241|oeu:111404157|K11303 histone acetyltransferase 1 [EC:2.3.1.48] | (RefSeq) histone acetyltransferase type B catalytic subunit","[B]","Chromatin structure and dynamics ","Histone acetyl transferase HAT1 N-terminus;; Acetyltransferase (GNAT) family","Histone acetyltransferase type B catalytic subunit OS=Arabidopsis thaliana OX=3702 GN=HAG2 PE=2 SV=1","Histone acetyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12861 PE=3 SV=1","B","Chromatin structure and dynamics","histone acetyltransferase type B catalytic subunit [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c107289.graph_c1",30,3.06,43,4.22,35,3.33,18,1.71,17,1.59,27,2.57,0.006598181,-1.082482855,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108677.graph_c0",2502,54.04,2707,55.17,2551,56.73,258,6.19,242,6.07,247,5.51,0,-3.692268277,"down","[K]","Transcription ","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-directed 5'-3' RNA polymerase activity (GO:0003899);; Biological Process: transcription, DNA-templated (GO:0006351);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: ribonucleoside binding (GO:0032549);; ","K03043|1.6e-136|sly:3950478|K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] | (RefSeq) rpoB, LyesC2p077; RNA polymerase beta subunit","[K]","Transcription ","RNA polymerase Rpb2, domain 7","DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB PE=3 SV=1","DNA-directed RNA polymerase subunit beta OS=Syringa pinnatifolia OX=149022 GN=rpoB PE=3 SV=1","K","Transcription","RNA polymerase beta subunit [Syringa reticulata subsp. pekinensis]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","RNA polymerase (ko03020)"]
["c104266.graph_c0",53,2.14,50,1.88,46,1.88,215,9.06,175,8.07,228,9.37,1.46e-16,1.705487401,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: transcription regulator activity (GO:0140110);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","--","[K]","Transcription ","--","Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18199 PE=4 SV=1","K","Transcription","trihelix transcription factor GTL1-like [Olea europaea var. sylvestris]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007)","--"]
["c61637.graph_c0",579,118.54,595,113.96,483,100.87,49,10.29,45,10.84,63,13.11,6.92e-119,-3.69601316,"down","--","--","--","--","--","--","--","Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1","Late embryogenesis abundant protein Dc3 OS=Capsicum baccatum OX=33114 GN=CQW23_11751 PE=4 SV=1","--","--","Late embryogenesis abundant protein Dc3 [Capsicum baccatum]","--","--"]
["c116068.graph_c0",337,4.82,323,4.38,301,4.45,29,0.84,20,1.26,38,0.62,2.9e-73,-3.747387028,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: signal transduction (GO:0007165);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; Molecular Function: ADP binding (GO:0043531);; ","K03006|2.6e-60|adu:107466525|K03006 DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] | (RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00016 PE=4 SV=1","T","Signal transduction mechanisms","hypothetical protein GOBAR_AA00016 [Gossypium barbadense]","molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; biological process: metabolic process (GO:0008152)","RNA polymerase (ko03020)"]
["c99842.graph_c0",191,14.96,68,5.03,56,4.59,50,4.01,21,1.93,18,1.47,0.005030183,-1.870337214,"down","--","--","Molecular Function: enzyme inhibitor activity (GO:0004857);; ","--","--","--","Plant invertase/pectin methylesterase inhibitor","--","PMEI domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06194 PE=4 SV=1","--","--","hypothetical protein CDL12_06194 [Handroanthus impetiginosus]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c103261.graph_c0",54,2.92,74,3.78,45,2.48,390,21.69,388,24.67,464,26.59,1.36e-46,2.502093451,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13429|2.9e-45|smo:SELMODRAFT_443457|K13429 chitin elicitor receptor kinase 1 | (RefSeq) hypothetical protein","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain","LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana OX=3702 GN=LYK3 PE=2 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01212 PE=4 SV=1","T","Signal transduction mechanisms","lysM domain receptor-like kinase 3 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97873.graph_c0",287,8.56,319,8.98,272,8.34,154,4.68,154,5.36,198,5.99,1.31e-14,-1.113003267,"down","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K22683|1.4e-62|dcr:108209791|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Aspartyl protease family protein 2 OS=Arabidopsis thaliana OX=3702 GN=APF2 PE=2 SV=1","Aspartyl protease OS=Handroanthus impetiginosus OX=429701 GN=CDL12_30239 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartyl protease family protein At5g10770-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c105453.graph_c2",83,4.12,76,3.66,92,4.97,56,3.04,52,2.67,38,2.11,8.76e-05,-1.079224117,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c76337.graph_c0",6,1.29,13,2.62,5,1.1,103,22.76,93,23.58,99,21.68,1.39e-16,3.164404581,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: zinc ion binding (GO:0008270);; Biological Process: lignin biosynthetic process (GO:0009809);; Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);; Molecular Function: cinnamyl-alcohol dehydrogenase activity (GO:0045551);; ","K23232|4.4e-22|oeu:111373464|K23232 8-hydroxygeraniol dehydrogenase [EC:1.1.1.324] | (RefSeq) 8-hydroxygeraniol dehydrogenase-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","--","Geraniol dehydrogenase 1 OS=Ocimum basilicum OX=39350 GN=GEDH1 PE=1 SV=1","PKS_ER domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a008879mg PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","geraniol dehydrogenase 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Monoterpenoid biosynthesis (ko00902)"]
["c110105.graph_c2",3,0.22,0,0,2,0.15,64,4.73,44,3.69,41,3.16,8.78e-11,3.990004002,"up","--","--","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: nucleotide-excision repair (GO:0006289);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Cellular Component: host cell nucleus (GO:0042025);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K13116|1.3e-20|pda:103723897|K13116 ATP-dependent RNA helicase DDX41 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 35-like","[R]","General function prediction only ","Chromo (CHRromatin Organisation MOdifier) domain;; Retroviral aspartyl protease","--","Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004373 PE=4 SV=1","E","Amino acid transport and metabolism","hypothetical protein EZV62_004373 [Acer yangbiense]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","--"]
["c106969.graph_c0",5,0.11,6,0.13,1,0.02,18,0.41,25,0.66,30,0.68,0.000903379,2.041640942,"up","--","--","--","K22262|7.9e-106|qsu:112034235|K22262 WD repeat and FYVE domain-containing protein 3 | (RefSeq) protein SPIRRIG","[R]","General function prediction only ","PPR repeat;; PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain","Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17993 PE=4 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At1g18485-like [Olea europaea var. sylvestris]","--","--"]
["c104006.graph_c0",29,1.4,23,1.35,28,1.84,66,3.69,79,5.49,75,4.39,0.000506452,1.108662737,"up","--","--","--","K11592|1.1e-26|smo:SELMODRAFT_444049|K11592 endoribonuclease Dicer [EC:3.1.26.-] | (RefSeq) hypothetical protein","[S]","Function unknown ","--","--","TOG domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_021188 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","uncharacterized protein LOC111409334 [Olea europaea var. sylvestris]","--","--"]
["c105366.graph_c1",889,38.4,915,35.23,970,42.31,537,26.98,522,27.59,473,22.5,4.29e-30,-1.173434747,"down","--","--","--","K15082|1.0e-70|oeu:111407459|K15082 DNA repair protein RAD7 | (RefSeq) uncharacterized protein LOC111407459","--","--","--","--","F-box/LRR-repeat protein 15 OS=Striga asiatica OX=4170 GN=STAS_11642 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111375954, partial [Olea europaea var. sylvestris]","--","--"]
["c91151.graph_c0",6,0.32,9,0.46,6,0.33,52,2.87,60,3.77,84,4.58,2.56e-10,2.740699002,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: zinc ion binding (GO:0008270);; ","K11838|5.3e-12|oeu:111399993|K11838 ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like","--","--","gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Putative RNA-directed DNA polymerase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr8g0351181 PE=4 SV=1","L","Replication, recombination and repair","putative RNA-directed DNA polymerase [Medicago truncatula]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c103745.graph_c1",105,2.16,128,2.5,113,2.4,16,0.35,22,0.53,32,0.67,4.31e-20,-2.5736147,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09287|1.7e-167|oeu:111373124|K09287 RAV-like factor | (RefSeq) AP2/ERF and B3 domain-containing transcription factor At1g51120-like","--","--","B3 DNA binding domain;; AP2 domain","AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana OX=3702 GN=At1g51120 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_030341 PE=3 SV=1","K","Transcription","AP2/ERF and B3 domain-containing transcription factor At1g51120-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c87072.graph_c0",0,0,0,0,0,0,38,3.46,19,1.98,26,2.35,3.31e-08,4.716851771,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108180.graph_c2",62,8.95,49,7.01,55,9.13,17,3.12,12,2.72,18,3.35,9.91e-09,-2.073396466,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15511 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111389566 [Olea europaea var. sylvestris]","--","--"]
["c86378.graph_c0",43,4.87,39,4.16,38,4.42,14,1.62,15,2,26,3.05,0.000370954,-1.397794136,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c105651.graph_c2",26,3.1,26,2.9,23,2.74,99,11.01,127,16.2,137,15.2,1.41e-11,1.912243929,"up","--","--","Cellular Component: endoplasmic reticulum (GO:0005783);; ","--","--","--","--","--","Mediator of RNA polymerase II transcription subunit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24188 PE=4 SV=1","--","--","uncharacterized protein LOC111384982 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c99422.graph_c1",217,6.61,189,6.38,159,5.17,97,4.14,113,5.06,121,4.61,5.07e-09,-1.080918871,"down","--","--","--","K22285|1.8e-141|oeu:111412168|K22285 oxysterol-binding protein-related protein 8 | (RefSeq) oxysterol-binding protein-related protein 4B-like","[T]","Signal transduction mechanisms ","Oxysterol-binding protein","Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana OX=3702 GN=ORP4C PE=2 SV=1","Oxysterol-binding protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10553 PE=3 SV=1","T","Signal transduction mechanisms","oxysterol-binding protein-related protein 4B-like [Olea europaea var. sylvestris]","--","--"]
["c72589.graph_c0",238,22.29,303,26.69,231,22.11,15,1.42,33,3.59,51,4.81,6.33e-14,-3.127354478,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017348mg PE=4 SV=1","S","Function unknown","hypothetical protein MIMGU_mgv1a017348mg [Erythranthe guttata]","--","--"]
["c117690.graph_c0",37,0.83,52,0.91,48,1.16,9,0.14,16,0.7,12,0.44,2.28e-07,-2.102774409,"down","--","--","Molecular Function: ADP binding (GO:0043531);; ","K15078|2.0e-60|tcc:18614561|K15078 structure-specific endonuclease subunit SLX1 [EC:3.6.1.-] | (RefSeq) putative disease resistance protein RGA3","[T]","Signal transduction mechanisms ","Leucine Rich repeats (2 copies);; NB-ARC domain","Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1","Apoptotic ATPase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19702 PE=4 SV=1","T","Signal transduction mechanisms","Apoptotic ATPase [Handroanthus impetiginosus]","molecular function: binding (GO:0005488)","--"]
["c106844.graph_c0",5,0.16,7,0.21,3,0.1,30,3.05,14,1.76,22,2.5,0.007612577,1.625915207,"up","--","--","--","--","--","--","Protein of unknown function (DUF1635)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26764 PE=4 SV=1","--","--","uncharacterized protein LOC111402776 [Olea europaea var. sylvestris]","--","--"]
["c103565.graph_c1",65,2.53,65,2.66,80,2.8,40,1.5,39,1.65,41,1.46,0.000113477,-1.10923545,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: calcium ion binding (GO:0005509);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: mRNA processing (GO:0006397);; ","K13448|1.4e-20|bdi:100842693|K13448 calcium-binding protein CML | (RefSeq) probable calcium-binding protein CML50","[T]","Signal transduction mechanisms ","Survival motor neuron protein (SMN);; EF-hand domain pair;; EF hand;; EF-hand domain;; EF hand;; EF-hand domain pair","--","Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G164670 PE=4 SV=1","T","Signal transduction mechanisms","hypothetical protein PLICRDRAFT_150222 [Plicaturopsis crispa FD-325 SS-3]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Plant-pathogen interaction (ko04626)"]
["c117455.graph_c0",38,0.53,43,0.57,25,0.36,122,1.74,78,1.28,108,1.54,3.1e-05,1.189465859,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Cellular Component: retrotransposon nucleocapsid (GO:0000943);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: DNA-directed DNA polymerase activity (GO:0003887);; Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: ribonuclease activity (GO:0004540);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: RNA-dependent DNA biosynthetic process (GO:0006278);; Biological Process: proteolysis (GO:0006508);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: peptidase activity (GO:0008233);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: cellular process (GO:0009987);; Biological Process: DNA integration (GO:0015074);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: nucleotidyltransferase activity (GO:0016779);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: transposition (GO:0032196);; Biological Process: transposition, RNA-mediated (GO:0032197);; Molecular Function: DNA polymerase activity (GO:0034061);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Biological Process: RNA phosphodiester bond hydrolysis (GO:0090501);; Molecular Function: organic cyclic compound binding (GO:0097159);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Molecular Function: catalytic activity, acting on DNA (GO:0140097);; Molecular Function: catalytic activity, acting on RNA (GO:0140098);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Molecular Function: heterocyclic compound binding (GO:1901363);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K03517|1.2e-132|oeu:111407624|K03517 quinolinate synthase [EC:2.5.1.72] | (RefSeq) quinolinate synthase, chloroplastic","[R]","General function prediction only ","Fe-S metabolism associated domain;; Retrotransposon gag protein;; Retroviral aspartyl protease;; gag-polyprotein putative aspartyl protease;; Aspartyl protease;; Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase","Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QS PE=1 SV=1","Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00370 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c89520.graph_c0",54,2.28,25,1.07,21,0.86,349,16.07,478,24.32,575,23.27,9.34e-15,3.307126765,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K23260|1.2e-77|rcu:8288160|K23260 scopoletin glucosyltransferase [EC:2.4.1.128] | (RefSeq) scopoletin glucosyltransferase","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 90A1 OS=Arabidopsis thaliana OX=3702 GN=UGT90A1 PE=2 SV=1","Glycosyltransferase OS=Coffea canephora OX=49390 GN=GSCOC_T00003261001 PE=3 SV=1","--","--","UDP-glycosyltransferase 90A1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Phenylpropanoid biosynthesis (ko00940)"]
["c109865.graph_c0",11414,476.62,12932,503.04,11319,480.08,3160,131.79,2950,137.46,3468,141.74,0,-2.218106649,"down","[V]","Defense mechanisms ","Molecular Function: antiporter activity (GO:0015297);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K03327|2.8e-258|oeu:111393387|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 55","[R]","General function prediction only ","MatE","Protein DETOXIFICATION 55 OS=Arabidopsis thaliana OX=3702 GN=DTX55 PE=2 SV=1","Protein DETOXIFICATION OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24649 PE=3 SV=1","V","Defense mechanisms","protein DETOXIFICATION 55 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c114916.graph_c2",146,5.34,140,4.61,94,3.29,64,2.62,65,2.99,74,2.94,1.13e-07,-1.205444199,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107837.graph_c0",103,2.91,116,4.12,116,3.05,300,8.61,250,8.34,309,8.41,1.92e-10,1.024792253,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K13420|2.2e-43|ppp:112280767|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase FLS2 isoform X1","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","Receptor protein kinase-like protein ZAR1 OS=Arabidopsis thaliana OX=3702 GN=ZAR1 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25269 PE=3 SV=1","T","Signal transduction mechanisms","receptor protein kinase-like protein ZAR1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016)"]
["c116643.graph_c0",41,1.3,58,2.22,38,1.05,128,4.27,114,4.27,150,4.52,1.54e-06,1.175138354,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117906.graph_c1",718,12.35,632,9.03,533,8.49,7,0.42,3,0.06,2,0.04,1.16e-82,-7.266030927,"down","--","--","Molecular Function: RNA-directed DNA polymerase activity (GO:0003964);; ","K00820|1.3e-33|nta:107787623|K00820 glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] | (RefSeq) glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like","[R]","General function prediction only ","Retrotransposon gag protein;; Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; RNase H-like domain found in reverse transcriptase","--","Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_03826 PE=4 SV=1","L","Replication, recombination and repair","reverse transcriptase [Corchorus capsularis]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Alanine, aspartate and glutamate metabolism (ko00250);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c103721.graph_c0",21,1.08,26,1.14,37,1.81,73,3.43,74,4.07,91,4.08,0.000335767,1.140342915,"up","--","--","--","--","--","--","Carbohydrate esterase, sialic acid-specific acetylesterase","Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2","probable carbohydrate esterase At4g34215 OS=Capsicum annuum OX=4072 GN=LOC107875759 PE=4 SV=1","S","Function unknown","probable carbohydrate esterase At4g34215 [Olea europaea var. sylvestris]","--","--"]
["c110506.graph_c0",36,6.33,35,3.57,38,3.58,4,0.36,7,0.72,6,0.97,9.4e-09,-2.795380814,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Manihot esculenta OX=3983 GN=MANES_07G057900 PE=4 SV=1","--","--","hypothetical protein MANES_07G057900, partial [Manihot esculenta]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107234.graph_c0",3,0.09,0,0,1,0.04,22,0.78,49,1.88,52,1.75,5.77e-09,3.89787177,"up","--","--","--","--","--","--","--","--","Putative glutamic acid-rich protein OS=Davidia involucrata OX=16924 GN=Din_039781 PE=4 SV=1","--","--","serine/threonine-protein kinase pakB-like [Olea europaea var. sylvestris]","--","--"]
["c101367.graph_c1",55,3.03,61,3.18,46,2.61,10,0.56,11,0.71,10,0.56,4.06e-11,-2.585544183,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; Molecular Function: kinase activity (GO:0016301);; ","K12447|9.4e-59|boe:106336398|K12447 UDP-sugar pyrophosphorylase [EC:2.7.7.64] | (RefSeq) uncharacterized protein LOC106336398","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002210 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC111392479 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","Pentose and glucuronate interconversions (ko00040);; Galactose metabolism (ko00052);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c105645.graph_c0",13,1.27,21,1.78,24,2.36,59,8.81,61,12.85,65,7.07,0.000284929,1.303121559,"up","--","--","--","--","--","--","--","--","--","--","--","neutral ceramidase 3-like [Olea europaea var. sylvestris]","--","--"]
["c103220.graph_c0",101,2.96,73,1.92,91,2.55,248,6.72,194,5.95,264,7.3,1.47e-08,1.071731245,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K01180|8.3e-35|cmax:111487562|K01180 endo-1,3(4)-beta-glucanase [EC:3.2.1.6] | (RefSeq) uncharacterized protein LOC111487562","[T]","Signal transduction mechanisms ","Protein tyrosine and serine/threonine kinase","Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1","Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_007215 PE=4 SV=1","T","Signal transduction mechanisms","proline-rich receptor-like protein kinase PERK9 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111104.graph_c0",91,4.68,106,5.83,78,4.72,256,10.65,216,9.84,304,12.74,5.78e-11,1.160879567,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: response to reactive oxygen species (GO:0000302);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: cytochrome-c peroxidase activity (GO:0004130);; Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: extracellular region (GO:0005576);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: response to stress (GO:0006950);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: response to toxic substance (GO:0009636);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: seed germination (GO:0009845);; Biological Process: cellular process (GO:0009987);; Biological Process: fruit development (GO:0010154);; Biological Process: seed maturation (GO:0010431);; Molecular Function: antioxidant activity (GO:0016209);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: oxidoreductase activity, acting on peroxide as acceptor (GO:0016684);; Biological Process: antibiotic metabolic process (GO:0016999);; Biological Process: antibiotic catabolic process (GO:0017001);; Biological Process: drug metabolic process (GO:0017144);; Molecular Function: heme binding (GO:0020037);; Biological Process: developmental maturation (GO:0021700);; Biological Process: reproductive process (GO:0022414);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: multicellular organism reproduction (GO:0032504);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular response to oxidative stress (GO:0034599);; Biological Process: response to chemical (GO:0042221);; Biological Process: drug catabolic process (GO:0042737);; Biological Process: hydrogen peroxide metabolic process (GO:0042743);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: cellular catabolic process (GO:0044248);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: seed development (GO:0048316);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: multicellular organismal reproductive process (GO:0048609);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: response to stimulus (GO:0050896);; Biological Process: obsolete cofactor metabolic process (GO:0051186);; Biological Process: obsolete cofactor catabolic process (GO:0051187);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: reproductive system development (GO:0061458);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: anatomical structure maturation (GO:0071695);; Biological Process: reactive oxygen species metabolic process (GO:0072593);; Biological Process: seedling development (GO:0090351);; Biological Process: cellular response to toxic substance (GO:0097237);; Biological Process: detoxification (GO:0098754);; Biological Process: cellular oxidant detoxification (GO:0098869);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular detoxification (GO:1990748);; ","K00434|1.7e-35|oeu:111387515|K00434 L-ascorbate peroxidase [EC:1.11.1.11] | (RefSeq) putative L-ascorbate peroxidase 6 isoform X1","--","--","--","Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana OX=3702 GN=APX6 PE=2 SV=1","Peroxidase OS=Glycine max OX=3847 GN=100792735 PE=3 SV=1","P","Inorganic ion transport and metabolism","putative L-ascorbate peroxidase 6 isoform X4 [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: response to stimulus (GO:0050896);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: detoxification (GO:0098754);; cellular component: extracellular region (GO:0005576);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: multicellular organismal process (GO:0032501);; molecular function: binding (GO:0005488)","Ascorbate and aldarate metabolism (ko00053);; Glutathione metabolism (ko00480)"]
["c99967.graph_c0",102,2.59,93,2.23,101,2.53,378,10.15,353,10.49,396,10.21,1.02e-25,1.594268175,"up","--","--","Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: phospholipid metabolic process (GO:0006644);; Biological Process: glycerophospholipid metabolic process (GO:0006650);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: cellular process (GO:0009987);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: lipid modification (GO:0030258);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular lipid metabolic process (GO:0044255);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: glycerolipid metabolic process (GO:0046486);; Biological Process: phosphatidylinositol metabolic process (GO:0046488);; Biological Process: lipid phosphorylation (GO:0046834);; Biological Process: phosphatidylinositol phosphorylation (GO:0046854);; Biological Process: localization (GO:0051179);; Biological Process: cellular localization (GO:0051641);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: organic substance metabolic process (GO:0071704);; Cellular Component: cell periphery (GO:0071944);; Biological Process: protein localization to membrane (GO:0072657);; Biological Process: protein localization to plasma membrane (GO:0072659);; Biological Process: protein localization to cell periphery (GO:1990778);; ","K21843|1.6e-308|oeu:111391662|K21843 tetratricopeptide repeat protein 7 | (RefSeq) protein NPGR2-like","[T]","Signal transduction mechanisms ","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; TPR repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Protein NPGR2 OS=Arabidopsis thaliana OX=3702 GN=NPGR2 PE=1 SV=1","Putative tetratricopeptide repeat protein 7A-like OS=Davidia involucrata OX=16924 GN=Din_025107 PE=4 SV=1","T","Signal transduction mechanisms","protein NPGR2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: localization (GO:0051179);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c108212.graph_c0",435,18.88,457,19.14,396,16.92,238,9.74,181,8.38,218,9.03,1.05e-26,-1.3337168,"down","[J]","Translation, ribosomal structure and biogenesis ","Cellular Component: integral component of membrane (GO:0016021);; ","K02518|5.6e-36|han:4055694|K02518 translation initiation factor IF-1 | (RefSeq) infA, HeanCp057; translation initiation factor 1","--","--","Translation initiation factor 1A / IF-1","Translation initiation factor IF-1, chloroplastic OS=Fouquieria splendens OX=13533 GN=infA PE=3 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00031093001 PE=4 SV=1","--","--","transmembrane protein 128-like [Coffea arabica]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101674.graph_c0",341,19.15,362,18.8,288,16.53,167,8.8,143,8.31,152,7.89,2.96e-23,-1.412731745,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: double-stranded RNA binding (GO:0003725);; ","--","[J]","Translation, ribosomal structure and biogenesis ","Telomere recombination","--","uncharacterized protein YciO-like OS=Nicotiana tabacum OX=4097 GN=LOC107781033 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111373951 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c102859.graph_c0",62,3.13,47,3.18,54,3.06,181,8.99,201,11.46,191,9.49,6.26e-12,1.475224125,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of membrane (GO:0016021);; ","K00430|6.8e-110|nta:107817021|K00430 peroxidase [EC:1.11.1.7] | (RefSeq) peroxidase P7-like","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Peroxidase","Peroxidase 52 OS=Arabidopsis thaliana OX=3702 GN=PER52 PE=2 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00016869001 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase PBS1, partial [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: membrane part (GO:0044425)","Phenylpropanoid biosynthesis (ko00940)"]
["c93709.graph_c0",55,3.34,55,3.33,51,3.08,174,10.74,142,10.1,189,11.33,1.13e-09,1.305625511,"up","--","--","Molecular Function: transcription coregulator activity (GO:0003712);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","--","--","--","--","--","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_025337 PE=4 SV=1","--","--","uncharacterized protein LOC111382085 [Olea europaea var. sylvestris]","molecular function: transcription factor activity, protein binding (GO:0000988);; biological process: biological regulation (GO:0065007)","--"]
["c109413.graph_c0",235,7.1,225,6.84,208,6.37,1118,33.44,964,33.64,1158,34.79,2.06e-85,1.948047754,"up","--","--","Molecular Function: Rho guanyl-nucleotide exchange factor activity (GO:0005089);; ","--","--","--","PRONE (Plant-specific Rop nucleotide exchanger)","Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2","Rop guanine nucleotide exchange factor OS=Striga asiatica OX=4170 GN=STAS_19148 PE=4 SV=1","G","Carbohydrate transport and metabolism","rop guanine nucleotide exchange factor 1 [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007)","--"]
["c116784.graph_c1",133,2.39,191,3.46,189,4.61,515,10.01,440,9.69,543,10.58,1.89e-17,1.212349883,"up","--","--","Molecular Function: diphthine-ammonia ligase activity (GO:0017178);; Biological Process: peptidyl-diphthamide biosynthetic process from peptidyl-histidine (GO:0017183);; ","K06927|5.7e-195|oeu:111403848|K06927 diphthine-ammonia ligase [EC:6.3.1.14] | (RefSeq) diphthine--ammonia ligase isoform X1","[J]","Translation, ribosomal structure and biogenesis ","Diphthamide synthase;; Endoribonuclease L-PSP;; Diphthamide synthase","--","Diphthamide synthase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001792mg PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","diphthine--ammonia ligase isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007)","--"]
["c100179.graph_c0",4,0.13,1,0.03,0,0,66,2.28,118,4.66,126,4.36,1.56e-18,5.003734011,"up","[DPM]","--","Molecular Function: ferroxidase activity (GO:0004322);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: iron ion transport (GO:0006826);; Biological Process: lignin catabolic process (GO:0046274);; Cellular Component: apoplast (GO:0048046);; Molecular Function: hydroquinone:oxygen oxidoreductase activity (GO:0052716);; Biological Process: iron ion homeostasis (GO:0055072);; ","K05909|1.1e-303|oeu:111405985|K05909 laccase [EC:1.10.3.2] | (RefSeq) laccase-22-like","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Multicopper oxidase;; Multicopper oxidase;; Multicopper oxidase","Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2","Laccase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003880mg PE=3 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","laccase-22-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; cellular component: extracellular region (GO:0005576);; biological process: biological regulation (GO:0065007)","--"]
["c100588.graph_c0",11,1.36,20,1.84,12,1.2,43,5.15,50,6.55,42,5.17,0.002124754,1.280069218,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; ","K08857|1.3e-07|cann:107863793|K08857 NIMA (never in mitosis gene a)-related kinase 1/4/5 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase Nek2-like","[R]","General function prediction only ","--","Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1","Serine/threonine-protein kinase Nek3 OS=Artemisia annua OX=35608 GN=CTI12_AA477830 PE=4 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase Nek2 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c97210.graph_c0",52,2.29,40,1.67,25,1.13,129,5.87,189,9.95,252,11.54,1.75e-12,1.922718739,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Cotton fibre expressed protein","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02420 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111365358 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99217.graph_c0",34,1.95,27,1.45,22,1.65,0,0,0,0,0,0,1.82e-10,-5.257121264,"down","[L]","Replication, recombination and repair ","Biological Process: telomere maintenance (GO:0000723);; Molecular Function: DNA helicase activity (GO:0003678);; Molecular Function: ATP binding (GO:0005524);; Biological Process: DNA repair (GO:0006281);; Biological Process: DNA recombination (GO:0006310);; ","K15255|6.4e-202|oeu:111373369|K15255 ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] | (RefSeq) uncharacterized protein LOC111373369","[D]","Cell cycle control, cell division, chromosome partitioning ","PIF1-like helicase;; AAA domain","--","ATP-dependent DNA helicase OS=Trema orientale OX=63057 GN=TorRG33x02_256560 PE=3 SV=1","D","Cell cycle control, cell division, chromosome partitioning","uncharacterized protein LOC111369126 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: response to stimulus (GO:0050896)","--"]
["c113191.graph_c0",8832,169.31,10291,187,8653,171.43,3384,71.6,3719,93.6,4285,90.83,1.25e-123,-1.605026379,"down","--","--","Cellular Component: ubiquitin ligase complex (GO:0000151);; Molecular Function: p53 binding (GO:0002039);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; Molecular Function: signaling receptor binding (GO:0005102);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: cytosol (GO:0005829);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: regulation of catabolic process (GO:0009894);; Biological Process: positive regulation of catabolic process (GO:0009896);; Biological Process: cellular process (GO:0009987);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: protein ubiquitination (GO:0016567);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring acyl groups (GO:0016746);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: protein metabolic process (GO:0019538);; Molecular Function: ubiquitin-like protein transferase activity (GO:0019787);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: regulation of proteolysis (GO:0030162);; Biological Process: protein catabolic process (GO:0030163);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular catabolic process (GO:0031329);; Biological Process: positive regulation of cellular catabolic process (GO:0031331);; Biological Process: regulation of protein ubiquitination (GO:0031396);; Biological Process: positive regulation of protein ubiquitination (GO:0031398);; Biological Process: regulation of protein modification process (GO:0031399);; Biological Process: positive regulation of protein modification process (GO:0031401);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: regulation of cellular protein metabolic process (GO:0032268);; Biological Process: positive regulation of cellular protein metabolic process (GO:0032270);; Biological Process: regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032434);; Biological Process: positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: protein modification process (GO:0036211);; Biological Process: regulation of protein catabolic process (GO:0042176);; Molecular Function: identical protein binding (GO:0042802);; Molecular Function: protein homodimerization activity (GO:0042803);; Molecular Function: ion binding (GO:0043167);; Molecular Function: cation binding (GO:0043169);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: positive regulation of protein catabolic process (GO:0045732);; Biological Process: positive regulation of proteolysis (GO:0045862);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: transition metal ion binding (GO:0046914);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of protein metabolic process (GO:0051246);; Biological Process: positive regulation of protein metabolic process (GO:0051247);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: protein autoubiquitination (GO:0051865);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: regulation of proteasomal protein catabolic process (GO:0061136);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: regulation of primary metabolic process (GO:0080090);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: positive regulation of proteasomal protein catabolic process (GO:1901800);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: regulation of proteolysis involved in cellular protein catabolic process (GO:1903050);; Biological Process: positive regulation of proteolysis involved in cellular protein catabolic process (GO:1903052);; Biological Process: regulation of protein modification by small protein conjugation or removal (GO:1903320);; Biological Process: positive regulation of protein modification by small protein conjugation or removal (GO:1903322);; Biological Process: regulation of cellular protein catabolic process (GO:1903362);; Biological Process: positive regulation of cellular protein catabolic process (GO:1903364);; Cellular Component: transferase complex (GO:1990234);; Biological Process: regulation of ubiquitin-dependent protein catabolic process (GO:2000058);; Biological Process: positive regulation of ubiquitin-dependent protein catabolic process (GO:2000060);; ","K10144|4.6e-128|oeu:111383173|K10144 RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27] | (RefSeq) probable E3 ubiquitin-protein ligase RZFP34","[R]","General function prediction only ","Zinc-ribbon;; Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; zinc-RING finger domain;; RING-type zinc-finger;; Zinc finger, C3HC4 type (RING finger);; CHY zinc finger","Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica OX=39947 GN=RZFP34 PE=2 SV=1","Putative RING finger and CHY zinc finger domain-containing protein 1 OS=Davidia involucrata OX=16924 GN=Din_028650 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable E3 ubiquitin-protein ligase RZFP34 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: organelle (GO:0043226);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle part (GO:0044422);; biological process: biological regulation (GO:0065007)","Ubiquitin mediated proteolysis (ko04120)"]
["c117372.graph_c1",1108,61.26,1407,74.45,1273,73.58,74,2.01,51,1.57,82,2.35,3.43e-235,-4.496249262,"down","--","--","--","K22422|3.7e-23|aof:109833690|K22422 protein downstream neighbor of Son | (RefSeq) uncharacterized protein LOC109833690","--","--","TNP1/EN/SPM transposase","--","Transposase_23 domain-containing protein OS=Morus notabilis OX=981085 GN=L484_017777 PE=4 SV=1","S","Function unknown","hypothetical protein L484_017777 [Morus notabilis]","--","--"]
["c116522.graph_c1",0,0,0,0,2,0.15,53,2.46,71,4.75,85,4.1,2.29e-14,5.170353988,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: cellulase activity (GO:0008810);; Biological Process: cellulose catabolic process (GO:0030245);; ","K01179|4.5e-261|sind:105159864|K01179 endoglucanase [EC:3.2.1.4] | (RefSeq) endoglucanase 8","--","--","Glycosyl hydrolase family 9","Endoglucanase 8 OS=Arabidopsis thaliana OX=3702 GN=CEL1 PE=2 SV=1","Endoglucanase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05552 PE=3 SV=1","G","Carbohydrate transport and metabolism","endoglucanase 8 [Sesamum indicum]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Starch and sucrose metabolism (ko00500)"]
["c103976.graph_c0",1,0.1,2,0.19,3,0.31,19,1.54,18,1.04,28,3.56,0.000116515,2.640085088,"up","--","--","Cellular Component: Golgi apparatus (GO:0005794);; Biological Process: protein glycosylation (GO:0006486);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: carbohydrate binding (GO:0030246);; Molecular Function: galactosylxylosylprotein 3-beta-galactosyltransferase activity (GO:0047220);; ","K20843|2.0e-18|oeu:111405267|K20843 hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-] | (RefSeq) hydroxyproline O-galactosyltransferase GALT5-like","[G]","Carbohydrate transport and metabolism ","--","Hydroxyproline O-galactosyltransferase GALT6 OS=Arabidopsis thaliana OX=3702 GN=GALT6 PE=2 SV=2","Galactosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24821 PE=3 SV=1","G","Carbohydrate transport and metabolism","hydroxyproline O-galactosyltransferase GALT5-like, partial [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c81541.graph_c0",1230,84.29,1294,84.14,1204,85.5,347,24.46,294,23.47,305,21.55,1.06e-142,-2.295287742,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09286|2.1e-68|oeu:111385757|K09286 EREBP-like factor | (RefSeq) ethylene-responsive transcription factor ERF008-like","--","--","AP2 domain","Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1","AP2/ERF domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_036294 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor ERF008-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c101496.graph_c1",4447,268.48,4871,260.17,4369,244.78,2721,127.43,2138,114.57,2474,123.68,2.92e-82,-1.222621549,"down","[E]","Amino acid transport and metabolism ","Molecular Function: catalytic activity (GO:0003824);; ","K05396|1.3e-80|oeu:111401740|K05396 D-cysteine desulfhydrase [EC:4.4.1.15] | (RefSeq) putative D-cysteine desulfhydrase 1, mitochondrial isoform X1","--","--","--","Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DCD PE=1 SV=1","PALP domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_014868 PE=3 SV=1","E","Amino acid transport and metabolism","putative D-cysteine desulfhydrase 1, mitochondrial isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Cysteine and methionine metabolism (ko00270)"]
["c92142.graph_c1",0,0,0,0,0,0,24,1.06,51,2.69,45,2.07,3.25e-10,5.190033818,"up","--","--","--","K17545|3.9e-36|zma:103634684|K17545 serine/threonine-protein kinase ULK4 [EC:2.7.11.1] | (RefSeq) uncharacterized protein LOC103634684","[R]","General function prediction only ","gag-polypeptide of LTR copia-type;; GAG-pre-integrase domain;; Retrotransposon gag protein","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003500 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein F0562_003500 [Nyssa sinensis]","--","--"]
["c83440.graph_c0",100,13.68,105,13.5,113,15.83,633,88.73,673,108.17,714,99.34,4.22e-67,2.333237475,"up","--","--","Biological Process: defense response (GO:0006952);; ","--","--","--","Pathogenesis-related protein Bet v 1 family","Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1","MLP-like protein 34-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_44565 PE=4 SV=1","S","Function unknown","kirola-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","--"]
["c83491.graph_c0",29,3.65,25,2.96,19,2.45,137,17.66,162,24.01,200,25.6,2.32e-19,2.401822596,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: channel activity (GO:0015267);; Cellular Component: integral component of membrane (GO:0016021);; ","K09873|2.0e-81|oeu:111366546|K09873 aquaporin TIP | (RefSeq) aquaporin TIP2-1-like","[G]","Carbohydrate transport and metabolism ","Major intrinsic protein","Aquaporin TIP2-1 OS=Arabidopsis thaliana OX=3702 GN=TIP2-1 PE=1 SV=2","Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1","G","Carbohydrate transport and metabolism","aquaporin TIP2-1-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c115795.graph_c0",511,7.62,425,5.91,326,4.98,998,15.12,1072,18.63,1243,18.67,3.72e-19,1.068560215,"up","--","--","Molecular Function: inorganic anion exchanger activity (GO:0005452);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: borate transport (GO:0046713);; Molecular Function: borate efflux transmembrane transporter activity (GO:0080139);; ","K24194|1.1e-300|oeu:111368109|K24194 boron transporter | (RefSeq) boron transporter 1-like","[P]","Inorganic ion transport and metabolism ","HCO3- transporter family","Boron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=BOR1 PE=1 SV=1","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_17s0000g08530 PE=3 SV=1","P","Inorganic ion transport and metabolism","boron transporter 1-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c73395.graph_c0",256,37.72,120,16.6,113,17.04,92,13.89,44,7.62,56,8.39,0.001139025,-1.571020549,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Rapid ALkalinization Factor (RALF)","Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1","Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A08G053600v1 PE=3 SV=1","--","--","protein RALF-like 33 [Phalaenopsis equestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c105846.graph_c0",54,2.58,43,2.05,34,1.8,273,16.35,274,19.28,296,18.3,2.26e-31,2.339594573,"up","--","--","Molecular Function: protein methyltransferase activity (GO:0008276);; Cellular Component: integral component of membrane (GO:0016021);; ","K00599|2.8e-11|spen:107029012|K00599 methyltransferase-like protein 6 [EC:2.1.1.-] | (RefSeq) methyltransferase-like protein 6 isoform X1","--","--","Lysine methyltransferase;; Methyltransferase small domain;; Conserved hypothetical protein 95","--","protein-lysine N-methyltransferase efm3 isoform X3 OS=Capsicum annuum OX=4072 GN=LOC107843075 PE=4 SV=1","S","Function unknown","protein N-lysine methyltransferase METTL21A isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109928.graph_c0",10,0.34,7,0.22,4,0.14,27,0.94,29,1.14,38,1.3,0.001012723,1.703989342,"up","--","--","--","--","--","--","NPH3 family","BTB/POZ domain-containing protein At5g17580 OS=Arabidopsis thaliana OX=3702 GN=At5g17580 PE=2 SV=1","Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_02428 PE=3 SV=1","S","Function unknown","BTB/POZ domain-containing protein At5g17580-like [Olea europaea var. sylvestris]","--","--"]
["c95984.graph_c0",130,5.4,133,5.21,88,3.76,630,26.73,543,26.38,639,26.95,1.85e-49,2.036646754,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: gamma-glutamylcyclotransferase activity (GO:0003839);; Biological Process: glutathione catabolic process (GO:0006751);; ","K22596|3.6e-90|oeu:111385982|K22596 gamma-glutamylcyclotransferase, plant [EC:4.3.2.9] | (RefSeq) gamma-glutamylcyclotransferase 2-1-like","[P]","Inorganic ion transport and metabolism ","ChaC-like protein","Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;1 PE=1 SV=1","Gamma-glutamylcyclotransferase OS=Arachis hypogaea OX=3818 GN=Ahy_A10g048014 PE=3 SV=1","P","Inorganic ion transport and metabolism","gamma-glutamylcyclotransferase 2-1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Glutathione metabolism (ko00480)"]
["c108756.graph_c0",12,0.93,21,1.34,27,1.91,56,3.9,47,3.8,54,3.93,0.008284125,1.018145599,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","--","--","--","--","--","CCHC-type domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_024518 PE=4 SV=1","L","Replication, recombination and repair","Uncharacterized protein TCM_024518 [Theobroma cacao]","molecular function: binding (GO:0005488)","--"]
["c106898.graph_c2",12,0.46,13,0.54,7,0.44,115,4.99,105,5.84,121,5.72,1.97e-18,2.990930333,"up","--","--","--","--","--","--","Domain of unknown function (DUF966)","Photosystem II D2 protein OS=Mesostigma viride OX=41882 GN=psbD PE=3 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17819 PE=4 SV=1","S","Function unknown","protein UPSTREAM OF FLC-like [Olea europaea var. sylvestris]","--","--"]
["c93329.graph_c0",40,3.71,27,2.33,20,1.88,1,0.09,0,0,1,0.09,4.63e-10,-4.533779829,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102298.graph_c0",3707,135.94,4015,137.93,3491,130.89,2256,83.38,2076,88.35,2314,85.36,1.57e-89,-1.075223189,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K22985|1.0e-231|oeu:111404109|K22985 G protein-coupled receptor 107 | (RefSeq) protein GPR107-like","[T]","Signal transduction mechanisms ","Lung seven transmembrane receptor","Protein CANDIDATE G-PROTEIN COUPLED RECEPTOR 7 OS=Arabidopsis thaliana OX=3702 GN=CAND7 PE=2 SV=1","G protein-coupled seven transmembrane receptor OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23595 PE=4 SV=1","T","Signal transduction mechanisms","protein GPR107-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c113985.graph_c1",80,2.79,114,3.78,94,3.42,3,0.11,5,0.21,13,0.46,1.4e-23,-3.921521929,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K00079|6.7e-08|peq:110037942|K00079 carbonyl reductase 1 [EC:1.1.1.184 1.1.1.189 1.1.1.197] | (RefSeq) carbonyl reductase [NADPH] 1-like","--","--","--","--","Uncharacterized protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02080200 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC110800871 [Spinacia oleracea]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Arachidonic acid metabolism (ko00590);; Folate biosynthesis (ko00790)"]
["c115750.graph_c0",930,24.64,983,24.84,853,22.74,3382,90,2916,89.1,3317,89.06,2.21e-117,1.473439739,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: methylation (GO:0032259);; ","K23870|0.0e+00|oeu:111408847|K23870 putative pectin methyltransferase [EC:2.1.1.-] | (RefSeq) probable pectin methyltransferase QUA2","--","--","Putative S-adenosyl-L-methionine-dependent methyltransferase;; Methyltransferase domain","Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana OX=3702 GN=QUA2 PE=1 SV=2","Methyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10475 PE=3 SV=1","S","Function unknown","probable pectin methyltransferase QUA2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106905.graph_c0",1744,67.26,1839,66.33,1627,65.46,431,14.51,344,13.56,387,13.94,6.93e-204,-2.482616235,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; ","K04688|8.7e-234|oeu:111403936|K04688 ribosomal protein S6 kinase beta [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase AtPK2/AtPK19-like","[RT]","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Fungal protein kinase;; Kinase-like","Serine/threonine-protein kinase AtPK2/AtPK19 OS=Arabidopsis thaliana OX=3702 GN=ATPK2 PE=1 SV=2","Ribosomal protein S6 kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24245 PE=3 SV=1","T","Signal transduction mechanisms","serine/threonine-protein kinase AtPK2/AtPK19-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c105880.graph_c0",37,3.68,26,2.44,13,1.33,86,8.76,89,10.4,114,11.54,1.21e-06,1.562403225,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","K16222|7.9e-32|dct:110107877|K16222 Dof zinc finger protein DOF5.5 | (RefSeq) cyclic dof factor 1 isoform X1","--","--","Dof domain, zinc finger","Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2","Dof-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22626 PE=4 SV=1","K","Transcription","hypothetical protein CDL12_22626 [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007)","Circadian rhythm - plant (ko04712)"]
["c100719.graph_c0",0,0,0,0,0,0,21,1.38,26,1.96,22,1.56,2.01e-07,4.50646325,"up","--","--","--","K21994|8.9e-29|cam:101500615|K21994 LOB domain-containing protein 18 | (RefSeq) LOB domain-containing protein 18","--","--","Lateral organ boundaries (LOB) domain","LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2","LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g02380 PE=3 SV=1","S","Function unknown","LOB domain-containing protein 15 [Olea europaea var. sylvestris]","--","--"]
["c75305.graph_c0",38,1.75,35,1.53,29,1.38,9,0.42,9,0.49,5,0.23,1.05e-06,-2.305872396,"down","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K13080|5.9e-113|vvi:100244875|K13080 flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236] | (RefSeq) flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glucosyltransferase 29 OS=Panax ginseng OX=4054 GN=UGT29 PE=1 SV=1","Glycosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05371 PE=3 SV=1","--","--","beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Flavonoid biosynthesis (ko00941);; Flavone and flavonol biosynthesis (ko00944)"]
["c91218.graph_c1",181,10.91,227,13.25,225,14.11,81,5.07,38,2.72,55,3.46,7.16e-23,-2.164023882,"down","--","--","Cellular Component: plasma membrane (GO:0005886);; Molecular Function: ligand-gated ion channel activity (GO:0015276);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: signaling receptor activity (GO:0038023);; ","K05387|2.8e-38|fve:101308735|K05387 glutamate receptor, ionotropic, plant | (RefSeq) glutamate receptor 2.7-like","[PET]","--","Receptor family ligand binding region;; Ligand-gated ion channel","Glutamate receptor 2.9 OS=Arabidopsis thaliana OX=3702 GN=GLR2.9 PE=2 SV=1","Glutamate receptor OS=Nicotiana tabacum OX=4097 GN=LOC107790599 PE=3 SV=1","--","--","glutamate receptor 2.7-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; molecular function: molecular transducer activity (GO:0060089);; biological process: localization (GO:0051179);; cellular component: membrane part (GO:0044425);; molecular function: signal transducer activity (GO:0004871);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c86892.graph_c0",48,3.2,62,3.9,47,3.22,33,2.25,21,1.64,33,2.24,0.000606198,-1.143984752,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K19041|2.0e-17|mtr:MTR_5g009200|K19041 E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27] | (RefSeq) RING-H2 finger ATL21A-like protein","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; RING-H2 zinc finger domain;; RING-like zinc finger;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger)","RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1","RING-type domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014108mg PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","RING-H2 finger protein ATL67-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c86074.graph_c0",7,0.33,15,0.66,20,0.96,70,3.34,107,5.89,99,4.7,3.37e-10,2.306286191,"up","--","--","Cellular Component: nucleosome (GO:0000786);; Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Molecular Function: protein heterodimerization activity (GO:0046982);; ","K11253|3.4e-68|vra:106759181|K11253 histone H3 | (RefSeq) histone H3-like centromeric protein CSE4","[B]","Chromatin structure and dynamics ","Core histone H2A/H2B/H3/H4","Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2","Histone domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A13G159200v1 PE=3 SV=1","B","Chromatin structure and dynamics","hypothetical protein ES288_A13G159200v1 [Gossypium darwinii]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","--"]
["c102564.graph_c0",76,5.13,85,6.44,78,5.42,250,17.09,274,18.59,264,18.01,7.18e-15,1.390981705,"up","--","--","--","--","--","--","Ribosomal protein L31","--","Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_011441 PE=4 SV=1","--","--","uncharacterized protein LOC111376501 [Olea europaea var. sylvestris]","--","--"]
["c107439.graph_c2",171,6.58,179,6.57,180,7.11,71,2.99,80,3.65,77,3.21,2.03e-15,-1.52268087,"down","--","--","Biological Process: lipid metabolic process (GO:0006629);; Molecular Function: O-acyltransferase activity (GO:0008374);; Molecular Function: phospholipid:diacylglycerol acyltransferase activity (GO:0046027);; ","--","[I]","Lipid transport and metabolism ","--","Phospholipid--sterol O-acyltransferase OS=Arabidopsis thaliana OX=3702 GN=PSAT PE=2 SV=2","Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03855 PE=4 SV=1","I","Lipid transport and metabolism","phospholipid--sterol O-acyltransferase, partial [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","--"]
["c90547.graph_c0",58,4.57,58,4.31,45,3.65,165,13.39,158,14.6,188,15.09,5.38e-10,1.327680201,"up","--","--","--","K12338|2.2e-52|bna:106397231|K12338 anthocyanidin 3-O-glucoside 5-O-glucosyltransferase [EC:2.4.1.298] | (RefSeq) UDP-glycosyltransferase 75C1-like","[GC]","--","--","Crocetin glucosyltransferase, chloroplastic OS=Gardenia jasminoides OX=114476 GN=UGT75L6 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000033 PE=4 SV=1","--","--","crocetin glucosyltransferase, chloroplastic-like [Olea europaea var. sylvestris]","--","Anthocyanin biosynthesis (ko00942)"]
["c109085.graph_c0",2287,101.44,2357,100.34,2238,99.24,1235,46.72,1035,47.04,1223,49.09,8.14e-92,-1.30173479,"down","[H]","Coenzyme transport and metabolism ","Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity (GO:0004514);; Biological Process: NAD biosynthetic process (GO:0009435);; Cellular Component: chloroplast (GO:0009507);; ","K00767|8.5e-191|oeu:111380244|K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] | (RefSeq) nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic isoform X1","[F]","Nucleotide transport and metabolism ","Quinolinate phosphoribosyl transferase, C-terminal domain;; Quinolinate phosphoribosyl transferase, N-terminal domain","Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=QPT PE=2 SV=2","Quinolinate phosphoribosyltransferase [decarboxylating] OS=Coffea canephora OX=49390 GN=GSCOC_T00032828001 PE=3 SV=1","F","Nucleotide transport and metabolism","nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c101802.graph_c0",20,1.41,9,0.58,17,1.23,53,3.96,69,6,58,4.44,4.95e-05,1.580924867,"up","--","--","--","--","--","--","--","Kinetochore protein SPC24 homolog OS=Arabidopsis thaliana OX=3702 GN=SPC24 PE=1 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015209 PE=4 SV=1","--","--","uncharacterized protein LOC105173602 [Sesamum indicum]","--","--"]
["c104607.graph_c0",281,11.64,247,9.41,249,10.3,79,3.31,85,3.9,68,2.76,2.79e-30,-2.043789907,"down","[P]","Inorganic ion transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: metal ion transmembrane transporter activity (GO:0046873);; ","K21398|1.3e-238|sind:105165138|K21398 natural resistance-associated macrophage protein 2 | (RefSeq) metal transporter Nramp6 isoform X1","[P]","Inorganic ion transport and metabolism ","Natural resistance-associated macrophage protein","Metal transporter Nramp6 OS=Arabidopsis thaliana OX=3702 GN=NRAMP6 PE=2 SV=2","Putative metal transporter Nramp6-like OS=Davidia involucrata OX=16924 GN=Din_031600 PE=3 SV=1","P","Inorganic ion transport and metabolism","metal transporter Nramp6 isoform X1 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c105182.graph_c1",0,0,0,0,0,0,38,2.44,56,4.12,65,4.16,4e-12,5.563646244,"up","--","--","Cellular Component: plasma membrane (GO:0005886);; Cellular Component: cell plate (GO:0009504);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: phragmoplast (GO:0009524);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: vesicle-mediated transport (GO:0016192);; ","K08486|3.2e-159|oeu:111393679|K08486 syntaxin 1B/2/3 | (RefSeq) syntaxin-related protein KNOLLE-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Syntaxin;; SNARE domain","Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana OX=3702 GN=KN PE=1 SV=1","t-SNARE coiled-coil homology domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00026227001 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","syntaxin-related protein KNOLLE-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","SNARE interactions in vesicular transport (ko04130)"]
["c102408.graph_c0",135,12.02,130,10.99,143,13.17,64,5.87,61,6.42,58,5.29,1.49e-11,-1.460841931,"down","--","--","Molecular Function: transferase activity (GO:0016740);; Cellular Component: NatC complex (GO:0031417);; ","--","--","--","LSM domain","--","N-alpha-acetyltransferase 38, NatC auxiliary subunit like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20773 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111412241 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","--"]
["c103959.graph_c0",11,1.59,11,1.49,7,1.03,45,6.65,23,3.9,30,4.4,0.006760033,1.339865622,"up","--","--","--","K12471|1.7e-13|oeu:111393598|K12471 epsin | (RefSeq) clathrin interactor EPSIN 2-like isoform X1","--","--","--","--","clathrin interactor EPSIN 2-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107793819 PE=4 SV=1","--","--","clathrin interactor EPSIN 2-like isoform X2 [Olea europaea var. sylvestris]","--","Endocytosis (ko04144)"]
["c107008.graph_c0",8,0.24,8,0.29,16,0.54,101,3.85,131,5.93,155,5.79,1.66e-19,3.153361045,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20359|1.4e-34|eus:EUTSA_v10006389mg|K20359 PRA1 family protein 1 | (RefSeq) hypothetical protein","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat","Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00922 PE=4 SV=1","T","Signal transduction mechanisms","probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c96510.graph_c1",388,8.63,401,8.44,352,8.07,243,5.52,187,4.87,214,4.84,9.56e-19,-1.142864852,"down","[E]","Amino acid transport and metabolism ","Molecular Function: glutamate-ammonia ligase activity (GO:0004356);; Biological Process: glutamine biosynthetic process (GO:0006542);; Biological Process: polyamine catabolic process (GO:0006598);; Molecular Function: transcription factor binding (GO:0008134);; Molecular Function: hydrolase activity (GO:0016787);; ","K01915|2.5e-176|cpep:111803297|K01915 glutamine synthetase [EC:6.3.1.2] | (RefSeq) type-1 glutamine synthetase 1-like","[E]","Amino acid transport and metabolism ","Glutamine synthetase, catalytic domain;; Amidohydrolase","--","Gln-synt_C domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a001401mg PE=3 SV=1","E","Amino acid transport and metabolism","protein fluG isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Arginine biosynthesis (ko00220);; Alanine, aspartate and glutamate metabolism (ko00250);; Glyoxylate and dicarboxylate metabolism (ko00630);; Nitrogen metabolism (ko00910);; Biosynthesis of amino acids (ko01230)"]
["c116462.graph_c3",43,2.31,42,2.05,30,1.68,19,1.34,7,0.52,17,1.06,8.88e-05,-1.664953783,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Cellular Component: chromosome (GO:0005694);; Biological Process: DNA replication (GO:0006260);; Biological Process: DNA repair (GO:0006281);; ","K09272|4.2e-07|dzi:111291985|K09272 structure-specific recognition protein 1 | (RefSeq) FACT complex subunit SSRP1-like isoform X1","--","--","--","FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1","FACT complex subunit SSRP1 OS=Gossypium australe OX=47621 GN=EPI10_025628 PE=3 SV=1","--","--","FACT complex subunit SSRP1-like [Gossypium australe]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896)","--"]
["c113219.graph_c2",177,8.11,178,7.82,170,7.96,560,28.14,461,28.19,554,27.78,6.42e-24,1.254437636,"up","--","--","Biological Process: carbohydrate transport (GO:0008643);; Cellular Component: integral component of membrane (GO:0016021);; ","K15356|3.4e-204|oeu:111411658|K15356 GDP-mannose transporter | (RefSeq) GDP-mannose transporter GONST1-like isoform X1","[GOU]","--","Triose-phosphate Transporter family","GDP-mannose transporter GONST1 OS=Arabidopsis thaliana OX=3702 GN=GONST1 PE=1 SV=2","Nucleotide-sugar transporter VRG4/SQV-7 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01117 PE=4 SV=1","--","--","GDP-mannose transporter GONST1-like isoform X1 [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c116570.graph_c0",151,6.75,138,4.67,124,5.6,486,16.71,588,22.92,697,24.27,1.21e-33,1.767113791,"up","--","--","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|7.8e-137|vvi:100260741|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase CLAVATA1","--","--","Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain","Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1","Protein kinase domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00040119001 PE=3 SV=1","T","Signal transduction mechanisms","leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97237.graph_c0",0,0,0,0,0,0,39,1.56,51,2.34,59,2.36,9.55e-12,5.488865239,"up","[R]","General function prediction only ","Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: chloroplast (GO:0009507);; Cellular Component: plastid (GO:0009536);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; ","K14152|3.3e-75|cpep:111783531|K14152 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase [EC:3.6.1.31 3.5.4.19 1.1.1.23] | (RefSeq) uncharacterized protein LOC111783531","--","--","Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat;; Tetratricopeptide repeat","Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=At3g51280 PE=2 SV=1","TPR_REGION domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00037048001 PE=4 SV=1","S","Function unknown","protein POLLENLESS 3-LIKE 2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","Histidine metabolism (ko00340);; Biosynthesis of amino acids (ko01230)"]
["c91033.graph_c0",455,16.66,491,16.99,503,18.93,152,5.62,141,6.03,128,4.7,1.73e-53,-2.093752723,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","[R]","General function prediction only ","Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeats (many copies);; Domain of unknown function;; Ankyrin repeat","Ankyrin repeat-containing protein BDA1 OS=Arabidopsis thaliana OX=3702 GN=BAD1 PE=1 SV=1","ANK_REP_REGION domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_02249 PE=4 SV=1","S","Function unknown","ankyrin repeat-containing protein BDA1-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97596.graph_c0",7,0.28,2,0.11,0,0,31,1.22,32,2.02,28,1.15,1.63e-05,2.673344295,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: response to acid chemical (GO:0001101);; Biological Process: cellular glucose homeostasis (GO:0001678);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: hexokinase activity (GO:0004396);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: glucose binding (GO:0005536);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: cytosol (GO:0005829);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: organic acid metabolic process (GO:0006082);; Biological Process: pyruvate metabolic process (GO:0006090);; Biological Process: generation of precursor metabolites and energy (GO:0006091);; Biological Process: glycolytic process (GO:0006096);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: purine nucleotide metabolic process (GO:0006163);; Biological Process: purine nucleotide biosynthetic process (GO:0006164);; Biological Process: nucleoside diphosphate phosphorylation (GO:0006165);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: obsolete coenzyme metabolic process (GO:0006732);; Biological Process: obsolete oxidoreduction coenzyme metabolic process (GO:0006733);; Biological Process: nucleoside phosphate metabolic process (GO:0006753);; Biological Process: ATP biosynthetic process (GO:0006754);; Biological Process: ATP generation from ADP (GO:0006757);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: response to osmotic stress (GO:0006970);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: response to oxidative stress (GO:0006979);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: obsolete coenzyme biosynthetic process (GO:0009108);; Biological Process: nucleotide metabolic process (GO:0009117);; Biological Process: nucleoside monophosphate metabolic process (GO:0009123);; Biological Process: nucleoside monophosphate biosynthetic process (GO:0009124);; Biological Process: purine nucleoside monophosphate metabolic process (GO:0009126);; Biological Process: purine nucleoside monophosphate biosynthetic process (GO:0009127);; Biological Process: nucleoside diphosphate metabolic process (GO:0009132);; Biological Process: purine nucleoside diphosphate metabolic process (GO:0009135);; Biological Process: nucleoside triphosphate metabolic process (GO:0009141);; Biological Process: nucleoside triphosphate biosynthetic process (GO:0009142);; Biological Process: purine nucleoside triphosphate metabolic process (GO:0009144);; Biological Process: purine nucleoside triphosphate biosynthetic process (GO:0009145);; Biological Process: purine ribonucleotide metabolic process (GO:0009150);; Biological Process: purine ribonucleotide biosynthetic process (GO:0009152);; Biological Process: ribonucleoside monophosphate biosynthetic process (GO:0009156);; Biological Process: ribonucleoside monophosphate metabolic process (GO:0009161);; Biological Process: nucleotide biosynthetic process (GO:0009165);; Biological Process: nucleotide catabolic process (GO:0009166);; Biological Process: purine ribonucleoside monophosphate metabolic process (GO:0009167);; Biological Process: purine ribonucleoside monophosphate biosynthetic process (GO:0009168);; Biological Process: purine ribonucleoside diphosphate metabolic process (GO:0009179);; Biological Process: ribonucleoside diphosphate metabolic process (GO:0009185);; Biological Process: ribonucleoside triphosphate metabolic process (GO:0009199);; Biological Process: ribonucleoside triphosphate biosynthetic process (GO:0009201);; Biological Process: purine ribonucleoside triphosphate metabolic process (GO:0009205);; Biological Process: purine ribonucleoside triphosphate biosynthetic process (GO:0009206);; Biological Process: ribonucleotide metabolic process (GO:0009259);; Biological Process: ribonucleotide biosynthetic process (GO:0009260);; Biological Process: response to temperature stimulus (GO:0009266);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to heat (GO:0009408);; Biological Process: response to cold (GO:0009409);; Biological Process: response to UV (GO:0009411);; Biological Process: response to water deprivation (GO:0009414);; Biological Process: response to water (GO:0009415);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to salt stress (GO:0009651);; Biological Process: cellular process (GO:0009987);; Biological Process: response to inorganic substance (GO:0010035);; Biological Process: response to UV-B (GO:0010224);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: carbohydrate catabolic process (GO:0016052);; Biological Process: organic acid biosynthetic process (GO:0016053);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Biological Process: drug metabolic process (GO:0017144);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Molecular Function: mannokinase activity (GO:0019158);; Molecular Function: carbohydrate kinase activity (GO:0019200);; Biological Process: nicotinamide nucleotide biosynthetic process (GO:0019359);; Biological Process: pyridine nucleotide metabolic process (GO:0019362);; Biological Process: pyridine nucleotide biosynthetic process (GO:0019363);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: aromatic compound catabolic process (GO:0019439);; Biological Process: organophosphate metabolic process (GO:0019637);; Biological Process: ribose phosphate metabolic process (GO:0019693);; Biological Process: cellular homeostasis (GO:0019725);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: monocarboxylic acid metabolic process (GO:0032787);; Biological Process: carbohydrate homeostasis (GO:0033500);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: nucleobase-containing small molecule biosynthetic process (GO:0034404);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: nucleobase-containing compound catabolic process (GO:0034655);; Biological Process: response to chemical (GO:0042221);; Biological Process: homeostatic process (GO:0042592);; Biological Process: glucose homeostasis (GO:0042593);; Biological Process: pyruvate biosynthetic process (GO:0042866);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: oxoacid metabolic process (GO:0043436);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: cellular nitrogen compound catabolic process (GO:0044270);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Biological Process: small molecule metabolic process (GO:0044281);; Biological Process: small molecule biosynthetic process (GO:0044283);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: ADP metabolic process (GO:0046031);; Biological Process: ATP metabolic process (GO:0046034);; Biological Process: ribose phosphate biosynthetic process (GO:0046390);; Biological Process: carboxylic acid biosynthetic process (GO:0046394);; Biological Process: organophosphate catabolic process (GO:0046434);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: nicotinamide nucleotide metabolic process (GO:0046496);; Biological Process: heterocycle catabolic process (GO:0046700);; Biological Process: carbohydrate phosphorylation (GO:0046835);; Biological Process: nucleotide phosphorylation (GO:0046939);; Biological Process: chemical homeostasis (GO:0048878);; Biological Process: response to stimulus (GO:0050896);; Biological Process: obsolete cofactor metabolic process (GO:0051186);; Biological Process: obsolete cofactor biosynthetic process (GO:0051188);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: cellular chemical homeostasis (GO:0055082);; Biological Process: nucleobase-containing small molecule metabolic process (GO:0055086);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: monocarboxylic acid biosynthetic process (GO:0072330);; Biological Process: purine-containing compound metabolic process (GO:0072521);; Biological Process: purine-containing compound biosynthetic process (GO:0072522);; Biological Process: pyridine-containing compound metabolic process (GO:0072524);; Biological Process: pyridine-containing compound biosynthetic process (GO:0072525);; Biological Process: organophosphate biosynthetic process (GO:0090407);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: carbohydrate derivative biosynthetic process (GO:1901137);; Biological Process: nucleoside phosphate catabolic process (GO:1901292);; Biological Process: nucleoside phosphate biosynthetic process (GO:1901293);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound catabolic process (GO:1901361);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound biosynthetic process (GO:1901566);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: response to oxygen-containing compound (GO:1901700);; ","K00844|5.2e-185|oeu:111391695|K00844 hexokinase [EC:2.7.1.1] | (RefSeq) probable hexokinase-like 2 protein","[G]","Carbohydrate transport and metabolism ","Hexokinase;; Hexokinase;; Hexokinase","Probable hexokinase-like 2 protein OS=Arabidopsis thaliana OX=3702 GN=At4g37840 PE=3 SV=1","Phosphotransferase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_036609 PE=3 SV=1","G","Carbohydrate transport and metabolism","probable hexokinase-like 2 protein [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Galactose metabolism (ko00052);; Starch and sucrose metabolism (ko00500);; Amino sugar and nucleotide sugar metabolism (ko00520);; Carbon metabolism (ko01200)"]
["c81809.graph_c0",68,3.99,47,2.52,45,2.69,8,0.49,3,0.21,11,0.68,6.01e-12,-3.020334428,"down","--","--","--","--","--","--","--","--","--","--","--","uncharacterized protein LOC111397737 [Olea europaea var. sylvestris]","--","--"]
["c116460.graph_c0",24634,730.85,22350,627.8,20574,629.18,12254,372.55,9776,340.63,11054,335.49,2.26e-96,-1.351684078,"down","[QV]","--","Molecular Function: monooxygenase activity (GO:0004497);; Molecular Function: iron ion binding (GO:0005506);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20667|1.3e-254|oeu:111407310|K20667 beta-amyrin 28-monooxygenase [EC:1.14.14.126] | (RefSeq) beta-amyrin 28-oxidase-like","[QI]","--","Cytochrome P450","Beta-amyrin 28-monooxygenase OS=Vitis vinifera OX=29760 GN=CYP716A15 PE=1 SV=1","Cytochrome P450 716C53 OS=Avicennia marina OX=82927 GN=CYP716C53 PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","beta-amyrin 28-oxidase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c116599.graph_c0",368,23.31,360,19.55,391,22.42,1079,58.52,915,66.57,1058,55.23,4.12e-31,1.118538169,"up","--","--","--","--","--","--","--","Protein NARROW LEAF 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAL1 PE=1 SV=1","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_14268 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111370721 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c115129.graph_c0",262,9.26,228,7.82,245,8.99,666,25.8,606,25.76,724,27.88,5.11e-23,1.111221409,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","--","[T]","Signal transduction mechanisms ","Nuclear transport factor 2 (NTF2) domain;; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)","Nuclear transport factor 2 OS=Arabidopsis thaliana OX=3702 GN=NTF2 PE=1 SV=1","RasGAP SH3 binding protein rasputin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27299 PE=4 SV=1","A","RNA processing and modification","putative G3BP-like protein isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c88540.graph_c0",11,1.09,11,1.04,3,0.32,25,2.62,36,4.28,43,4.4,0.001480303,1.620547719,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98081.graph_c0",12552,363,10674,298.74,9438,289.14,3825,127.28,3470,133.03,3904,127.48,3.96e-150,-1.86322174,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: beta-galactosidase activity (GO:0004565);; Biological Process: carbohydrate metabolic process (GO:0005975);; ","K12309|8.6e-251|csat:104711840|K12309 beta-galactosidase [EC:3.2.1.23] | (RefSeq) LOW QUALITY PROTEIN: beta-galactosidase 2","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolases family 35;; Beta-sandwich domain in beta galactosidase;; Glycosyl hydrolases family 35","Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1","Beta-galactosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10066 PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-galactosidase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Galactose metabolism (ko00052);; Other glycan degradation (ko00511);; Glycosaminoglycan degradation (ko00531);; Sphingolipid metabolism (ko00600);; Glycosphingolipid biosynthesis - ganglio series (ko00604)"]
["c83046.graph_c0",3,0.28,3,0.26,1,0.09,29,2.74,37,4,33,3.1,4.73e-07,3.094551669,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|1.4e-87|han:110900042|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 3.1-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1","Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_034969 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 3.1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c111168.graph_c0",2495,55.71,2678,56.97,2341,53.69,489,11.07,421,11.55,520,12.4,0,-2.713509849,"down","--","--","Biological Process: cell cycle checkpoint (GO:0000075);; Biological Process: DNA damage checkpoint (GO:0000077);; Cellular Component: ubiquitin ligase complex (GO:0000151);; Biological Process: protein polyubiquitination (GO:0000209);; Biological Process: DNA synthesis involved in DNA repair (GO:0000731);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: centrosome (GO:0005813);; Cellular Component: microtubule organizing center (GO:0005815);; Cellular Component: cytoskeleton (GO:0005856);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: DNA metabolic process (GO:0006259);; Biological Process: DNA repair (GO:0006281);; Biological Process: postreplication repair (GO:0006301);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: proteolysis (GO:0006508);; Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511);; Biological Process: protein monoubiquitination (GO:0006513);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: response to stress (GO:0006950);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: catabolic process (GO:0009056);; Biological Process: macromolecule catabolic process (GO:0009057);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: macromolecule biosynthetic process (GO:0009059);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to UV (GO:0009411);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of cell cycle process (GO:0010564);; Biological Process: negative regulation of cell cycle process (GO:0010948);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Biological Process: protein ubiquitination (GO:0016567);; Biological Process: heterocycle biosynthetic process (GO:0018130);; Biological Process: aromatic compound biosynthetic process (GO:0019438);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: modification-dependent protein catabolic process (GO:0019941);; Biological Process: translesion synthesis (GO:0019985);; Biological Process: signaling (GO:0023052);; Biological Process: protein catabolic process (GO:0030163);; Cellular Component: cullin-RING ubiquitin ligase complex (GO:0031461);; Cellular Component: Cul4A-RING E3 ubiquitin ligase complex (GO:0031464);; Cellular Component: Cul4B-RING E3 ubiquitin ligase complex (GO:0031465);; Biological Process: DNA integrity checkpoint (GO:0031570);; Biological Process: G2 DNA damage checkpoint (GO:0031572);; Biological Process: protein modification by small protein conjugation (GO:0032446);; Cellular Component: protein-containing complex (GO:0032991);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: cellular macromolecule biosynthetic process (GO:0034645);; Biological Process: nucleobase-containing compound biosynthetic process (GO:0034654);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: protein modification process (GO:0036211);; Biological Process: signal transduction in response to DNA damage (GO:0042770);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: modification-dependent macromolecule catabolic process (GO:0043632);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular protein catabolic process (GO:0044257);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular macromolecule catabolic process (GO:0044265);; Biological Process: cellular protein metabolic process (GO:0044267);; Biological Process: cellular nitrogen compound biosynthetic process (GO:0044271);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoskeletal part (GO:0044430);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of cell cycle (GO:0045786);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: proteolysis involved in cellular protein catabolic process (GO:0051603);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of cell cycle (GO:0051726);; Biological Process: biological regulation (GO:0065007);; Biological Process: protein modification by small protein conjugation or removal (GO:0070647);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: DNA biosynthetic process (GO:0071897);; Biological Process: signal transduction involved in cell cycle checkpoint (GO:0072395);; Biological Process: signal transduction involved in DNA integrity checkpoint (GO:0072401);; Biological Process: signal transduction involved in DNA damage checkpoint (GO:0072422);; Biological Process: signal transduction involved in G2 DNA damage checkpoint (GO:0072425);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: organic cyclic compound biosynthetic process (GO:1901362);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: organonitrogen compound catabolic process (GO:1901565);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: organic substance biosynthetic process (GO:1901576);; Biological Process: regulation of cell cycle phase transition (GO:1901987);; Biological Process: negative regulation of cell cycle phase transition (GO:1901988);; Cellular Component: catalytic complex (GO:1902494);; Biological Process: regulation of cell cycle G2/M phase transition (GO:1902749);; Biological Process: negative regulation of cell cycle G2/M phase transition (GO:1902750);; Cellular Component: transferase complex (GO:1990234);; ","K11790|6.1e-188|oeu:111367066|K11790 denticleless | (RefSeq) denticleless protein homolog A isoform X1","[S]","Function unknown ","WD domain, G-beta repeat","--","WD_REPEATS_REGION domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a005105mg PE=4 SV=1","S","Function unknown","denticleless protein homolog A isoform X2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699)","--"]
["c117823.graph_c0",34,3.25,36,3.24,20,1.96,1,0.1,2,0.22,0,0,4.64e-10,-4.29286751,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103852.graph_c0",0,0,0,0,2,0.28,41,3.28,62,5.29,48,3.85,1.54e-11,4.734483195,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c95840.graph_c4",16,1.32,19,2.21,27,3.23,363,19.66,364,19.25,386,19.65,7.78e-61,3.784944829,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: RNA binding (GO:0003723);; Biological Process: RNA processing (GO:0006396);; Molecular Function: RNA methyltransferase activity (GO:0008173);; ","K03437|1.8e-69|oeu:111367506|K03437 RNA methyltransferase, TrmH family | (RefSeq) uncharacterized protein LOC111367506","[J]","Translation, ribosomal structure and biogenesis ","SpoU rRNA Methylase family","--","SpoU_methylase domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_19654 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","uncharacterized protein LOC111367506 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: catalytic activity (GO:0003824)","--"]
["c113272.graph_c0",26,2.12,42,3.23,46,3.85,12,1,4,0.4,9,0.75,5.17e-07,-2.366794775,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12484 PE=4 SV=1","--","--","hypothetical protein CDL12_12484 [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c109624.graph_c0",36,1.5,20,1.03,10,0.61,208,8,290,12.97,268,10.29,2.66e-11,3.038917863,"up","--","--","--","--","--","--","Fantastic Four meristem regulator","Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1","Protein FAF-like, chloroplastic OS=Morella rubra OX=262757 GN=CJ030_MR1G014974 PE=3 SV=1","S","Function unknown","protein FAF-like, chloroplastic [Olea europaea var. sylvestris]","--","--"]
["c115409.graph_c0",83,3.43,91,8.19,72,7,333,15.09,391,18.38,423,19.13,8.2e-30,1.887631813,"up","--","--","Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: RNA processing (GO:0006396);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: negative regulation of metabolic process (GO:0009892);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: production of ta-siRNAs involved in RNA interference (GO:0010267);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: negative regulation of macromolecule metabolic process (GO:0010605);; Biological Process: posttranscriptional regulation of gene expression (GO:0010608);; Biological Process: negative regulation of gene expression (GO:0010629);; Biological Process: response to organic cyclic compound (GO:0014070);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: RNA interference (GO:0016246);; Biological Process: posttranscriptional gene silencing (GO:0016441);; Biological Process: gene silencing (GO:0016458);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: production of siRNA involved in RNA interference (GO:0030422);; Biological Process: gene silencing by RNA (GO:0031047);; Biological Process: dsRNA processing (GO:0031050);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: post-transcriptional gene silencing by RNA (GO:0035194);; Biological Process: regulation of gene expression, epigenetic (GO:0040029);; Biological Process: response to chemical (GO:0042221);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to dsRNA (GO:0043331);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: production of small RNA involved in gene silencing by RNA (GO:0070918);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to dsRNA (GO:0071359);; Biological Process: cellular response to organic cyclic compound (GO:0071407);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: response to nitrogen compound (GO:1901698);; Biological Process: cellular response to nitrogen compound (GO:1901699);; ","--","[L]","Replication, recombination and repair ","--","Putative nuclear RNA export factor SDE5 OS=Arabidopsis thaliana OX=3702 GN=SDE5 PE=4 SV=1","DUF1771 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_008930 PE=4 SV=1","L","Replication, recombination and repair","putative nuclear RNA export factor SDE5 isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)","--"]
["c96712.graph_c0",66,4.71,62,3.43,59,4.45,167,13.92,186,17.7,196,14.77,2.96e-09,1.219151502,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: calcium-dependent protein serine/threonine kinase activity (GO:0009931);; Biological Process: peptidyl-serine phosphorylation (GO:0018105);; Biological Process: intracellular signal transduction (GO:0035556);; Biological Process: protein autophosphorylation (GO:0046777);; ","K00924|1.9e-90|oeu:111410350|K00924 kinase [EC:2.7.1.-] | (RefSeq) CDPK-related kinase 5-like","[T]","Signal transduction mechanisms ","--","CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003006mg PE=4 SV=1","T","Signal transduction mechanisms","CDPK-related kinase 5-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","--"]
["c83361.graph_c0",278,31.03,314,33.25,310,36.41,43,4.83,22,2.83,34,3.79,3.07e-63,-3.473275625,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c85701.graph_c0",21,3.27,17,2.48,15,2.39,59,9.4,53,9.85,60,9.49,0.000252216,1.327980411,"up","--","--","Cellular Component: nucleus (GO:0005634);; ","K12160|3.4e-32|oeu:111395745|K12160 small ubiquitin-related modifier | (RefSeq) small ubiquitin-related modifier 1-like isoform X1","[O]","Posttranslational modification, protein turnover, chaperones ","Ubiquitin-2 like Rad60 SUMO-like;; Ubiquitin family","Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2","Small ubiquitin-related modifier OS=Punica granatum OX=22663 GN=CDL15_Pgr020072 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","small ubiquitin-related modifier 1-like isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","RNA transport (ko03013)"]
["c114214.graph_c1",2,0.06,9,0.6,4,0.12,93,4.13,62,3.62,95,3.72,6.17e-15,3.507883121,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: signaling receptor binding (GO:0005102);; Molecular Function: binding (GO:0005488);; Molecular Function: protein binding (GO:0005515);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endoplasmic reticulum (GO:0005783);; Biological Process: protein retention in ER lumen (GO:0006621);; Biological Process: protein localization (GO:0008104);; Biological Process: biological_process (GO:0008150);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: cellular process (GO:0009987);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: regulation of receptor biosynthetic process (GO:0010869);; Biological Process: regulation of cell death (GO:0010941);; Cellular Component: endomembrane system (GO:0012505);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: maintenance of protein location in cell (GO:0032507);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: protein localization to organelle (GO:0033365);; Biological Process: cellular protein localization (GO:0034613);; Biological Process: maintenance of protein localization in endoplasmic reticulum (GO:0035437);; Biological Process: regulation of apoptotic process (GO:0042981);; Biological Process: regulation of programmed cell death (GO:0043067);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: maintenance of protein location (GO:0045185);; Cellular Component: perinuclear region of cytoplasm (GO:0048471);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: localization (GO:0051179);; Biological Process: maintenance of location (GO:0051235);; Biological Process: cellular localization (GO:0051641);; Biological Process: maintenance of location in cell (GO:0051651);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of biological quality (GO:0065008);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: protein localization to endoplasmic reticulum (GO:0070972);; Biological Process: maintenance of protein localization in organelle (GO:0072595);; Biological Process: regulation of anoikis (GO:2000209);; ","K21437|1.3e-310|oeu:111395980|K21437 ankyrin repeat domain-containing protein 13 | (RefSeq) ankyrin repeat domain-containing protein 13C-like","[R]","General function prediction only ","GPCR-chaperone;; Ankyrin repeat","--","Ankyrin repeat protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13784 PE=4 SV=1","S","Function unknown","ankyrin repeat domain-containing protein 13C-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007)","--"]
["c87812.graph_c0",30,2.45,77,5.92,49,4.11,1,0.08,10,0.96,12,1,3.54e-09,-2.866469949,"down","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Molecular Function: 5S rRNA binding (GO:0008097);; ","K02932|1.6e-92|cvr:CHLNCDRAFT_37575|K02932 large subunit ribosomal protein L5e | (RefSeq) hypothetical protein","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal large subunit proteins 60S L5, and 50S L18;; Ribosomal L18 C-terminal region","60S ribosomal protein L5 OS=Helianthus annuus OX=4232 GN=RPL5A PE=2 SV=1","60S ribosomal protein L5 OS=Anthurium amnicola OX=1678845 GN=RPL5A PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","RecName: Full=60S ribosomal protein L5 [Helianthus annuus]","molecular function: structural molecule activity (GO:0005198);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Ribosome (ko03010)"]
["c97070.graph_c0",1553,64.29,1657,64.18,1550,66.92,863,36.99,621,31.36,736,32.84,6.84e-60,-1.422657375,"down","[DL]","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; ","K03979|4.9e-104|cre:CHLREDRAFT_126186|K03979 GTPase [EC:3.6.5.-] | (RefSeq) predicted protein","[R]","General function prediction only ","GTP1/OBG;; 50S ribosome-binding GTPase;; Domain of unknown function (DUF1967);; Ferrous iron transport protein B","GTP-binding protein OBGC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OBGL PE=2 SV=1","OBG-type G domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_034807 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","GTP-binding protein OBGC, chloroplastic isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c114527.graph_c2",21,13.82,24,14.41,37,24.1,10,6.73,3,2.34,4,2.66,1.5e-05,-2.379802852,"down","--","--","Molecular Function: 3-hydroxyacyl-CoA dehydrogenase activity (GO:0003857);; Biological Process: fatty acid metabolic process (GO:0006631);; ","K10527|4.3e-17|cic:CICLE_v10007590mg|K10527 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211] | (RefSeq) hypothetical protein","[I]","Lipid transport and metabolism ","--","Peroxisomal fatty acid beta-oxidation multifunctional protein OS=Oryza sativa subsp. japonica OX=39947 GN=MFP PE=1 SV=2","3-hydroxyacyl-CoA dehydrogenase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09905 PE=3 SV=1","I","Lipid transport and metabolism","peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","Fatty acid degradation (ko00071);; alpha-Linolenic acid metabolism (ko00592);; Fatty acid metabolism (ko01212)"]
["c107875.graph_c0",5144,216.9,5242,209.15,4859,211.12,2323,98.24,2316,112.28,2546,108.35,1.01e-156,-1.406171278,"down","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: metal ion binding (GO:0046872);; ","K14497|5.8e-176|oeu:111407408|K14497 protein phosphatase 2C [EC:3.1.3.16] | (RefSeq) protein phosphatase 2C 37-like","[T]","Signal transduction mechanisms ","Protein phosphatase 2C","Protein phosphatase 2C 37 OS=Arabidopsis thaliana OX=3702 GN=PP2CA PE=1 SV=1","Protein-serine/threonine phosphatase OS=Solanum lycopersicum OX=4081 GN=101248778 PE=3 SV=1","T","Signal transduction mechanisms","protein phosphatase 2C 37-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075)"]
["c98393.graph_c1",88,10.75,66,7.49,67,8.26,7,0.55,3,0.33,2,0.17,6.53e-20,-4.228666139,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110605.graph_c0",1266,33.22,1481,36.66,1334,35.8,3668,111.58,3333,114.44,3765,113.32,3.51e-67,1.075736431,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: glycogen (starch) synthase activity (GO:0004373);; Cellular Component: amyloplast (GO:0009501);; Cellular Component: chloroplast (GO:0009507);; Biological Process: starch biosynthetic process (GO:0019252);; ","K13679|6.4e-228|oeu:111377230|K13679 granule-bound starch synthase [EC:2.4.1.242] | (RefSeq) granule-bound starch synthase 1, chloroplastic/amyloplastic-like","--","--","Starch synthase catalytic domain;; Glycosyl transferases group 1;; Glycosyl transferases group 1;; Starch synthase catalytic domain","Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=WAXY PE=1 SV=1","Starch synthase, chloroplastic/amyloplastic OS=Striga asiatica OX=4170 GN=STAS_01361 PE=3 SV=1","H","Coenzyme transport and metabolism","granule-bound starch synthase 1, chloroplastic/amyloplastic-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Starch and sucrose metabolism (ko00500)"]
["c116003.graph_c0",71,8.4,80,9.17,66,8.33,34,5.26,45,10.37,47,6.8,0.000129062,-1.079976184,"down","--","--","Molecular Function: ubiquitin-protein transferase activity (GO:0004842);; ","--","--","--","--","U-box domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=PUB30 PE=1 SV=1","RING-type E3 ubiquitin transferase OS=Dorcoceras hygrometricum OX=472368 GN=F511_15915 PE=4 SV=1","H","Coenzyme transport and metabolism","U-box domain-containing protein 30-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c86264.graph_c1",1,0.05,0,0,0,0,2987,146.99,3759,211.88,4348,212.83,4.17e-78,10.66230014,"up","--","--","Molecular Function: aspartic-type endopeptidase activity (GO:0004190);; ","K22683|2.0e-65|cqi:110691273|K22683 aspartyl protease family protein [EC:3.4.23.-] | (RefSeq) aspartyl protease family protein 2-like","[O]","Posttranslational modification, protein turnover, chaperones ","Xylanase inhibitor N-terminal;; Xylanase inhibitor C-terminal;; Eukaryotic aspartyl protease","Aspartic proteinase NANA, chloroplast OS=Arabidopsis thaliana OX=3702 GN=NANA PE=1 SV=1","Aspartic protein nepenthesin-2 OS=Dorcoceras hygrometricum OX=472368 GN=F511_01413 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","aspartic proteinase NANA, chloroplast-like isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c112870.graph_c0",20,0.62,30,0.87,25,0.8,9,0.28,15,0.54,12,0.38,0.008040293,-1.286710459,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112461.graph_c0",463,35.23,519,37.56,466,37.58,161,15.28,136,12.38,167,14.05,3.3e-55,-1.957563792,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_11070 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC105163067 isoform X2 [Sesamum indicum]","--","--"]
["c113160.graph_c0",80,2.18,78,2.01,57,1.57,303,8.32,212,6.7,288,7.82,2e-16,1.560014092,"up","--","--","Cellular Component: vacuole (GO:0005773);; ","--","[C]","Energy production and conversion ","--","CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana OX=3702 GN=CBSX6 PE=1 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00017546001 PE=4 SV=1","C","Energy production and conversion","CBS domain-containing protein CBSX6-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c92404.graph_c0",11,0.79,3,0.2,6,0.49,37,2.82,41,3.44,24,1.83,0.000441199,1.877118872,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23072 PE=4 SV=1","--","--","hypothetical protein CDL12_23072 [Handroanthus impetiginosus]","--","--"]
["c111265.graph_c0",16,0.66,22,0.84,18,0.82,59,2.59,88,5.43,108,5,1.52e-07,1.804528296,"up","--","--","Molecular Function: RNA binding (GO:0003723);; ","K18757|1.1e-44|oeu:111411922|K18757 la-related protein 1 | (RefSeq) la-related protein 1A-like isoform X1","--","--","--","--","HTH La-type RNA-binding domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29512 PE=4 SV=1","--","--","la-related protein 1A-like isoform X4 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c107721.graph_c0",671,32.2,740,32.84,701,34.21,370,16.62,337,17.18,371,16.35,1.96e-39,-1.289911803,"down","--","--","Molecular Function: DNA binding (GO:0003677);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Cellular Component: integral component of membrane (GO:0016021);; ","K00521|2.7e-32|cmos:111447866|K00521 ferric-chelate reductase [EC:1.16.1.7] | (RefSeq) ferric reduction oxidase 7, chloroplastic-like","--","--","No apical meristem (NAM) protein","NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1","Nam 18 OS=Solanum tuberosum OX=4113 GN=102582995 PE=4 SV=1","K","Transcription","NAC domain-containing protein 100-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c38242.graph_c0",76,6.54,81,6.57,63,5.57,1,0.09,0,0,0,0,1.14e-18,-6.143365832,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c114008.graph_c0",122,3.41,132,3.46,118,3.39,427,12.42,382,12.67,417,11.98,5.44e-23,1.391217484,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_22763 PE=4 SV=1","--","--","uncharacterized protein LOC111369486 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106835.graph_c3",422,23.28,436,23.08,408,23.37,48,2.77,24,1.6,45,2.59,1.93e-92,-3.728330118,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K15601|8.0e-58|psom:113331285|K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65] | (RefSeq) lysine-specific demethylase JMJ25-like","[R]","General function prediction only ","Integrase core domain","Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51486 PE=4 SV=1","L","Replication, recombination and repair","ABC transporter C family member 10 [Capsicum annuum]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c113864.graph_c0",3456,47.49,3472,45.09,3342,47.38,1980,27.39,1681,26.69,1895,26.08,9.97e-93,-1.209141038,"down","[S]","Function unknown ","Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332);; Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: NADP binding (GO:0050661);; Molecular Function: NAD binding (GO:0051287);; ","K00020|1.9e-55|qsu:111987869|K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] | (RefSeq) uncharacterized protein LOC111987869","[R]","General function prediction only ","NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase;; NAD binding domain of 6-phosphogluconate dehydrogenase;; Sugar-binding N-terminal domain;; NADP oxidoreductase coenzyme F420-dependent;; Fructose-bisphosphate aldolase class-II;; Nucleotide-binding C-terminal domain;; Fructose-bisphosphate aldolase class-II","--","Putative dehydrogenase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02964 PE=3 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111372317 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488);; biological process: single-organism process (GO:0044699)","Valine, leucine and isoleucine degradation (ko00280)"]
["c111199.graph_c0",204,6.43,142,5.19,122,4.86,90,3.32,76,3.38,103,3.97,3.59e-07,-1.110258491,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: myo-inositol:proton symporter activity (GO:0005366);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: glucose import (GO:0046323);; ","K08150|0.0e+00|oeu:111365997|K08150 MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13 | (RefSeq) inositol transporter 4-like","[R]","General function prediction only ","Sugar (and other) transporter;; Major Facilitator Superfamily;; HECT-domain (ubiquitin-transferase)","Inositol transporter 4 OS=Arabidopsis thaliana OX=3702 GN=INT4 PE=1 SV=1","MFS domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a003520mg PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","inositol transporter 4-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c118314.graph_c0",30,7,25,5.45,43,10.22,0,0,0,0,2,0.47,5.1e-11,-4.712363676,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116117.graph_c0",1179,101.14,1319,107.96,1201,109.34,281,7.92,275,11.31,349,10.32,8.97e-145,-2.350512065,"down","--","--","--","--","--","--","N-terminal C2 in EEIG1 and EHBP1 proteins","--","Putative centromere-associated protein E OS=Davidia involucrata OX=16924 GN=Din_011817 PE=4 SV=1","S","Function unknown","putative leucine-rich repeat-containing protein DDB_G0290503 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c110870.graph_c0",411,18.62,460,19.8,460,21.49,115,5.05,75,3.8,82,3.61,4.93e-62,-2.598110513,"down","[HJ]","--","Biological Process: biological_process (GO:0008150);; Biological Process: response to radiation (GO:0009314);; Biological Process: response to light stimulus (GO:0009416);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: response to organic substance (GO:0010033);; Biological Process: response to chemical (GO:0042221);; Biological Process: response to stimulus (GO:0050896);; ","K14487|0.0e+00|oeu:111412397|K14487 auxin responsive GH3 gene family | (RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9","--","--","GH3 auxin-responsive promoter","Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana OX=3702 GN=GH3.9 PE=2 SV=1","Putative indole-3-acetic acid-amido synthetase GH3.9 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_040452 PE=3 SV=1","S","Function unknown","putative indole-3-acetic acid-amido synthetase GH3.9 [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896)","Plant hormone signal transduction (ko04075)"]
["c106516.graph_c0",1,0.03,1,0.03,2,0.06,89,2.37,106,3.19,98,2.54,1.17e-18,5.153829993,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K02184|2.3e-72|sind:105170502|K02184 formin 2 | (RefSeq) formin-like protein 1","[TZ]","--","Formin Homology 2 Domain","Formin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=FH8 PE=1 SV=1","Formin-like protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_13051 PE=3 SV=1","--","--","formin-like protein 8 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c101481.graph_c1",1144,66.4,1241,70.77,1098,65.45,653,43.46,566,39.69,630,37.04,2.71e-54,-1.233586612,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K13172|9.4e-18|cmax:111493922|K13172 serine/arginine repetitive matrix protein 2 | (RefSeq) uncharacterized protein LOC111493922 isoform X1","--","--","QWRF family","AUGMIN subunit 8 OS=Arabidopsis thaliana OX=3702 GN=AUG8 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19194 PE=3 SV=1","S","Function unknown","AUGMIN subunit 8-like isoform X2 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c93874.graph_c0",19,0.84,20,0.84,20,0.9,93,3.99,117,5.87,135,5.81,6.85e-13,2.168666037,"up","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22845|1.1e-142|nnu:104600246|K22845 phlorizin synthase [EC:2.4.1.357] | (RefSeq) UDP-glycosyltransferase 88B1-like","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","UDP-glycosyltransferase 88B1 OS=Stevia rebaudiana OX=55670 GN=UGT88B1 PE=2 SV=1","Glycosyltransferase OS=Davidia involucrata OX=16924 GN=Din_002471 PE=3 SV=1","--","--","UDP-glycosyltransferase 88B1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Flavonoid biosynthesis (ko00941)"]
["c85334.graph_c0",23,2.03,32,2.66,27,2.45,2,0.18,2,0.21,2,0.18,1.03e-08,-3.574017108,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98889.graph_c0",86,11.82,102,13.17,76,10.75,327,46.06,262,42.29,357,50,3.51e-19,1.504064343,"up","--","--","Cellular Component: membrane (GO:0016020);; ","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_001785 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111374426 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020)","--"]
["c103862.graph_c0",115,11.15,189,16.7,146,14.26,414,38.23,561,59.64,643,58.28,1.62e-18,1.514845897,"up","[G]","Carbohydrate transport and metabolism ","Biological Process: carbohydrate metabolic process (GO:0005975);; Molecular Function: raucaffricine beta-glucosidase activity (GO:0050247);; ","K12695|5.0e-39|sind:105161651|K12695 raucaffricine beta-D-glucosidase / vomilenine glucosyltransferase [EC:3.2.1.125 2.4.1.219] | (RefSeq) beta-glucosidase-like","[G]","Carbohydrate transport and metabolism ","Glycosyl hydrolase family 1;; Glycosyl hydrolase family 1","Strictosidine-O-beta-D-glucosidase OS=Rauvolfia serpentina OX=4060 GN=SGR1 PE=1 SV=1","Beta-glucosidase, lactase phlorizinhydrolase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22581 PE=3 SV=1","G","Carbohydrate transport and metabolism","beta-glucosidase-like isoform X1 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; molecular function: catalytic activity (GO:0003824)","Indole alkaloid biosynthesis (ko00901)"]
["c90054.graph_c0",12,0.99,9,0.7,13,1.34,105,10.99,112,13.71,124,12.42,6.91e-18,2.904809695,"up","--","--","Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K09184|1.3e-06|dcr:108219662|K09184 GATA-binding protein, other eukaryote | (RefSeq) GATA transcription factor 11-like","[K]","Transcription ","GATA zinc finger","GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2","GATA-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08092 PE=4 SV=1","K","Transcription","GATA transcription factor 16-like [Olea europaea var. sylvestris]","biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c95503.graph_c0",148,4.63,159,4.7,149,4.83,768,24.52,670,24.51,834,26.52,5.65e-65,1.983596676,"up","--","--","--","--","--","--","Cgr1 family","--","Coiled-coil domain-containing protein 86 OS=Striga asiatica OX=4170 GN=STAS_24625 PE=4 SV=1","S","Function unknown","coiled-coil domain-containing protein 86 [Olea europaea var. sylvestris]","--","--"]
["c100061.graph_c0",0,0,0,0,0,0,40,1.56,36,1.6,68,2.63,2.27e-11,5.420343864,"up","--","--","--","--","--","--","--","--","DUF4378 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13519 PE=4 SV=1","--","--","uncharacterized protein LOC111369435 [Olea europaea var. sylvestris]","--","--"]
["c101823.graph_c0",22,1.24,33,1.76,23,1.34,15,0.88,2,0.13,15,0.87,0.004701801,-1.504710588,"down","--","--","Molecular Function: zinc ion binding (GO:0008270);; ","K10664|6.7e-25|thj:104816070|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL57","[O]","Posttranslational modification, protein turnover, chaperones ","--","RING-H2 finger protein ATL57 OS=Arabidopsis thaliana OX=3702 GN=ATL57 PE=2 SV=1","RING-H2 finger protein ATL57 OS=Solanum tuberosum OX=4113 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","RING-H2 finger protein ATL57-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c107136.graph_c0",39,6.38,27,4.68,25,4.07,10,2.02,9,1.79,17,2.95,0.000649356,-1.573973193,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c117360.graph_c0",432,16.33,419,14.98,377,14.58,39,1.43,40,1.94,66,2.41,2.38e-82,-3.379588347,"down","--","--","Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: DNA binding (GO:0003677);; Molecular Function: catalytic activity (GO:0003824);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: peroxisome (GO:0005777);; Cellular Component: cell-cell junction (GO:0005911);; Biological Process: lipid metabolic process (GO:0006629);; Biological Process: phospholipid metabolic process (GO:0006644);; Biological Process: sesquiterpenoid metabolic process (GO:0006714);; Biological Process: isoprenoid metabolic process (GO:0006720);; Biological Process: terpenoid metabolic process (GO:0006721);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: response to stress (GO:0006950);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: isoprenoid catabolic process (GO:0008300);; Biological Process: lipid biosynthetic process (GO:0008610);; Biological Process: catabolic process (GO:0009056);; Biological Process: biosynthetic process (GO:0009058);; Biological Process: phospholipid catabolic process (GO:0009395);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to wounding (GO:0009611);; Molecular Function: cyclase activity (GO:0009975);; Biological Process: cellular process (GO:0009987);; Molecular Function: terpene synthase activity (GO:0010333);; Molecular Function: sesquiterpene synthase activity (GO:0010334);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: sesquiterpenoid biosynthetic process (GO:0016106);; Biological Process: terpenoid biosynthetic process (GO:0016114);; Biological Process: terpenoid catabolic process (GO:0016115);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: carbon-oxygen lyase activity (GO:0016835);; Molecular Function: carbon-oxygen lyase activity, acting on phosphates (GO:0016838);; Biological Process: organophosphate metabolic process (GO:0019637);; Cellular Component: cell junction (GO:0030054);; Biological Process: terpene metabolic process (GO:0042214);; Cellular Component: microbody (GO:0042579);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular lipid catabolic process (GO:0044242);; Biological Process: cellular catabolic process (GO:0044248);; Biological Process: cellular biosynthetic process (GO:0044249);; Biological Process: cellular lipid metabolic process (GO:0044255);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: farnesyl diphosphate metabolic process (GO:0045338);; Biological Process: farnesyl diphosphate catabolic process (GO:0045339);; Biological Process: terpene biosynthetic process (GO:0046246);; Biological Process: organophosphate catabolic process (GO:0046434);; Molecular Function: protein dimerization activity (GO:0046983);; Biological Process: response to stimulus (GO:0050896);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: sesquiterpene metabolic process (GO:0051761);; Biological Process: sesquiterpene biosynthetic process (GO:0051762);; Cellular Component: symplast (GO:0055044);; Biological Process: organic substance metabolic process (GO:0071704);; Molecular Function: (-)-E-beta-caryophyllene synthase activity (GO:0080016);; Molecular Function: alpha-humulene synthase activity (GO:0080017);; Biological Process: response to herbivore (GO:0080027);; Biological Process: organic substance catabolic process (GO:1901575);; Biological Process: organic substance biosynthetic process (GO:1901576);; ","K15803|2.8e-261|oeu:111379520|K15803 (-)-germacrene D synthase [EC:4.2.3.75] | (RefSeq) vetispiradiene synthase 2-like","--","--","Terpene synthase family, metal binding domain;; Terpene synthase family 2, C-terminal metal binding;; Terpene synthase, N-terminal domain;; Domain of unknown function (DUF4413)","(-)-5-epieremophilene synthase STPS3 OS=Salvia miltiorrhiza OX=226208 GN=STPS3 PE=1 SV=1","Putative terpene synthase 2 OS=Eremophila denticulata subsp. trisulcata OX=2652520 PE=2 SV=1","S","Function unknown","vetispiradiene synthase 2-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: cell junction (GO:0030054);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: symplast (GO:0055044);; biological process: multi-organism process (GO:0051704)","Sesquiterpenoid and triterpenoid biosynthesis (ko00909)"]
["c103363.graph_c0",15,0.75,15,1.09,7,0.36,38,1.95,36,2.06,37,1.84,0.00753682,1.204148929,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c92908.graph_c0",80,6.19,72,5.15,65,5.22,36,2.63,38,3.37,30,2.33,3.88e-06,-1.345650988,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K00924|5.3e-57|lang:109360749|K00924 kinase [EC:2.7.1.-] | (RefSeq) receptor protein kinase TMK1-like","--","--","--","Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1","Receptor-like kinase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08783 PE=3 SV=1","T","Signal transduction mechanisms","receptor-like kinase TMK4 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106016.graph_c0",45,2.01,39,1.68,37,1.71,129,5.88,114,5.98,146,6.65,4.56e-08,1.336733066,"up","--","--","Molecular Function: glycylpeptide N-tetradecanoyltransferase activity (GO:0004379);; Biological Process: N-terminal protein myristoylation (GO:0006499);; ","K00671|4.0e-250|oeu:111399474|K00671 glycylpeptide N-tetradecanoyltransferase [EC:2.3.1.97] | (RefSeq) glycylpeptide N-tetradecanoyltransferase 1-like","[I]","Lipid transport and metabolism ","Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain;; Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain","Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=NMT1 PE=1 SV=2","Glycylpeptide N-tetradecanoyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04312 PE=3 SV=1","I","Lipid transport and metabolism","glycylpeptide N-tetradecanoyltransferase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c91068.graph_c0",191,18.52,177,14.56,178,16.5,87,8.33,124,13.88,126,11.2,1.49e-07,-1.006794549,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20950 PE=4 SV=1","--","--","uncharacterized protein LOC111371295 [Olea europaea var. sylvestris]","--","--"]
["c113769.graph_c1",19,1.29,19,1,17,1.04,331,19.86,327,21.96,360,20.78,6.86e-58,3.825396597,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: Rho GDP-dissociation inhibitor activity (GO:0005094);; Cellular Component: cytoplasm (GO:0005737);; ","K10871|1.1e-124|oeu:111399723|K10871 RAD51-like protein 3 | (RefSeq) DNA repair protein RAD51 homolog 4","[T]","Signal transduction mechanisms ","RHO protein GDP dissociation inhibitor;; Rad51;; KaiC;; AAA domain;; recA bacterial DNA recombination protein;; DnaB-like helicase C terminal domain","DNA repair protein RAD51 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=RAD51D PE=2 SV=2","Rho GDP-dissociation inhibitor OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05984 PE=3 SV=1","L","Replication, recombination and repair","DNA repair protein RAD51 homolog 4 [Olea europaea var. sylvestris]","molecular function: molecular function regulator (GO:0098772);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","Homologous recombination (ko03440)"]
["c111821.graph_c0",168,25.19,169,24.65,143,17.54,54,5.27,111,10.88,110,11.93,3.23e-06,-1.102176228,"down","--","--","--","--","--","--","Universal stress protein family","--","Usp domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_028146 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111397460 [Olea europaea var. sylvestris]","--","--"]
["c108062.graph_c1",10961,280.7,11283,277.13,10860,288.44,6142,172.27,4930,159.02,5683,158.96,4.5e-118,-1.306250084,"down","[I]","Lipid transport and metabolism ","Molecular Function: acyl-CoA oxidase activity (GO:0003997);; Cellular Component: peroxisome (GO:0005777);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Molecular Function: FAD binding (GO:0071949);; ","K00232|7.9e-266|oeu:111392908|K00232 acyl-CoA oxidase [EC:1.3.3.6] | (RefSeq) acyl-coenzyme A oxidase 3, peroxisomal-like","[IQ]","--","Acyl-CoA dehydrogenase, middle domain;; Acyl-CoA oxidase;; Acyl-CoA dehydrogenase, C-terminal domain","Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ACX3 PE=1 SV=1","Acyl-coenzyme A oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18436 PE=3 SV=1","--","--","acyl-coenzyme A oxidase 3, peroxisomal-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Fatty acid degradation (ko00071);; beta-Alanine metabolism (ko00410);; alpha-Linolenic acid metabolism (ko00592);; Propanoate metabolism (ko00640);; Biosynthesis of unsaturated fatty acids (ko01040);; Carbon metabolism (ko01200);; Fatty acid metabolism (ko01212);; Peroxisome (ko04146)"]
["c60423.graph_c0",4,0.24,2,0.11,2,0.12,34,2.05,70,4.82,60,3.59,1.07e-10,3.641076238,"up","[R]","General function prediction only ","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: xylan biosynthetic process (GO:0045492);; ","K18801|1.1e-48|atr:18427851|K18801 glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112] | (RefSeq) glucuronoxylan 4-O-methyltransferase 1","--","--","Polysaccharide biosynthesis","Protein IRX15-LIKE OS=Arabidopsis thaliana OX=3702 GN=IRX15-L PE=2 SV=1","Polysacc_synt_4 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03472 PE=4 SV=1","S","Function unknown","protein IRX15-LIKE-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c102505.graph_c0",150,12,195,14.36,152,12.07,95,7.82,94,9.14,92,7.1,3.92e-09,-1.128741469,"down","--","--","Biological Process: pollen tube guidance (GO:0010183);; Molecular Function: mediator complex binding (GO:0036033);; ","--","--","--","--","CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18746 PE=4 SV=1","--","--","CCG-binding protein 1-like [Olea europaea var. sylvestris]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: developmental process (GO:0032502);; biological process: locomotion (GO:0040011);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: multi-organism process (GO:0051704);; molecular function: binding (GO:0005488)","--"]
["c108539.graph_c3",3,0.12,3,0.25,1,0.09,21,1.56,26,2.35,17,1.17,0.000233649,2.483265104,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107534.graph_c1",229,8.28,192,6.52,182,6.8,2802,99.18,2602,105.31,2851,100.25,0,3.44540477,"up","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; ","K13495|4.9e-168|oeu:111375019|K13495 cis-zeatin O-glucosyltransferase [EC:2.4.1.215] | (RefSeq) zeatin O-xylosyltransferase-like","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","Zeatin O-glucosyltransferase OS=Phaseolus lunatus OX=3884 GN=ZOG1 PE=2 SV=1","Glycosyltransferase (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a027163mg PE=3 SV=1","--","--","zeatin O-xylosyltransferase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Zeatin biosynthesis (ko00908)"]
["c113148.graph_c0",642,41.24,744,45.27,664,43.93,271,25.19,260,26.25,322,31.02,2.77e-51,-1.584423662,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","--","--","--","--","--","Protein kinase domain-containing protein OS=Morella rubra OX=262757 GN=CJ030_MR0G026029 PE=4 SV=1","T","Signal transduction mechanisms","receptor-like protein 12 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c106248.graph_c0",50,3.19,2,0.19,2,0.2,208,12.52,459,30.12,392,24.69,0.007806557,2.544985896,"up","--","--","Biological Process: reproduction (GO:0000003);; Biological Process: developmental process involved in reproduction (GO:0003006);; Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: transmembrane receptor protein serine/threonine kinase activity (GO:0004675);; Molecular Function: transmembrane signaling receptor activity (GO:0004888);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: cell wall (GO:0005618);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: endosome (GO:0005768);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cellular protein modification process (GO:0006464);; Biological Process: protein phosphorylation (GO:0006468);; Biological Process: phosphorus metabolic process (GO:0006793);; Biological Process: phosphate-containing compound metabolic process (GO:0006796);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: transport (GO:0006810);; Biological Process: endocytosis (GO:0006897);; Biological Process: receptor-mediated endocytosis (GO:0006898);; Biological Process: response to stress (GO:0006950);; Biological Process: defense response (GO:0006952);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: cell surface receptor signaling pathway (GO:0007166);; Biological Process: enzyme linked receptor protein signaling pathway (GO:0007167);; Biological Process: transmembrane receptor protein serine/threonine kinase signaling pathway (GO:0007178);; Biological Process: multicellular organism development (GO:0007275);; Biological Process: pattern specification process (GO:0007389);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Cellular Component: plant-type cell wall (GO:0009505);; Cellular Component: secondary cell wall (GO:0009531);; Biological Process: embryo sac development (GO:0009553);; Biological Process: detection of biotic stimulus (GO:0009595);; Biological Process: response to external stimulus (GO:0009605);; Biological Process: response to biotic stimulus (GO:0009607);; Biological Process: response to bacterium (GO:0009617);; Biological Process: anatomical structure morphogenesis (GO:0009653);; Biological Process: embryo development (GO:0009790);; Biological Process: post-embryonic development (GO:0009791);; Biological Process: embryo development ending in seed dormancy (GO:0009793);; Biological Process: axis specification (GO:0009798);; Biological Process: tissue development (GO:0009888);; Biological Process: cellular process (GO:0009987);; Biological Process: meristem maintenance (GO:0010073);; Biological Process: fruit development (GO:0010154);; Biological Process: regulation of anion channel activity (GO:0010359);; Biological Process: regulation of cell fate commitment (GO:0010453);; Cellular Component: endomembrane system (GO:0012505);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: cellular component organization (GO:0016043);; Biological Process: detection of bacterium (GO:0016045);; Biological Process: vesicle-mediated transport (GO:0016192);; Molecular Function: kinase activity (GO:0016301);; Biological Process: phosphorylation (GO:0016310);; Molecular Function: transferase activity (GO:0016740);; Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);; Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);; Molecular Function: transmembrane receptor protein kinase activity (GO:0019199);; Biological Process: protein metabolic process (GO:0019538);; Biological Process: reproductive process (GO:0022414);; Biological Process: regulation of anatomical structure morphogenesis (GO:0022603);; Biological Process: regulation of transmembrane transporter activity (GO:0022898);; Biological Process: signaling (GO:0023052);; Cellular Component: external encapsulating structure (GO:0030312);; Cellular Component: cytoplasmic vesicle (GO:0031410);; Cellular Component: vesicle (GO:0031982);; Biological Process: regulation of transporter activity (GO:0032409);; Biological Process: regulation of ion transmembrane transporter activity (GO:0032412);; Biological Process: multicellular organismal process (GO:0032501);; Biological Process: developmental process (GO:0032502);; Biological Process: regulation of localization (GO:0032879);; Biological Process: macromolecule localization (GO:0033036);; Biological Process: polysaccharide localization (GO:0033037);; Biological Process: cellular response to stress (GO:0033554);; Biological Process: regulation of transmembrane transport (GO:0034762);; Biological Process: regulation of ion transmembrane transport (GO:0034765);; Biological Process: protein modification process (GO:0036211);; Molecular Function: signaling receptor activity (GO:0038023);; Biological Process: cell wall modification (GO:0042545);; Biological Process: regulation of cell fate specification (GO:0042659);; Biological Process: defense response to bacterium (GO:0042742);; Biological Process: macromolecule metabolic process (GO:0043170);; Biological Process: response to external biotic stimulus (GO:0043207);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Biological Process: regulation of ion transport (GO:0043269);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: regulation of anion transport (GO:0044070);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Biological Process: cellular macromolecule metabolic process (GO:0044260);; Biological Process: cellular protein metabolic process (GO:0044267);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell wall part (GO:0044426);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete external encapsulating structure part (GO:0044462);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: external encapsulating structure organization (GO:0045229);; Biological Process: regulation of cell differentiation (GO:0045595);; Cellular Component: Casparian strip (GO:0048226);; Biological Process: gametophyte development (GO:0048229);; Biological Process: seed development (GO:0048316);; Biological Process: meristem development (GO:0048507);; Biological Process: reproductive structure development (GO:0048608);; Biological Process: system development (GO:0048731);; Biological Process: anatomical structure development (GO:0048856);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of developmental process (GO:0050793);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: regulation of transport (GO:0051049);; Biological Process: localization (GO:0051179);; Biological Process: establishment of localization (GO:0051234);; Biological Process: regulation of multicellular organismal process (GO:0051239);; Biological Process: regulation of cell division (GO:0051302);; Biological Process: detection of stimulus (GO:0051606);; Biological Process: cellular localization (GO:0051641);; Biological Process: multi-organism process (GO:0051704);; Biological Process: response to other organism (GO:0051707);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: cell wall thickening (GO:0052386);; Biological Process: defense response by cell wall thickening (GO:0052482);; Biological Process: defense response by callose deposition (GO:0052542);; Biological Process: callose deposition in cell wall (GO:0052543);; Biological Process: defense response by callose deposition in cell wall (GO:0052544);; Biological Process: callose localization (GO:0052545);; Molecular Function: molecular transducer activity (GO:0060089);; Biological Process: reproductive system development (GO:0061458);; Biological Process: specification of axis polarity (GO:0065001);; Biological Process: biological regulation (GO:0065007);; Biological Process: regulation of molecular function (GO:0065009);; Biological Process: cellular macromolecule localization (GO:0070727);; Biological Process: cell wall organization or biogenesis (GO:0071554);; Biological Process: cell wall organization (GO:0071555);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Cellular Component: cell periphery (GO:0071944);; Biological Process: plant epidermis development (GO:0090558);; Biological Process: specification of plant organ axis polarity (GO:0090708);; Cellular Component: intracellular vesicle (GO:0097708);; Biological Process: defense response to other organism (GO:0098542);; Biological Process: detection of other organism (GO:0098543);; Biological Process: detection of external biotic stimulus (GO:0098581);; Biological Process: import into cell (GO:0098657);; Biological Process: plant organ development (GO:0099402);; Molecular Function: catalytic activity, acting on a protein (GO:0140096);; Biological Process: organonitrogen compound metabolic process (GO:1901564);; Biological Process: regulation of anion transmembrane transport (GO:1903959);; Biological Process: plant organ morphogenesis (GO:1905392);; Biological Process: regulation of plant organ morphogenesis (GO:1905421);; Biological Process: regulation of multicellular organismal development (GO:2000026);; Biological Process: regulation of root morphogenesis (GO:2000067);; Biological Process: regulation of root development (GO:2000280);; ","K13466|2.6e-30|mdm:103439827|K13466 EIX receptor 1/2 | (RefSeq) receptor-like protein EIX2","--","--","Leucine rich repeat","Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2","Leucine-rich repeat protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_01686 PE=4 SV=1","P","Inorganic ion transport and metabolism","Leucine-rich repeat protein [Handroanthus impetiginosus]","biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: developmental process (GO:0032502);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: signal transducer activity (GO:0004871);; molecular function: molecular transducer activity (GO:0060089);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; biological process: localization (GO:0051179);; biological process: multicellular organismal process (GO:0032501);; biological process: multi-organism process (GO:0051704);; cellular component: membrane part (GO:0044425);; biological process: cellular component organization or biogenesis (GO:0071840)","Plant-pathogen interaction (ko04626)"]
["c93108.graph_c1",2298,39.25,2322,37.7,2291,40.51,9208,198.82,7167,181.37,8360,177.4,3.25e-118,1.511904677,"up","[C]","Energy production and conversion ","Biological Process: tricarboxylic acid cycle (GO:0006099);; Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964);; Biological Process: carbon fixation (GO:0015977);; ","K01595|0.0e+00|oeu:111372069|K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] | (RefSeq) LOW QUALITY PROTEIN: phosphoenolpyruvate carboxylase 2-like","--","--","Phosphoenolpyruvate carboxylase;; Phosphoenolpyruvate carboxylase;; Phosphoenolpyruvate carboxylase","Phosphoenolpyruvate carboxylase 2 OS=Flaveria trinervia OX=4227 GN=PPCC PE=1 SV=1","Phosphoenolpyruvate carboxylase OS=Coffea canephora OX=49390 GN=GSCOC_T00016854001 PE=3 SV=1","C","Energy production and conversion","LOW QUALITY PROTEIN: phosphoenolpyruvate carboxylase 2-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Pyruvate metabolism (ko00620);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200)"]
["c85712.graph_c0",32,3.11,52,4.75,36,3.59,112,11.12,129,14.69,81,7.99,0.000209595,1.095657469,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c79022.graph_c0",20,2.92,28,3.84,13,1.94,110,16.45,106,18.17,128,18.99,1.5e-12,2.123300319,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_11553 PE=4 SV=1","--","--","hypothetical protein A4A49_11553 [Nicotiana attenuata]","--","--"]
["c74238.graph_c0",31,4.35,30,3.95,38,5.46,12,1.72,10,1.65,16,2.28,0.000193653,-1.627561565,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112881.graph_c0",4,0.48,4,0.08,6,0.13,24,0.73,33,2.41,45,1.89,2.32e-05,2.314135949,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110176.graph_c1",24,1.4,33,2.18,30,2.51,5,0.28,1,0.06,2,0.09,1.75e-08,-3.352433161,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; ","K11649|7.0e-35|peq:110039585|K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C | (RefSeq) SWI/SNF complex subunit SWI3D","[R]","General function prediction only ","gag-polypeptide of LTR copia-type","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010467 PE=4 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","hypothetical protein EZV62_010467 [Acer yangbiense]","molecular function: binding (GO:0005488)","--"]
["c96748.graph_c0",42,4.21,51,4.83,36,3.54,160,14.62,186,18.77,201,17.11,1.39e-14,1.741594352,"up","--","--","Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742);; ","--","--","--","--","Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM6 PE=1 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a016428mg PE=4 SV=1","S","Function unknown","mitochondrial import receptor subunit TOM6 homolog [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c82955.graph_c0",157,18.03,155,16.75,121,14.25,12,1.41,12,1.62,9,1.05,8.55e-36,-3.916537773,"down","--","--","Biological Process: lipid transport (GO:0006869);; ","--","--","--","Probable lipid transfer;; Protease inhibitor/seed storage/LTP family","Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1","Non-specific lipid-transfer protein type 2 (Fragment) OS=Olea europaea OX=4146 PE=2 SV=1","S","Function unknown","non-specific lipid-transfer protein 2-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c96922.graph_c0",0,0,6,0.18,3,0.1,22,0.72,29,1.09,34,1.11,3.99e-05,2.574703799,"up","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|3.7e-230|egr:104449894|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 1.2","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana OX=3702 GN=NPF1.2 PE=1 SV=1","H+/oligopeptide symporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13689 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 1.2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c93153.graph_c1",1,0.06,2,0.12,1,0.06,37,1.68,41,1.83,26,1.12,3.26e-08,3.709732782,"up","[R]","General function prediction only ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K12489|3.4e-128|fve:101314822|K12489 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein | (RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3","[T]","Signal transduction mechanisms ","Protein kinase domain;; Protein tyrosine and serine/threonine kinase","Inactive leucine-rich repeat receptor-like protein kinase CORYNE OS=Arabidopsis thaliana OX=3702 GN=CRN PE=1 SV=1","Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_032235 PE=4 SV=1","T","Signal transduction mechanisms","inactive leucine-rich repeat receptor-like protein kinase CORYNE [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Endocytosis (ko04144)"]
["c112748.graph_c0",75,1.21,59,0.91,57,0.96,683,11.5,687,13.27,880,14.64,9.02e-98,3.21072986,"up","--","--","Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; ","K18806|3.5e-91|mis:MICPUN_63076|K18806 kinesin family member 7 | (RefSeq) predicted protein","[Z]","Cytoskeleton ","Kinesin motor domain;; Microtubule binding","Kinesin-like protein KIN-4C OS=Arabidopsis thaliana OX=3702 GN=KIN4C PE=2 SV=2","Kinesin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14732 PE=3 SV=1","Z","Cytoskeleton","kinesin-like protein KIN-4C isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c102414.graph_c0",23,1.23,33,1.98,15,0.86,173,9.71,162,10.45,195,11,3.53e-22,2.532236582,"up","--","--","Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Molecular Function: sequence-specific DNA binding (GO:0043565);; ","K18834|6.3e-08|cann:107854014|K18834 WRKY transcription factor 1 | (RefSeq) probable WRKY transcription factor 33","--","--","--","Probable WRKY transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=WRKY13 PE=1 SV=1","WRKY protein OS=Salvia miltiorrhiza OX=226208 GN=WRKY19 PE=2 SV=1","K","Transcription","WRKY protein [Salvia miltiorrhiza]","molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","Plant-pathogen interaction (ko04626)"]
["c98390.graph_c0",163,7.61,173,6.77,124,5.84,436,18.21,436,20.65,509,20.98,7.09e-20,1.25923956,"up","--","--","Molecular Function: protein binding (GO:0005515);; ","K11838|2.7e-45|vvi:100266796|K11838 ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12] | (RefSeq) ubiquitin carboxyl-terminal hydrolase 12","[O]","Posttranslational modification, protein turnover, chaperones ","MATH domain","Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2","MATH domain-containing protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS37082 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","MATH domain and coiled-coil domain-containing protein At3g58360-like isoform X2 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c98122.graph_c0",10,1.33,17,1.99,18,2.27,349,33.56,440,47.9,476,46.41,4.82e-65,4.405441449,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: heme binding (GO:0020037);; Molecular Function: metal ion binding (GO:0046872);; ","K23490|7.2e-52|oeu:111371346|K23490 cytochrome b5 | (RefSeq) cytochrome b5-like","[C]","Energy production and conversion ","--","Cytochrome b5 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Cytochrome b5 heme-binding domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_041432 PE=3 SV=1","C","Energy production and conversion","cytochrome b5-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: binding (GO:0005488)","--"]
["c106179.graph_c0",39,1.13,48,1.3,46,1.3,248,7.04,318,10.64,383,11.54,2.94e-32,2.480175468,"up","--","--","Biological Process: cytokinesis by cell plate formation (GO:0000911);; ","--","--","--","--","Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana OX=3702 GN=SCD2 PE=1 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27782 PE=4 SV=1","--","--","coiled-coil domain-containing protein SCD2 [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","--"]
["c78246.graph_c0",84,3.59,73,3.27,81,3.61,0,0,0,0,0,0,8.26e-19,-6.633273786,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102249.graph_c0",458,10.28,570,11.6,552,12.16,216,4.6,151,3.7,197,4.16,3.39e-41,-1.804853396,"down","[IR]","--","Cellular Component: membrane (GO:0016020);; Molecular Function: lyase activity (GO:0016829);; Molecular Function: long-chain-alcohol oxidase activity (GO:0046577);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; ","K17756|0.0e+00|oeu:111393269|K17756 long-chain-alcohol oxidase [EC:1.1.3.20] | (RefSeq) long-chain-alcohol oxidase FAO2-like","--","--","GMC oxidoreductase;; GMC oxidoreductase;; FAD binding domain;; FAD binding domain","Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1","Long-chain-alcohol oxidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22682 PE=3 SV=1","I","Lipid transport and metabolism","long-chain-alcohol oxidase FAO2-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","--"]
["c113141.graph_c0",19,0.35,22,0.36,21,0.4,160,2.88,150,3.13,187,3.4,5.1e-23,2.624429667,"up","--","--","Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Molecular Function: metal ion binding (GO:0046872);; ","K15718|7.7e-237|oeu:111388392|K15718 linoleate 9S-lipoxygenase [EC:1.13.11.58] | (RefSeq) probable linoleate 9S-lipoxygenase 5 isoform X1","--","--","Lipoxygenase;; Lipoxygenase;; PLAT/LH2 domain;; Lipoxygenase","Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum OX=4113 GN=LOX1.6 PE=1 SV=1","Lipoxygenase OS=Olea europaea OX=4146 GN=lox1 PE=2 SV=1","E","Amino acid transport and metabolism","probable linoleate 9S-lipoxygenase 5 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","Linoleic acid metabolism (ko00591)"]
["c83227.graph_c1",0,0,2,0.28,3,0.45,24,3.64,26,4.52,33,5.11,2.56e-06,3.166400039,"up","--","--","Molecular Function: RNA binding (GO:0003723);; Cellular Component: integral component of membrane (GO:0016021);; ","K18757|5.0e-63|oeu:111376669|K18757 la-related protein 1 | (RefSeq) la-related protein 1B-like","--","--","--","--","La-related protein 1-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_00981 PE=4 SV=1","--","--","la-related protein 1B-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c83301.graph_c0",58,5.67,64,5.9,54,5.42,12,1.2,4,0.46,17,1.69,2.74e-11,-2.631282538,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c104923.graph_c0",179,7.63,132,4.08,147,4.47,473,33.16,458,38.11,519,33.78,1.75e-21,1.330716358,"up","[T]","Signal transduction mechanisms ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; ","K04728|2.7e-16|pmum:103338375|K04728 serine-protein kinase ATM [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase ATM","--","--","PWWP domain;; Universal stress protein family","Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2","Non-specific serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22779 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111396934 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Homologous recombination (ko03440)"]
["c110249.graph_c0",71,1.99,64,1.98,74,2.1,205,7.26,216,8.57,217,7.39,5.36e-11,1.274936234,"up","[C]","Energy production and conversion ","Biological Process: cytokinin metabolic process (GO:0009690);; Molecular Function: cytokinin dehydrogenase activity (GO:0019139);; Molecular Function: FAD binding (GO:0071949);; ","K00279|4.9e-165|oeu:111388513|K00279 cytokinin dehydrogenase [EC:1.5.99.12] | (RefSeq) cytokinin dehydrogenase 5-like","[C]","Energy production and conversion ","FAD binding domain;; Cytokinin dehydrogenase 1, FAD and cytokinin binding","Cytokinin dehydrogenase 5 OS=Arabidopsis thaliana OX=3702 GN=CKX5 PE=2 SV=1","Cytokinin dehydrogenase OS=Solanum tuberosum OX=4113 GN=CKX4 PE=2 SV=1","C","Energy production and conversion","cytokinin dehydrogenase 5-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; molecular function: catalytic activity (GO:0003824);; biological process: single-organism process (GO:0044699);; molecular function: binding (GO:0005488)","Zeatin biosynthesis (ko00908)"]
["c103210.graph_c0",5,0.16,2,0.06,0,0,27,0.89,28,1.06,24,0.79,2.41e-05,2.761199297,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G023416 PE=4 SV=1","--","--","hypothetical protein CMV_010418 [Castanea mollissima]","--","--"]
["c75331.graph_c1",1607,131.94,1768,136.91,1551,130.84,879,73.87,866,83.47,1049,87.61,7.68e-56,-1.139965945,"down","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22845|1.6e-145|oeu:111405616|K22845 phlorizin synthase [EC:2.4.1.357] | (RefSeq) UDP-glycosyltransferase 88B1-like","[GC]","--","--","UDP-glycosyltransferase 88B1 OS=Stevia rebaudiana OX=55670 GN=UGT88B1 PE=2 SV=1","Glycosyltransferase OS=Forsythia intermedia OX=55183 GN=FkUGT11 PE=2 SV=1","--","--","UDP-glycosyltransferase 88B1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Flavonoid biosynthesis (ko00941)"]
["c41835.graph_c0",78,11.25,69,9.35,59,8.71,34,5.02,29,4.91,40,5.87,1.06e-05,-1.295086844,"down","[S]","Function unknown ","Cellular Component: extracellular space (GO:0005615);; ","K13449|1.1e-46|ats:109755779|K13449 pathogenesis-related protein 1 | (RefSeq) LOC109755779; pathogenesis-related protein PRB1-2-like","[S]","Function unknown ","Cysteine-rich secretory protein family","Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1","STS14 protein, putative OS=Theobroma cacao OX=3641 GN=TCM_038873 PE=4 SV=1","S","Function unknown","pathogenesis-related protein PR-1-like [Olea europaea var. sylvestris]","cellular component: extracellular region (GO:0005576);; cellular component: extracellular region part (GO:0044421)","MAPK signaling pathway - plant (ko04016);; Plant hormone signal transduction (ko04075);; Plant-pathogen interaction (ko04626)"]
["c97168.graph_c0",3465,253.37,4126,284.71,3762,282.84,80,5.97,60,5.18,87,6.53,0,-5.946219778,"down","--","--","Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","DREPP plasma membrane polypeptide","Plasma membrane-associated cation-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PCAP1 PE=1 SV=1","Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013816 PE=4 SV=1","S","Function unknown","plasma membrane-associated cation-binding protein 1 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c95483.graph_c0",23,3.26,36,5.34,29,4.82,112,20.33,93,20.4,101,16.76,3.61e-07,1.445134804,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c108812.graph_c0",172,5.76,211,6.68,165,5.69,98,3.36,98,3.85,95,3.25,3.09e-11,-1.219169525,"down","[E]","Amino acid transport and metabolism ","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K03294|2.1e-291|oeu:111412340|K03294 basic amino acid/polyamine antiporter, APA family | (RefSeq) cationic amino acid transporter 1-like","[E]","Amino acid transport and metabolism ","Amino acid permease;; Amino acid permease;; C-terminus of AA_permease","Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1","Amino acid transporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15765 PE=4 SV=1","E","Amino acid transport and metabolism","cationic amino acid transporter 1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c112209.graph_c0",9,0.17,6,0.11,8,0.16,78,2.56,92,2.6,100,2.39,3.03e-15,3.087951739,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K15333|3.6e-70|nsy:104224633|K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) uncharacterized protein LOC104224633","--","--","Subtilase family;; Fibronectin type-III domain;; Peptidase inhibitor I9","Subtilisin-like protease SBT4.14 OS=Arabidopsis thaliana OX=3702 GN=SBT4.14 PE=2 SV=1","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a002051mg PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","subtilisin-like protease SBT4.14 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c75998.graph_c0",35,3.1,24,2.01,15,1.37,81,7.35,80,8.32,74,6.67,7.68e-05,1.314173969,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K10664|1.3e-19|cmo:103488088|K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27] | (RefSeq) RING-H2 finger protein ATL11-like","[O]","Posttranslational modification, protein turnover, chaperones ","Ring finger domain;; Zinc finger, C3HC4 type (RING finger);; RING-like zinc finger;; RING-H2 zinc finger domain;; Zinc finger, C3HC4 type (RING finger);; Zinc finger, C3HC4 type (RING finger);; RING-type zinc-finger;; Anaphase-promoting complex subunit 11 RING-H2 finger","RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2","RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16113 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","RING-H2 finger protein ATL39-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c99501.graph_c0",1586,47.9,1619,46.31,1394,43.39,247,7.63,283,10.01,294,9.04,9.71e-206,-2.793864034,"down","--","--","Cellular Component: exocyst (GO:0000145);; Biological Process: exocytosis (GO:0006887);; Biological Process: protein transport (GO:0015031);; ","K07195|0.0e+00|oeu:111366598|K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70A1-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Exo70 exocyst complex subunit;; Exo70 exocyst complex subunit","--","Exocyst subunit Exo70 family protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12107 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","exocyst complex component EXO70A1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179)","--"]
["c100624.graph_c0",50,2.3,60,2.6,43,2.04,141,6.66,136,7.35,189,8.89,3.42e-08,1.263740819,"up","--","--","Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; ","K00599|2.1e-187|oeu:111407343|K00599 methyltransferase-like protein 6 [EC:2.1.1.-] | (RefSeq) methyltransferase-like protein 6 isoform X1","[R]","General function prediction only ","Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain;; Methyltransferase small domain","--","Methyltransferase-like protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a009894mg PE=3 SV=1","S","Function unknown","methyltransferase-like protein 6 isoform X2 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c42292.graph_c0",11,1.17,0,0,5,0.54,109,11.84,191,23.78,184,19.85,1.05e-05,3.551464944,"up","--","--","Molecular Function: electron transfer activity (GO:0009055);; ","--","--","--","Plastocyanin-like domain","--","Phytocyanin domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_07149 PE=4 SV=1","S","Function unknown","mavicyanin [Olea europaea var. sylvestris]","molecular function: electron carrier activity (GO:0009055)","--"]
["c108590.graph_c0",58,10.76,61,8.41,64,9.58,26,4.87,21,5.89,47,9.24,0.000124531,-1.26349206,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA helicase activity (GO:0003724);; Molecular Function: ATP binding (GO:0005524);; ","K14776|9.7e-12|sly:101249838|K14776 ATP-dependent RNA helicase DDX10/DBP4 [EC:3.6.4.13] | (RefSeq) DEAD-box ATP-dependent RNA helicase 32","[A]","RNA processing and modification ","DEAD/DEAH box helicase","DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0517000 PE=2 SV=2","Dead box ATP-dependent RNA helicase OS=Solanum tuberosum OX=4113 GN=102583283 PE=3 SV=1","A","RNA processing and modification","DEAD-box ATP-dependent RNA helicase 32 [Solanum lycopersicum]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824)","--"]
["c117651.graph_c1",181,12.65,177,10.98,160,11.24,98,5.9,92,7.09,97,6.12,1.62e-10,-1.162792173,"down","--","--","--","K11649|5.1e-25|peq:110039585|K11649 SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C | (RefSeq) SWI/SNF complex subunit SWI3D","[R]","General function prediction only ","gag-polypeptide of LTR copia-type","--","Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS33816 PE=4 SV=1","--","--","unnamed protein product [Microthlaspi erraticum]","--","--"]
["c115056.graph_c0",169,6.43,122,3.63,109,3.65,432,17.4,323,16.56,399,17.05,3.96e-13,1.194625974,"up","--","--","Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","K22848|2.0e-43|sind:105176799|K22848 diacylglycerol O-acyltransferase 2, plant [EC:2.3.1.20] | (RefSeq) diacylglycerol O-acyltransferase 2D","[I]","Lipid transport and metabolism ","Diacylglycerol acyltransferase","Diacylglycerol O-acyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=DGAT2 PE=1 SV=1","Acyltransferase OS=Olea europaea OX=4146 PE=2 SV=1","I","Lipid transport and metabolism","diacylglycerol acyltransferase type 2 [Olea europaea]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824)","Glycerolipid metabolism (ko00561)"]
["c89826.graph_c0",0,0,0,0,3,0.47,55,5.15,52,5.58,64,5.96,1.28e-12,4.626984365,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009113 PE=4 SV=1","S","Function unknown","hypothetical protein CK203_009113 [Vitis vinifera]","--","--"]
["c99219.graph_c0",44,1.5,37,1.2,43,1.51,220,7.65,186,7.38,223,7.69,1.57e-20,1.990483311,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Nodulin-like;; Major Facilitator Superfamily","--","Monocarboxylate transporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19397 PE=3 SV=1","S","Function unknown","protein NUCLEAR FUSION DEFECTIVE 4 [Sesamum indicum]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c60348.graph_c0",9,2.63,5,1.36,5,1.48,27,8.38,33,11.36,18,5.61,0.00510302,1.581643547,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107497.graph_c2",10352,454.99,10928,455.25,10445,475.05,6204,272.59,5319,269.19,5858,251.59,1.54e-114,-1.190489334,"down","[G]","Carbohydrate transport and metabolism ","Molecular Function: triose-phosphate isomerase activity (GO:0004807);; Molecular Function: copper ion binding (GO:0005507);; Cellular Component: cell wall (GO:0005618);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: vacuolar membrane (GO:0005774);; Cellular Component: cytosol (GO:0005829);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: glycolytic process (GO:0006096);; Cellular Component: plasmodesma (GO:0009506);; Cellular Component: chloroplast stroma (GO:0009570);; Biological Process: response to zinc ion (GO:0010043);; Biological Process: cellular carbohydrate metabolic process (GO:0044262);; Biological Process: response to cadmium ion (GO:0046686);; Cellular Component: apoplast (GO:0048046);; ","K01803|8.2e-111|oeu:111397483|K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] | (RefSeq) triosephosphate isomerase, cytosolic","[G]","Carbohydrate transport and metabolism ","Triosephosphate isomerase","Triosephosphate isomerase, cytosolic OS=Petunia hybrida OX=4102 GN=TPIP1 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00029890001 PE=3 SV=1","G","Carbohydrate transport and metabolism","triosephosphate isomerase, cytosolic [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; cellular component: membrane (GO:0016020);; cellular component: organelle part (GO:0044422);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; biological process: response to stimulus (GO:0050896);; cellular component: extracellular region (GO:0005576)","Glycolysis / Gluconeogenesis (ko00010);; Fructose and mannose metabolism (ko00051);; Inositol phosphate metabolism (ko00562);; Carbon fixation in photosynthetic organisms (ko00710);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230)"]
["c110714.graph_c0",107,3.05,123,3.44,127,3.93,351,10.32,340,11.43,293,8.82,1.13e-11,1.13656815,"up","[T]","Signal transduction mechanisms ","Molecular Function: voltage-gated potassium channel activity (GO:0005249);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: regulation of ion transmembrane transport (GO:0034765);; ","K21867|0.0e+00|oeu:111387727|K21867 potassium channel | (RefSeq) potassium channel AKT2/3 isoform X1","[PT]","--","Ankyrin repeats (3 copies);; KHA, dimerisation domain of potassium ion channel;; Ankyrin repeats (many copies);; Ankyrin repeats (many copies);; Cyclic nucleotide-binding domain;; Ankyrin repeat;; Ankyrin repeat;; Ion channel;; Ion transport protein;; U-box domain","Potassium channel AKT2/3 OS=Arabidopsis thaliana OX=3702 GN=AKT2 PE=1 SV=1","Putative potassium channel AKT2/3 OS=Davidia involucrata OX=16924 GN=Din_006707 PE=3 SV=1","--","--","potassium channel AKT2/3 isoform X2 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c97099.graph_c0",27578,1688.18,30255,1749.28,27109,1707.08,6125,383.46,4684,335.95,5629,350.48,0,-2.691687167,"down","--","--","Molecular Function: UDP-glycosyltransferase activity (GO:0008194);; ","K22794|1.3e-170|jre:109004406|K22794 flavonol-3-O-glucoside/galactoside glucosyltransferase [EC:2.4.1.239 2.4.1.-] | (RefSeq) cyanidin 3-O-galactoside 2''-O-xylosyltransferase FGGT1","[GC]","--","UDP-glucoronosyl and UDP-glucosyl transferase","Cyanidin 3-O-galactoside 2''-O-xylosyltransferase FGGT1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=F3GGT1 PE=1 SV=2","Glycosyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11732 PE=3 SV=1","--","--","anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Sesamum indicum]","molecular function: catalytic activity (GO:0003824)","Flavone and flavonol biosynthesis (ko00944)"]
["c113169.graph_c2",11992,159.49,12527,167.4,11869,166,3306,62.82,2884,59.26,3394,65,0,-2.248203512,"down","[R]","General function prediction only ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: ATP binding (GO:0005524);; Biological Process: protein phosphorylation (GO:0006468);; Cellular Component: integral component of membrane (GO:0016021);; ","K24104|4.5e-75|thj:104799061|K24104 GPN-loop GTPase | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104799061","--","--","Salt stress response/antifungal;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain","Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3","Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_010330 PE=4 SV=1","T","Signal transduction mechanisms","cysteine-rich receptor-like protein kinase 25 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c113427.graph_c0",35,1.61,31,1.4,31,1.44,3,0.19,3,0.26,2,0.11,9.29e-10,-3.514766619,"down","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: recognition of pollen (GO:0048544);; ","K24104|1.3e-26|thj:104799061|K24104 GPN-loop GTPase | (RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104799061","--","--","S-locus glycoprotein domain;; PAN-like domain;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain","G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4","Receptor-like serine/threonine-protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13393 PE=3 SV=1","T","Signal transduction mechanisms","G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: reproduction (GO:0000003);; biological process: reproductive process (GO:0022414);; biological process: multicellular organismal process (GO:0032501);; biological process: single-organism process (GO:0044699);; biological process: multi-organism process (GO:0051704)","--"]
["c111426.graph_c0",16,0.38,29,1.08,18,0.47,48,1.77,54,1.59,59,1.43,0.007081926,1.000803559,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K02184|2.8e-60|ini:109182789|K02184 formin 2 | (RefSeq) formin-like protein 1","[TZ]","--","Formin Homology 2 Domain","Formin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=FH4 PE=1 SV=2","Formin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09302 PE=3 SV=1","--","--","formin-like protein 4 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c107384.graph_c0",146,17.02,164,18.88,148,19.79,708,74.81,927,111.51,1049,107.28,1.48e-56,2.217645306,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At3g53590 OS=Arabidopsis thaliana OX=3702 GN=At3g53590 PE=1 SV=2","probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 OS=Juglans regia OX=51240 GN=LOC109002406 PE=3 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c110987.graph_c0",143,8.43,125,7.27,118,7.16,496,34.17,486,40.01,545,34.42,1.08e-34,1.65318877,"up","--","--","Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742);; Molecular Function: protein transmembrane transporter activity (GO:0008320);; Biological Process: protein import into mitochondrial matrix (GO:0030150);; ","K11518|1.3e-84|oeu:111393720|K11518 mitochondrial import receptor subunit TOM40 | (RefSeq) mitochondrial import receptor subunit TOM40-1-like","[U]","Intracellular trafficking, secretion, and vesicular transport ","Eukaryotic porin;; Eukaryotic porin","Mitochondrial import receptor subunit TOM40-1 OS=Arabidopsis thaliana OX=3702 GN=TOM40-1 PE=1 SV=3","mitochondrial import receptor subunit TOM40-1-like OS=Nicotiana tabacum OX=4097 GN=LOC107806567 PE=3 SV=1","U","Intracellular trafficking, secretion, and vesicular transport","mitochondrial import receptor subunit TOM40-1-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c112764.graph_c0",238,19.25,281,26.19,262,23.55,77,8.17,46,4.51,61,5.46,4.21e-37,-2.388527023,"down","--","--","Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity (GO:0004514);; Molecular Function: nicotinate phosphoribosyltransferase activity (GO:0004516);; Biological Process: NAD biosynthetic process (GO:0009435);; ","K00763|2.8e-19|oeu:111400216|K00763 nicotinate phosphoribosyltransferase [EC:6.3.4.21] | (RefSeq) nicotinate phosphoribosyltransferase 1-like","[H]","Coenzyme transport and metabolism ","--","Nicotinate phosphoribosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=NAPRT2 PE=2 SV=1","Nicotinate phosphoribosyltransferase OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_025180 PE=3 SV=1","H","Coenzyme transport and metabolism","nicotinate phosphoribosyltransferase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699)","Nicotinate and nicotinamide metabolism (ko00760)"]
["c117818.graph_c0",87,2.89,123,3.9,75,2.58,242,8.68,255,10.2,282,9.1,9.28e-10,1.124241168,"up","--","--","--","K22395|2.3e-13|oeu:111392060|K22395 cinnamyl-alcohol dehydrogenase [EC:1.1.1.195] | (RefSeq) berberine bridge enzyme-like 13","--","--","--","--","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20550 PE=4 SV=1","--","--","uncharacterized protein LOC112092461 [Morus notabilis]","--","Phenylpropanoid biosynthesis (ko00940)"]
["c101863.graph_c0",248,21.55,232,18.78,223,19.68,824,72.68,925,93.21,1022,90.26,3.57e-49,1.651203929,"up","[J]","Translation, ribosomal structure and biogenesis ","Molecular Function: structural constituent of ribosome (GO:0003735);; Biological Process: translation (GO:0006412);; Cellular Component: large ribosomal subunit (GO:0015934);; ","K02880|2.7e-77|oeu:111403400|K02880 large subunit ribosomal protein L17e | (RefSeq) 60S ribosomal protein L17-2","[J]","Translation, ribosomal structure and biogenesis ","--","60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1","60S ribosomal protein like (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08254 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L17-2 [Olea europaea var. sylvestris]","molecular function: structural molecule activity (GO:0005198);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464)","Ribosome (ko03010)"]
["c109161.graph_c0",59,1.63,57,1.6,33,1.04,323,9.97,343,12.45,393,13.2,1.84e-38,2.485068878,"up","[L]","Replication, recombination and repair ","Molecular Function: chromatin binding (GO:0003682);; Molecular Function: DNA (cytosine-5-)-methyltransferase activity (GO:0003886);; Cellular Component: nucleus (GO:0005634);; ","K00558|2.4e-289|oeu:111405845|K00558 DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] | (RefSeq) DNA (cytosine-5)-methyltransferase CMT3 isoform X1","--","--","C-5 cytosine-specific DNA methylase;; Chromo (CHRromatin Organisation MOdifier) domain","DNA (cytosine-5)-methyltransferase 1 OS=Zea mays OX=4577 GN=MET2A PE=1 SV=1","DNA (Cytosine-5-)-methyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16446 PE=3 SV=1","B","Chromatin structure and dynamics","DNA (cytosine-5)-methyltransferase CMT3 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","Cysteine and methionine metabolism (ko00270)"]
["c114792.graph_c1",923,13.29,891,12.15,755,11.26,2429,35.03,2013,33.28,2457,35.53,1.21e-49,1.099565642,"up","[H]","Coenzyme transport and metabolism ","Biological Process: chlorophyll biosynthetic process (GO:0015995);; Molecular Function: magnesium chelatase activity (GO:0016851);; ","K03403|0.0e+00|oeu:111375026|K03403 magnesium chelatase subunit H [EC:6.6.1.1] | (RefSeq) magnesium-chelatase subunit ChlH, chloroplastic","--","--","CobN/Magnesium Chelatase;; Domain of unknown function (DUF3479);; CobN/Magnesium Chelatase","Magnesium-chelatase subunit ChlH, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHLH PE=1 SV=1","Magnesium chelatase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02695 PE=3 SV=1","H","Coenzyme transport and metabolism","magnesium-chelatase subunit ChlH, chloroplastic [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Porphyrin and chlorophyll metabolism (ko00860)"]
["c117043.graph_c5",154,7.98,105,4.5,97,5.25,57,4.12,47,3.51,51,3.21,2.12e-09,-1.496047334,"down","--","--","Molecular Function: protein binding (GO:0005515);; ","--","--","--","F-box domain","F-box protein At1g80960 OS=Arabidopsis thaliana OX=3702 GN=At1g80960 PE=2 SV=3","F-box domain-containing protein/FBD domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04393 PE=4 SV=1","S","Function unknown","F-box protein At1g80960-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c115589.graph_c0",121,2.4,134,2.51,109,2.25,483,10.72,495,12.36,597,13.11,2.39e-38,1.781164864,"up","--","--","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K16224|1.4e-101|bna:106356473|K16224 senescence-induced receptor-like serine/threonine-protein kinase | (RefSeq) senescence-induced receptor-like serine/threonine-protein kinase","--","--","Malectin-like domain;; Protein tyrosine and serine/threonine kinase;; Protein kinase domain;; Leucine Rich repeats (2 copies);; Leucine rich repeat","Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana OX=3702 GN=At1g67720 PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14081 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c106477.graph_c0",65,2.76,88,3.48,63,2.72,497,20.07,373,17.18,489,19.46,6.05e-45,2.311091497,"up","--","--","Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; ","K08332|1.0e-07|cmo:103484819|K08332 vacuolar protein 8 | (RefSeq) U-box domain-containing protein 4","[S]","Function unknown ","Armadillo/beta-catenin-like repeat;; HEAT repeats","U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3","Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a006026mg PE=4 SV=1","S","Function unknown","U-box domain-containing protein 4-like isoform X2 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c107335.graph_c1",1,0.21,0,0,2,0.43,68,7.87,68,9,83,9.65,3.8e-15,4.97508655,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c110230.graph_c1",11,0.85,3,0.17,29,1.79,149,10.58,130,11.27,200,14.94,0.000217295,2.627563788,"up","[GEPR]","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K08176|3.7e-238|oeu:111378674|K08176 MFS transporter, PHS family, inorganic phosphate transporter | (RefSeq) probable inorganic phosphate transporter 1-9","[P]","Inorganic ion transport and metabolism ","Sugar (and other) transporter;; Major Facilitator Superfamily","Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana OX=3702 GN=PHT1-9 PE=2 SV=1","Putative inorganic phosphate transporter 1-9 OS=Davidia involucrata OX=16924 GN=Din_036165 PE=3 SV=1","P","Inorganic ion transport and metabolism","probable inorganic phosphate transporter 1-9 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c95789.graph_c1",55,3.07,59,3.11,45,2.58,219,12.5,179,11.71,195,11.07,6.93e-14,1.560052491,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Plant protein of unknown function","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03812 PE=4 SV=1","S","Function unknown","hypothetical protein CDL12_03812 [Handroanthus impetiginosus]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c111037.graph_c0",780,33.8,974,39.97,820,37.07,3752,166.19,3030,153.55,3459,154.43,9.8e-103,1.66720839,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","--","--","--","Peptidase inhibitor I9","Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana OX=3702 GN=SBT3.6 PE=2 SV=1","Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036887001 PE=3 SV=1","G","Carbohydrate transport and metabolism","subtilisin-like protease SBT3.5 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c94756.graph_c0",26,2.07,33,2.48,23,1.88,92,7.59,75,7.02,102,8.31,4.51e-06,1.356853497,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_00529 PE=4 SV=1","--","--","proline-rich receptor-like protein kinase PERK12 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c98449.graph_c0",39,4.86,25,2.81,21,1.86,13,1.59,15,1.87,14,1.05,0.006399843,-1.25928752,"down","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein kinase activity (GO:0004672);; Molecular Function: calcium ion binding (GO:0005509);; Molecular Function: ATP binding (GO:0005524);; Molecular Function: polysaccharide binding (GO:0030247);; ","K23544|2.2e-130|brp:103842861|K23544 serine incorporator 1/3 | (RefSeq) serine incorporator 3","--","--","Protein kinase domain;; Protein tyrosine and serine/threonine kinase;; Wall-associated receptor kinase galacturonan-binding;; EGF-like domain;; Calcium-binding EGF domain;; Wall-associated kinase","Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1","Wall-associated receptor kinase 3-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_35602 PE=4 SV=1","T","Signal transduction mechanisms","putative wall-associated receptor kinase-like 16 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c113093.graph_c2",258,19.03,292,20.87,282,23.6,1097,82.64,894,76.85,1064,80.8,3.62e-53,1.546783426,"up","--","--","--","--","--","--","--","--","Growth hormone-releasing hormone receptor like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24579 PE=4 SV=1","--","--","extensin-like [Olea europaea var. sylvestris]","--","--"]
["c92619.graph_c0",5,0.28,0,0,2,0.11,29,1.63,33,2.15,21,1.17,1.61e-05,2.81799319,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; ","K14638|3.6e-112|lsv:111891766|K14638 solute carrier family 15 (peptide/histidine transporter), member 3/4 | (RefSeq) protein NRT1/ PTR FAMILY 3.1-like","[E]","Amino acid transport and metabolism ","POT family","Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana OX=3702 GN=NPF3.1 PE=2 SV=1","H+/oligopeptide symporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07672 PE=3 SV=1","E","Amino acid transport and metabolism","protein NRT1/ PTR FAMILY 3.1-like [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c92126.graph_c0",2,0.18,4,0.35,5,0.45,40,3.72,40,4.21,46,4.26,5.32e-08,2.917406601,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity (GO:0016491);; ","K08360|3.8e-71|oeu:111399160|K08360 cytochrome b-561 [EC:7.2.1.3] | (RefSeq) probable transmembrane ascorbate ferrireductase 3","[C]","Energy production and conversion ","Eukaryotic cytochrome b561","Probable transmembrane ascorbate ferrireductase 3 OS=Arabidopsis thaliana OX=3702 GN=CYB561C PE=2 SV=1","Cytochrome B561 family protein OS=Striga asiatica OX=4170 GN=STAS_13544 PE=4 SV=1","C","Energy production and conversion","probable transmembrane ascorbate ferrireductase 3 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c114063.graph_c0",21,1.14,13,0.67,16,0.89,147,8.15,116,7.61,172,10.33,4.49e-20,2.720058195,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA-DNA hybrid ribonuclease activity (GO:0004523);; Biological Process: DNA integration (GO:0015074);; ","K07195|7.1e-30|qsu:112020577|K07195 exocyst complex component 7 | (RefSeq) exocyst complex component EXO70A1-like","[R]","General function prediction only ","Integrase core domain;; Integrase zinc binding domain","--","Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2477 PE=4 SV=1","E","Amino acid transport and metabolism","uncharacterized protein K02A2.6-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c101975.graph_c0",9,0.57,6,0.39,11,0.51,79,3.26,72,3.11,68,3.17,4.67e-11,2.626676713,"up","--","--","Molecular Function: calcium ion binding (GO:0005509);; Biological Process: mitochondrial calcium ion transmembrane transport (GO:0006851);; ","K22827|3.3e-190|sind:105166421|K22827 calcium uptake protein 1, mitochondrial | (RefSeq) calcium uptake protein, mitochondrial","[P]","Inorganic ion transport and metabolism ","EF hand;; EF-hand domain pair;; EF-hand domain;; EF-hand domain pair;; EF hand","Calcium uptake protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MICU PE=2 SV=1","Ca2+ binding protein, contains EF-hand motif OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07000 PE=4 SV=1","P","Inorganic ion transport and metabolism","Ca2+ binding protein, contains EF-hand motif [Handroanthus impetiginosus]","molecular function: binding (GO:0005488);; biological process: localization (GO:0051179)","--"]
["c107115.graph_c2",29,1.53,39,1.96,51,2.92,177,8.86,133,6.98,208,10.01,1.81e-12,1.754799004,"up","--","--","--","--","--","--","Protein of unknown function (DUF1997)","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12032 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111381513 isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c115931.graph_c0",18,0.82,15,0.73,24,1.59,452,16.05,419,17.14,528,18.75,5.78e-77,4.225686973,"up","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28263 PE=4 SV=1","--","--","uncharacterized protein LOC111367676 [Olea europaea var. sylvestris]","--","--"]
["c107030.graph_c0",49,4.57,43,3.78,33,3.16,16,1.53,11,1.2,22,2.09,5.09e-05,-1.609714343,"down","--","--","--","K23978|6.4e-08|oeu:111405291|K23978 isoamyl acetate esterase [EC:3.1.1.112] | (RefSeq) GDSL esterase/lipase At5g62930-like","--","--","--","--","--","--","--","GDSL esterase/lipase At5g62930-like [Olea europaea var. sylvestris]","--","--"]
["c109410.graph_c0",68,3.32,38,1.26,47,1.7,227,4.46,207,4.93,223,4.14,7.55e-16,1.7552028,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: serine-type endopeptidase activity (GO:0004252);; ","K13124|1.3e-13|lsv:111889439|K13124 mitogen-activated protein kinase organizer 1 | (RefSeq) uncharacterized WD repeat-containing protein C713.05-like","--","--","Subtilase family;; Fibronectin type-III domain;; Peptidase inhibitor I9","Subtilisin-like protease SBT4.15 OS=Arabidopsis thaliana OX=3702 GN=SBT4.15 PE=3 SV=1","Cucumisin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10530 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","subtilisin-like protease SBT4.15 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c112833.graph_c0",124,4.19,148,5.06,114,4.17,780,27.59,765,31.09,935,33.75,1.18e-81,2.350773382,"up","--","--","Biological Process: cytoskeleton organization (GO:0007010);; Molecular Function: microtubule binding (GO:0008017);; ","--","--","--","Microtubule-associated protein 70","Microtubule-associated protein 70-2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAP70.2 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_017556 PE=3 SV=1","S","Function unknown","microtubule-associated protein 70-1-like [Olea europaea var. sylvestris]","biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488)","--"]
["c91106.graph_c0",1283,73.32,1303,70.45,1287,75.72,579,33.84,494,33.13,561,32.7,4.76e-84,-1.56681578,"down","--","--","--","--","--","--","--","--","uncharacterized protein LOC107804369 OS=Nicotiana tabacum OX=4097 GN=LOC107804369 PE=4 SV=1","--","--","uncharacterized protein LOC111372044 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c107330.graph_c1",95,6.77,95,5.53,92,5.63,45,3,42,3.45,49,3.75,5.64e-08,-1.353541961,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g061762 PE=4 SV=1","--","--","glutamic acid-rich protein-like isoform X2 [Olea europaea var. sylvestris]","--","--"]
["c94225.graph_c0",168,23.67,127,16.76,131,18.9,1815,260.64,1737,285.67,1713,243.53,2.12e-191,3.296395958,"up","--","--","--","--","--","--","--","--","--","--","--","non-specific lipid transfer protein GPI-anchored 1-like [Olea europaea var. sylvestris]","--","--"]
["c100000.graph_c0",45,1.67,39,1.35,42,1.41,239,8.38,214,8.87,243,8.93,1.36e-24,2.115986911,"up","--","--","Molecular Function: ATP transmembrane transporter activity (GO:0005347);; Cellular Component: integral component of membrane (GO:0016021);; ","K14684|3.3e-45|egu:105040440|K14684 solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 | (RefSeq) probable mitochondrial adenine nucleotide transporter BTL3 isoform X1","[C]","Energy production and conversion ","Mitochondrial carrier protein;; Mitochondrial carrier protein","Probable mitochondrial adenine nucleotide transporter BTL3 OS=Arabidopsis thaliana OX=3702 GN=At5g64970 PE=2 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_035922 PE=3 SV=1","C","Energy production and conversion","probable mitochondrial adenine nucleotide transporter BTL3 isoform X2 [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c106777.graph_c3",20,1.46,33,3.02,35,3.49,100,7.92,121,9.19,137,8.77,4.91e-09,1.662996629,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: methylmalonate-semialdehyde dehydrogenase (acylating) activity (GO:0004491);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K01147|3.6e-21|vra:106774033|K01147 exoribonuclease II [EC:3.1.13.1] | (RefSeq) uncharacterized protein LOC106774033","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_038328 PE=4 SV=1","O","Posttranslational modification, protein turnover, chaperones","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987)","--"]
["c100429.graph_c0",542,12.53,588,12.88,558,13.3,228,5.39,187,5.06,212,4.95,6.27e-52,-1.746318802,"down","[T]","Signal transduction mechanisms ","Molecular Function: solute:proton antiporter activity (GO:0015299);; Cellular Component: integral component of membrane (GO:0016021);; ","--","[P]","Inorganic ion transport and metabolism ","Sodium/hydrogen exchanger family","Cation/H(+) antiporter 18 OS=Arabidopsis thaliana OX=3702 GN=CHX18 PE=2 SV=1","Putative K+/H+-antiporter OS=Handroanthus impetiginosus OX=429701 GN=CDL12_14099 PE=4 SV=1","P","Inorganic ion transport and metabolism","cation/H(+) antiporter 18-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108058.graph_c0",2654,103.73,2724,100.46,2512,100.38,1446,57.07,1447,65.6,1647,64.62,5.48e-76,-1.119014712,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: cysteine-type peptidase activity (GO:0008234);; ","K01373|4.1e-94|oeu:111394575|K01373 cathepsin F [EC:3.4.22.41] | (RefSeq) probable cysteine protease RD19B","[O]","Posttranslational modification, protein turnover, chaperones ","Cathepsin propeptide inhibitor domain (I29);; Papain family cysteine protease","Probable cysteine protease RD19B OS=Arabidopsis thaliana OX=3702 GN=RD19B PE=2 SV=2","cysteine proteinase OS=Juglans regia OX=51240 GN=LOC109005740 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","probable cysteine protease RD19B [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","Plant-pathogen interaction (ko04626)"]
["c109303.graph_c0",18,0.73,20,0.69,35,1.34,115,4.69,137,6.59,112,4.78,1.46e-10,1.946367081,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: AT DNA binding (GO:0003680);; Cellular Component: nucleus (GO:0005634);; ","--","--","--","AT hook motif;; Plants and Prokaryotes Conserved (PCC) domain","AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1","AT-hook motif nuclear-localized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20641 PE=4 SV=1","K","Transcription","AT-hook motif nuclear-localized protein 7-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c83899.graph_c0",18,1.79,25,2.37,5,0.47,76,7.95,61,7.77,51,5.49,0.000116544,1.592035507,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c82807.graph_c0",154,8.95,203,11.15,179,10.71,664,39.54,480,32.7,599,35.43,6.91e-24,1.368481066,"up","[I]","Lipid transport and metabolism ","Molecular Function: methyl indole-3-acetate esterase activity (GO:0080030);; ","K22097|2.2e-57|psom:113323289|K22097 3-O-acetylpapaveroxine carboxylesterase [EC:3.1.1.105] | (RefSeq) carboxylesterase 1-like","[V]","Defense mechanisms ","alpha/beta hydrolase fold;; Carboxylesterase family;; Steryl acetyl hydrolase","Carboxylesterase 1 OS=Actinidia eriantha OX=165200 GN=CXE1 PE=1 SV=1","Arylacetamide deacetylase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_18725 PE=4 SV=1","V","Defense mechanisms","carboxylesterase 1-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824)","Isoquinoline alkaloid biosynthesis (ko00950)"]
["c87975.graph_c0",95,12.42,112,13.76,86,11.94,61,8.18,45,7.06,65,8.64,8.02e-06,-1.084954188,"down","--","--","--","--","--","--","--","--","--","--","--","heavy metal-associated isoprenylated plant protein 6-like [Olea europaea var. sylvestris]","--","--"]
["c114780.graph_c0",30,1.83,27,0.48,24,0.68,89,1.75,114,2.52,106,3.87,5.32e-08,1.579018298,"up","--","--","Biological Process: regulation of circadian rhythm (GO:0042752);; ","--","--","--","--","Protein TIME FOR COFFEE OS=Arabidopsis thaliana OX=3702 GN=TIC PE=1 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_09077 PE=4 SV=1","S","Function unknown","LOW QUALITY PROTEIN: protein TIME FOR COFFEE [Sesamum indicum]","biological process: biological regulation (GO:0065007)","--"]
["c87259.graph_c0",343,50.29,329,45.3,284,42.74,166,24.94,179,30.92,171,25.49,4e-17,-1.200851939,"down","--","--","Molecular Function: phosphatidylinositol phospholipase C activity (GO:0004435);; Biological Process: lipid catabolic process (GO:0016042);; Biological Process: intracellular signal transduction (GO:0035556);; ","K05857|2.8e-98|oeu:111403077|K05857 phosphatidylinositol phospholipase C, delta [EC:3.1.4.11] | (RefSeq) phosphoinositide phospholipase C 2-like","[T]","Signal transduction mechanisms ","Phosphatidylinositol-specific phospholipase C, Y domain;; Phosphatidylinositol-specific phospholipase C, X domain","Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana OX=3702 GN=PLC2 PE=1 SV=1","Phosphoinositide phospholipase C OS=Davidia involucrata OX=16924 GN=Din_016200 PE=4 SV=1","I","Lipid transport and metabolism","phosphoinositide phospholipase C 2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007)","Inositol phosphate metabolism (ko00562);; Phosphatidylinositol signaling system (ko04070)"]
["c97083.graph_c0",3,0.47,6,0.88,10,1.6,42,6.71,40,7.61,79,12.64,1.33e-07,2.552930786,"up","--","--","Cellular Component: fibrillar center (GO:0001650);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: nucleus (GO:0005634);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: nucleolus (GO:0005730);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Biological Process: regulation of transcription by RNA polymerase I (GO:0006356);; Biological Process: rRNA processing (GO:0006364);; Biological Process: RNA processing (GO:0006396);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: regulation of biosynthetic process (GO:0009889);; Biological Process: positive regulation of biosynthetic process (GO:0009891);; Biological Process: positive regulation of metabolic process (GO:0009893);; Biological Process: cellular process (GO:0009987);; Biological Process: gene expression (GO:0010467);; Biological Process: regulation of gene expression (GO:0010468);; Biological Process: regulation of macromolecule biosynthetic process (GO:0010556);; Biological Process: positive regulation of macromolecule biosynthetic process (GO:0010557);; Biological Process: positive regulation of macromolecule metabolic process (GO:0010604);; Biological Process: positive regulation of gene expression (GO:0010628);; Biological Process: RNA metabolic process (GO:0016070);; Biological Process: rRNA metabolic process (GO:0016072);; Biological Process: regulation of nucleobase-containing compound metabolic process (GO:0019219);; Biological Process: regulation of metabolic process (GO:0019222);; Biological Process: ribonucleoprotein complex biogenesis (GO:0022613);; Biological Process: regulation of cellular metabolic process (GO:0031323);; Biological Process: positive regulation of cellular metabolic process (GO:0031325);; Biological Process: regulation of cellular biosynthetic process (GO:0031326);; Biological Process: positive regulation of cellular biosynthetic process (GO:0031328);; Cellular Component: membrane-enclosed lumen (GO:0031974);; Cellular Component: nuclear lumen (GO:0031981);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: ncRNA metabolic process (GO:0034660);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: non-membrane-bounded organelle (GO:0043228);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: intracellular non-membrane-bounded organelle (GO:0043232);; Cellular Component: organelle lumen (GO:0043233);; Biological Process: cellular component biogenesis (GO:0044085);; Biological Process: regulation of cellular component biogenesis (GO:0044087);; Biological Process: positive regulation of cellular component biogenesis (GO:0044089);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete organelle part (GO:0044422);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete nuclear part (GO:0044428);; Cellular Component: obsolete intracellular organelle part (GO:0044446);; Cellular Component: obsolete nucleolar part (GO:0044452);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: positive regulation of transcription, DNA-templated (GO:0045893);; Biological Process: positive regulation of nucleobase-containing compound metabolic process (GO:0045935);; Biological Process: positive regulation of transcription by RNA polymerase I (GO:0045943);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: positive regulation of biological process (GO:0048518);; Biological Process: positive regulation of cellular process (GO:0048522);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: regulation of nitrogen compound metabolic process (GO:0051171);; Biological Process: positive regulation of nitrogen compound metabolic process (GO:0051173);; Biological Process: regulation of RNA metabolic process (GO:0051252);; Biological Process: positive regulation of RNA metabolic process (GO:0051254);; Biological Process: regulation of macromolecule metabolic process (GO:0060255);; Biological Process: biological regulation (GO:0065007);; Cellular Component: intracellular organelle lumen (GO:0070013);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: cellular component organization or biogenesis (GO:0071840);; Biological Process: regulation of primary metabolic process (GO:0080090);; Biological Process: regulation of ribosome biogenesis (GO:0090069);; Biological Process: positive regulation of ribosome biogenesis (GO:0090070);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Biological Process: positive regulation of RNA biosynthetic process (GO:1902680);; Biological Process: regulation of nucleic acid-templated transcription (GO:1903506);; Biological Process: positive regulation of nucleic acid-templated transcription (GO:1903508);; Biological Process: regulation of cellular macromolecule biosynthetic process (GO:2000112);; Biological Process: regulation of rRNA processing (GO:2000232);; Biological Process: positive regulation of rRNA processing (GO:2000234);; Biological Process: regulation of RNA biosynthetic process (GO:2001141);; ","K14546|6.5e-44|oeu:111393397|K14546 U3 small nucleolar RNA-associated protein 5 | (RefSeq) WD repeat-containing protein 43","[R]","General function prediction only ","--","--","WD40 repeat-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28164 PE=4 SV=1","S","Function unknown","WD repeat-containing protein 43 [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: biological regulation (GO:0065007);; biological process: cellular component organization or biogenesis (GO:0071840)","Ribosome biogenesis in eukaryotes (ko03008)"]
["c38367.graph_c0",49,11.23,25,5.35,40,9.33,3,0.7,6,1.62,3,0.7,9.75e-10,-3.261908852,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c106890.graph_c0",72,2.97,83,3.44,77,3.18,32,1.87,28,1.86,23,1.37,2.87e-09,-1.758538783,"down","[G]","Carbohydrate transport and metabolism ","--","--","--","--","Major royal jelly protein","--","--","G","Carbohydrate transport and metabolism","hypothetical protein CERSUDRAFT_119203 [Gelatoporia subvermispora B]","--","--"]
["c117192.graph_c0",181,3.87,243,7.06,212,5.96,21,0.64,29,0.49,32,0.77,4.71e-43,-3.226075336,"down","--","--","--","K09571|1.1e-30|qsu:112039090|K09571 FK506-binding protein 4/5 [EC:5.2.1.8] | (RefSeq) LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase FKBP65-like","[R]","General function prediction only ","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_469 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","--","--"]
["c85423.graph_c0",15,1.82,21,2.4,19,2.36,56,6.96,37,5.27,67,8.27,0.002416112,1.15966352,"up","--","--","Molecular Function: serine-type carboxypeptidase activity (GO:0004185);; ","K16296|1.7e-38|oeu:111378831|K16296 serine carboxypeptidase-like clade I [EC:3.4.16.-] | (RefSeq) serine carboxypeptidase-like 18","[OE]","--","Serine carboxypeptidase","Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana OX=3702 GN=SCPL6 PE=2 SV=2","Serine carboxypeptidases (Lysosomal cathepsin A) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08963 PE=3 SV=1","--","--","serine carboxypeptidase-like 18 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c116360.graph_c0",44,2.88,58,3.59,41,2.7,145,11.23,137,10.97,136,9.35,2.61e-07,1.212873602,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c112321.graph_c1",118,1.99,117,1.87,113,1.96,5,0.09,9,0.18,7,0.12,1.67e-30,-4.198911272,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Cellular Component: nucleus (GO:0005634);; Biological Process: DNA integration (GO:0015074);; ","K12349|5.1e-105|ccaj:109806181|K12349 neutral ceramidase [EC:3.5.1.23] | (RefSeq) neutral ceramidase-like","[R]","General function prediction only ","RNase H-like domain found in reverse transcriptase;; Reverse transcriptase (RNA-dependent DNA polymerase);; RNase H-like domain found in reverse transcriptase;; Integrase zinc binding domain;; Retroviral aspartyl protease","Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1","Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold359G00150 PE=4 SV=1","I","Lipid transport and metabolism","Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","Sphingolipid metabolism (ko00600)"]
["c103701.graph_c1",105,3.41,73,2.32,97,3.16,394,12.74,334,12.16,357,11.48,3.97e-22,1.641371414,"up","--","--","Cellular Component: cytoplasm (GO:0005737);; Biological Process: fucose metabolic process (GO:0006004);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757);; ","K23280|3.7e-235|oeu:111397042|K23280 rhamnogalacturonan I rhamnosyltransferase [EC:2.4.1.351] | (RefSeq) O-fucosyltransferase 34-like","--","--","GDP-fucose protein O-fucosyltransferase","Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT1 PE=1 SV=1","O-fucosyltransferase family protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004661mg PE=3 SV=1","G","Carbohydrate transport and metabolism","O-fucosyltransferase 34-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824)","--"]
["c103098.graph_c0",2132,193.56,2136,183.39,1934,178.63,925,77.35,884,84.5,985,79.26,8.11e-112,-1.470825867,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: mitochondrial matrix (GO:0005759);; Biological Process: iron-sulfur cluster assembly (GO:0016226);; Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537);; ","K22068|7.9e-33|oeu:111402209|K22068 iron-sulfur cluster assembly enzyme ISCU, mitochondrial | (RefSeq) iron-sulfur cluster assembly protein 1-like","[C]","Energy production and conversion ","NifU-like N terminal domain","Iron-sulfur cluster assembly protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ISU1 PE=2 SV=1","Iron-sulfur cluster assembly protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_19552 PE=3 SV=1","C","Energy production and conversion","iron-sulfur cluster assembly protein 1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c88394.graph_c0",152,10.4,117,7.56,127,8.94,70,4.9,78,6.26,77,5.36,2.2e-07,-1.123292674,"down","--","--","--","--","--","--","--","--","uncharacterized protein LOC107824057 OS=Nicotiana tabacum OX=4097 GN=LOC107824057 PE=4 SV=1","S","Function unknown","protodermal factor 1 [Olea europaea var. sylvestris]","--","--"]
["c95473.graph_c0",64,2.34,85,2.91,77,2.8,299,10.98,282,11.56,329,11.69,2.68e-22,1.672302103,"up","[V]","Defense mechanisms ","Molecular Function: antiporter activity (GO:0015297);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: xenobiotic transmembrane transporter activity (GO:0042910);; ","K03327|8.5e-95|oeu:111396265|K03327 multidrug resistance protein, MATE family | (RefSeq) protein DETOXIFICATION 16-like","[R]","General function prediction only ","MatE;; MatE","Protein DETOXIFICATION 16 OS=Arabidopsis thaliana OX=3702 GN=DTX16 PE=2 SV=1","Protein DETOXIFICATION OS=Rehmannia glutinosa OX=99300 PE=2 SV=1","V","Defense mechanisms","protein DETOXIFICATION 16-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: single-organism process (GO:0044699)","--"]
["c103380.graph_c0",13,3.58,12,3.37,11,2.98,45,12.78,43,13.6,40,11.52,0.000680224,1.439549723,"up","--","--","Cellular Component: mitochondrial outer membrane translocase complex (GO:0005742);; ","--","--","--","--","Mitochondrial import receptor subunit TOM5 homolog OS=Arabidopsis thaliana OX=3702 GN=TOM5 PE=1 SV=3","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10934 PE=4 SV=1","S","Function unknown","mitochondrial import receptor subunit TOM5 homolog [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: membrane part (GO:0044425);; cellular component: cell part (GO:0044464)","--"]
["c113827.graph_c0",238,17.17,312,18.95,259,16.69,1320,66.77,1325,78.45,1476,75.44,4.81e-95,2.02255909,"up","--","--","Molecular Function: acetylglucosaminyltransferase activity (GO:0008375);; Cellular Component: membrane (GO:0016020);; ","--","--","--","Core-2/I-Branching enzyme","Glycosyltransferase BC10 OS=Oryza sativa subsp. japonica OX=39947 GN=BC10 PE=1 SV=1","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_001785 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111374426 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: membrane (GO:0016020)","--"]
["c111001.graph_c4",68,6.31,79,6.89,66,6.27,19,1.8,12,1.3,20,1.88,2.63e-12,-2.316716288,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c99049.graph_c0",314,48.55,344,50.28,296,47.43,842,132.1,809,151.52,927,145.77,3.1e-30,1.109148459,"up","--","--","Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; Cellular Component: integral component of membrane (GO:0016021);; ","K07374|4.6e-95|oeu:111379087|K07374 tubulin alpha | (RefSeq) tubulin alpha-3 chain-like","[Z]","Cytoskeleton ","Tubulin/FtsZ family, GTPase domain;; Tubulin/FtsZ family, GTPase domain","Tubulin alpha-1 chain OS=Pisum sativum OX=3888 GN=TUBA1 PE=3 SV=1","Tubulin alpha chain (Fragment) OS=Mucuna pruriens OX=157652 GN=TUBA PE=3 SV=1","Z","Cytoskeleton","tubulin alpha-3 chain-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: structural molecule activity (GO:0005198);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; cellular component: supramolecular complex (GO:0099080);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","Phagosome (ko04145)"]
["c100867.graph_c2",70,6.12,76,6.5,68,5.86,193,20.3,235,29.9,218,23.11,1.52e-10,1.264398266,"up","--","--","Biological Process: formation of cytoplasmic translation initiation complex (GO:0001732);; Molecular Function: translation initiation factor activity (GO:0003743);; Cellular Component: eukaryotic 43S preinitiation complex (GO:0016282);; Cellular Component: eukaryotic 48S preinitiation complex (GO:0033290);; Cellular Component: eukaryotic translation initiation factor 3 complex, eIF3m (GO:0071541);; ","K15030|3.6e-153|oeu:111374566|K15030 translation initiation factor 3 subunit M | (RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit M","[R]","General function prediction only ","PCI domain;; eIF3 subunit M, C-terminal helix","--","Eukaryotic translation initiation factor 3 subunit M OS=Davidia involucrata OX=16924 GN=Din_042840 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit M [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840);; molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: cell part (GO:0044464)","--"]
["c102458.graph_c0",70,4.22,70,3.86,50,3.02,183,12.1,148,10.14,177,11.13,2.97e-07,1.084226141,"up","--","--","Biological Process: lipid catabolic process (GO:0016042);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; ","K01052|5.1e-60|oeu:111409272|K01052 lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13] | (RefSeq) triacylglycerol lipase 2-like isoform X1","[I]","Lipid transport and metabolism ","--","Triacylglycerol lipase 2 OS=Arabidopsis thaliana OX=3702 GN=LIP2 PE=2 SV=1","Lipase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a007222mg PE=3 SV=1","I","Lipid transport and metabolism","triacylglycerol lipase 2-like isoform X4 [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699);; molecular function: catalytic activity (GO:0003824)","Steroid biosynthesis (ko00100)"]
["c83790.graph_c0",27,1.82,37,2.59,35,2.29,99,6.83,85,6.33,139,9.06,1.96e-06,1.343558866,"up","[R]","General function prediction only ","Molecular Function: protein-arginine N-methyltransferase activity (GO:0016274);; ","K18477|3.5e-150|oeu:111389319|K18477 type IV protein arginine methyltransferase [EC:2.1.1.322] | (RefSeq) protein arginine N-methyltransferase 2 isoform X1","[E]","Amino acid transport and metabolism ","Ankyrin repeats (many copies);; Ankyrin repeats (3 copies);; Ankyrin repeats (many copies);; Ankyrin repeat;; Ankyrin repeat;; Methyltransferase domain","--","Protein arginine N-methyltransferase 2 OS=Solanum tuberosum OX=4113 GN=102604578 PE=4 SV=1","E","Amino acid transport and metabolism","protein arginine N-methyltransferase 2 isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c70592.graph_c0",6,1.89,8,2.34,0,0,127,41.13,119,44.29,136,43.55,1.61e-23,4.214052359,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c116508.graph_c0",159,3.08,188,3.44,176,3.38,664,12.96,798,17.73,919,17.99,4.02e-45,1.855070295,"up","[M]","Cell wall/membrane/envelope biogenesis ","Molecular Function: protein serine/threonine kinase activity (GO:0004674);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: integral component of membrane (GO:0016021);; ","K20718|8.4e-235|oeu:111398770|K20718 LRR receptor-like serine/threonine-protein kinase ERECTA [EC:2.7.11.1] | (RefSeq) LRR receptor-like serine/threonine-protein kinase ERECTA","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat;; Leucine rich repeat N-terminal domain;; Leucine Rich repeat;; Protein kinase domain;; Protein tyrosine and serine/threonine kinase","LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana OX=3702 GN=ERECTA PE=1 SV=1","Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03296 PE=3 SV=1","T","Signal transduction mechanisms","LRR receptor-like serine/threonine-protein kinase ERECTA [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016)"]
["c102193.graph_c0",262,11.69,272,11.84,278,12.95,713,33.76,684,37.64,760,36.15,1.87e-24,1.082433475,"up","--","--","Molecular Function: damaged DNA binding (GO:0003684);; Cellular Component: nucleoplasm (GO:0005654);; Cellular Component: cytosol (GO:0005829);; Biological Process: nucleotide-excision repair (GO:0006289);; Molecular Function: polyubiquitin modification-dependent protein binding (GO:0031593);; Cellular Component: host cell nucleus (GO:0042025);; Molecular Function: ubiquitin binding (GO:0043130);; Biological Process: proteasome-mediated ubiquitin-dependent protein catabolic process (GO:0043161);; ","K10839|4.1e-146|oeu:111372042|K10839 UV excision repair protein RAD23 | (RefSeq) ubiquitin receptor RAD23b-like isoform X1","[L]","Replication, recombination and repair ","XPC-binding domain;; Ubiquitin family;; UBA/TS-N domain;; Ubiquitin-2 like Rad60 SUMO-like;; CUE domain","Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3","Ubiquitin receptor RAD23 OS=Nicotiana tabacum OX=4097 GN=LOC107764209 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","ubiquitin receptor RAD23b-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: membrane-enclosed lumen (GO:0031974);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: response to stimulus (GO:0050896);; cellular component: other organism (GO:0044215);; cellular component: other organism part (GO:0044217)","Nucleotide excision repair (ko03420);; Protein processing in endoplasmic reticulum (ko04141)"]
["c111185.graph_c0",29,1.17,28,1.08,37,1.54,69,2.88,99,4.74,118,4.9,4.44e-05,1.245998345,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c103998.graph_c0",17095,570.39,17088,538.63,15910,546.81,3326,112.52,2274,88.27,2594,87.46,1.87e-84,-2.918239586,"down","[QV]","--","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; ","K20624|1.6e-257|oeu:111391342|K20624 12-hydroxyjasmonoyl-L-amino acid 12-hydroxylase / fatty acid hydroxylase [EC:1.14.14.49] | (RefSeq) cytochrome P450 94C1-like","[QI]","--","Cytochrome P450","Cytochrome P450 94C1 OS=Arabidopsis thaliana OX=3702 GN=CYP94C1 PE=1 SV=1","Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_027582 PE=3 SV=1","--","--","cytochrome P450 94C1-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c106173.graph_c1",607,22.45,619,21.8,576,22.25,3421,133.29,4151,187.95,4636,182.51,1.6e-157,2.433202921,"up","[QV]","--","Molecular Function: iron ion binding (GO:0005506);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705);; Molecular Function: heme binding (GO:0020037);; Molecular Function: secologanin synthase activity (GO:0050616);; Biological Process: oxidation-reduction process (GO:0055114);; ","K23809|1.6e-102|mtr:MTR_2g055470|K23809 cytochrome P450 family 72 subfamily A polypeptide 68 [EC:1.14.14.-] | (RefSeq) cytochrome P450 family 709 protein","[QI]","--","Cytochrome P450;; Cytochrome P450","Cytochrome P450 72A68 OS=Medicago truncatula OX=3880 GN=CYP72A68 PE=1 SV=1","Secologanin synthase OS=Olea europaea OX=4146 GN=SLS PE=2 SV=1","Q","Secondary metabolites biosynthesis, transport and catabolism","cytochrome P450 CYP72A219-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c91102.graph_c0",24,6.54,32,8.12,17,4.71,14,3.92,5,1.61,9,2.49,0.002450239,-1.579052467,"down","--","--","--","K09060|8.6e-06|oeu:111381229|K09060 plant G-box-binding factor | (RefSeq) bZIP transcription factor 68-like","--","--","--","--","--","--","--","--","--","--"]
["c113633.graph_c1",2527,38.65,3064,44.35,2839,44.75,716,11.23,773,13.89,800,12.53,7.23e-164,-2.197400463,"down","[Q]","Secondary metabolites biosynthesis, transport and catabolism ","Molecular Function: oxidoreductase activity (GO:0016491);; ","K00085|7.6e-118|mdm:103445158|K00085 aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200] | (RefSeq) S6PDH; NADP-dependent D-sorbitol-6-phosphate dehydrogenase","[R]","General function prediction only ","Aldo/keto reductase family","NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica OX=3750 GN=S6PDH PE=2 SV=1","NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Nelumbo nucifera OX=4432 GN=LOC104607499 PE=4 SV=1","S","Function unknown","NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: single-organism process (GO:0044699)","--"]
["c97081.graph_c0",958,32.5,989,31.78,953,33.34,679,23.56,533,21.18,568,19.64,1.83e-27,-1.024731715,"down","--","--","Cellular Component: chloroplast (GO:0009507);; Molecular Function: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity (GO:0030785);; Biological Process: methylation (GO:0032259);; ","K00592|2.4e-271|oeu:111398907|K00592 [ribulose-bisphosphate carboxylase]/[fructose-bisphosphate aldolase]-lysine N-methyltransferase [EC:2.1.1.127 2.1.1.259] | (RefSeq) ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic","[R]","General function prediction only ","Rubisco LSMT substrate-binding;; SET domain","Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RBCMT PE=2 SV=1","N-methyltransferase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29709 PE=4 SV=1","S","Function unknown","ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152)","--"]
["c96793.graph_c0",4,0.28,5,0.39,9,0.43,325,20.87,236,19.9,361,21.54,8.1e-48,5.142793626,"up","--","--","Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: plasma membrane (GO:0005886);; Cellular Component: integral component of plasma membrane (GO:0005887);; Cellular Component: cell cortex (GO:0005938);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to auxin (GO:0009733);; Biological Process: auxin-activated signaling pathway (GO:0009734);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Cellular Component: membrane (GO:0016020);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transmembrane transporter activity (GO:0022857);; Biological Process: signaling (GO:0023052);; Cellular Component: intrinsic component of membrane (GO:0031224);; Cellular Component: intrinsic component of plasma membrane (GO:0031226);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to chemical (GO:0042221);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete membrane part (GO:0044425);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete plasma membrane part (GO:0044459);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to auxin stimulus (GO:0071365);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Cellular Component: cell periphery (GO:0071944);; Cellular Component: cytoplasmic region (GO:0099568);; ","K17500|4.3e-10|nta:107765414|K17500 integrin-linked kinase-associated serine/threonine phosphatase 2C [EC:3.1.3.16] | (RefSeq) WAT1-related protein At3g18200-like","--","--","--","WAT1-related protein At3g28050 OS=Arabidopsis thaliana OX=3702 GN=At3g28050 PE=2 SV=1","WAT1-related protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17539 PE=3 SV=1","S","Function unknown","WAT1-related protein At3g28050-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: biological regulation (GO:0065007);; molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179)","--"]
["c115030.graph_c0",27,0.7,33,0.81,30,0.81,13,0.36,6,0.2,11,0.27,0.000119377,-1.800628275,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K18195|1.7e-105|ghi:107950013|K18195 rhamnogalacturonan endolyase [EC:4.2.2.23] | (RefSeq) uncharacterized protein LOC107950013","[R]","General function prediction only ","Retrotransposon gag protein;; gag-polypeptide of LTR copia-type;; Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2663 PE=4 SV=1","L","Replication, recombination and repair","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c101578.graph_c0",972,57.61,1084,60.84,962,58.75,351,21.31,288,20,370,22.33,5.27e-95,-1.90121819,"down","--","--","Biological Process: response to acid chemical (GO:0001101);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: plasma membrane (GO:0005886);; Biological Process: cell communication (GO:0007154);; Biological Process: signal transduction (GO:0007165);; Biological Process: biological_process (GO:0008150);; Biological Process: response to endogenous stimulus (GO:0009719);; Biological Process: response to hormone (GO:0009725);; Biological Process: response to abscisic acid (GO:0009737);; Biological Process: abscisic acid-activated signaling pathway (GO:0009738);; Biological Process: hormone-mediated signaling pathway (GO:0009755);; Biological Process: regulation of signal transduction (GO:0009966);; Biological Process: negative regulation of signal transduction (GO:0009968);; Biological Process: cellular process (GO:0009987);; Biological Process: response to organic substance (GO:0010033);; Biological Process: regulation of cell communication (GO:0010646);; Biological Process: negative regulation of cell communication (GO:0010648);; Cellular Component: membrane (GO:0016020);; Biological Process: regulation of signaling (GO:0023051);; Biological Process: signaling (GO:0023052);; Biological Process: negative regulation of signaling (GO:0023057);; Biological Process: cellular response to hormone stimulus (GO:0032870);; Biological Process: response to lipid (GO:0033993);; Biological Process: response to chemical (GO:0042221);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: negative regulation of biological process (GO:0048519);; Biological Process: negative regulation of cellular process (GO:0048523);; Biological Process: regulation of response to stimulus (GO:0048583);; Biological Process: negative regulation of response to stimulus (GO:0048585);; Biological Process: regulation of biological process (GO:0050789);; Biological Process: regulation of cellular process (GO:0050794);; Biological Process: response to stimulus (GO:0050896);; Biological Process: cellular response to stimulus (GO:0051716);; Biological Process: biological regulation (GO:0065007);; Biological Process: cellular response to chemical stimulus (GO:0070887);; Biological Process: cellular response to abscisic acid stimulus (GO:0071215);; Biological Process: cellular response to acid chemical (GO:0071229);; Biological Process: cellular response to organic substance (GO:0071310);; Biological Process: cellular response to lipid (GO:0071396);; Biological Process: cellular response to endogenous stimulus (GO:0071495);; Cellular Component: cell periphery (GO:0071944);; Biological Process: response to alcohol (GO:0097305);; Biological Process: cellular response to alcohol (GO:0097306);; Biological Process: regulation of brassinosteroid mediated signaling pathway (GO:1900457);; Biological Process: negative regulation of brassinosteroid mediated signaling pathway (GO:1900458);; Biological Process: response to oxygen-containing compound (GO:1901700);; Biological Process: cellular response to oxygen-containing compound (GO:1901701);; ","--","--","--","Remorin, C-terminal region","Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1","Remorin_C domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_001313 PE=3 SV=1","S","Function unknown","remorin 4.1-like [Olea europaea var. sylvestris]","biological process: response to stimulus (GO:0050896);; cellular component: cell (GO:0005623);; cellular component: membrane (GO:0016020);; cellular component: cell part (GO:0044464);; biological process: cellular process (GO:0009987);; biological process: signaling (GO:0023052);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c104872.graph_c0",1338,76.57,1353,69.49,1248,68.54,543,23,408,17.65,486,17.78,3.91e-93,-1.775665251,"down","--","--","--","--","--","--","--","--","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_033469 PE=4 SV=1","--","--","uncharacterized protein LOC111404401 [Olea europaea var. sylvestris]","--","--"]
["c102716.graph_c0",8,0.32,1,0.04,3,0.17,17,0.8,36,1.96,45,2.06,6.63e-05,2.409948765,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","--","--","Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_029175 PE=4 SV=1","--","--","uncharacterized protein LOC111381339 isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c102828.graph_c2",181,9.1,186,8.86,164,8.46,45,2.47,42,2.58,61,3.19,6.17e-25,-2.14344814,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c102558.graph_c0",59,2.6,47,1.96,47,2.14,10,0.45,10,0.52,8,0.36,9.74e-11,-2.639411842,"down","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: zinc ion binding (GO:0008270);; Biological Process: DNA integration (GO:0015074);; ","K11593|2.2e-54|dct:110097550|K11593 eukaryotic translation initiation factor 2C | (RefSeq) protein argonaute 1A-like","[R]","General function prediction only ","Integrase core domain","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19971 PE=4 SV=1","L","Replication, recombination and repair","hypothetical protein LSAT_6X86400 [Lactuca sativa]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c102773.graph_c1",205,10.69,220,10.21,225,11.77,573,28.81,652,37.74,786,39.73,3.45e-24,1.298013951,"up","[P]","Inorganic ion transport and metabolism ","Molecular Function: superoxide dismutase activity (GO:0004784);; Cellular Component: chloroplast nucleoid (GO:0042644);; Molecular Function: metal ion binding (GO:0046872);; ","K04564|3.1e-154|oeu:111403922|K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] | (RefSeq) superoxide dismutase [Fe], chloroplastic-like isoform X1","[P]","Inorganic ion transport and metabolism ","Iron/manganese superoxide dismutases, C-terminal domain;; Iron/manganese superoxide dismutases, alpha-hairpin domain","Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FSD2 PE=1 SV=1","Superoxide dismutase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a010591mg PE=3 SV=1","P","Inorganic ion transport and metabolism","superoxide dismutase [Fe], chloroplastic-like isoform X1 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; cellular component: cell (GO:0005623);; cellular component: nucleoid (GO:0009295);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; molecular function: binding (GO:0005488)","Peroxisome (ko04146)"]
["c113151.graph_c1",110,3.22,139,4.46,112,3.71,608,16.99,622,19.97,672,18.57,7.26e-56,2.067677818,"up","--","--","Molecular Function: DNA binding (GO:0003677);; Molecular Function: DNA-binding transcription factor activity (GO:0003700);; Cellular Component: nucleus (GO:0005634);; ","K09284|5.4e-139|oeu:111368963|K09284 AP2-like factor, euAP2 lineage | (RefSeq) ethylene-responsive transcription factor RAP2-7-like","--","--","AP2 domain","APETALA2-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-1 PE=2 SV=2","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22382 PE=4 SV=1","K","Transcription","ethylene-responsive transcription factor RAP2-7-like, partial [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: nucleic acid binding transcription factor activity (GO:0001071);; biological process: biological regulation (GO:0065007);; cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c117813.graph_c0",7,0.45,7,0.43,11,0.73,102,7.1,81,6.45,91,6.29,4.35e-15,2.996419735,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c97749.graph_c1",122,4.67,111,3.72,101,3.75,58,2.18,65,2.58,78,2.88,4.52e-06,-1.041708312,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; Biological Process: transmembrane transport (GO:0055085);; ","K24139|1.1e-145|tcc:18609738|K24139 auxin efflux carrier family protein | (RefSeq) protein PIN-LIKES 2","[S]","Function unknown ","Membrane transport protein;; Membrane transport protein","Protein PIN-LIKES 2 OS=Arabidopsis thaliana OX=3702 GN=PILS2 PE=2 SV=1","Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_032582 PE=4 SV=1","J","Translation, ribosomal structure and biogenesis","hypothetical protein F0562_032582 [Nyssa sinensis]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; biological process: localization (GO:0051179)","--"]
["c89800.graph_c0",257,23.21,305,25.95,301,27.96,854,78.85,741,78.39,804,73.85,4.05e-26,1.148076371,"up","--","--","Cellular Component: plasmodesma (GO:0009506);; Cellular Component: integral component of membrane (GO:0016021);; Cellular Component: anchored component of plasma membrane (GO:0046658);; ","--","--","--","Late embryogenesis abundant protein","NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1","LEA_2 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013838mg PE=4 SV=1","S","Function unknown","NDR1/HIN1-like protein 1 [Olea europaea var. sylvestris]","cellular component: cell junction (GO:0030054);; cellular component: symplast (GO:0055044);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464)","--"]
["c114051.graph_c0",23,2.25,37,2.92,42,3.11,0,0,0,0,0,0,9.55e-12,-5.518386512,"down","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: vacuole (GO:0005773);; Cellular Component: peroxisome (GO:0005777);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Molecular Function: beta-glucosidase activity (GO:0008422);; Biological Process: response to abiotic stimulus (GO:0009628);; Biological Process: flavonoid metabolic process (GO:0009812);; Molecular Function: glucosidase activity (GO:0015926);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Biological Process: pigment metabolic process (GO:0042440);; Cellular Component: microbody (GO:0042579);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cytoplasmic part (GO:0044444);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: anthocyanin-containing compound metabolic process (GO:0046283);; Biological Process: response to stimulus (GO:0050896);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: response to karrikin (GO:0080167);; Biological Process: carbohydrate derivative metabolic process (GO:1901135);; Biological Process: glycosyl compound metabolic process (GO:1901657);; ","K11352|8.9e-06|aof:109848001|K11352 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 | (RefSeq) probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12","[R]","General function prediction only ","--","--","Reverse transcriptase Ty1/copia-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_035575 PE=4 SV=1","G","Carbohydrate transport and metabolism","uncharacterized protein LOC111406695 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226);; biological process: metabolic process (GO:0008152);; biological process: response to stimulus (GO:0050896);; biological process: single-organism process (GO:0044699)","Oxidative phosphorylation (ko00190)"]
["c115765.graph_c0",28,10.16,12,4.33,18,6.32,268,15.81,226,14.15,292,18.2,4.56e-40,3.368660903,"up","--","--","Molecular Function: oxygen binding (GO:0019825);; Molecular Function: heme binding (GO:0020037);; ","K16302|1.2e-83|oeu:111381551|K16302 metal transporter CNNM | (RefSeq) DUF21 domain-containing protein At2g14520-like isoform X1","--","--","--","Two-on-two hemoglobin-3 OS=Arabidopsis thaliana OX=3702 GN=GLB3 PE=1 SV=1","two-on-two hemoglobin-3-like OS=Nicotiana tabacum OX=4097 GN=LOC107759471 PE=4 SV=1","S","Function unknown","DUF21 domain-containing protein At2g14520-like isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488)","--"]
["c104624.graph_c0",88,6.69,99,7.08,107,8.49,429,33.82,413,36.05,463,34.06,3.79e-34,1.814600254,"up","--","--","--","K00850|2.7e-14|brp:103868514|K00850 6-phosphofructokinase 1 [EC:2.7.1.11] | (RefSeq) ATP-dependent 6-phosphofructokinase 5, chloroplastic-like","--","--","Transcriptional activator;; Transcriptional activator","--","RAB6-interacting golgin OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13518 PE=3 SV=1","S","Function unknown","uncharacterized protein LOC111412793 [Olea europaea var. sylvestris]","--","Glycolysis / Gluconeogenesis (ko00010);; Pentose phosphate pathway (ko00030);; Fructose and mannose metabolism (ko00051);; Galactose metabolism (ko00052);; Carbon metabolism (ko01200);; Biosynthesis of amino acids (ko01230);; RNA degradation (ko03018)"]
["c117823.graph_c1",150,4.31,141,7.65,116,5.66,63,3.18,48,3.48,62,1.67,2.29e-12,-1.537759425,"down","--","--","--","K00012|1.7e-07|oeu:111371758|K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] | (RefSeq) UDP-glucose 6-dehydrogenase 3-like","--","--","--","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00070 PE=4 SV=1","L","Replication, recombination and repair","uncharacterized protein LOC105158097 [Sesamum indicum]","--","Pentose and glucuronate interconversions (ko00040);; Ascorbate and aldarate metabolism (ko00053);; Amino sugar and nucleotide sugar metabolism (ko00520)"]
["c110272.graph_c0",11,0.67,14,0.69,8,0.43,163,6.44,197,9.08,244,9.35,3.86e-33,3.762178456,"up","--","--","Molecular Function: RNA binding (GO:0003723);; Molecular Function: RNA-directed 5'-3' RNA polymerase activity (GO:0003968);; Biological Process: gene silencing by RNA (GO:0031047);; ","K11699|5.2e-276|oeu:111407880|K11699 RNA-dependent RNA polymerase [EC:2.7.7.48] | (RefSeq) probable RNA-dependent RNA polymerase 5 isoform X1","[A]","RNA processing and modification ","RNA dependent RNA polymerase","Probable RNA-dependent RNA polymerase 5 OS=Arabidopsis thaliana OX=3702 GN=RDR5 PE=2 SV=2","RNA-dependent RNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13717 PE=3 SV=1","A","RNA processing and modification","probable RNA-dependent RNA polymerase 5 isoform X1 [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: biological regulation (GO:0065007)","--"]
["c92109.graph_c0",8,0.81,11,1.09,6,0.71,306,34.37,292,37.85,330,37.86,1.81e-52,4.752672041,"up","--","--","Molecular Function: voltage-gated chloride channel activity (GO:0005247);; Cellular Component: integral component of membrane (GO:0016021);; ","K05016|2.3e-63|oeu:111409809|K05016 chloride channel 7 | (RefSeq) chloride channel protein CLC-c-like","[P]","Inorganic ion transport and metabolism ","--","Chloride channel protein CLC-c OS=Arabidopsis thaliana OX=3702 GN=CLC-C PE=1 SV=1","CLC-1a OS=Nicotiana benthamiana OX=4100 GN=CLC-1a PE=2 SV=1","P","Inorganic ion transport and metabolism","chloride channel protein CLC-c-like [Olea europaea var. sylvestris]","molecular function: transporter activity (GO:0005215);; biological process: localization (GO:0051179);; biological process: biological regulation (GO:0065007);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c94891.graph_c0",1,0.05,6,0.29,1,0.05,42,2.22,34,2.06,52,2.73,1.48e-08,3.291185789,"up","--","--","Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: DNA integration (GO:0015074);; ","K23288|2.5e-126|gra:105761952|K23288 syndetin | (RefSeq) uncharacterized LOC105761952","[R]","General function prediction only ","Reverse transcriptase (RNA-dependent DNA polymerase)","Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1","Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2046 PE=4 SV=1","--","--","Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]","molecular function: binding (GO:0005488);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c99590.graph_c0",3,0.1,0,0,2,0.08,74,2.69,59,2.49,69,2.52,3.19e-14,4.428608864,"up","--","--","--","--","[I]","Lipid transport and metabolism ","--","--","SEC14 cytosolic factor / phosphoglyceride transfer family protein OS=Ipomoea nil OX=35883 GN=In32 PE=2 SV=1","I","Lipid transport and metabolism","SEC14 cytosolic factor-like [Olea europaea var. sylvestris]","--","--"]
["c95968.graph_c1",346,14.89,435,18.13,384,17.1,3,0.14,0,0,0,0,8.27e-47,-7.833210706,"down","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K13420|3.5e-37|oeu:111375087|K13420 LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1] | (RefSeq) probable LRR receptor-like serine/threonine-protein kinase At3g47570","--","--","Leucine rich repeat;; Leucine Rich repeats (2 copies);; Leucine Rich Repeat","--","LRRNT_2 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_008524 PE=4 SV=1","T","Signal transduction mechanisms","probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","MAPK signaling pathway - plant (ko04016);; Plant-pathogen interaction (ko04626)"]
["c113790.graph_c0",16,1.21,25,1.12,19,1.38,109,9.57,62,6.09,92,7.3,1.39e-07,1.749287436,"up","--","--","Cellular Component: chloroplast (GO:0009507);; Cellular Component: thylakoid lumen (GO:0031977);; ","--","--","--","--","Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g24930 PE=1 SV=1","Thylakoid lumenal protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18014 PE=4 SV=1","S","Function unknown","thylakoid lumenal 17.9 kDa protein, chloroplastic [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464)","--"]
["c105346.graph_c0",7,0.18,4,0.1,4,0.11,29,0.76,29,0.87,22,0.57,0.000769925,1.90996017,"up","--","--","Molecular Function: molecular_function (GO:0003674);; Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: catalytic activity (GO:0003824);; Molecular Function: nuclease activity (GO:0004518);; Molecular Function: endonuclease activity (GO:0004519);; Molecular Function: binding (GO:0005488);; Cellular Component: cellular_component (GO:0005575);; Cellular Component: intracellular (GO:0005622);; Cellular Component: obsolete cell (GO:0005623);; Biological Process: nucleobase-containing compound metabolic process (GO:0006139);; Biological Process: cellular aromatic compound metabolic process (GO:0006725);; Biological Process: nitrogen compound metabolic process (GO:0006807);; Biological Process: biological_process (GO:0008150);; Biological Process: metabolic process (GO:0008152);; Biological Process: RNA modification (GO:0009451);; Biological Process: cellular process (GO:0009987);; Biological Process: RNA metabolic process (GO:0016070);; Molecular Function: hydrolase activity (GO:0016787);; Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);; Biological Process: cellular nitrogen compound metabolic process (GO:0034641);; Biological Process: macromolecule metabolic process (GO:0043170);; Cellular Component: organelle (GO:0043226);; Cellular Component: membrane-bounded organelle (GO:0043227);; Cellular Component: intracellular organelle (GO:0043229);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: macromolecule modification (GO:0043412);; Biological Process: cellular metabolic process (GO:0044237);; Biological Process: primary metabolic process (GO:0044238);; Cellular Component: obsolete intracellular part (GO:0044424);; Cellular Component: obsolete cell part (GO:0044464);; Biological Process: heterocycle metabolic process (GO:0046483);; Biological Process: organic substance metabolic process (GO:0071704);; Biological Process: nucleic acid metabolic process (GO:0090304);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; Molecular Function: organic cyclic compound binding (GO:0097159);; Biological Process: organic cyclic compound metabolic process (GO:1901360);; Molecular Function: heterocyclic compound binding (GO:1901363);; ","--","--","--","PPR repeat family;; PPR repeat;; Pentatricopeptide repeat domain;; PPR repeat;; Pentacotripeptide-repeat region of PRORP","Pentatricopeptide repeat-containing protein At5g66631 OS=Arabidopsis thaliana OX=3702 GN=At5g66631 PE=2 SV=1","Pentatricopeptide repeat protein OS=Salvia miltiorrhiza OX=226208 PE=2 SV=1","S","Function unknown","pentatricopeptide repeat-containing protein At5g66631-like [Olea europaea var. sylvestris]","molecular function: binding (GO:0005488);; molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; cellular component: cell (GO:0005623);; cellular component: cell part (GO:0044464);; cellular component: organelle (GO:0043226)","--"]
["c115661.graph_c0",48,1.5,38,1.89,64,2.68,19,0.65,21,0.82,43,2,0.002404613,-1.155872089,"down","--","--","--","K10581|4.3e-06|oeu:111387120|K10581 ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24] | (RefSeq) probable ubiquitin-conjugating enzyme E2 25 isoform X1","--","--","--","--","--","--","--","--","--","Ubiquitin mediated proteolysis (ko04120)"]
["c94845.graph_c0",8,0.42,10,0.53,12,0.64,67,3.86,63,4.11,94,5.49,2.01e-10,2.45974111,"up","[H]","Coenzyme transport and metabolism ","Molecular Function: methyltransferase activity (GO:0008168);; Cellular Component: integral component of membrane (GO:0016021);; ","--","--","--","Methyltransferase domain;; Methyltransferase domain;; Methyltransferase domain","--","Methyltransf_11 domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04668 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111395692 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c87584.graph_c0",61,5.1,36,2.84,41,3.52,183,15.78,169,16.73,180,15.49,4.65e-12,1.600142363,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c98865.graph_c0",122,10.8,132,11.43,145,12.48,82,6.76,56,7.08,65,6.44,6.38e-09,-1.285355523,"down","--","--","--","--","--","--","Protein of unknown function (DUF3245)","--","Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_21153 PE=4 SV=1","S","Function unknown","uncharacterized protein LOC111390101 isoform X1 [Olea europaea var. sylvestris]","--","--"]
["c71581.graph_c0",37,5.74,59,9.95,37,7.7,3,0.52,11,1.74,11,1.35,1.93e-08,-2.562122508,"down","--","--","Molecular Function: RNA binding (GO:0003723);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: ribosome biogenesis (GO:0042254);; ","K02936|3.2e-74|ppp:112278001|K02936 large subunit ribosomal protein L7Ae | (RefSeq) 60S ribosomal protein L7a-2-like","[J]","Translation, ribosomal structure and biogenesis ","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family","60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1","60S ribosomal protein L7a OS=Anthurium amnicola OX=1678845 GN=RPL7A_5 PE=3 SV=1","J","Translation, ribosomal structure and biogenesis","60S ribosomal protein L7a [Zea mays]","molecular function: binding (GO:0005488);; cellular component: cell (GO:0005623);; cellular component: macromolecular complex (GO:0032991);; cellular component: organelle (GO:0043226);; cellular component: organelle part (GO:0044422);; cellular component: cell part (GO:0044464);; biological process: cellular component organization or biogenesis (GO:0071840)","Ribosome (ko03010)"]
["c102121.graph_c1",31,4.65,53,7.15,40,6.13,24,3.68,19,3.29,18,2.6,0.000877398,-1.287692093,"down","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107183.graph_c0",10,0.42,2,0.08,6,0.28,37,1.63,78,4.19,61,2.81,1.77e-08,2.767299888,"up","[G]","Carbohydrate transport and metabolism ","Molecular Function: pectate lyase activity (GO:0030570);; Biological Process: pectin catabolic process (GO:0045490);; Molecular Function: metal ion binding (GO:0046872);; ","K01728|8.4e-249|oeu:111365266|K01728 pectate lyase [EC:4.2.2.2] | (RefSeq) probable pectate lyase 5","--","--","Pectate lyase","Probable pectate lyase 12 OS=Arabidopsis thaliana OX=3702 GN=At3g53190 PE=2 SV=2","Pectate lyase OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a004990mg PE=3 SV=1","G","Carbohydrate transport and metabolism","probable pectate lyase 5 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; molecular function: binding (GO:0005488)","Pentose and glucuronate interconversions (ko00040)"]
["c56872.graph_c0",0,0,0,0,0,0,16,2.48,22,3.91,23,3.54,7.87e-07,4.338483399,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]
["c107626.graph_c1",0,0,0,0,0,0,16,1.53,15,1.64,27,2.56,1.56e-06,4.250828335,"up","--","--","Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; Molecular Function: zinc ion binding (GO:0008270);; ","K17604|1.3e-56|pmum:103328107|K17604 zinc finger SWIM domain-containing protein 3 | (RefSeq) protein FAR1-RELATED SEQUENCE 8","--","--","MULE transposase domain;; FAR1 DNA-binding domain","Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1","Protein FAR1-RELATED SEQUENCE OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS9347 PE=3 SV=1","S","Function unknown","protein FAR1-RELATED SEQUENCE 5-like [Olea europaea var. sylvestris]","cellular component: cell (GO:0005623);; cellular component: organelle (GO:0043226);; cellular component: cell part (GO:0044464);; biological process: biological regulation (GO:0065007);; molecular function: binding (GO:0005488)","--"]
["c98785.graph_c2",295,211.49,323,214.7,298,216.34,70,51.67,56,49.71,85,64.01,2.49e-47,-2.426553514,"down","--","--","Molecular Function: catalytic activity (GO:0003824);; ","K22133|1.2e-25|oeu:111390788|K22133 oxalate---CoA ligase [EC:6.2.1.8] | (RefSeq) oxalate--CoA ligase-like","[I]","Lipid transport and metabolism ","AMP-binding enzyme","Oxalate--CoA ligase OS=Arabidopsis thaliana OX=3702 GN=AAE3 PE=1 SV=1","4-coumarate--CoA ligase OS=Fraxinus mandshurica OX=56029 GN=4CL13 PE=2 SV=1","I","Lipid transport and metabolism","4CL13 [Fraxinus mandshurica]","molecular function: catalytic activity (GO:0003824)","Glyoxylate and dicarboxylate metabolism (ko00630)"]
["c92815.graph_c0",1291,149.57,1111,122.55,1004,120.17,330,40.98,401,56.25,400,49.19,1.62e-68,-1.902525628,"down","--","--","--","--","--","--","ABA/WDS induced protein","Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1","Abscisic stress ripening protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0959350 PE=3 SV=1","--","--","Abscisic stress ripening protein, putative [Ricinus communis]","--","--"]
["c103455.graph_c0",62,3.16,45,2.32,57,3.11,347,15.71,297,14.75,299,11.62,3.18e-30,2.178294455,"up","--","--","Cellular Component: integral component of membrane (GO:0016021);; ","K15285|2.0e-16|ghi:107963028|K15285 solute carrier family 35, member E3 | (RefSeq) uncharacterized protein LOC107963028","[GE]","--","--","Nucleotide-sugar uncharacterized transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At5g57100 PE=2 SV=1","TPT domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_16199 PE=4 SV=1","--","--","nucleotide-sugar uncharacterized transporter 2-like isoform X1 [Olea europaea var. sylvestris]","cellular component: membrane (GO:0016020);; cellular component: membrane part (GO:0044425)","--"]
["c108284.graph_c0",19,1.45,23,1.44,14,1.29,68,5.77,75,6.52,77,6.89,2.02e-06,1.607349324,"up","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Molecular Function: metal ion binding (GO:0046872);; ","K01102|8.7e-83|oeu:111388737|K01102 pyruvate dehydrogenase phosphatase [EC:3.1.3.43] | (RefSeq) probable protein phosphatase 2C 63","[T]","Signal transduction mechanisms ","Protein phosphatase 2C","Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana OX=3702 GN=At4g33920 PE=2 SV=1","Protein-serine/threonine phosphatase OS=Striga asiatica OX=4170 GN=STAS_13276 PE=3 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 63 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; molecular function: binding (GO:0005488)","--"]
["c107828.graph_c0",6710,230.23,7502,243.55,6878,243.14,3889,136.43,2986,119.96,3373,117.77,7.96e-89,-1.36312975,"down","[O]","Posttranslational modification, protein turnover, chaperones ","Biological Process: iron-sulfur cluster assembly (GO:0016226);; ","K09015|2.1e-17|ppp:112289924|K09015 Fe-S cluster assembly protein SufD | (RefSeq) protein ABCI7, chloroplastic-like isoform X1","--","--","SUF system FeS cluster assembly, SufBD","UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI8 PE=2 SV=1","Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06153 PE=3 SV=1","O","Posttranslational modification, protein turnover, chaperones","UPF0051 protein ABCI8, chloroplastic-like [Olea europaea var. sylvestris]","biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: cellular component organization or biogenesis (GO:0071840)","--"]
["c46315.graph_c0",0,0,0,0,4,0.93,112,26.12,111,29.72,112,25.88,2.22e-20,5.333588392,"up","[O]","Posttranslational modification, protein turnover, chaperones ","Molecular Function: peroxidase activity (GO:0004601);; Biological Process: cell redox homeostasis (GO:0045454);; Molecular Function: peroxiredoxin activity (GO:0051920);; ","K24140|7.2e-22|oeu:111366379|K24140 glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25] | (RefSeq) peroxiredoxin-2-like","[O]","Posttranslational modification, protein turnover, chaperones ","--","Peroxiredoxin-2C OS=Oryza sativa subsp. japonica OX=39947 GN=PRXIIC PE=1 SV=1","Glutaredoxin-dependent peroxiredoxin OS=Nelumbo nucifera OX=4432 GN=TDP PE=2 SV=1","O","Posttranslational modification, protein turnover, chaperones","peroxiredoxin-2-like [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; molecular function: antioxidant activity (GO:0016209);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987);; biological process: single-organism process (GO:0044699);; biological process: response to stimulus (GO:0050896);; biological process: detoxification (GO:0098754);; biological process: biological regulation (GO:0065007)","--"]
["c104363.graph_c0",22,3.31,38,5.2,28,3.91,14,2.17,11,1.95,16,2.86,0.0028871,-1.348837847,"down","--","--","--","--","--","--","--","--","--","--","--","TATA box-binding protein-associated factor RNA polymerase I subunit B-like [Olea europaea var. sylvestris]","--","--"]
["c107527.graph_c1",62,8.89,68,9.52,59,8.87,205,31.01,207,36.07,201,30.43,5.1e-12,1.36489531,"up","--","--","--","--","--","--","--","--","--","--","--","phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Olea europaea var. sylvestris]","--","--"]
["c110250.graph_c0",1350,67.3,1383,66.08,1257,66.93,713,37.44,633,37.7,693,36.49,1.59e-65,-1.28866058,"down","--","--","Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; ","K17506|3.3e-10|nta:107811819|K17506 protein phosphatase 1L [EC:3.1.3.16] | (RefSeq) probable protein phosphatase 2C 74","[T]","Signal transduction mechanisms ","Protein phosphatase 2C","Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana OX=3702 GN=At1g16220 PE=2 SV=1","PPM-type phosphatase domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_28485 PE=4 SV=1","T","Signal transduction mechanisms","probable protein phosphatase 2C 6 [Olea europaea var. sylvestris]","molecular function: catalytic activity (GO:0003824);; biological process: metabolic process (GO:0008152);; biological process: cellular process (GO:0009987)","--"]
["c90612.graph_c0",189,25.59,188,24.28,149,20.79,79,11.12,87,13.54,87,12.2,9.72e-13,-1.360085136,"down","--","--","Biological Process: lipid transport (GO:0006869);; Molecular Function: lipid binding (GO:0008289);; ","--","--","--","Protease inhibitor/seed storage/LTP family;; Probable lipid transfer","Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE=3 SV=1","Non-specific lipid-transfer protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16831 PE=3 SV=1","G","Carbohydrate transport and metabolism","non-specific lipid-transfer protein 8-like [Olea europaea var. sylvestris]","biological process: single-organism process (GO:0044699);; biological process: localization (GO:0051179);; molecular function: binding (GO:0005488)","--"]
["c109507.graph_c0",1,0.04,3,0.11,0,0,31,1.26,24,1.15,33,1.32,4.84e-07,3.465725722,"up","--","--","--","--","--","--","--","--","--","--","--","--","--","--"]